Citrus Sinensis ID: 025121
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 257 | 2.2.26 [Sep-21-2011] | |||||||
| Q9QYL8 | 231 | Acyl-protein thioesterase | yes | no | 0.782 | 0.870 | 0.36 | 9e-30 | |
| Q9WTL7 | 231 | Acyl-protein thioesterase | yes | no | 0.782 | 0.870 | 0.36 | 9e-30 | |
| O95372 | 231 | Acyl-protein thioesterase | yes | no | 0.782 | 0.870 | 0.36 | 3e-29 | |
| Q54T49 | 226 | Acyl-protein thioesterase | yes | no | 0.809 | 0.920 | 0.303 | 5e-27 | |
| Q6CGL4 | 227 | Acyl-protein thioesterase | yes | no | 0.789 | 0.894 | 0.318 | 5e-25 | |
| Q5RBR7 | 230 | Acyl-protein thioesterase | no | no | 0.805 | 0.9 | 0.331 | 8e-25 | |
| O75608 | 230 | Acyl-protein thioesterase | no | no | 0.805 | 0.9 | 0.331 | 1e-24 | |
| O77821 | 230 | Acyl-protein thioesterase | no | no | 0.805 | 0.9 | 0.327 | 2e-24 | |
| P97823 | 230 | Acyl-protein thioesterase | no | no | 0.805 | 0.9 | 0.327 | 2e-24 | |
| P0CL94 | 238 | Acyl-protein thioesterase | yes | no | 0.805 | 0.869 | 0.297 | 3e-24 |
| >sp|Q9QYL8|LYPA2_RAT Acyl-protein thioesterase 2 OS=Rattus norvegicus GN=Lypla2 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 130 bits (327), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 120/225 (53%), Gaps = 24/225 (10%)
Query: 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGEL 91
+ A +++LHGLGD G SW+ L ++ LP++K+ICP AP PV + +WFD+ L
Sbjct: 22 RETAAVIFLHGLGDTGHSWADALSTIRLPHVKYICPHAPRIPVTLNMKMVMPSWFDLMGL 81
Query: 92 SDDGPEDWEGLDASAAHIANLLSTE-----PADVKVGIGGFSMGAAVALYSATCCALGRY 146
S D PED G+ +A +I L+ E PA+ ++ +GGFS G A++LY+A C
Sbjct: 82 SPDAPEDEAGIKKAAENIKALIEHEMKNGIPAN-RIVLGGFSQGGALSLYTALTC----- 135
Query: 147 GNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKY 206
P+ L +V LS WLP RN GS A L IL HG D +VP ++
Sbjct: 136 ----PH--PLAGIVALSCWLPLHRNFPQAANGS------AKDLAILQCHGELDPMVPVRF 183
Query: 207 GEKSANCL-SISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250
G +A L ++ + FK++ G+ H + P+EM V +L L
Sbjct: 184 GALTAEKLRTVVTPARVQFKTYPGVMHSSCPQEMAAVKEFLEKLL 228
|
May hydrolyze fatty acids from S-acylated cysteine residues in proteins such as trimeric G alpha proteins or HRAS (By similarity). Has lysophospholipase activity. Rattus norvegicus (taxid: 10116) EC: 3EC: .EC: 1EC: .EC: 2EC: .EC: - |
| >sp|Q9WTL7|LYPA2_MOUSE Acyl-protein thioesterase 2 OS=Mus musculus GN=Lypla2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 130 bits (327), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 120/225 (53%), Gaps = 24/225 (10%)
Query: 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGEL 91
+ A +++LHGLGD G SW+ L ++ LP++K+ICP AP PV + +WFD+ L
Sbjct: 22 RETAAVIFLHGLGDTGHSWADALSTIRLPHVKYICPHAPRIPVTLNMKMVMPSWFDLMGL 81
Query: 92 SDDGPEDWEGLDASAAHIANLLSTE-----PADVKVGIGGFSMGAAVALYSATCCALGRY 146
S D PED G+ +A +I L+ E PA+ ++ +GGFS G A++LY+A C
Sbjct: 82 SPDAPEDEAGIKKAAENIKALIEHEMKNGIPAN-RIVLGGFSQGGALSLYTALTC----- 135
Query: 147 GNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKY 206
P+ L +V LS WLP RN GS A L IL HG D +VP ++
Sbjct: 136 ----PH--PLAGIVALSCWLPLHRNFPQAANGS------AKDLAILQCHGELDPMVPVRF 183
Query: 207 GEKSANCL-SISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250
G +A L ++ + FK++ G+ H + P+EM V +L L
Sbjct: 184 GALTAEKLRTVVTPARVQFKTYPGVMHSSCPQEMAAVKEFLEKLL 228
|
May hydrolyze fatty acids from S-acylated cysteine residues in proteins such as trimeric G alpha proteins or HRAS (By similarity). Has lysophospholipase activity. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: - |
| >sp|O95372|LYPA2_HUMAN Acyl-protein thioesterase 2 OS=Homo sapiens GN=LYPLA2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 119/225 (52%), Gaps = 24/225 (10%)
Query: 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGEL 91
+ A +++LHGLGD G SW+ L ++ LP++K+ICP AP PV + +WFD+ L
Sbjct: 22 RETAAVIFLHGLGDTGHSWADALSTIRLPHVKYICPHAPRIPVTLNMKMVMPSWFDLMGL 81
Query: 92 SDDGPEDWEGLDASAAHIANLLSTE-----PADVKVGIGGFSMGAAVALYSATCCALGRY 146
S D PED G+ +A +I L+ E PA+ ++ +GGFS G A++LY+A C
Sbjct: 82 SPDAPEDEAGIKKAAENIKALIEHEMKNGIPAN-RIVLGGFSQGGALSLYTALTC----- 135
Query: 147 GNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKY 206
P+ L +V LS WLP R GS A L IL HG D +VP ++
Sbjct: 136 ----PH--PLAGIVALSCWLPLHRAFPQAANGS------AKDLAILQCHGELDPMVPVRF 183
Query: 207 GEKSANCL-SISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250
G +A L S+ + FK++ G+ H + P+EM V +L L
Sbjct: 184 GALTAEKLRSVVTPARVQFKTYPGVMHSSCPQEMAAVKEFLEKLL 228
|
May hydrolyze fatty acids from S-acylated cysteine residues in proteins such as trimeric G alpha proteins or HRAS. Has lysophospholipase activity. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: - |
| >sp|Q54T49|APT11_DICDI Acyl-protein thioesterase 1 homolog 1 OS=Dictyostelium discoideum GN=DDB_G0282005 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 121 bits (304), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 124/237 (52%), Gaps = 29/237 (12%)
Query: 23 RTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPN---IKWICPTAPTRPVAILGG 79
+++ + H AT+++ HGLGD+G+ W +++E + N I++ICP AP + V + GG
Sbjct: 8 NSYIQKEITTHSATVIFSHGLGDSGAGWIEVMEEIQSRNNGHIRFICPNAPIQAVTLNGG 67
Query: 80 FPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPADVKVG-----IGGFSMGAAVA 134
F +W+D+ LS G ED +D S I ++ E + K+ IGGFS GAA++
Sbjct: 68 FKMPSWYDIKSLSSRGDEDPAQVDESKNIIETIIKHEMEEEKIPAERIIIGGFSQGAALS 127
Query: 135 LYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP-GSRNLRNKIEGSHEAARRAASLPILL 193
LY+ + G + LSG+LP ++ + N + P+L+
Sbjct: 128 LYTFYSQTETKLG----------GCIALSGYLPLATKFVANSLNKEQ---------PLLM 168
Query: 194 THGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250
HG CD VV +++G+ S + L G F + +GLGH++ P+E+D + +++ L
Sbjct: 169 IHGDCDQVVRHQWGKLSFDHLKSQGING-EFITLKGLGHHSSPEEIDLMTKFISKTL 224
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Hydrolyzes fatty acids from S-acylated cysteine residues in proteins with a strong preference for palmitoylated G-alpha proteins over other acyl substrates. Dictyostelium discoideum (taxid: 44689) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: - |
| >sp|Q6CGL4|APTH1_YARLI Acyl-protein thioesterase 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0A18337g PE=3 SV=1 | Back alignment and function description |
|---|
Score = 114 bits (286), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 125/232 (53%), Gaps = 29/232 (12%)
Query: 30 KGKHQATIVWLHGLGDNGSSWSQLLE----SLPLPNIKWICPTAPTRPVAILGGFPCTAW 85
K H AT+++LHGLGD+G+ W L E + L ++K+I P AP +PV++ G +W
Sbjct: 12 KAAHTATVIFLHGLGDSGAGWMFLAEEARKAQRLNHVKFIFPEAPQQPVSLNFGMRMPSW 71
Query: 86 FDVGELSD-DGPEDWEGLDASAAHIANLLSTE-----PADVKVGIGGFSMGAAVALYSAT 139
+D+ EL++ + +D EG+ S + +L+ E PA+ ++ IGGFS G AV+L AT
Sbjct: 72 YDIKELANVNAAQDQEGILESVGRLESLIKEETDAGVPAN-RIVIGGFSQGCAVSL--AT 128
Query: 140 CCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCD 199
C L +VGLSG++P +++ I H + P+ L HG D
Sbjct: 129 GCLT---------QTKLGGIVGLSGYVP----IKDYILSQHNTTNQ--DTPMFLAHGTAD 173
Query: 200 DVVPYKYGEKSAN-CLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250
V+ + YG+ S + ++ F+++ + +EGL H +E+ ++ NWL +
Sbjct: 174 QVIRFDYGKLSRDFIINELKFKNVDWHQYEGLTHSCGFEEISDILNWLEENI 225
|
Hydrolyzes fatty acids from S-acylated cysteine residues in proteins with a strong preference for palmitoylated G-alpha proteins over other acyl substrates. Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: - |
| >sp|Q5RBR7|LYPA1_PONAB Acyl-protein thioesterase 1 OS=Pongo abelii GN=LYPLA1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 114 bits (284), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 118/232 (50%), Gaps = 25/232 (10%)
Query: 26 VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAW 85
+V K A +++LHGLGD G W++ + +IK+ICP AP RPV + +W
Sbjct: 13 IVPAARKATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNMAMPSW 72
Query: 86 FDVGELSDDGPEDWEGLDASAAHIANLLSTE-----PADVKVGIGGFSMGAAVALYSATC 140
FD+ LS D ED G+ +A +I L+ E P++ ++ +GGFS G A++LY+A
Sbjct: 73 FDIIGLSPDSQEDESGIKQAAENIKALIDQEVKNGIPSN-RIILGGFSQGGALSLYTA-- 129
Query: 141 CALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI-EGSHEAARRAASLPILLTHGLCD 199
+ L V LS WLP LR +G A R S IL HG CD
Sbjct: 130 ---------LTTQQKLAGVTALSCWLP----LRASFPQGPIGGANRDIS--ILQCHGDCD 174
Query: 200 DVVPYKYGEKSANCL-SISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250
+VP +G + L ++ ++TFK++EG+ H + +EM +V ++ L
Sbjct: 175 PLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEMMDVKQFIDKLL 226
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Hydrolyzes fatty acids from S-acylated cysteine residues in proteins such as trimeric G alpha proteins or HRAS. Has depalmitoylating activity and also low lysophospholipase activity. Pongo abelii (taxid: 9601) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: - |
| >sp|O75608|LYPA1_HUMAN Acyl-protein thioesterase 1 OS=Homo sapiens GN=LYPLA1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 118/232 (50%), Gaps = 25/232 (10%)
Query: 26 VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAW 85
+V K A +++LHGLGD G W++ + +IK+ICP AP RPV + +W
Sbjct: 13 IVPAARKATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSW 72
Query: 86 FDVGELSDDGPEDWEGLDASAAHIANLLSTE-----PADVKVGIGGFSMGAAVALYSATC 140
FD+ LS D ED G+ +A +I L+ E P++ ++ +GGFS G A++LY+A
Sbjct: 73 FDIIGLSPDSQEDESGIKQAAENIKALIDQEVKNGIPSN-RIILGGFSQGGALSLYTA-- 129
Query: 141 CALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI-EGSHEAARRAASLPILLTHGLCD 199
+ L V LS WLP LR +G A R S IL HG CD
Sbjct: 130 ---------LTTQQKLAGVTALSCWLP----LRASFPQGPIGGANRDIS--ILQCHGDCD 174
Query: 200 DVVPYKYGEKSANCL-SISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250
+VP +G + L ++ ++TFK++EG+ H + +EM +V ++ L
Sbjct: 175 PLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEMMDVKQFIDKLL 226
|
Hydrolyzes fatty acids from S-acylated cysteine residues in proteins such as trimeric G alpha proteins or HRAS. Has depalmitoylating activity and also low lysophospholipase activity. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: - |
| >sp|O77821|LYPA1_RABIT Acyl-protein thioesterase 1 OS=Oryctolagus cuniculus GN=LYPLA1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 118/232 (50%), Gaps = 25/232 (10%)
Query: 26 VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAW 85
VV K A +++LHGLGD G W++ + P+IK+ICP AP PV + +W
Sbjct: 13 VVPAARKATAAVIFLHGLGDTGHGWAEAFAGIKSPHIKYICPHAPVMPVTLNMNMAMPSW 72
Query: 86 FDVGELSDDGPEDWEGLDASAAHIANLLSTE-----PADVKVGIGGFSMGAAVALYSATC 140
FD+ LS D ED G+ +A + L+ E P++ ++ +GGFS G A++LY+A
Sbjct: 73 FDIVGLSPDSQEDESGIKQAAETVKALIDQEVKNGIPSN-RIILGGFSQGGALSLYTA-- 129
Query: 141 CALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI-EGSHEAARRAASLPILLTHGLCD 199
+ L V LS WLP LR +G +A R S +L HG CD
Sbjct: 130 ---------LTTQQKLAGVTALSCWLP----LRASFSQGPINSANRDIS--VLQCHGDCD 174
Query: 200 DVVPYKYGEKSANCL-SISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250
+VP +G + L ++ ++TFK +EG+ H + +EM +V +++ L
Sbjct: 175 PLVPLMFGSLTVERLKALINPANVTFKIYEGMMHSSCQQEMMDVKHFIDKLL 226
|
Hydrolyzes fatty acids from S-acylated cysteine residues in proteins such as trimeric G alpha proteins or HRAS. Has depalmitoylating activity and also low lysophospholipase activity. Oryctolagus cuniculus (taxid: 9986) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: - |
| >sp|P97823|LYPA1_MOUSE Acyl-protein thioesterase 1 OS=Mus musculus GN=Lypla1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 118/232 (50%), Gaps = 25/232 (10%)
Query: 26 VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAW 85
VV K A +++LHGLGD G W++ + P+IK+ICP AP PV + +W
Sbjct: 13 VVPAARKATAAVIFLHGLGDTGHGWAEAFAGIKSPHIKYICPHAPVMPVTLNMNMAMPSW 72
Query: 86 FDVGELSDDGPEDWEGLDASAAHIANLLSTE-----PADVKVGIGGFSMGAAVALYSATC 140
FD+ LS D ED G+ +A + L+ E P++ ++ +GGFS G A++LY+A
Sbjct: 73 FDIVGLSPDSQEDESGIKQAAETVKALIDQEVKNGIPSN-RIILGGFSQGGALSLYTA-- 129
Query: 141 CALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI-EGSHEAARRAASLPILLTHGLCD 199
+ L V LS WLP LR +G +A R S +L HG CD
Sbjct: 130 ---------LTTQQKLAGVTALSCWLP----LRASFSQGPINSANRDIS--VLQCHGDCD 174
Query: 200 DVVPYKYGEKSANCL-SISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250
+VP +G + L ++ ++TFK +EG+ H + +EM +V +++ L
Sbjct: 175 PLVPLMFGSLTVERLKALINPANVTFKIYEGMMHSSCQQEMMDVKHFIDKLL 226
|
Hydrolyzes fatty acids from S-acylated cysteine residues in proteins such as trimeric G alpha proteins or HRAS. Has depalmitoylating activity and also low lysophospholipase activity. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: - |
| >sp|P0CL94|APTH1_CRYNJ Acyl-protein thioesterase 1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CNF02430 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 124/245 (50%), Gaps = 38/245 (15%)
Query: 27 VRPKGKHQATIVWLHGLGDNGSSWSQLLESL--PLPNIKWICPTAPTRPVAILGGFPCTA 84
+ PK H AT+++LHGLGD+G W + + L PN+KWI P APT PV++ G +
Sbjct: 10 ISPKEAHTATVIFLHGLGDSGHGWLPVAKMLWSSFPNVKWILPHAPTIPVSLNHGMAMPS 69
Query: 85 WFDV---GELSDDGPEDWEGLDASAAHIANLLSTEP----ADVKVGIGGFSMGAAVALYS 137
WFD+ +L + +D +G+ + + L+ E + ++ +GGFS G A+++
Sbjct: 70 WFDIRHLDKLDNSENDDEQGMLETLKSVDELIQAEVDSGIPENRIVLGGFSQGGAISVL- 128
Query: 138 ATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGL 197
N + L VV LS W+P L +KI + A +P+ HG
Sbjct: 129 ----------NMLTTKRKLAGVVALSTWVP----LNHKI--VQMMSEHAKDIPVFWGHGT 172
Query: 198 CDDVVPYKYGEKSANCL-SISGFRHLT-----------FKSFEGLGHYTVPKEMDEVCNW 245
D VV Y++G++S + L G++ L+ F+S+ G+ H + P+E++++ +W
Sbjct: 173 NDPVVDYRFGQRSVDFLVQKCGYKLLSQGTTFARPGIRFESYPGMPHSSCPQEIEDLKSW 232
Query: 246 LTARL 250
L L
Sbjct: 233 LMEAL 237
|
Hydrolyzes fatty acids from S-acylated cysteine residues in proteins with a strong preference for palmitoylated G-alpha proteins over other acyl substrates. Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (taxid: 214684) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 257 | ||||||
| 317106756 | 258 | JHL25H03.13 [Jatropha curcas] | 1.0 | 0.996 | 0.841 | 1e-125 | |
| 255553067 | 258 | Acyl-protein thioesterase, putative [Ric | 1.0 | 0.996 | 0.844 | 1e-123 | |
| 224058703 | 258 | predicted protein [Populus trichocarpa] | 1.0 | 0.996 | 0.837 | 1e-123 | |
| 356526193 | 256 | PREDICTED: acyl-protein thioesterase 2-l | 0.992 | 0.996 | 0.835 | 1e-122 | |
| 224073764 | 258 | predicted protein [Populus trichocarpa] | 1.0 | 0.996 | 0.821 | 1e-121 | |
| 297743392 | 292 | unnamed protein product [Vitis vinifera] | 0.988 | 0.869 | 0.854 | 1e-119 | |
| 356519385 | 256 | PREDICTED: acyl-protein thioesterase 2-l | 0.992 | 0.996 | 0.819 | 1e-119 | |
| 225442835 | 257 | PREDICTED: acyl-protein thioesterase 2 [ | 0.988 | 0.988 | 0.854 | 1e-119 | |
| 255647464 | 256 | unknown [Glycine max] | 0.992 | 0.996 | 0.815 | 1e-118 | |
| 225430218 | 257 | PREDICTED: acyl-protein thioesterase 2 i | 1.0 | 1.0 | 0.778 | 1e-117 |
| >gi|317106756|dbj|BAJ53250.1| JHL25H03.13 [Jatropha curcas] | Back alignment and taxonomy information |
|---|
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/258 (84%), Positives = 238/258 (92%), Gaps = 1/258 (0%)
Query: 1 MSYS-HQTVGSGSRAARRTFEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPL 59
MSY H ++GSGSR RRTFEFGRT+VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPL
Sbjct: 1 MSYQQHPSMGSGSRTVRRTFEFGRTYVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPL 60
Query: 60 PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPAD 119
PNIKWICPTAPTRPVA+LGGFPCTAWFDVGE+S++ P+DWEGLDASAAHIANLLSTEP D
Sbjct: 61 PNIKWICPTAPTRPVALLGGFPCTAWFDVGEISENSPDDWEGLDASAAHIANLLSTEPTD 120
Query: 120 VKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGS 179
VKVGIGGFSMGAA A+YSATC A+GRYGNG Y +NLRAVV LSGWLPGSRNLRNKIEGS
Sbjct: 121 VKVGIGGFSMGAATAIYSATCAAMGRYGNGNLYPINLRAVVALSGWLPGSRNLRNKIEGS 180
Query: 180 HEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEM 239
H+AARRAASLPILL HG CDDVVPY YGE+SA+ L+ +GFRHLTFK ++GLGHYTVP+EM
Sbjct: 181 HDAARRAASLPILLCHGTCDDVVPYNYGERSAHFLNTAGFRHLTFKPYDGLGHYTVPREM 240
Query: 240 DEVCNWLTARLGLEGSRA 257
DEV NWLTA+LGLEGSR+
Sbjct: 241 DEVRNWLTAKLGLEGSRS 258
|
Source: Jatropha curcas Species: Jatropha curcas Genus: Jatropha Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255553067|ref|XP_002517576.1| Acyl-protein thioesterase, putative [Ricinus communis] gi|223543208|gb|EEF44740.1| Acyl-protein thioesterase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/258 (84%), Positives = 236/258 (91%), Gaps = 1/258 (0%)
Query: 1 MSYS-HQTVGSGSRAARRTFEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPL 59
MSY H +VGSGSR ARRTFEFGRT+VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPL
Sbjct: 1 MSYQQHPSVGSGSRTARRTFEFGRTYVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPL 60
Query: 60 PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPAD 119
PNIKWICPTAPTRPVA+LGGFPCTAWFDVGE+S++ P+DWEGLDASAAHIANLLSTEP D
Sbjct: 61 PNIKWICPTAPTRPVALLGGFPCTAWFDVGEISENSPDDWEGLDASAAHIANLLSTEPTD 120
Query: 120 VKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGS 179
VKVGIGGFSMGAA+ALYSATC ALGRYGNG Y +NLRAVVGLSGWLPGSR+LR+KIEG
Sbjct: 121 VKVGIGGFSMGAAIALYSATCAALGRYGNGNLYPINLRAVVGLSGWLPGSRSLRSKIEGL 180
Query: 180 HEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEM 239
+EA RRAASLPILL HG DDVV Y YGEKSA+ L+ +GFRHLTFK +EGLGHYTVPKEM
Sbjct: 181 NEAVRRAASLPILLCHGTSDDVVSYNYGEKSAHSLNTAGFRHLTFKPYEGLGHYTVPKEM 240
Query: 240 DEVCNWLTARLGLEGSRA 257
DEV NWL+A+L LEGSRA
Sbjct: 241 DEVRNWLSAKLNLEGSRA 258
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224058703|ref|XP_002299611.1| predicted protein [Populus trichocarpa] gi|222846869|gb|EEE84416.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/258 (83%), Positives = 236/258 (91%), Gaps = 1/258 (0%)
Query: 1 MSYS-HQTVGSGSRAARRTFEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPL 59
MSY H ++GSGSR ARR FEFGRT+VVRPKGKHQATIVWLHGLGDNGSSWSQLLE+LPL
Sbjct: 1 MSYQQHFSMGSGSRPARRNFEFGRTYVVRPKGKHQATIVWLHGLGDNGSSWSQLLENLPL 60
Query: 60 PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPAD 119
PNIKWICPTAPTRPVA+LGGFPCTAW DVGE+S+D P+DWEGLDASAAHIANLLSTEPAD
Sbjct: 61 PNIKWICPTAPTRPVALLGGFPCTAWSDVGEISEDSPDDWEGLDASAAHIANLLSTEPAD 120
Query: 120 VKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGS 179
VKV IGGFSMGAA A+YSATC ALG+YGNG Y +NLRAVVGLSGWLPGSR+LR+K+EGS
Sbjct: 121 VKVAIGGFSMGAATAIYSATCAALGQYGNGNAYPINLRAVVGLSGWLPGSRSLRSKVEGS 180
Query: 180 HEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEM 239
HEAARRAASLPI L HG DDVVPY YGEKSA+ L+ +GFR+L FKS+EGLGHYTVPKEM
Sbjct: 181 HEAARRAASLPIFLCHGTSDDVVPYNYGEKSAHSLNTAGFRNLIFKSYEGLGHYTVPKEM 240
Query: 240 DEVCNWLTARLGLEGSRA 257
DEV NWLTARLGLEGSR+
Sbjct: 241 DEVRNWLTARLGLEGSRS 258
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356526193|ref|XP_003531704.1| PREDICTED: acyl-protein thioesterase 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 213/255 (83%), Positives = 233/255 (91%)
Query: 1 MSYSHQTVGSGSRAARRTFEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLP 60
MSY H +GSGSR ARR+ EFG+THVVRPKGKHQATIVWLHGLGDNG S QLLESLPLP
Sbjct: 1 MSYPHYHMGSGSRTARRSLEFGKTHVVRPKGKHQATIVWLHGLGDNGLSSYQLLESLPLP 60
Query: 61 NIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPADV 120
NIKWICPTAPTRPV ILGGF CTAWFD+GELS+DGP+DWEGLDASA+HIANLLSTEPADV
Sbjct: 61 NIKWICPTAPTRPVTILGGFSCTAWFDMGELSEDGPDDWEGLDASASHIANLLSTEPADV 120
Query: 121 KVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSH 180
KVGIGGFSMGAAVA YSATC A+GRYGNGIPY VNLRAVVGLSGWLPGSR+LRNKIE SH
Sbjct: 121 KVGIGGFSMGAAVAQYSATCFAMGRYGNGIPYPVNLRAVVGLSGWLPGSRSLRNKIEVSH 180
Query: 181 EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMD 240
EA RRAASLP+LL+HG+ DDVV YKYGEKSA LS +GFR++TFKS++GLGHYTVP+EMD
Sbjct: 181 EARRRAASLPVLLSHGISDDVVLYKYGEKSAQSLSSAGFRYITFKSYDGLGHYTVPREMD 240
Query: 241 EVCNWLTARLGLEGS 255
EV NWL++RLGL GS
Sbjct: 241 EVSNWLSSRLGLGGS 255
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224073764|ref|XP_002304161.1| predicted protein [Populus trichocarpa] gi|222841593|gb|EEE79140.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/258 (82%), Positives = 234/258 (90%), Gaps = 1/258 (0%)
Query: 1 MSYS-HQTVGSGSRAARRTFEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPL 59
MSY H ++GSGSR ARR FEFGRT VVRP+GKHQATIVWLHGLGDNGSS SQLLE+LPL
Sbjct: 1 MSYQQHFSMGSGSRPARRNFEFGRTCVVRPQGKHQATIVWLHGLGDNGSSCSQLLENLPL 60
Query: 60 PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPAD 119
PN+KWICPTAPTRPVA+LGGFPCTAWFDVGE+S++ P+DWEGLDASAAHIANLLSTEPAD
Sbjct: 61 PNVKWICPTAPTRPVALLGGFPCTAWFDVGEISEESPDDWEGLDASAAHIANLLSTEPAD 120
Query: 120 VKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGS 179
VK+ IGGFSMGAA ALYSATC A GRYGNG Y +NLRAVVGLSGWLPGSR+LR K+EGS
Sbjct: 121 VKIAIGGFSMGAATALYSATCAAFGRYGNGNAYPINLRAVVGLSGWLPGSRSLRTKVEGS 180
Query: 180 HEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEM 239
HEAARRAASLPI + HG DDVVPY YGEKSA CL+ +GFR+LTFKS+EGLGHYTVP+EM
Sbjct: 181 HEAARRAASLPIFICHGTSDDVVPYNYGEKSAQCLNTAGFRNLTFKSYEGLGHYTVPREM 240
Query: 240 DEVCNWLTARLGLEGSRA 257
DEV NWLTARLGL+GSR+
Sbjct: 241 DEVRNWLTARLGLDGSRS 258
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297743392|emb|CBI36259.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/254 (85%), Positives = 238/254 (93%)
Query: 1 MSYSHQTVGSGSRAARRTFEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLP 60
MSYS+ ++GSGSR ARRTFEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLE+LPLP
Sbjct: 36 MSYSNHSMGSGSRTARRTFEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLENLPLP 95
Query: 61 NIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPADV 120
NIKWICPTAPTRPVA+LGGFPCTAWFDVGELSDDGP+D +GLDASAAHIANLLSTEPADV
Sbjct: 96 NIKWICPTAPTRPVAVLGGFPCTAWFDVGELSDDGPDDLDGLDASAAHIANLLSTEPADV 155
Query: 121 KVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSH 180
K+G+GGFSMGAA ALYSATC A +YGN PY VNL+AVVGLSGWLPGSR+LRNKIEGSH
Sbjct: 156 KLGVGGFSMGAATALYSATCYAQAKYGNNSPYPVNLKAVVGLSGWLPGSRSLRNKIEGSH 215
Query: 181 EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMD 240
EAARRAASLPI+L HG+ DDVV Y YGE+SA+CLS +GFR+LTFK+++GLGHYTVPKEMD
Sbjct: 216 EAARRAASLPIMLCHGMNDDVVAYNYGERSAHCLSSAGFRYLTFKAYDGLGHYTVPKEMD 275
Query: 241 EVCNWLTARLGLEG 254
EVC WLTARLGLEG
Sbjct: 276 EVCTWLTARLGLEG 289
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356519385|ref|XP_003528353.1| PREDICTED: acyl-protein thioesterase 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/255 (81%), Positives = 229/255 (89%)
Query: 1 MSYSHQTVGSGSRAARRTFEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLP 60
MSY H +GSGSR A R+ EFG+THVVRPKGKHQATIVWLHGLGDNG S QLLESLPLP
Sbjct: 1 MSYPHYHMGSGSRTASRSLEFGKTHVVRPKGKHQATIVWLHGLGDNGLSSYQLLESLPLP 60
Query: 61 NIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPADV 120
NIKWICPTAP+RPV ILGGF CTAWFD+GELS+DGP DWE LDASA+HIANLLSTEPADV
Sbjct: 61 NIKWICPTAPSRPVTILGGFSCTAWFDMGELSEDGPVDWESLDASASHIANLLSTEPADV 120
Query: 121 KVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSH 180
KVGIGGFSMGAAVA YSATC A+GRYGNGIPY VNLRAVVGLSGWLPGSR+LRNKIE SH
Sbjct: 121 KVGIGGFSMGAAVAQYSATCFAMGRYGNGIPYPVNLRAVVGLSGWLPGSRSLRNKIEVSH 180
Query: 181 EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMD 240
EA RRAA LP+LL+HG+ DDVV YKYGEKSA LS +GFR++TFKS++GLGHYTVP+EMD
Sbjct: 181 EARRRAALLPVLLSHGISDDVVLYKYGEKSAQSLSSAGFRYITFKSYDGLGHYTVPREMD 240
Query: 241 EVCNWLTARLGLEGS 255
EV NWL++RLGL GS
Sbjct: 241 EVSNWLSSRLGLGGS 255
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225442835|ref|XP_002285335.1| PREDICTED: acyl-protein thioesterase 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/254 (85%), Positives = 238/254 (93%)
Query: 1 MSYSHQTVGSGSRAARRTFEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLP 60
MSYS+ ++GSGSR ARRTFEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLE+LPLP
Sbjct: 1 MSYSNHSMGSGSRTARRTFEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLENLPLP 60
Query: 61 NIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPADV 120
NIKWICPTAPTRPVA+LGGFPCTAWFDVGELSDDGP+D +GLDASAAHIANLLSTEPADV
Sbjct: 61 NIKWICPTAPTRPVAVLGGFPCTAWFDVGELSDDGPDDLDGLDASAAHIANLLSTEPADV 120
Query: 121 KVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSH 180
K+G+GGFSMGAA ALYSATC A +YGN PY VNL+AVVGLSGWLPGSR+LRNKIEGSH
Sbjct: 121 KLGVGGFSMGAATALYSATCYAQAKYGNNSPYPVNLKAVVGLSGWLPGSRSLRNKIEGSH 180
Query: 181 EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMD 240
EAARRAASLPI+L HG+ DDVV Y YGE+SA+CLS +GFR+LTFK+++GLGHYTVPKEMD
Sbjct: 181 EAARRAASLPIMLCHGMNDDVVAYNYGERSAHCLSSAGFRYLTFKAYDGLGHYTVPKEMD 240
Query: 241 EVCNWLTARLGLEG 254
EVC WLTARLGLEG
Sbjct: 241 EVCTWLTARLGLEG 254
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255647464|gb|ACU24196.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/255 (81%), Positives = 228/255 (89%)
Query: 1 MSYSHQTVGSGSRAARRTFEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLP 60
MSY H +GSGSR A R+ EFG+THVVRPKGKHQATIVWLHGLGDNG S QLLESLPLP
Sbjct: 1 MSYPHYHMGSGSRTASRSLEFGKTHVVRPKGKHQATIVWLHGLGDNGLSSYQLLESLPLP 60
Query: 61 NIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPADV 120
NIKWICPTAP+RPV ILGGF CTAWFD+GELS+DGP DWE LDASA+HIANLLSTEPADV
Sbjct: 61 NIKWICPTAPSRPVTILGGFSCTAWFDMGELSEDGPVDWESLDASASHIANLLSTEPADV 120
Query: 121 KVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSH 180
KVGIGGFSMGAAVA YSATC A+GRYGNGIPY VNLRAVVGLSG LPGSR+LRNKIE SH
Sbjct: 121 KVGIGGFSMGAAVAQYSATCFAMGRYGNGIPYPVNLRAVVGLSGRLPGSRSLRNKIEVSH 180
Query: 181 EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMD 240
EA RRAA LP+LL+HG+ DDVV YKYGEKSA LS +GFR++TFKS++GLGHYTVP+EMD
Sbjct: 181 EARRRAALLPVLLSHGISDDVVLYKYGEKSAQSLSSAGFRYITFKSYDGLGHYTVPREMD 240
Query: 241 EVCNWLTARLGLEGS 255
EV NWL++RLGL GS
Sbjct: 241 EVSNWLSSRLGLGGS 255
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225430218|ref|XP_002285009.1| PREDICTED: acyl-protein thioesterase 2 isoform 1 [Vitis vinifera] gi|296082006|emb|CBI21011.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/257 (77%), Positives = 231/257 (89%)
Query: 1 MSYSHQTVGSGSRAARRTFEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLP 60
MS++ T+GSGSR RRTFEFGRTHVVRPKGKHQATIVWLHGLGD GSSWSQ+LE+LPLP
Sbjct: 1 MSFNSSTMGSGSRTTRRTFEFGRTHVVRPKGKHQATIVWLHGLGDKGSSWSQILETLPLP 60
Query: 61 NIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPADV 120
NIKWICPTAPTRPVA+LGGFPCTAWFDVGE+S+D P+D EGLDASAAH+ANLLSTEPA++
Sbjct: 61 NIKWICPTAPTRPVALLGGFPCTAWFDVGEISEDAPDDLEGLDASAAHVANLLSTEPANI 120
Query: 121 KVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSH 180
K+G+GGFSMGAAVA+YSATC LG+YGNG PY V L A+VGLSGWLP SR L N++E SH
Sbjct: 121 KLGVGGFSMGAAVAVYSATCRVLGQYGNGNPYQVTLSAIVGLSGWLPCSRTLMNQMERSH 180
Query: 181 EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMD 240
EAARRAA+LPILL HG+ DDVV YK+GEKSA LS +GFR+LTF+++ GLGHYT+P+E D
Sbjct: 181 EAARRAATLPILLCHGIGDDVVAYKHGEKSAQTLSAAGFRNLTFRTYNGLGHYTIPEETD 240
Query: 241 EVCNWLTARLGLEGSRA 257
EVCNWLTARL L+GSR+
Sbjct: 241 EVCNWLTARLMLDGSRS 257
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 257 | ||||||
| TAIR|locus:2035064 | 255 | AT1G52700 "AT1G52700" [Arabido | 0.992 | 1.0 | 0.773 | 4e-106 | |
| TAIR|locus:2147650 | 252 | AT5G20060 "AT5G20060" [Arabido | 0.980 | 1.0 | 0.665 | 1.6e-95 | |
| TAIR|locus:1005716739 | 231 | AT1G52695 [Arabidopsis thalian | 0.852 | 0.948 | 0.423 | 1.2e-40 | |
| FB|FBgn0042138 | 216 | CG18815 [Drosophila melanogast | 0.766 | 0.912 | 0.387 | 1.1e-32 | |
| TAIR|locus:2035174 | 230 | AT1G52460 [Arabidopsis thalian | 0.789 | 0.882 | 0.410 | 2.3e-30 | |
| TAIR|locus:2008271 | 212 | AT1G51300 [Arabidopsis thalian | 0.295 | 0.358 | 0.464 | 8.6e-30 | |
| TAIR|locus:2035154 | 235 | AT1G52470 "AT1G52470" [Arabido | 0.797 | 0.872 | 0.372 | 7.1e-29 | |
| MGI|MGI:1347000 | 231 | Lypla2 "lysophospholipase 2" [ | 0.766 | 0.852 | 0.361 | 1.9e-28 | |
| RGD|620210 | 231 | Lypla2 "lysophospholipase II" | 0.766 | 0.852 | 0.361 | 1.9e-28 | |
| UNIPROTKB|J9PAN4 | 231 | LYPLA2 "Uncharacterized protei | 0.766 | 0.852 | 0.361 | 6.4e-28 |
| TAIR|locus:2035064 AT1G52700 "AT1G52700" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1050 (374.7 bits), Expect = 4.0e-106, P = 4.0e-106
Identities = 198/256 (77%), Positives = 226/256 (88%)
Query: 1 MSYSHQTVGSGSRAARRTFEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLP 60
MSYSHQ++GSGSR AR +EFGRT+VVRPKGKHQAT+VWLHGLGDNGSS SQL++SL LP
Sbjct: 1 MSYSHQSMGSGSRNARG-YEFGRTYVVRPKGKHQATLVWLHGLGDNGSSSSQLMDSLHLP 59
Query: 61 NIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPADV 120
NIKWICPTAP+RPV LGGF CTAWFDVGE+S+DG +D EGLDASA+HIANLLS+EPADV
Sbjct: 60 NIKWICPTAPSRPVTSLGGFTCTAWFDVGEISEDGHDDLEGLDASASHIANLLSSEPADV 119
Query: 121 KVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSH 180
KVGIGGFSMGAA++LYSATC ALGRYG G Y +NL+AVVGLSGWLPG ++LR+KIE S
Sbjct: 120 KVGIGGFSMGAAISLYSATCYALGRYGTGHAYPINLQAVVGLSGWLPGWKSLRSKIECSF 179
Query: 181 EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMD 240
EAARRAASLPI+LTHG DDVVPY++GEKSA L ++GFR FK +EGLGHYTVP+EMD
Sbjct: 180 EAARRAASLPIILTHGTSDDVVPYRFGEKSAQSLGMAGFRLAMFKPYEGLGHYTVPREMD 239
Query: 241 EVCNWLTARLGLEGSR 256
EV +WLT LGLEGSR
Sbjct: 240 EVVHWLTTMLGLEGSR 255
|
|
| TAIR|locus:2147650 AT5G20060 "AT5G20060" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
Identities = 169/254 (66%), Positives = 210/254 (82%)
Query: 1 MSYSHQTVGSGSRAARRTFEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLP 60
MS S VGSG R RR EFG+THVVRPKGKHQATIVWLHGLGDNGSSWSQLLE+LPLP
Sbjct: 1 MSISGAAVGSG-RNLRRAVEFGKTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLETLPLP 59
Query: 61 NIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPADV 120
NIKWICPTAP++P+++ GGFP TAWFDV ++++DGP+D EGLD +AAH+ANLLS EPAD+
Sbjct: 60 NIKWICPTAPSQPISLFGGFPSTAWFDVVDINEDGPDDMEGLDVAAAHVANLLSNEPADI 119
Query: 121 KVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSH 180
K+G+GGFSMGAA +LYSATC ALG+YGNG PY +NL A++GLSGWLP ++ L K+E
Sbjct: 120 KLGVGGFSMGAATSLYSATCFALGKYGNGNPYPINLSAIIGLSGWLPCAKTLAGKLE-EE 178
Query: 181 EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMD 240
+ RAASLPI++ HG DDVVP+K+GEKS+ L +GF+ +TFK + LGH+T+P+E+D
Sbjct: 179 QIKNRAASLPIVVCHGKADDVVPFKFGEKSSQALLSNGFKKVTFKPYSALGHHTIPQELD 238
Query: 241 EVCNWLTARLGLEG 254
E+C WLT+ L LEG
Sbjct: 239 ELCAWLTSTLSLEG 252
|
|
| TAIR|locus:1005716739 AT1G52695 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 99/234 (42%), Positives = 141/234 (60%)
Query: 20 EFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGG 79
EFG+ + V P G H+ATIVWLH +G+ G + + L++L LPNIKWICPTAP R V LGG
Sbjct: 12 EFGQINTVYPTGIHKATIVWLHDVGNTGFNSLEPLQNLRLPNIKWICPTAPRRRVTSLGG 71
Query: 80 FPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSAT 139
AW D+ ++S++ +D+ L+ +I +L S EP +V G+ G +GAA ALY +
Sbjct: 72 EITNAWCDIAKVSENMQDDFGTLNYVNEYITSLFSNEPQNVIKGVAGLGLGAAQALYYTS 131
Query: 140 CCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSH-EAARRAASLPILLTHGLC 198
C A G +P +N + V+G++GWLPG R L + ++ A RAA+ IL+ HG
Sbjct: 132 CYAFG----WVP--INPQIVIGINGWLPGWRRLEYNMNNTNFGTANRAAASKILILHGTS 185
Query: 199 DDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLGL 252
DDVVP +G + A+ L ++GF L FK G H ++E+ WLT LGL
Sbjct: 186 DDVVPSSFGYRCADSLRMAGFPTL-FKQCGG-DHV-----INEIRVWLT-NLGL 231
|
|
| FB|FBgn0042138 CG18815 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 86/222 (38%), Positives = 124/222 (55%)
Query: 26 VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAW 85
+V K AT++++HGLGD G WS L ++ P +K ICPTAPT+PV++ GF +W
Sbjct: 6 IVEATVKQTATLIFMHGLGDTGHGWSSALAAIRPPFMKVICPTAPTQPVSLNAGFRMPSW 65
Query: 86 FDVGELSDDGPEDWEGLDASAAHIANLLSTE-----PADVKVGIGGFSMGAAVALYSATC 140
FD+ L GPED G+ ++ + ++ E PA+ ++ +GGFS G A+ALYSA
Sbjct: 66 FDLKTLDIGGPEDEPGIQSARDSVHGMIQKEISAGIPAN-RIVLGGFSQGGALALYSA-- 122
Query: 141 CALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDD 200
+ Y L VV LS WLP L + G A + +PI HG D
Sbjct: 123 ---------LTYDQPLAGVVALSCWLP----LHKQFPG---AKVNSDDVPIFQAHGDYDP 166
Query: 201 VVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEV 242
VVPYK+G+ SA+ L S +++TFK++ GL H + EMD+V
Sbjct: 167 VVPYKFGQLSASLLK-SFMKNVTFKTYSGLSHSSSDDEMDDV 207
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| TAIR|locus:2035174 AT1G52460 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 96/234 (41%), Positives = 132/234 (56%)
Query: 26 VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAW 85
VV+PKG+H+ TIVWLH ++ S Q ++ L L NIKWICP+ +L P +
Sbjct: 13 VVQPKGEHRVTIVWLHDKDEHFSDSVQFVKILNLNNIKWICPSL------VL---PTSR- 62
Query: 86 FDVGELSDDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGR 145
+ E + + L +A +ANL S EP +V G+GGF MGAAVAL+ AT CAL
Sbjct: 63 -NKPEYNIN-----HALYLTAERVANLFSDEPENVIKGVGGFGMGAAVALHFATSCALNH 116
Query: 146 YGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIE-GSHEAARRAASLPILLTHGLCDDVVPY 204
Y +N R VVG+SGWL +++L+ IE S+EA RAAS ILLTHG D V P+
Sbjct: 117 YT------INPRVVVGISGWLSKAKSLKRSIEFASYEAPPRAASQSILLTHGQRDHV-PH 169
Query: 205 KYG--EKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDE---VCNWLTARLGLE 253
G E++A L +GFR + F F G + E++ V +WL +L L+
Sbjct: 170 LCGCGEEAAFILREAGFRDVRFLPFARFG--PIAHEINRNVMVKSWLEEKLPLD 221
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| TAIR|locus:2008271 AT1G51300 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 173 (66.0 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
Identities = 39/84 (46%), Positives = 53/84 (63%)
Query: 86 FDVGELSDDGPEDWE--GLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCAL 143
F V E S P+ +E GL SAAH+A LL EP +V G+ G+ +G A+AL+ ATC AL
Sbjct: 108 FKVNEFSSRMPDPYEMEGLKNSAAHVAGLLKNEPENVMKGVAGYGIGGALALHIATCYAL 167
Query: 144 GRYGNGIPYYVNLRAVVGLSGWLP 167
G + P + +RAVVG++ WLP
Sbjct: 168 GSF----P--IQIRAVVGINCWLP 185
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| TAIR|locus:2035154 AT1G52470 "AT1G52470" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 83/223 (37%), Positives = 121/223 (54%)
Query: 10 SGSRAARRTFEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTA 69
S SR + +H V P+G +A+IVWLH ++ + Q ++SL L N+ WICP
Sbjct: 4 SSSRNGANVLDLKCSHFVEPQGDQRASIVWLHDKDEHFTDSVQFVKSLKLKNVNWICP-- 61
Query: 70 PTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSM 129
P+ + T+ +D G S+ +D E LD++A +A+LL EP +V G+GGF M
Sbjct: 62 ---PIV----YTNTS-YDFG--SNIKQDDREALDSAAKFVADLLLREPLNVVKGVGGFGM 111
Query: 130 GAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASL 189
GA VAL AT CALG Y P +N R VVG++GWL + ++ + IE + A RAAS
Sbjct: 112 GAVVALQFATNCALGHY----P--INPRVVVGINGWLSITGSITSSIEYTVGAVARAASQ 165
Query: 190 PILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGH 232
I T G + ++PY E+ L +GF + F + L H
Sbjct: 166 KIFFTRGAENRLLPYTREEEVVESLREAGFGDVFFLIYSWLRH 208
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| MGI|MGI:1347000 Lypla2 "lysophospholipase 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 80/221 (36%), Positives = 119/221 (53%)
Query: 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGEL 91
+ A +++LHGLGD G SW+ L ++ LP++K+ICP AP PV + +WFD+ L
Sbjct: 22 RETAAVIFLHGLGDTGHSWADALSTIRLPHVKYICPHAPRIPVTLNMKMVMPSWFDLMGL 81
Query: 92 SDDGPEDWEGLDASAAHIANLLSTE-----PADVKVGIGGFSMGAAVALYSATCCALGRY 146
S D PED G+ +A +I L+ E PA+ ++ +GGFS G A++LY+A C
Sbjct: 82 SPDAPEDEAGIKKAAENIKALIEHEMKNGIPAN-RIVLGGFSQGGALSLYTALTC----- 135
Query: 147 GNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKY 206
P+ L +V LS WLP RN GS A L IL HG D +VP ++
Sbjct: 136 ----PH--PLAGIVALSCWLPLHRNFPQAANGS------AKDLAILQCHGELDPMVPVRF 183
Query: 207 GEKSANCL-SISGFRHLTFKSFEGLGHYTVPKEMDEVCNWL 246
G +A L ++ + FK++ G+ H + P+EM V +L
Sbjct: 184 GALTAEKLRTVVTPARVQFKTYPGVMHSSCPQEMAAVKEFL 224
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| RGD|620210 Lypla2 "lysophospholipase II" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 80/221 (36%), Positives = 119/221 (53%)
Query: 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGEL 91
+ A +++LHGLGD G SW+ L ++ LP++K+ICP AP PV + +WFD+ L
Sbjct: 22 RETAAVIFLHGLGDTGHSWADALSTIRLPHVKYICPHAPRIPVTLNMKMVMPSWFDLMGL 81
Query: 92 SDDGPEDWEGLDASAAHIANLLSTE-----PADVKVGIGGFSMGAAVALYSATCCALGRY 146
S D PED G+ +A +I L+ E PA+ ++ +GGFS G A++LY+A C
Sbjct: 82 SPDAPEDEAGIKKAAENIKALIEHEMKNGIPAN-RIVLGGFSQGGALSLYTALTC----- 135
Query: 147 GNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKY 206
P+ L +V LS WLP RN GS A L IL HG D +VP ++
Sbjct: 136 ----PH--PLAGIVALSCWLPLHRNFPQAANGS------AKDLAILQCHGELDPMVPVRF 183
Query: 207 GEKSANCL-SISGFRHLTFKSFEGLGHYTVPKEMDEVCNWL 246
G +A L ++ + FK++ G+ H + P+EM V +L
Sbjct: 184 GALTAEKLRTVVTPARVQFKTYPGVMHSSCPQEMAAVKEFL 224
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| UNIPROTKB|J9PAN4 LYPLA2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 80/221 (36%), Positives = 118/221 (53%)
Query: 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGEL 91
+ A +++LHGLGD G SW+ L ++ LP++K+ICP AP PV + +WFD+ L
Sbjct: 22 RETAAVIFLHGLGDTGHSWADALSTIRLPHVKYICPHAPRIPVTLNMKMVMPSWFDLMGL 81
Query: 92 SDDGPEDWEGLDASAAHIANLLSTE-----PADVKVGIGGFSMGAAVALYSATCCALGRY 146
S D PED G+ +A +I L+ E PA+ ++ +GGFS G A++LY+A C
Sbjct: 82 SPDAPEDEAGIKKAAENIKALIEHEMKNGIPAN-RIVLGGFSQGGALSLYTALTC----- 135
Query: 147 GNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKY 206
P+ L +V LS WLP R GS A L IL HG D +VP ++
Sbjct: 136 ----PH--PLAGIVALSCWLPLHRAFPQAANGS------AKDLAILQCHGELDPMVPVRF 183
Query: 207 GEKSANCL-SISGFRHLTFKSFEGLGHYTVPKEMDEVCNWL 246
G +A L S+ + FK++ G+ H + P+EM V +L
Sbjct: 184 GALTAEKLRSVVTPARVQFKTYPGVMHSSCPQEMAAVKEFL 224
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q6FW75 | APTH1_CANGA | 3, ., 1, ., 2, ., - | 0.3008 | 0.8093 | 0.9043 | yes | no |
| Q54T49 | APT11_DICDI | 3, ., 1, ., 2, ., - | 0.3037 | 0.8093 | 0.9203 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.2 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | grail3.0084003101 | hypothetical protein (258 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | gw1.40.286.1 | phospholipase A1 (EC-3.1.1.32) (357 aa) | • | 0.899 | |||||||
 | fgenesh4_pg.C_LG_II001255 | phospholipase A1 (EC-3.1.1.32) (367 aa) | • | 0.899 | |||||||
 | eugene3.00820009 | SubName- Full=Putative uncharacterized protein; (399 aa) | • | 0.899 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 257 | |||
| pfam02230 | 213 | pfam02230, Abhydrolase_2, Phospholipase/Carboxyles | 5e-51 | |
| COG0400 | 207 | COG0400, COG0400, Predicted esterase [General func | 3e-21 | |
| pfam03959 | 209 | pfam03959, FSH1, Serine hydrolase (FSH1) | 2e-09 | |
| pfam12697 | 187 | pfam12697, Abhydrolase_6, Alpha/beta hydrolase fam | 1e-08 | |
| pfam12695 | 145 | pfam12695, Abhydrolase_5, Alpha/beta hydrolase fam | 2e-06 | |
| PRK10566 | 249 | PRK10566, PRK10566, esterase; Provisional | 0.003 |
| >gnl|CDD|216940 pfam02230, Abhydrolase_2, Phospholipase/Carboxylesterase | Back alignment and domain information |
|---|
Score = 165 bits (420), Expect = 5e-51
Identities = 83/231 (35%), Positives = 111/231 (48%), Gaps = 26/231 (11%)
Query: 26 VVRPKGKHQATIVWLHGLGDNGSSWS-QLLESLPLPNIKWICPTAPTRPVAILGGFPCTA 84
+ P QAT+++LHGLGD G W+ PLP+ K+I P P RPV + GG A
Sbjct: 3 IESPAKPAQATVIFLHGLGDTGHGWAFAAKCEAPLPHTKFIFPHGPERPVTLNGGMRMPA 62
Query: 85 WFDVGELSDDGPEDWEGLDASAAHIANLLSTE-----PADVKVGIGGFSMGAAVALYSAT 139
WFD+ LS + ED G+ SA I L+ E PA ++ IGGFS GAAVALY+A
Sbjct: 63 WFDIVGLSPNASEDEAGIKNSAETIEELIDAELKTGIPAS-RIIIGGFSQGAAVALYTAL 121
Query: 140 CCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCD 199
L ++ SG LP L K + A +PIL HG D
Sbjct: 122 TSPQ-----------PLGGIIAFSGALP----LPQKFP---QHPTGVADIPILQLHGYED 163
Query: 200 DVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250
VVP G+ + L TFKS+ G+GH P+EM ++ +L +
Sbjct: 164 PVVPLALGKLAKEYLKTLLNPV-TFKSYPGMGHSICPQEMQDIKKFLAKHI 213
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This family consists of both phospholipases and carboxylesterases with broad substrate specificity, and is structurally related to alpha/beta hydrolases pfam00561. Length = 213 |
| >gnl|CDD|223477 COG0400, COG0400, Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Score = 88.1 bits (219), Expect = 3e-21
Identities = 65/233 (27%), Positives = 86/233 (36%), Gaps = 39/233 (16%)
Query: 25 HVVRPKGKHQA-TIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCT 83
+ G A ++ LHGLG + L E L LPN + P P VA GG
Sbjct: 8 PRIEKPGDPAAPLLILLHGLGGDELDLVPLPE-LILPNATLVSPRGP---VAENGGPRFF 63
Query: 84 AWFDVGELSDDGPEDWEGLDASAAHIA-----NLLSTEPADVKVGIGGFSMGAAVALYSA 138
+D +G D E LD +A ++ + GFS GA +AL
Sbjct: 64 RRYD------EGSFDQEDLDLETEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSL- 116
Query: 139 TCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLC 198
G+ + SG LP E A PILL+HG
Sbjct: 117 ----------GLTLPGLFAGAILFSGMLPLE----------PELLPDLAGTPILLSHGTE 156
Query: 199 DDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251
D VVP E A L+ SG + EG GH P+E++ +WL LG
Sbjct: 157 DPVVPLALAEALAEYLTASGADV-EVRWHEG-GHEIPPEELEAARSWLANTLG 207
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Length = 207 |
| >gnl|CDD|217816 pfam03959, FSH1, Serine hydrolase (FSH1) | Back alignment and domain information |
|---|
Score = 55.4 bits (134), Expect = 2e-09
Identities = 51/214 (23%), Positives = 75/214 (35%), Gaps = 40/214 (18%)
Query: 40 LHGLGDNGSSWSQLLESLP---LPNIKWICPTAP---TRPVAILGGFPCT---------- 83
LHG G +G + +L ++ + AP +
Sbjct: 10 LHGFGQSGEIFRAKTGALRKLLKKGVELVYLDAPFPLAEKADLPFEESDAEEGEDDEPYR 69
Query: 84 AWFDVGELSDDGPEDWEGLDASAAHIAN-LLSTEPADVKVGIGGFSMGAAVALYSATCCA 142
AWF DD ++ GLD S ++ + + P D GI GFS GAA+A A +
Sbjct: 70 AWF----FGDDDTNEYRGLDESLDYVRDYIKENGPFD---GILGFSQGAALA---AILAS 119
Query: 143 LGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVV 202
L G + + L+ + +SG+ P E P L G D VV
Sbjct: 120 LLEEGLPLESHPPLKFAILISGFRPREPKYA-------EYYSPPIQTPSLHVIGELDTVV 172
Query: 203 PYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVP 236
P + EK A + G GH+ VP
Sbjct: 173 PEERSEKLAEA--CKNSATVLE--HPG-GHF-VP 200
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This is a family of serine hydrolases. Length = 209 |
| >gnl|CDD|221720 pfam12697, Abhydrolase_6, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 1e-08
Identities = 52/210 (24%), Positives = 72/210 (34%), Gaps = 48/210 (22%)
Query: 37 IVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGP 96
+V LHG G + SW L E+L + + P P G SD P
Sbjct: 1 VVLLHGAGGSAESWRPLAEALA-AGYRVLAPDLP--------GHG---------DSDGPP 42
Query: 97 EDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNL 156
L+ AA +A LL V + G S+G AVAL A R +
Sbjct: 43 RTPYSLEDDAADLAALLDALGLG-PVVLVGHSLGGAVALA-----AAARRPERV------ 90
Query: 157 RAVVGLSGWLPGSRNLRNKIEGSHEAARRAA-------------SLPILLTHGLCDDVVP 203
+V +S L L + A RAA ++P+L+ HG D +VP
Sbjct: 91 AGLVLISPPLRDLEELLAADAAALLALLRAALLDADLREALARLTVPVLVIHGEDDPLVP 150
Query: 204 YKYGEKSANCLSISGFRHLTFKSFEGLGHY 233
+ + A L G GH
Sbjct: 151 PEAARRLAEAL-----PGAELVVLPGAGHL 175
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This family contains alpha/beta hydrolase enzymes of diverse specificity. Length = 187 |
| >gnl|CDD|221718 pfam12695, Abhydrolase_5, Alpha/beta hydrolase family | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 2e-06
Identities = 41/198 (20%), Positives = 60/198 (30%), Gaps = 53/198 (26%)
Query: 36 TIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDG 95
+V LHG G + +++ L +L + P G + G
Sbjct: 1 LVVLLHGAGGDPEAYAPLARALASRGYNVVAVDYP------------------GHGASLG 42
Query: 96 PEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVN 155
D E + A A ++ + G S+G VAL A R
Sbjct: 43 APDAEAVLADAPLDPE---------RIVLVGHSLGGGVALLLA-----ARDPRVK----- 83
Query: 156 LRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLS 215
A V L+ P ++P+L+ HG D VVP + E A L
Sbjct: 84 --AAVVLAAGDPPDA----------LDDLAKLTVPVLIIHGTRDGVVPPEEAEALAAALP 131
Query: 216 ISGFRHLTFKSFEGLGHY 233
EG GH
Sbjct: 132 ----GPAELVVIEGAGHS 145
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This family contains a diverse range of alpha/beta hydrolase enzymes. Length = 145 |
| >gnl|CDD|182555 PRK10566, PRK10566, esterase; Provisional | Back alignment and domain information |
|---|
Score = 38.0 bits (89), Expect = 0.003
Identities = 37/143 (25%), Positives = 52/143 (36%), Gaps = 36/143 (25%)
Query: 118 ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGL--SGWLPG-SRNL-- 172
D ++ +GG SMG AL + R+ P+ ++ V L SG+ +R L
Sbjct: 105 LDDRLAVGGASMGGMTAL-----GIMARH----PW---VKCVASLMGSGYFTSLARTLFP 152
Query: 173 ---RNKIEGSHEAARRAASL---------------PILLTHGLCDDVVPYKYGEKSANCL 214
E A L P+LL HGL DDVVP + L
Sbjct: 153 PLIPETAAQQAEFNNIVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQAL 212
Query: 215 SISGF-RHLTFKSFEGLGHYTVP 236
G ++LT G+ H P
Sbjct: 213 RERGLDKNLTCLWEPGVRHRITP 235
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Length = 249 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 257 | |||
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.97 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.95 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.94 | |
| KOG1455 | 313 | consensus Lysophospholipase [Lipid transport and m | 99.93 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 99.93 | |
| KOG2112 | 206 | consensus Lysophospholipase [Lipid transport and m | 99.93 | |
| PRK10566 | 249 | esterase; Provisional | 99.93 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 99.93 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.93 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.93 | |
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 99.92 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.92 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.92 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.92 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.92 | |
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.92 | |
| PLN02965 | 255 | Probable pheophorbidase | 99.92 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 99.91 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 99.91 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.9 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 99.9 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 99.9 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.9 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.9 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 99.9 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.89 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 99.89 | |
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.89 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 99.89 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.88 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.88 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 99.88 | |
| PLN02578 | 354 | hydrolase | 99.88 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.88 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 99.88 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 99.88 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.88 | |
| KOG1454 | 326 | consensus Predicted hydrolase/acyltransferase (alp | 99.88 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 99.88 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.88 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.87 | |
| PRK06489 | 360 | hypothetical protein; Provisional | 99.87 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.87 | |
| KOG4178 | 322 | consensus Soluble epoxide hydrolase [Lipid transpo | 99.87 | |
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 99.87 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.86 | |
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.86 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.86 | |
| KOG4409 | 365 | consensus Predicted hydrolase/acyltransferase (alp | 99.86 | |
| KOG1552 | 258 | consensus Predicted alpha/beta hydrolase [General | 99.85 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.85 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.85 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.84 | |
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.84 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.84 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.84 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.83 | |
| PLN02511 | 388 | hydrolase | 99.83 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.82 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.82 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.82 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.82 | |
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 99.81 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.79 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.79 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.78 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.78 | |
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 99.78 | |
| PRK10115 | 686 | protease 2; Provisional | 99.76 | |
| PLN00021 | 313 | chlorophyllase | 99.73 | |
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 99.73 | |
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 99.73 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.73 | |
| KOG2551 | 230 | consensus Phospholipase/carboxyhydrolase [Amino ac | 99.73 | |
| KOG4391 | 300 | consensus Predicted alpha/beta hydrolase BEM46 [Ge | 99.73 | |
| KOG3043 | 242 | consensus Predicted hydrolase related to dienelact | 99.72 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.72 | |
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 99.71 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.71 | |
| KOG2984 | 277 | consensus Predicted hydrolase [General function pr | 99.7 | |
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.7 | |
| KOG2382 | 315 | consensus Predicted alpha/beta hydrolase [General | 99.69 | |
| KOG4667 | 269 | consensus Predicted esterase [Lipid transport and | 99.67 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 99.66 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 99.64 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.62 | |
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.61 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.61 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 99.61 | |
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 99.61 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 99.6 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 99.6 | |
| KOG1515 | 336 | consensus Arylacetamide deacetylase [Defense mecha | 99.59 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 99.59 | |
| KOG2100 | 755 | consensus Dipeptidyl aminopeptidase [Posttranslati | 99.58 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 99.57 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 99.56 | |
| KOG2564 | 343 | consensus Predicted acetyltransferases and hydrola | 99.55 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 99.51 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 99.49 | |
| KOG3847 | 399 | consensus Phospholipase A2 (platelet-activating fa | 99.48 | |
| KOG1838 | 409 | consensus Alpha/beta hydrolase [General function p | 99.46 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 99.46 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 99.46 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.44 | |
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 99.43 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 99.42 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 99.42 | |
| PRK04940 | 180 | hypothetical protein; Provisional | 99.42 | |
| KOG4627 | 270 | consensus Kynurenine formamidase [Amino acid trans | 99.42 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.39 | |
| KOG2281 | 867 | consensus Dipeptidyl aminopeptidases/acylaminoacyl | 99.38 | |
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 99.38 | |
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.36 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 99.35 | |
| KOG3101 | 283 | consensus Esterase D [General function prediction | 99.35 | |
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 99.34 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 99.33 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 99.32 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 99.32 | |
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 99.31 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 99.31 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 99.29 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 99.29 | |
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 99.24 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 99.23 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 99.22 | |
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 99.22 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 99.19 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 99.18 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 99.18 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 99.17 | |
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 99.14 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 99.11 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 99.1 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 99.09 | |
| KOG2624 | 403 | consensus Triglyceride lipase-cholesterol esterase | 99.09 | |
| KOG3253 | 784 | consensus Predicted alpha/beta hydrolase [General | 99.08 | |
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 99.04 | |
| KOG3975 | 301 | consensus Uncharacterized conserved protein [Funct | 98.98 | |
| COG3150 | 191 | Predicted esterase [General function prediction on | 98.95 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 98.95 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 98.94 | |
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 98.92 | |
| KOG2237 | 712 | consensus Predicted serine protease [Posttranslati | 98.88 | |
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 98.84 | |
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 98.84 | |
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 98.78 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 98.78 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 98.75 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 98.75 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 98.73 | |
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 98.64 | |
| KOG2931 | 326 | consensus Differentiation-related gene 1 protein ( | 98.64 | |
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 98.6 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 98.56 | |
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 98.51 | |
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 98.5 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 98.5 | |
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 98.48 | |
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 98.48 | |
| smart00824 | 212 | PKS_TE Thioesterase. Peptide synthetases are invol | 98.4 | |
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 98.39 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 98.39 | |
| COG3946 | 456 | VirJ Type IV secretory pathway, VirJ component [In | 98.37 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 98.35 | |
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 98.32 | |
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 98.28 | |
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 98.26 | |
| KOG4840 | 299 | consensus Predicted hydrolases or acyltransferases | 98.22 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 98.22 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 98.17 | |
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 98.15 | |
| KOG3724 | 973 | consensus Negative regulator of COPII vesicle form | 98.15 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 98.11 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 98.06 | |
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 98.03 | |
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 98.03 | |
| KOG2565 | 469 | consensus Predicted hydrolases or acyltransferases | 98.01 | |
| KOG2541 | 296 | consensus Palmitoyl protein thioesterase [Lipid tr | 97.96 | |
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 97.94 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 97.89 | |
| PF04301 | 213 | DUF452: Protein of unknown function (DUF452); Inte | 97.88 | |
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 97.84 | |
| PLN02209 | 437 | serine carboxypeptidase | 97.79 | |
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 97.74 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 97.7 | |
| KOG1553 | 517 | consensus Predicted alpha/beta hydrolase BAT5 [Gen | 97.63 | |
| KOG1282 | 454 | consensus Serine carboxypeptidases (lysosomal cath | 97.54 | |
| KOG1516 | 545 | consensus Carboxylesterase and related proteins [G | 97.49 | |
| PLN02606 | 306 | palmitoyl-protein thioesterase | 97.47 | |
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 97.21 | |
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 97.14 | |
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 97.08 | |
| KOG2521 | 350 | consensus Uncharacterized conserved protein [Funct | 97.07 | |
| KOG3967 | 297 | consensus Uncharacterized conserved protein [Funct | 96.91 | |
| COG4287 | 507 | PqaA PhoPQ-activated pathogenicity-related protein | 96.91 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 96.89 | |
| KOG2183 | 492 | consensus Prolylcarboxypeptidase (angiotensinase C | 96.81 | |
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 96.77 | |
| TIGR03712 | 511 | acc_sec_asp2 accessory Sec system protein Asp2. Th | 96.5 | |
| KOG1551 | 371 | consensus Uncharacterized conserved protein [Funct | 96.5 | |
| cd00519 | 229 | Lipase_3 Lipase (class 3). Lipases are esterases t | 96.46 | |
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 96.4 | |
| KOG2369 | 473 | consensus Lecithin:cholesterol acyltransferase (LC | 96.27 | |
| PLN02162 | 475 | triacylglycerol lipase | 96.01 | |
| PLN00413 | 479 | triacylglycerol lipase | 95.97 | |
| PLN02310 | 405 | triacylglycerol lipase | 95.95 | |
| PLN02571 | 413 | triacylglycerol lipase | 95.95 | |
| PLN02454 | 414 | triacylglycerol lipase | 95.94 | |
| PLN02934 | 515 | triacylglycerol lipase | 95.87 | |
| PF01083 | 179 | Cutinase: Cutinase; InterPro: IPR000675 Aerial pla | 95.87 | |
| PLN02408 | 365 | phospholipase A1 | 95.85 | |
| PLN03037 | 525 | lipase class 3 family protein; Provisional | 95.65 | |
| PLN02324 | 415 | triacylglycerol lipase | 95.65 | |
| PLN02802 | 509 | triacylglycerol lipase | 95.34 | |
| PLN02753 | 531 | triacylglycerol lipase | 95.25 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 95.0 | |
| PF05576 | 448 | Peptidase_S37: PS-10 peptidase S37; InterPro: IPR0 | 94.82 | |
| PF05277 | 345 | DUF726: Protein of unknown function (DUF726); Inte | 94.82 | |
| PLN02761 | 527 | lipase class 3 family protein | 94.62 | |
| PLN02719 | 518 | triacylglycerol lipase | 94.62 | |
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 94.58 | |
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 94.5 | |
| KOG4372 | 405 | consensus Predicted alpha/beta hydrolase [General | 94.41 | |
| PLN02847 | 633 | triacylglycerol lipase | 94.39 | |
| KOG4540 | 425 | consensus Putative lipase essential for disintegra | 94.27 | |
| COG5153 | 425 | CVT17 Putative lipase essential for disintegration | 94.27 | |
| COG2939 | 498 | Carboxypeptidase C (cathepsin A) [Amino acid trans | 94.24 | |
| KOG4388 | 880 | consensus Hormone-sensitive lipase HSL [Lipid tran | 93.94 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 93.66 | |
| KOG4569 | 336 | consensus Predicted lipase [Lipid transport and me | 93.51 | |
| PF08237 | 225 | PE-PPE: PE-PPE domain; InterPro: IPR013228 The hum | 92.99 | |
| PF03283 | 361 | PAE: Pectinacetylesterase | 92.49 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 92.44 | |
| PF06850 | 202 | PHB_depo_C: PHB de-polymerase C-terminus; InterPro | 92.41 | |
| PLN02213 | 319 | sinapoylglucose-malate O-sinapoyltransferase/ carb | 91.98 | |
| KOG1283 | 414 | consensus Serine carboxypeptidases [Posttranslatio | 90.28 | |
| KOG2029 | 697 | consensus Uncharacterized conserved protein [Funct | 90.19 | |
| KOG4389 | 601 | consensus Acetylcholinesterase/Butyrylcholinestera | 89.83 | |
| PF10605 | 690 | 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: | 89.01 | |
| PF06441 | 112 | EHN: Epoxide hydrolase N terminus; InterPro: IPR01 | 88.93 | |
| KOG2182 | 514 | consensus Hydrolytic enzymes of the alpha/beta hyd | 88.37 | |
| COG2830 | 214 | Uncharacterized protein conserved in bacteria [Fun | 84.07 | |
| COG4553 | 415 | DepA Poly-beta-hydroxyalkanoate depolymerase [Lipi | 84.06 |
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-30 Score=192.27 Aligned_cols=207 Identities=39% Similarity=0.730 Sum_probs=146.3
Q ss_pred EEeCCCCCCceEEEEEccCCCCccchHHHhh-cCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHH
Q 025121 25 HVVRPKGKHQATIVWLHGLGDNGSSWSQLLE-SLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLD 103 (257)
Q Consensus 25 ~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~-~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 103 (257)
.+..+.++..++|||+||+|++...+..+.. .+......++.++.|........|....+||+..........+...+.
T Consensus 5 ~i~~~~~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~ 84 (216)
T PF02230_consen 5 RIIEPKGKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIE 84 (216)
T ss_dssp EEE--SST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHH
T ss_pred EEeCCCCCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHH
Confidence 4567788889999999999999977777666 445578999999988765555567767799988665554445566777
Q ss_pred HHHHHHHHHhcc----CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccc
Q 025121 104 ASAAHIANLLST----EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGS 179 (257)
Q Consensus 104 ~~~~~~~~~~~~----~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 179 (257)
+.+..+.++++. .....+|+|+|+|+||.+++.++.+ ++..++++++++|+++..........
T Consensus 85 ~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~-----------~p~~~~gvv~lsG~~~~~~~~~~~~~-- 151 (216)
T PF02230_consen 85 ESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALR-----------YPEPLAGVVALSGYLPPESELEDRPE-- 151 (216)
T ss_dssp HHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHC-----------TSSTSSEEEEES---TTGCCCHCCHC--
T ss_pred HHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHH-----------cCcCcCEEEEeecccccccccccccc--
Confidence 777766666653 3344699999999999999999995 48899999999999987654433221
Q ss_pred hHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 180 HEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 180 ~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
....+|++++||+.|+++|.+.++...+.+++.+. +++++.|+|.||.+..+.++.+.+||.+.+
T Consensus 152 -----~~~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~-~v~~~~~~g~gH~i~~~~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 152 -----ALAKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGA-NVEFHEYPGGGHEISPEELRDLREFLEKHI 216 (216)
T ss_dssp -----CCCTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT--GEEEEEETT-SSS--HHHHHHHHHHHHHH-
T ss_pred -----ccCCCcEEEEecCCCCcccHHHHHHHHHHHHhcCC-CEEEEEcCCCCCCCCHHHHHHHHHHHhhhC
Confidence 12278999999999999999999999999999988 899999999999999999999999998763
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.9e-26 Score=171.85 Aligned_cols=195 Identities=20% Similarity=0.234 Sum_probs=142.8
Q ss_pred CCCCCCceEEEEEccCCCCccchHHHhhcCCCC--ceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025121 28 RPKGKHQATIVWLHGLGDNGSSWSQLLESLPLP--NIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 28 ~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~--g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
++.+++.++||++||+|++...|..+++.|... .+.++.++.|.. ........||+...... .....++.+.
T Consensus 10 ~~~~~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~----~~~~~g~~W~~~~~~~~--~~~~~~~~~~ 83 (232)
T PRK11460 10 SPDKPAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEP----SGNGAGRQWFSVQGITE--DNRQARVAAI 83 (232)
T ss_pred CCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCC----cCCCCCcccccCCCCCc--cchHHHHHHH
Confidence 455667889999999999999999999888643 357777775532 11122357887643221 1222233333
Q ss_pred HHHHHH----HhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccch
Q 025121 106 AAHIAN----LLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSH 180 (257)
Q Consensus 106 ~~~~~~----~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 180 (257)
...+.+ +..+. ...++|+|+|||+||.+++.++.+. +..+++++++++.++....
T Consensus 84 ~~~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~-----------~~~~~~vv~~sg~~~~~~~--------- 143 (232)
T PRK11460 84 MPTFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAE-----------PGLAGRVIAFSGRYASLPE--------- 143 (232)
T ss_pred HHHHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhC-----------CCcceEEEEeccccccccc---------
Confidence 333333 22222 2335899999999999999998753 6678888888887642110
Q ss_pred HHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcCc
Q 025121 181 EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLGL 252 (257)
Q Consensus 181 ~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 252 (257)
.....+|++++||++|+++|++.++++.+.+++.+. +++++++++++|.+..+..+.+.+||.+.+..
T Consensus 144 ---~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~-~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l~~ 211 (232)
T PRK11460 144 ---TAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGG-DVTLDIVEDLGHAIDPRLMQFALDRLRYTVPK 211 (232)
T ss_pred ---cccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCC-CeEEEEECCCCCCCCHHHHHHHHHHHHHHcch
Confidence 113478999999999999999999999999998886 78999999999999999999999999998753
|
|
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.2e-25 Score=172.59 Aligned_cols=191 Identities=16% Similarity=0.168 Sum_probs=133.1
Q ss_pred eCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025121 27 VRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 27 ~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
+.|...++++|+++||++++...|..+++.|+..||.|+++|+||||.+..... ....+.+.+
T Consensus 18 ~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~-----------------~~~~~~~~~ 80 (276)
T PHA02857 18 WKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKM-----------------MIDDFGVYV 80 (276)
T ss_pred ccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccC-----------------CcCCHHHHH
Confidence 355456678888889999999999999999988899999999999876532110 011222223
Q ss_pred HHHHHHh---ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh------------
Q 025121 107 AHIANLL---STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN------------ 171 (257)
Q Consensus 107 ~~~~~~~---~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------------ 171 (257)
.++.+.+ .......+++|+||||||.+++.++.+. |+.++++|++++.......
T Consensus 81 ~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~-----------p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~ 149 (276)
T PHA02857 81 RDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKN-----------PNLFTAMILMSPLVNAEAVPRLNLLAAKLMG 149 (276)
T ss_pred HHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhC-----------ccccceEEEeccccccccccHHHHHHHHHHH
Confidence 3333333 2222234899999999999999999853 7789999999875321100
Q ss_pred --hh---------hcc-----------cc---------------------chHHHhhhcCCCEEEEccCCCCcccchhhH
Q 025121 172 --LR---------NKI-----------EG---------------------SHEAARRAASLPILLTHGLCDDVVPYKYGE 208 (257)
Q Consensus 172 --~~---------~~~-----------~~---------------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~ 208 (257)
.. ... .. ........+++|+++++|++|.++|++.+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~ 229 (276)
T PHA02857 150 IFYPNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAY 229 (276)
T ss_pred HhCCCCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHH
Confidence 00 000 00 001123457899999999999999999999
Q ss_pred HHHHHhhhcCceeeEEEEecCCCCccCHH-------HHHHHHHHHHHh
Q 025121 209 KSANCLSISGFRHLTFKSFEGLGHYTVPK-------EMDEVCNWLTAR 249 (257)
Q Consensus 209 ~~~~~l~~~~~~~~~~~~~~g~~H~~~~~-------~~~~~~~~l~~~ 249 (257)
.+.+.+.. ++++++++++||.+..| ..+++.+||.+.
T Consensus 230 ~l~~~~~~----~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 230 YFMQHANC----NREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred HHHHHccC----CceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 99888753 46899999999988732 457788888774
|
|
| >KOG1455 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3e-25 Score=165.94 Aligned_cols=188 Identities=18% Similarity=0.169 Sum_probs=136.9
Q ss_pred CCCceEEEEEccCCCCc-cchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 31 GKHQATIVWLHGLGDNG-SSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
.+++..|+++||++++. ..|..++..|+..||.|++.|++|||.+.... ....+++..++++
T Consensus 51 ~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~-----------------~yi~~~d~~v~D~ 113 (313)
T KOG1455|consen 51 TEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLH-----------------AYVPSFDLVVDDV 113 (313)
T ss_pred CCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCc-----------------ccCCcHHHHHHHH
Confidence 47888999999999887 56888999999999999999999987655221 1133334444444
Q ss_pred HHHhc-----cCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc---------------
Q 025121 110 ANLLS-----TEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--------------- 169 (257)
Q Consensus 110 ~~~~~-----~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------------- 169 (257)
..+++ .+....+.+|+||||||.+++.++.+. |..+.++|+++|.....
T Consensus 114 ~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~-----------p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~ 182 (313)
T KOG1455|consen 114 ISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKD-----------PNFWDGAILVAPMCKISEDTKPHPPVISILTL 182 (313)
T ss_pred HHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhC-----------CcccccceeeecccccCCccCCCcHHHHHHHH
Confidence 44333 233445999999999999999999954 77888888777632111
Q ss_pred --------hhhhhc-----------------------------------cc--cchHHHhhhcCCCEEEEccCCCCcccc
Q 025121 170 --------RNLRNK-----------------------------------IE--GSHEAARRAASLPILLTHGLCDDVVPY 204 (257)
Q Consensus 170 --------~~~~~~-----------------------------------~~--~~~~~~~~~~~~P~l~~~G~~D~~v~~ 204 (257)
...... ++ ..-+.+...+++|++++||++|.++.+
T Consensus 183 l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp 262 (313)
T KOG1455|consen 183 LSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDP 262 (313)
T ss_pred HHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCc
Confidence 000000 00 001124456789999999999999999
Q ss_pred hhhHHHHHHhhhcCceeeEEEEecCCCCccCH--------HHHHHHHHHHHHh
Q 025121 205 KYGEKSANCLSISGFRHLTFKSFEGLGHYTVP--------KEMDEVCNWLTAR 249 (257)
Q Consensus 205 ~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~--------~~~~~~~~~l~~~ 249 (257)
+.++.|++..... +.++++|||+-|.+.. ..+.+|++||.+.
T Consensus 263 ~~Sk~Lye~A~S~---DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 263 KVSKELYEKASSS---DKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred HHHHHHHHhccCC---CCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 9999999999876 7899999999998762 2467888898764
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.7e-25 Score=176.32 Aligned_cols=191 Identities=18% Similarity=0.160 Sum_probs=130.7
Q ss_pred CCCCceEEEEEccCCCCccc-hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025121 30 KGKHQATIVWLHGLGDNGSS-WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 30 ~~~~~~~vi~~HG~~~~~~~-~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
.++++++|||+||++++... |..+++.|++.||+|+++|+||||.+.... ....++.+.+++
T Consensus 83 ~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~-----------------~~~~~~~~~~~d 145 (349)
T PLN02385 83 NSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLH-----------------GYIPSFDDLVDD 145 (349)
T ss_pred CCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCC-----------------CCcCCHHHHHHH
Confidence 34577899999999988765 578888998789999999999887543210 001123333444
Q ss_pred HHHHhccC-----CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-------------
Q 025121 109 IANLLSTE-----PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR------------- 170 (257)
Q Consensus 109 ~~~~~~~~-----~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------------- 170 (257)
+.++++.. ....+++|+||||||.+++.++.+. |..+.++|++++......
T Consensus 146 v~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~-----------p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~ 214 (349)
T PLN02385 146 VIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQ-----------PNAWDGAILVAPMCKIADDVVPPPLVLQILI 214 (349)
T ss_pred HHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhC-----------cchhhheeEecccccccccccCchHHHHHHH
Confidence 44333221 1234899999999999999999854 778888888876421000
Q ss_pred ---------------hhhhc-cc----------------c---------------chHHHhhhcCCCEEEEccCCCCccc
Q 025121 171 ---------------NLRNK-IE----------------G---------------SHEAARRAASLPILLTHGLCDDVVP 203 (257)
Q Consensus 171 ---------------~~~~~-~~----------------~---------------~~~~~~~~~~~P~l~~~G~~D~~v~ 203 (257)
.+... .. . ........+++|+|+++|++|.++|
T Consensus 215 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~ 294 (349)
T PLN02385 215 LLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTD 294 (349)
T ss_pred HHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccC
Confidence 00000 00 0 0001223578999999999999999
Q ss_pred chhhHHHHHHhhhcCceeeEEEEecCCCCccCHH--------HHHHHHHHHHHhcC
Q 025121 204 YKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPK--------EMDEVCNWLTARLG 251 (257)
Q Consensus 204 ~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~--------~~~~~~~~l~~~l~ 251 (257)
++.++.+++.+... +.+++++++++|.+..+ ..+.+.+||.+.+.
T Consensus 295 ~~~~~~l~~~~~~~---~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 295 PSVSKFLYEKASSS---DKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred hHHHHHHHHHcCCC---CceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 99999999988643 56899999999988622 45678889887764
|
|
| >KOG2112 consensus Lysophospholipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-24 Score=153.66 Aligned_cols=197 Identities=54% Similarity=0.973 Sum_probs=171.9
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
...+|||+||.|.+...|..+.+.+...+...++|..|.++.....|-....||+.-..+.+...+.+.+...++.+..+
T Consensus 2 h~atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 2 HTATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred ceEEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999999999999999999999999877777777888888888888888
Q ss_pred hccCC----CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCC-chhhhhccccchHHHhhhc
Q 025121 113 LSTEP----ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPG-SRNLRNKIEGSHEAARRAA 187 (257)
Q Consensus 113 ~~~~~----~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 187 (257)
++++. ..++|++.|+||||.+++..+. .++..+.+++..+++.+. ...+....... .
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~-----------~~~~~l~G~~~~s~~~p~~~~~~~~~~~~~-------~ 143 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALALYSAL-----------TYPKALGGIFALSGFLPRASIGLPGWLPGV-------N 143 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHHHHHHh-----------ccccccceeeccccccccchhhccCCcccc-------C
Confidence 87653 3358999999999999999999 458889999999999883 33333332211 1
Q ss_pred CCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHH
Q 025121 188 SLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTA 248 (257)
Q Consensus 188 ~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~ 248 (257)
.+|++..||+.|++||....+...+.++..+. .++++.|+|.+|...++.++++..|+.+
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~-~~~f~~y~g~~h~~~~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGV-RVTFKPYPGLGHSTSPQELDDLKSWIKT 203 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcCC-ceeeeecCCccccccHHHHHHHHHHHHH
Confidence 89999999999999999999999999999998 4999999999999999999999999987
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-24 Score=165.52 Aligned_cols=198 Identities=23% Similarity=0.316 Sum_probs=129.4
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCC--CcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGG--FPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g--~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
++.|+||++||++++...|..+++.|++.||.|+++|+|++|.+.... .....|+.. ....+.+....+
T Consensus 25 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~ 95 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQI---------LLQNMQEFPTLR 95 (249)
T ss_pred CCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHH---------HHHHHHHHHHHH
Confidence 356899999999999988999999998889999999999876532110 000111100 001122222222
Q ss_pred HHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEe--ccCCCCc-hhh-hh----------
Q 025121 110 ANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGL--SGWLPGS-RNL-RN---------- 174 (257)
Q Consensus 110 ~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~-~~~-~~---------- 174 (257)
..+.+.. ...++++++|||+||.+++.++.+. +. +.+.+.+ ++++... ... ..
T Consensus 96 ~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~-----------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (249)
T PRK10566 96 AAIREEGWLLDDRLAVGGASMGGMTALGIMARH-----------PW-VKCVASLMGSGYFTSLARTLFPPLIPETAAQQA 163 (249)
T ss_pred HHHHhcCCcCccceeEEeecccHHHHHHHHHhC-----------CC-eeEEEEeeCcHHHHHHHHHhcccccccccccHH
Confidence 2222222 2345999999999999999998753 33 4433322 2221100 000 00
Q ss_pred --------ccccchHHHhhhc-CCCEEEEccCCCCcccchhhHHHHHHhhhcCce-eeEEEEecCCCCccCHHHHHHHHH
Q 025121 175 --------KIEGSHEAARRAA-SLPILLTHGLCDDVVPYKYGEKSANCLSISGFR-HLTFKSFEGLGHYTVPKEMDEVCN 244 (257)
Q Consensus 175 --------~~~~~~~~~~~~~-~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~-~~~~~~~~g~~H~~~~~~~~~~~~ 244 (257)
............+ ++|+|++||++|.++|++.++.+.+.++.++.+ ++++..+++.+|.+..+..+.+.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~~~~~~~~~~ 243 (249)
T PRK10566 164 EFNNIVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRITPEALDAGVA 243 (249)
T ss_pred HHHHHHHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccCHHHHHHHHH
Confidence 0000001112233 689999999999999999999999999987752 478899999999999999999999
Q ss_pred HHHHhc
Q 025121 245 WLTARL 250 (257)
Q Consensus 245 ~l~~~l 250 (257)
||++.+
T Consensus 244 fl~~~~ 249 (249)
T PRK10566 244 FFRQHL 249 (249)
T ss_pred HHHhhC
Confidence 998754
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-24 Score=168.49 Aligned_cols=185 Identities=16% Similarity=0.112 Sum_probs=128.7
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
+..++|||+||++++...|..+++.|. .+|+|+++|+||+|.+..+. ...++.+.++++.+
T Consensus 23 ~~~~plvllHG~~~~~~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~------------------~~~~~~~~~~~~~~ 83 (276)
T TIGR02240 23 EGLTPLLIFNGIGANLELVFPFIEALD-PDLEVIAFDVPGVGGSSTPR------------------HPYRFPGLAKLAAR 83 (276)
T ss_pred CCCCcEEEEeCCCcchHHHHHHHHHhc-cCceEEEECCCCCCCCCCCC------------------CcCcHHHHHHHHHH
Confidence 344689999999999999999999997 57999999999887543211 11234555566666
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc------h---------hh----
Q 025121 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS------R---------NL---- 172 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~---------~~---- 172 (257)
+++..... +++|+||||||.+++.++.+. |+++++++++++..... . ..
T Consensus 84 ~i~~l~~~-~~~LvG~S~GG~va~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (276)
T TIGR02240 84 MLDYLDYG-QVNAIGVSWGGALAQQFAHDY-----------PERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPS 151 (276)
T ss_pred HHHHhCcC-ceEEEEECHHHHHHHHHHHHC-----------HHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccc
Confidence 66654333 899999999999999999964 66777777665432100 0 00
Q ss_pred ------h---------------h---ccc----------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHH
Q 025121 173 ------R---------------N---KIE----------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSAN 212 (257)
Q Consensus 173 ------~---------------~---~~~----------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~ 212 (257)
. . ... .........+++|+++++|++|.++|++.++++.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~ 231 (276)
T TIGR02240 152 HGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAW 231 (276)
T ss_pred cccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHH
Confidence 0 0 000 00011235678999999999999999999999998
Q ss_pred HhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcCcC
Q 025121 213 CLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLGLE 253 (257)
Q Consensus 213 ~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~~ 253 (257)
.++ +.+++++++ ||..+.+..+.+.+.+.+++...
T Consensus 232 ~~~-----~~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 232 RIP-----NAELHIIDD-GHLFLITRAEAVAPIIMKFLAEE 266 (276)
T ss_pred hCC-----CCEEEEEcC-CCchhhccHHHHHHHHHHHHHHh
Confidence 887 567888886 99988666666666555555443
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.2e-24 Score=169.31 Aligned_cols=195 Identities=16% Similarity=0.110 Sum_probs=132.3
Q ss_pred CCceEEEEEccCCCCcc-chHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGS-SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
+++++|||+||++.+.. .|..++..|+..||+|+++|+||||.+.... . .......+.+++..+.
T Consensus 57 ~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~----~----------~~~~~~~~~~D~~~~i 122 (330)
T PLN02298 57 PPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLR----A----------YVPNVDLVVEDCLSFF 122 (330)
T ss_pred CCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCcc----c----------cCCCHHHHHHHHHHHH
Confidence 56789999999987653 4666777888789999999999987653110 0 0111233333344444
Q ss_pred HHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-------------hhhh-
Q 025121 111 NLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR-------------NLRN- 174 (257)
Q Consensus 111 ~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------------~~~~- 174 (257)
+.+... ....+++|+||||||.+++.++.+ +|.+++++|+++++..... ....
T Consensus 123 ~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~-----------~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (330)
T PLN02298 123 NSVKQREEFQGLPRFLYGESMGGAICLLIHLA-----------NPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFVARF 191 (330)
T ss_pred HHHHhcccCCCCCEEEEEecchhHHHHHHHhc-----------CcccceeEEEecccccCCcccCCchHHHHHHHHHHHH
Confidence 444322 222479999999999999999884 3778999998877532110 0000
Q ss_pred -----------cc--------------------ccc---------------hHHHhhhcCCCEEEEccCCCCcccchhhH
Q 025121 175 -----------KI--------------------EGS---------------HEAARRAASLPILLTHGLCDDVVPYKYGE 208 (257)
Q Consensus 175 -----------~~--------------------~~~---------------~~~~~~~~~~P~l~~~G~~D~~v~~~~~~ 208 (257)
.+ ... .......+++|+|++||++|.++|++.++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp~~~~~ 271 (330)
T PLN02298 192 LPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTDPDVSR 271 (330)
T ss_pred CCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCCHHHHH
Confidence 00 000 01123457899999999999999999999
Q ss_pred HHHHHhhhcCceeeEEEEecCCCCccCH--------HHHHHHHHHHHHhcCcCC
Q 025121 209 KSANCLSISGFRHLTFKSFEGLGHYTVP--------KEMDEVCNWLTARLGLEG 254 (257)
Q Consensus 209 ~~~~~l~~~~~~~~~~~~~~g~~H~~~~--------~~~~~~~~~l~~~l~~~~ 254 (257)
.+++.++.. +.+++++++++|.+.. +..+.+.+||.+.+....
T Consensus 272 ~l~~~i~~~---~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~~ 322 (330)
T PLN02298 272 ALYEEAKSE---DKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTGKA 322 (330)
T ss_pred HHHHHhccC---CceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCCC
Confidence 999988643 5689999999999752 235678899998876543
|
|
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-24 Score=165.35 Aligned_cols=192 Identities=14% Similarity=0.091 Sum_probs=134.2
Q ss_pred cccccCCCCCceEEeCC--CCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCC-CcccCCCCcccccccCC
Q 025121 13 RAARRTFEFGRTHVVRP--KGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTR-PVAILGGFPCTAWFDVG 89 (257)
Q Consensus 13 ~~~~~~~~~~~~~~~~~--~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~-g~~~~~g~~~~~w~~~~ 89 (257)
.....+..+-.++..+. ..++.++||+.||+++....+..+++.|+++||.|+.+|.+++ |.+ +|. +..
T Consensus 14 ~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS--~G~-----~~~- 85 (307)
T PRK13604 14 ICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLS--SGT-----IDE- 85 (307)
T ss_pred EEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCC--CCc-----ccc-
Confidence 34445666666777665 3456789999999999887799999999999999999998876 644 221 100
Q ss_pred CCCCCCCCchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc
Q 025121 90 ELSDDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS 169 (257)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 169 (257)
. .... ...++..+.++++.... .+|+|+||||||.+++..|. ..+++++|+.+|+....
T Consensus 86 -~--t~s~----g~~Dl~aaid~lk~~~~-~~I~LiG~SmGgava~~~A~-------------~~~v~~lI~~sp~~~l~ 144 (307)
T PRK13604 86 -F--TMSI----GKNSLLTVVDWLNTRGI-NNLGLIAASLSARIAYEVIN-------------EIDLSFLITAVGVVNLR 144 (307)
T ss_pred -C--cccc----cHHHHHHHHHHHHhcCC-CceEEEEECHHHHHHHHHhc-------------CCCCCEEEEcCCcccHH
Confidence 0 0001 13344444455544433 48999999999999877765 33588899999876533
Q ss_pred hhhhhccc---------------------------------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHH
Q 025121 170 RNLRNKIE---------------------------------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKS 210 (257)
Q Consensus 170 ~~~~~~~~---------------------------------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~ 210 (257)
+.+..... ..+.......+.|+|++||++|.+||++.++.+
T Consensus 145 d~l~~~~~~~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l 224 (307)
T PRK13604 145 DTLERALGYDYLSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDL 224 (307)
T ss_pred HHHHHhhhcccccCcccccccccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHH
Confidence 22110000 001122445679999999999999999999999
Q ss_pred HHHhhhcCceeeEEEEecCCCCccCH
Q 025121 211 ANCLSISGFRHLTFKSFEGLGHYTVP 236 (257)
Q Consensus 211 ~~~l~~~~~~~~~~~~~~g~~H~~~~ 236 (257)
++.++.. +++++++||++|.+.+
T Consensus 225 ~e~~~s~---~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 225 LDSIRSE---QCKLYSLIGSSHDLGE 247 (307)
T ss_pred HHHhccC---CcEEEEeCCCccccCc
Confidence 9998754 6799999999999773
|
|
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.8e-24 Score=167.61 Aligned_cols=196 Identities=19% Similarity=0.200 Sum_probs=136.5
Q ss_pred eCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025121 27 VRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 27 ~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
+...+++.++|||+||++++...|..++..|+ ..++|+++|+||+|.+..... . ........++.+.+
T Consensus 22 y~~~G~~~~~vlllHG~~~~~~~w~~~~~~L~-~~~~vi~~DlpG~G~S~~~~~--------~---~~~~~~~~~~~~~a 89 (294)
T PLN02824 22 YQRAGTSGPALVLVHGFGGNADHWRKNTPVLA-KSHRVYAIDLLGYGYSDKPNP--------R---SAPPNSFYTFETWG 89 (294)
T ss_pred EEEcCCCCCeEEEECCCCCChhHHHHHHHHHH-hCCeEEEEcCCCCCCCCCCcc--------c---cccccccCCHHHHH
Confidence 33344345799999999999999999999997 457999999998875532210 0 00011234567777
Q ss_pred HHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc---------hh----hh
Q 025121 107 AHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS---------RN----LR 173 (257)
Q Consensus 107 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---------~~----~~ 173 (257)
+++.+++++.... +++|+||||||.+++.++.+. |++++++|++++..... .. +.
T Consensus 90 ~~l~~~l~~l~~~-~~~lvGhS~Gg~va~~~a~~~-----------p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~ 157 (294)
T PLN02824 90 EQLNDFCSDVVGD-PAFVICNSVGGVVGLQAAVDA-----------PELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQ 157 (294)
T ss_pred HHHHHHHHHhcCC-CeEEEEeCHHHHHHHHHHHhC-----------hhheeEEEEECCCcccccccccchhhhHHHHHHH
Confidence 7887877766544 999999999999999999954 88899999887532100 00 00
Q ss_pred -----------------------hc----ccc-----------------------------------chHHHhhhcCCCE
Q 025121 174 -----------------------NK----IEG-----------------------------------SHEAARRAASLPI 191 (257)
Q Consensus 174 -----------------------~~----~~~-----------------------------------~~~~~~~~~~~P~ 191 (257)
.. ... ........+++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 237 (294)
T PLN02824 158 NLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPV 237 (294)
T ss_pred HHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCe
Confidence 00 000 0011234568999
Q ss_pred EEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 192 LLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 192 l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
++++|++|..+|.+.++.+.+..+ +.++++++++||.++.+..+.+.+-|.+++.
T Consensus 238 lvi~G~~D~~~~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (294)
T PLN02824 238 LIAWGEKDPWEPVELGRAYANFDA-----VEDFIVLPGVGHCPQDEAPELVNPLIESFVA 292 (294)
T ss_pred EEEEecCCCCCChHHHHHHHhcCC-----ccceEEeCCCCCChhhhCHHHHHHHHHHHHh
Confidence 999999999999988877666554 5689999999999987776666666665553
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-23 Score=167.57 Aligned_cols=194 Identities=12% Similarity=0.018 Sum_probs=131.5
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
.++++||++||++++...|..++..+...||.|+++|+||||.+...-. ........++.+.++++..
T Consensus 52 ~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~------------~~~~~~~~~~~~~~~d~~~ 119 (330)
T PRK10749 52 HHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLD------------DPHRGHVERFNDYVDDLAA 119 (330)
T ss_pred CCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCC------------CCCcCccccHHHHHHHHHH
Confidence 4567999999999999899999988878999999999999876532100 0000011234444445444
Q ss_pred Hhcc---CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc----hh--------h----
Q 025121 112 LLST---EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS----RN--------L---- 172 (257)
Q Consensus 112 ~~~~---~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~--------~---- 172 (257)
+++. .....+++++||||||.+++.++.+. ++.++++|++++..... .. .
T Consensus 120 ~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~-----------p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~ 188 (330)
T PRK10749 120 FWQQEIQPGPYRKRYALAHSMGGAILTLFLQRH-----------PGVFDAIALCAPMFGIVLPLPSWMARRILNWAEGHP 188 (330)
T ss_pred HHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhC-----------CCCcceEEEECchhccCCCCCcHHHHHHHHHHHHhc
Confidence 4433 22234899999999999999999854 77888888887643110 00 0
Q ss_pred --------------------------h-------hccccch----------------------HHHhhhcCCCEEEEccC
Q 025121 173 --------------------------R-------NKIEGSH----------------------EAARRAASLPILLTHGL 197 (257)
Q Consensus 173 --------------------------~-------~~~~~~~----------------------~~~~~~~~~P~l~~~G~ 197 (257)
. +.+...+ ......+++|+|+++|+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~ 268 (330)
T PRK10749 189 RIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQAE 268 (330)
T ss_pred CCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEeC
Confidence 0 0000000 01124568999999999
Q ss_pred CCCcccchhhHHHHHHhhhcCc--eeeEEEEecCCCCccCHH-------HHHHHHHHHHH
Q 025121 198 CDDVVPYKYGEKSANCLSISGF--RHLTFKSFEGLGHYTVPK-------EMDEVCNWLTA 248 (257)
Q Consensus 198 ~D~~v~~~~~~~~~~~l~~~~~--~~~~~~~~~g~~H~~~~~-------~~~~~~~~l~~ 248 (257)
+|.+++++.++.+++.++..+. +++++++++|++|.+..| .++.+.+||.+
T Consensus 269 ~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 269 EERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNR 328 (330)
T ss_pred CCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhh
Confidence 9999999999999999876542 256899999999987632 34566777654
|
|
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-23 Score=162.69 Aligned_cols=185 Identities=19% Similarity=0.200 Sum_probs=133.3
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
...|+|||+||++++...|..++..|. .+|+|+++|+||+|.+... .....++.+.++++.+
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~-----------------~~~~~~~~~~~~~~~~ 72 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAPQLDVLT-QRFHVVTYDHRGTGRSPGE-----------------LPPGYSIAHMADDVLQ 72 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHHHHHHHH-hccEEEEEcCCCCCCCCCC-----------------CcccCCHHHHHHHHHH
Confidence 456799999999999999999888886 6799999999987654311 1112345666677777
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh------------------
Q 025121 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR------------------ 173 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------------------ 173 (257)
+++..... +++++||||||.+++.++.+. ++.++++|+++++........
T Consensus 73 ~i~~~~~~-~~~l~G~S~Gg~~a~~~a~~~-----------~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (257)
T TIGR03611 73 LLDALNIE-RFHFVGHALGGLIGLQLALRY-----------PERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAY 140 (257)
T ss_pred HHHHhCCC-cEEEEEechhHHHHHHHHHHC-----------hHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchh
Confidence 77655433 899999999999999999854 667888887776432210000
Q ss_pred ---------------h-----------ccc-----------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHH
Q 025121 174 ---------------N-----------KIE-----------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKS 210 (257)
Q Consensus 174 ---------------~-----------~~~-----------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~ 210 (257)
. ... .........+++|+++++|++|.++|++.++.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~ 220 (257)
T TIGR03611 141 VHAQALFLYPADWISENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRL 220 (257)
T ss_pred hhhhhhhhccccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHH
Confidence 0 000 000112345689999999999999999998888
Q ss_pred HHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 211 ANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 211 ~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
.+.++ +.+++.++++||.+..+..+.+.+.+.++++
T Consensus 221 ~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 221 AAALP-----NAQLKLLPYGGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred HHhcC-----CceEEEECCCCCCccccCHHHHHHHHHHHhc
Confidence 88876 5688999999999886666666666666553
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-23 Score=163.40 Aligned_cols=194 Identities=18% Similarity=0.196 Sum_probs=138.2
Q ss_pred EeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCccc--CCCCcccccccCCCCCCCCCCchhhHH
Q 025121 26 VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAI--LGGFPCTAWFDVGELSDDGPEDWEGLD 103 (257)
Q Consensus 26 ~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~--~~g~~~~~w~~~~~~~~~~~~~~~~~~ 103 (257)
.+.+..++..+||++||++++...|..++..|...||.|++.|+||||.+. ..| ....+.
T Consensus 26 ~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg------------------~~~~f~ 87 (298)
T COG2267 26 TWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRG------------------HVDSFA 87 (298)
T ss_pred eecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcC------------------CchhHH
Confidence 344444555799999999999999999999999999999999999998764 222 122344
Q ss_pred HHHHHHHHHhccC---CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch----------
Q 025121 104 ASAAHIANLLSTE---PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR---------- 170 (257)
Q Consensus 104 ~~~~~~~~~~~~~---~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------- 170 (257)
+...++..+++.. ....+++|+||||||.+++.++.+. +..+.++|+.+|.+....
T Consensus 88 ~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~-----------~~~i~~~vLssP~~~l~~~~~~~~~~~~ 156 (298)
T COG2267 88 DYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARY-----------PPRIDGLVLSSPALGLGGAILRLILARL 156 (298)
T ss_pred HHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhC-----------CccccEEEEECccccCChhHHHHHHHHH
Confidence 4455554444433 3446999999999999999999964 788999999888643330
Q ss_pred ---------------------hhhhccccch---------------------------------HHHhhhcCCCEEEEcc
Q 025121 171 ---------------------NLRNKIEGSH---------------------------------EAARRAASLPILLTHG 196 (257)
Q Consensus 171 ---------------------~~~~~~~~~~---------------------------------~~~~~~~~~P~l~~~G 196 (257)
.......+.. ......+++|+|+++|
T Consensus 157 ~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g 236 (298)
T COG2267 157 ALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQG 236 (298)
T ss_pred hcccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEec
Confidence 0000000000 0013456899999999
Q ss_pred CCCCccc-chhhHHHHHHhhhcCceeeEEEEecCCCCccCH-------HHHHHHHHHHHHhcC
Q 025121 197 LCDDVVP-YKYGEKSANCLSISGFRHLTFKSFEGLGHYTVP-------KEMDEVCNWLTARLG 251 (257)
Q Consensus 197 ~~D~~v~-~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~-------~~~~~~~~~l~~~l~ 251 (257)
++|.+++ .+...++++.+... ++++++++|+.|.+.. +.++.+.+|+.+...
T Consensus 237 ~~D~vv~~~~~~~~~~~~~~~~---~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 237 GDDRVVDNVEGLARFFERAGSP---DKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred CCCccccCcHHHHHHHHhcCCC---CceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 9999999 56666666666554 6799999999998763 346777777776554
|
|
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.9e-23 Score=151.70 Aligned_cols=194 Identities=28% Similarity=0.382 Sum_probs=146.8
Q ss_pred CCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025121 28 RPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 28 ~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
.+.++..|+||++||.|++..++.+..+.+. .++.++.+..+-. ..++.+...|++.+..+ ...........++
T Consensus 12 ~~~~p~~~~iilLHG~Ggde~~~~~~~~~~~-P~~~~is~rG~v~---~~g~~~~f~~~~~~~~d--~edl~~~~~~~~~ 85 (207)
T COG0400 12 KPGDPAAPLLILLHGLGGDELDLVPLPELIL-PNATLVSPRGPVA---ENGGPRFFRRYDEGSFD--QEDLDLETEKLAE 85 (207)
T ss_pred CCCCCCCcEEEEEecCCCChhhhhhhhhhcC-CCCeEEcCCCCcc---ccCcccceeecCCCccc--hhhHHHHHHHHHH
Confidence 3455667799999999999999888777765 6789998876532 33455555555544332 1111222333344
Q ss_pred HHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhhh
Q 025121 108 HIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRA 186 (257)
Q Consensus 108 ~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (257)
.+.....+. .+.++++++|+|.|+.+++.+..+ ++..++++++++|.++..... ....
T Consensus 86 ~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~-----------~~~~~~~ail~~g~~~~~~~~----------~~~~ 144 (207)
T COG0400 86 FLEELAEEYGIDSSRIILIGFSQGANIALSLGLT-----------LPGLFAGAILFSGMLPLEPEL----------LPDL 144 (207)
T ss_pred HHHHHHHHhCCChhheEEEecChHHHHHHHHHHh-----------CchhhccchhcCCcCCCCCcc----------cccc
Confidence 444444433 334699999999999999999995 488999999999988876541 1235
Q ss_pred cCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 187 ASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 187 ~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
..+|++++||+.|++||...+.++.+.+++.|. +++...++ +||.+..+.++.+.+|+...+
T Consensus 145 ~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~-~v~~~~~~-~GH~i~~e~~~~~~~wl~~~~ 206 (207)
T COG0400 145 AGTPILLSHGTEDPVVPLALAEALAEYLTASGA-DVEVRWHE-GGHEIPPEELEAARSWLANTL 206 (207)
T ss_pred CCCeEEEeccCcCCccCHHHHHHHHHHHHHcCC-CEEEEEec-CCCcCCHHHHHHHHHHHHhcc
Confidence 689999999999999999999999999999988 89999999 699999999999999998754
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-23 Score=169.66 Aligned_cols=197 Identities=17% Similarity=0.173 Sum_probs=136.8
Q ss_pred CCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 30 KGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 30 ~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
.++++++|||+||++++...|..+++.|++.||.|+++|+||||.+.... ........+.+++..+
T Consensus 132 ~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~--------------~~~~~~~~~~~Dl~~~ 197 (395)
T PLN02652 132 AGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLH--------------GYVPSLDYVVEDTEAF 197 (395)
T ss_pred CCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--------------CCCcCHHHHHHHHHHH
Confidence 35667899999999999888999999998889999999999887543210 0011233334444555
Q ss_pred HHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh------------------
Q 025121 110 ANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN------------------ 171 (257)
Q Consensus 110 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------------------ 171 (257)
.+.+.......+++|+||||||.+++.++.+. ..++.+.++|+.++++.....
T Consensus 198 l~~l~~~~~~~~i~lvGhSmGG~ial~~a~~p---------~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~p~~ 268 (395)
T PLN02652 198 LEKIRSENPGVPCFLFGHSTGGAVVLKAASYP---------SIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVAPRF 268 (395)
T ss_pred HHHHHHhCCCCCEEEEEECHHHHHHHHHHhcc---------CcccccceEEEECcccccccchHHHHHHHHHHHHhCCCC
Confidence 55554433334899999999999999877531 123578888888876421100
Q ss_pred ------------------hhhcccc-------c--------------hHHHhhhcCCCEEEEccCCCCcccchhhHHHHH
Q 025121 172 ------------------LRNKIEG-------S--------------HEAARRAASLPILLTHGLCDDVVPYKYGEKSAN 212 (257)
Q Consensus 172 ------------------~~~~~~~-------~--------------~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~ 212 (257)
....+.. . .......+++|+|++||++|.++|++.++.+++
T Consensus 269 ~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~ 348 (395)
T PLN02652 269 QFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYN 348 (395)
T ss_pred cccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHH
Confidence 0000000 0 001224468999999999999999999999999
Q ss_pred HhhhcCceeeEEEEecCCCCccC-----HHHHHHHHHHHHHhcCc
Q 025121 213 CLSISGFRHLTFKSFEGLGHYTV-----PKEMDEVCNWLTARLGL 252 (257)
Q Consensus 213 ~l~~~~~~~~~~~~~~g~~H~~~-----~~~~~~~~~~l~~~l~~ 252 (257)
.+... +.+++++++++|.+. .+..+.+.+||.+.++.
T Consensus 349 ~~~~~---~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~~ 390 (395)
T PLN02652 349 EAASR---HKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLDL 390 (395)
T ss_pred hcCCC---CceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhhc
Confidence 87653 568899999999874 34578899999987764
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-23 Score=161.69 Aligned_cols=184 Identities=14% Similarity=0.142 Sum_probs=133.4
Q ss_pred eEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhc
Q 025121 35 ATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLS 114 (257)
Q Consensus 35 ~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (257)
..|||+||++.+...|..++..|...+|+|+++|+||+|.+.... ....++.+.++++.++++
T Consensus 4 ~~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~-----------------~~~~~~~~~a~dl~~~l~ 66 (255)
T PLN02965 4 IHFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDS-----------------NTVSSSDQYNRPLFALLS 66 (255)
T ss_pred eEEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCc-----------------cccCCHHHHHHHHHHHHH
Confidence 469999999999999999999997689999999999887542111 112345666777777777
Q ss_pred cCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc-----hh------------------
Q 025121 115 TEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS-----RN------------------ 171 (257)
Q Consensus 115 ~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~------------------ 171 (257)
......+++|+||||||.+++.++.++ |+++++++++++..+.. ..
T Consensus 67 ~l~~~~~~~lvGhSmGG~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (255)
T PLN02965 67 DLPPDHKVILVGHSIGGGSVTEALCKF-----------TDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGE 135 (255)
T ss_pred hcCCCCCEEEEecCcchHHHHHHHHhC-----------chheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeecc
Confidence 654324899999999999999999964 77787777765431100 00
Q ss_pred --------------hh-hc-cccch-------------------------HHHhhhcCCCEEEEccCCCCcccchhhHHH
Q 025121 172 --------------LR-NK-IEGSH-------------------------EAARRAASLPILLTHGLCDDVVPYKYGEKS 210 (257)
Q Consensus 172 --------------~~-~~-~~~~~-------------------------~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~ 210 (257)
.. .. ..... ......+++|+++++|++|..+|++.++.+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~ 215 (255)
T PLN02965 136 GPDKPPTGIMMKPEFVRHYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVM 215 (255)
T ss_pred CCCCCcchhhcCHHHHHHHHhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHH
Confidence 00 00 00000 001124789999999999999999999999
Q ss_pred HHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 211 ANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 211 ~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
.+.++ +.++++++++||.++.+..+.+.+.|.++++
T Consensus 216 ~~~~~-----~a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~ 251 (255)
T PLN02965 216 VENWP-----PAQTYVLEDSDHSAFFSVPTTLFQYLLQAVS 251 (255)
T ss_pred HHhCC-----cceEEEecCCCCchhhcCHHHHHHHHHHHHH
Confidence 99887 6689999999999997777777766666543
|
|
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.5e-23 Score=163.71 Aligned_cols=196 Identities=12% Similarity=0.058 Sum_probs=134.2
Q ss_pred EEeCCCCC-CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHH
Q 025121 25 HVVRPKGK-HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLD 103 (257)
Q Consensus 25 ~~~~~~~~-~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 103 (257)
+.+...+. ..++|||+||++++...|..+++.|.+.||+|+++|+||+|.+.... .....++.
T Consensus 36 i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~----------------~~~~~~~~ 99 (302)
T PRK00870 36 MHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPT----------------RREDYTYA 99 (302)
T ss_pred EEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC----------------CcccCCHH
Confidence 33444333 35799999999999999999999998679999999999887543211 00123456
Q ss_pred HHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh------------
Q 025121 104 ASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN------------ 171 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------------ 171 (257)
+.++++.+++++.... ++.|+||||||.+++.++.+. |+++.+++++++.++....
T Consensus 100 ~~a~~l~~~l~~l~~~-~v~lvGhS~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 167 (302)
T PRK00870 100 RHVEWMRSWFEQLDLT-DVTLVCQDWGGLIGLRLAAEH-----------PDRFARLVVANTGLPTGDGPMPDAFWAWRAF 167 (302)
T ss_pred HHHHHHHHHHHHcCCC-CEEEEEEChHHHHHHHHHHhC-----------hhheeEEEEeCCCCCCccccchHHHhhhhcc
Confidence 6777777777765444 899999999999999999854 7778888777643221000
Q ss_pred ------------------------hhhccc---------c----------------ch------HHHhhhcCCCEEEEcc
Q 025121 172 ------------------------LRNKIE---------G----------------SH------EAARRAASLPILLTHG 196 (257)
Q Consensus 172 ------------------------~~~~~~---------~----------------~~------~~~~~~~~~P~l~~~G 196 (257)
....+. . .. ......+++|+++++|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G 247 (302)
T PRK00870 168 SQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFS 247 (302)
T ss_pred cccCchhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEec
Confidence 000000 0 00 0112456899999999
Q ss_pred CCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 197 LCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 197 ~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
++|.++|.+. +.+.+.++... .+++.+++++||.+..+..+.+.+.|.+++.
T Consensus 248 ~~D~~~~~~~-~~~~~~~~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~ 299 (302)
T PRK00870 248 DSDPITGGGD-AILQKRIPGAA--GQPHPTIKGAGHFLQEDSGEELAEAVLEFIR 299 (302)
T ss_pred CCCCcccCch-HHHHhhccccc--ccceeeecCCCccchhhChHHHHHHHHHHHh
Confidence 9999999866 77887776321 2347899999999987766666666655553
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.7e-23 Score=160.59 Aligned_cols=181 Identities=23% Similarity=0.195 Sum_probs=126.5
Q ss_pred eCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025121 27 VRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 27 ~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
|...++..|+|||+||++++...|..+...|. ..|+|+++|+||+|.+.... ..++.+.+
T Consensus 6 y~~~G~g~~~ivllHG~~~~~~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~-------------------~~~~~~~~ 65 (256)
T PRK10349 6 WQTKGQGNVHLVLLHGWGLNAEVWRCIDEELS-SHFTLHLVDLPGFGRSRGFG-------------------ALSLADMA 65 (256)
T ss_pred hhhcCCCCCeEEEECCCCCChhHHHHHHHHHh-cCCEEEEecCCCCCCCCCCC-------------------CCCHHHHH
Confidence 33344445579999999999999999999997 56999999999887542110 12334444
Q ss_pred HHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc-----------------
Q 025121 107 AHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS----------------- 169 (257)
Q Consensus 107 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----------------- 169 (257)
+++.++ .. +++.|+||||||.+++.++.+ +|.++.+++++++.....
T Consensus 66 ~~l~~~----~~-~~~~lvGhS~Gg~ia~~~a~~-----------~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~ 129 (256)
T PRK10349 66 EAVLQQ----AP-DKAIWLGWSLGGLVASQIALT-----------HPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQ 129 (256)
T ss_pred HHHHhc----CC-CCeEEEEECHHHHHHHHHHHh-----------ChHhhheEEEecCccceecCCCCCcccHHHHHHHH
Confidence 554432 22 489999999999999999985 488888888776521100
Q ss_pred --------hhhhhcc-----cc-----------------------------------chHHHhhhcCCCEEEEccCCCCc
Q 025121 170 --------RNLRNKI-----EG-----------------------------------SHEAARRAASLPILLTHGLCDDV 201 (257)
Q Consensus 170 --------~~~~~~~-----~~-----------------------------------~~~~~~~~~~~P~l~~~G~~D~~ 201 (257)
......+ .. ........+++|+++++|+.|.+
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~ 209 (256)
T PRK10349 130 QQLSDDFQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGL 209 (256)
T ss_pred HHHHhchHHHHHHHHHHHHccCchHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCcc
Confidence 0000000 00 00012345689999999999999
Q ss_pred ccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHH
Q 025121 202 VPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTA 248 (257)
Q Consensus 202 v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~ 248 (257)
+|.+.++.+.+.++ +.++++++++||.++.+..+.+.+-+.+
T Consensus 210 ~~~~~~~~~~~~i~-----~~~~~~i~~~gH~~~~e~p~~f~~~l~~ 251 (256)
T PRK10349 210 VPRKVVPMLDKLWP-----HSESYIFAKAAHAPFISHPAEFCHLLVA 251 (256)
T ss_pred CCHHHHHHHHHhCC-----CCeEEEeCCCCCCccccCHHHHHHHHHH
Confidence 99988888888876 6799999999999987776666655554
|
|
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.9e-23 Score=156.62 Aligned_cols=182 Identities=18% Similarity=0.190 Sum_probs=128.6
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
.+|+|||+||++.+...|..+++.|. .+|+|+++|+||+|.+.... ...++.+.++++.++
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~------------------~~~~~~~~~~~~~~~ 72 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLPALT-PDFRVLRYDKRGHGLSDAPE------------------GPYSIEDLADDVLAL 72 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHHHhh-cccEEEEecCCCCCCCCCCC------------------CCCCHHHHHHHHHHH
Confidence 56899999999999999999999986 68999999999876542110 122345556666666
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch--h-------------------
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR--N------------------- 171 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~------------------- 171 (257)
++.... +++.++||||||.+++.++.+. |+.+++++++++...... .
T Consensus 73 i~~~~~-~~v~liG~S~Gg~~a~~~a~~~-----------p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (251)
T TIGR02427 73 LDHLGI-ERAVFCGLSLGGLIAQGLAARR-----------PDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADA 140 (251)
T ss_pred HHHhCC-CceEEEEeCchHHHHHHHHHHC-----------HHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHH
Confidence 665433 3899999999999999999854 667777766653211000 0
Q ss_pred -hhh----ccc-------------------------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhh
Q 025121 172 -LRN----KIE-------------------------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLS 215 (257)
Q Consensus 172 -~~~----~~~-------------------------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~ 215 (257)
... ... .........+++|+++++|++|..+|.+..+.+.+.++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~ 220 (251)
T TIGR02427 141 VLERWFTPGFREAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVP 220 (251)
T ss_pred HHHHHcccccccCChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCC
Confidence 000 000 00011234567999999999999999998888888776
Q ss_pred hcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 216 ISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 216 ~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
+.+++++++++|....+..+.+.+.+.+++
T Consensus 221 -----~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 250 (251)
T TIGR02427 221 -----GARFAEIRGAGHIPCVEQPEAFNAALRDFL 250 (251)
T ss_pred -----CceEEEECCCCCcccccChHHHHHHHHHHh
Confidence 568999999999988777777777666654
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-22 Score=157.65 Aligned_cols=183 Identities=23% Similarity=0.284 Sum_probs=129.4
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
..++|||+||++++...|..+...|+ ++|+|+++|+||+|.+.... ....++...++++.++
T Consensus 27 ~~~~vv~~hG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~-----------------~~~~~~~~~~~~l~~~ 88 (278)
T TIGR03056 27 AGPLLLLLHGTGASTHSWRDLMPPLA-RSFRVVAPDLPGHGFTRAPF-----------------RFRFTLPSMAEDLSAL 88 (278)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHHh-hCcEEEeecCCCCCCCCCcc-----------------ccCCCHHHHHHHHHHH
Confidence 45799999999999999999999997 57999999999887543211 0123455666677777
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch----------------------
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR---------------------- 170 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------------------- 170 (257)
+++... ++++|+||||||.+++.++.+. +.++++++++++......
T Consensus 89 i~~~~~-~~~~lvG~S~Gg~~a~~~a~~~-----------p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (278)
T TIGR03056 89 CAAEGL-SPDGVIGHSAGAAIALRLALDG-----------PVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPP 156 (278)
T ss_pred HHHcCC-CCceEEEECccHHHHHHHHHhC-----------CcccceEEEEcCcccccccccccccchhhHhhhhcccchH
Confidence 765443 3889999999999999999854 667777776654321000
Q ss_pred ----------hhhhcc-------------------ccc-----------------hHHHhhhcCCCEEEEccCCCCcccc
Q 025121 171 ----------NLRNKI-------------------EGS-----------------HEAARRAASLPILLTHGLCDDVVPY 204 (257)
Q Consensus 171 ----------~~~~~~-------------------~~~-----------------~~~~~~~~~~P~l~~~G~~D~~v~~ 204 (257)
...... ... .......+++|+++++|++|.++|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~ 236 (278)
T TIGR03056 157 MMSRGAADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPP 236 (278)
T ss_pred HHHhhcccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCH
Confidence 000000 000 0011234678999999999999999
Q ss_pred hhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 205 KYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 205 ~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
+..+.+.+.++ +++++.++++||.+..+..+.+.+-|.+++
T Consensus 237 ~~~~~~~~~~~-----~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~ 277 (278)
T TIGR03056 237 DESKRAATRVP-----TATLHVVPGGGHLVHEEQADGVVGLILQAA 277 (278)
T ss_pred HHHHHHHHhcc-----CCeEEEECCCCCcccccCHHHHHHHHHHHh
Confidence 88888888776 668999999999988766666666665554
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-22 Score=156.83 Aligned_cols=183 Identities=17% Similarity=0.159 Sum_probs=128.5
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
..+|+|||+||++++...|..++..|+ .+|.|+++|+||+|.+... ...++.+.++++..
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~s~~~-------------------~~~~~~~~~~d~~~ 73 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLGVLARDLV-NDHDIIQVDMRNHGLSPRD-------------------PVMNYPAMAQDLLD 73 (255)
T ss_pred CCCCCEEEECCCCCchhHHHHHHHHHh-hCCeEEEECCCCCCCCCCC-------------------CCCCHHHHHHHHHH
Confidence 456899999999999999999999997 6799999999987654311 01244556666666
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc--h---h---------------
Q 025121 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--R---N--------------- 171 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~---~--------------- 171 (257)
+++..... ++.|+||||||.+++.++.+. ++++++++++++..... . .
T Consensus 74 ~l~~l~~~-~~~lvGhS~Gg~va~~~a~~~-----------~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (255)
T PRK10673 74 TLDALQIE-KATFIGHSMGGKAVMALTALA-----------PDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATT 141 (255)
T ss_pred HHHHcCCC-ceEEEEECHHHHHHHHHHHhC-----------HhhcceEEEEecCCCCccchhhHHHHHHHHHhhhccccc
Confidence 66655433 899999999999999999854 78899988874311000 0 0
Q ss_pred -------hhhcccc-------------------ch----HH-------HhhhcCCCEEEEccCCCCcccchhhHHHHHHh
Q 025121 172 -------LRNKIEG-------------------SH----EA-------ARRAASLPILLTHGLCDDVVPYKYGEKSANCL 214 (257)
Q Consensus 172 -------~~~~~~~-------------------~~----~~-------~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l 214 (257)
+...+.. .. .. ....+++|+++++|++|..++.+..+.+.+.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~ 221 (255)
T PRK10673 142 RQQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQF 221 (255)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhC
Confidence 0000000 00 00 01234689999999999999988888888887
Q ss_pred hhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 215 SISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 215 ~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
+ ++++.+++++||.+..+..+.+.+-+.+++.
T Consensus 222 ~-----~~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~ 253 (255)
T PRK10673 222 P-----QARAHVIAGAGHWVHAEKPDAVLRAIRRYLN 253 (255)
T ss_pred C-----CcEEEEeCCCCCeeeccCHHHHHHHHHHHHh
Confidence 6 6789999999999886555555555554443
|
|
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.5e-22 Score=153.60 Aligned_cols=176 Identities=22% Similarity=0.166 Sum_probs=125.1
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
.+|+|||+||++++...|..+++.|. .+|+|+++|+||+|.+... ...++.+.++.+.+.
T Consensus 3 g~~~iv~~HG~~~~~~~~~~~~~~l~-~~~~vi~~d~~G~G~s~~~-------------------~~~~~~~~~~~~~~~ 62 (245)
T TIGR01738 3 GNVHLVLIHGWGMNAEVFRCLDEELS-AHFTLHLVDLPGHGRSRGF-------------------GPLSLADAAEAIAAQ 62 (245)
T ss_pred CCceEEEEcCCCCchhhHHHHHHhhc-cCeEEEEecCCcCccCCCC-------------------CCcCHHHHHHHHHHh
Confidence 34789999999999999999999997 5799999999987643210 112344555555444
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc--h---------hh---------
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--R---------NL--------- 172 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~---------~~--------- 172 (257)
+. .+++++||||||.+++.++.+. |+++.++|++++..... . ..
T Consensus 63 ~~-----~~~~lvG~S~Gg~~a~~~a~~~-----------p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (245)
T TIGR01738 63 AP-----DPAIWLGWSLGGLVALHIAATH-----------PDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSD 126 (245)
T ss_pred CC-----CCeEEEEEcHHHHHHHHHHHHC-----------HHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhh
Confidence 32 3899999999999999999854 77788888775432100 0 00
Q ss_pred --h----hc-----cc-------------------c----------------chHHHhhhcCCCEEEEccCCCCcccchh
Q 025121 173 --R----NK-----IE-------------------G----------------SHEAARRAASLPILLTHGLCDDVVPYKY 206 (257)
Q Consensus 173 --~----~~-----~~-------------------~----------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~ 206 (257)
. .. .. . ........+++|+++++|++|..+|.+.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~ 206 (245)
T TIGR01738 127 DYQRTIERFLALQTLGTPTARQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKV 206 (245)
T ss_pred hHHHHHHHHHHHHHhcCCccchHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHH
Confidence 0 00 00 0 0001234678999999999999999998
Q ss_pred hHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHh
Q 025121 207 GEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTAR 249 (257)
Q Consensus 207 ~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 249 (257)
.+.+.+.++ ++++++++++||....+..+.+.+-+.++
T Consensus 207 ~~~~~~~~~-----~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 244 (245)
T TIGR01738 207 VPYLDKLAP-----HSELYIFAKAAHAPFLSHAEAFCALLVAF 244 (245)
T ss_pred HHHHHHhCC-----CCeEEEeCCCCCCccccCHHHHHHHHHhh
Confidence 888888876 67899999999999877666666665554
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-21 Score=151.53 Aligned_cols=206 Identities=15% Similarity=0.158 Sum_probs=134.9
Q ss_pred CCCceEEEEEccCCCCccchHHH--h-hcCCCCceEEEccCCCCCCcccCCCCc------ccccccCCCCCCCCCCchhh
Q 025121 31 GKHQATIVWLHGLGDNGSSWSQL--L-ESLPLPNIKWICPTAPTRPVAILGGFP------CTAWFDVGELSDDGPEDWEG 101 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~~~--~-~~l~~~g~~v~~~d~~~~g~~~~~g~~------~~~w~~~~~~~~~~~~~~~~ 101 (257)
..+.|+|+|+||++++...|... . ..++..|+.|++||.+.+|.+...... ..+||...... ........
T Consensus 39 ~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~-~~~~~~~~ 117 (275)
T TIGR02821 39 AGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEE-PWSQHYRM 117 (275)
T ss_pred CCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcC-cccccchH
Confidence 34679999999999998887532 2 333456999999998666554322100 01222110000 00111112
Q ss_pred HHHHHHHHHHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh------hh
Q 025121 102 LDASAAHIANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN------LR 173 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------~~ 173 (257)
....++.+..+++.. ...++++++||||||++++.++.+. |+.+++++++++....... +.
T Consensus 118 ~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~-----------p~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (275)
T TIGR02821 118 YSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKN-----------PDRFKSVSAFAPIVAPSRCPWGQKAFS 186 (275)
T ss_pred HHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhC-----------cccceEEEEECCccCcccCcchHHHHH
Confidence 233345555555542 2335899999999999999999954 8889999998887532210 00
Q ss_pred hcccc--------chHH--HhhhcCCCEEEEccCCCCcccc-hhhHHHHHHhhhcCceeeEEEEecCCCCccC--HHHHH
Q 025121 174 NKIEG--------SHEA--ARRAASLPILLTHGLCDDVVPY-KYGEKSANCLSISGFRHLTFKSFEGLGHYTV--PKEMD 240 (257)
Q Consensus 174 ~~~~~--------~~~~--~~~~~~~P~l~~~G~~D~~v~~-~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~~ 240 (257)
..+.. .... .......|+++.+|+.|..++. .....+.+.+++.++ ++++.++||++|.+. .+.+.
T Consensus 187 ~~l~~~~~~~~~~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~-~v~~~~~~g~~H~f~~~~~~~~ 265 (275)
T TIGR02821 187 AYLGADEAAWRSYDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQ-ALTLRRQAGYDHSYYFIASFIA 265 (275)
T ss_pred HHhcccccchhhcchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHHHHcCC-CeEEEEeCCCCccchhHHHhHH
Confidence 00000 0001 1112467999999999999998 577899999999988 799999999999886 77788
Q ss_pred HHHHHHHHh
Q 025121 241 EVCNWLTAR 249 (257)
Q Consensus 241 ~~~~~l~~~ 249 (257)
..++|..+.
T Consensus 266 ~~~~~~~~~ 274 (275)
T TIGR02821 266 DHLRHHAER 274 (275)
T ss_pred HHHHHHHhh
Confidence 899988765
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=99.90 E-value=4e-22 Score=156.28 Aligned_cols=191 Identities=19% Similarity=0.170 Sum_probs=126.3
Q ss_pred EEeCCCCCCceEEEEEccCCCCccchHHH---hhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhh
Q 025121 25 HVVRPKGKHQATIVWLHGLGDNGSSWSQL---LESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEG 101 (257)
Q Consensus 25 ~~~~~~~~~~~~vi~~HG~~~~~~~~~~~---~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 101 (257)
+.+...++ .++|||+||++++...|..+ +..+...+|+|+++|+||+|.+.... ......
T Consensus 22 ~~y~~~g~-~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~----------------~~~~~~ 84 (282)
T TIGR03343 22 IHYNEAGN-GEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVV----------------MDEQRG 84 (282)
T ss_pred EEEEecCC-CCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCc----------------Cccccc
Confidence 34444443 46899999999888777643 34454578999999999886543210 000001
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCC-------Cc-h---
Q 025121 102 LDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP-------GS-R--- 170 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-------~~-~--- 170 (257)
...++++.++++..... +++++||||||.+++.++.+. |+++++++++++... .. .
T Consensus 85 -~~~~~~l~~~l~~l~~~-~~~lvG~S~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 151 (282)
T TIGR03343 85 -LVNARAVKGLMDALDIE-KAHLVGNSMGGATALNFALEY-----------PDRIGKLILMGPGGLGPSLFAPMPMEGIK 151 (282)
T ss_pred -chhHHHHHHHHHHcCCC-CeeEEEECchHHHHHHHHHhC-----------hHhhceEEEECCCCCCccccccCchHHHH
Confidence 12244555555554333 999999999999999999954 788888887765210 00 0
Q ss_pred hhhh------------c----------------------ccc--------------------chHHHhhhcCCCEEEEcc
Q 025121 171 NLRN------------K----------------------IEG--------------------SHEAARRAASLPILLTHG 196 (257)
Q Consensus 171 ~~~~------------~----------------------~~~--------------------~~~~~~~~~~~P~l~~~G 196 (257)
.... . ... ........+++|+++++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G 231 (282)
T TIGR03343 152 LLFKLYAEPSYETLKQMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWG 231 (282)
T ss_pred HHHHHhcCCCHHHHHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEc
Confidence 0000 0 000 000123457899999999
Q ss_pred CCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 197 LCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 197 ~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
++|.+++.+.++++.+.++ ++++++++++||.+..+..+.+.+.|.+++
T Consensus 232 ~~D~~v~~~~~~~~~~~~~-----~~~~~~i~~agH~~~~e~p~~~~~~i~~fl 280 (282)
T TIGR03343 232 RDDRFVPLDHGLKLLWNMP-----DAQLHVFSRCGHWAQWEHADAFNRLVIDFL 280 (282)
T ss_pred cCCCcCCchhHHHHHHhCC-----CCEEEEeCCCCcCCcccCHHHHHHHHHHHh
Confidence 9999999999999999887 679999999999998766665555555544
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-22 Score=152.77 Aligned_cols=175 Identities=27% Similarity=0.330 Sum_probs=133.3
Q ss_pred EEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhccC
Q 025121 37 IVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTE 116 (257)
Q Consensus 37 vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (257)
|||+||++++...|..+++.|+ +||.|+++|+||+|.+.... .....++.+.+.++.++++..
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~----------------~~~~~~~~~~~~~l~~~l~~~ 63 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPP----------------DYSPYSIEDYAEDLAELLDAL 63 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHS----------------SGSGGSHHHHHHHHHHHHHHT
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCcccccccc----------------ccCCcchhhhhhhhhhccccc
Confidence 7999999999999999999995 89999999999876433211 012445677777888888776
Q ss_pred CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhh---------hhcc-----------
Q 025121 117 PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL---------RNKI----------- 176 (257)
Q Consensus 117 ~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---------~~~~----------- 176 (257)
... +++++|||+||.+++.++.+. |+++++++++++........ ....
T Consensus 64 ~~~-~~~lvG~S~Gg~~a~~~a~~~-----------p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (228)
T PF12697_consen 64 GIK-KVILVGHSMGGMIALRLAARY-----------PDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLA 131 (228)
T ss_dssp TTS-SEEEEEETHHHHHHHHHHHHS-----------GGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccc-ccccccccccccccccccccc-----------ccccccceeecccccccccccccccchhhhhhhhcccccccccc
Confidence 554 999999999999999999854 88999999998877422110 0000
Q ss_pred -----------------c----------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeE
Q 025121 177 -----------------E----------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLT 223 (257)
Q Consensus 177 -----------------~----------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~ 223 (257)
. .........+++|+++++|++|.+++.+..+.+.+.++ +++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~-----~~~ 206 (228)
T PF12697_consen 132 SRFFYRWFDGDEPEDLIRSSRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLP-----NAE 206 (228)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHST-----TEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCC-----CCE
Confidence 0 00011334568999999999999999888888888876 679
Q ss_pred EEEecCCCCccCHHHHHHHHHH
Q 025121 224 FKSFEGLGHYTVPKEMDEVCNW 245 (257)
Q Consensus 224 ~~~~~g~~H~~~~~~~~~~~~~ 245 (257)
+++++++||.+..+..+.+.+|
T Consensus 207 ~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 207 LVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp EEEETTSSSTHHHHSHHHHHHH
T ss_pred EEEECCCCCccHHHCHHHHhcC
Confidence 9999999999998888887765
|
... |
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.6e-22 Score=156.88 Aligned_cols=181 Identities=15% Similarity=0.127 Sum_probs=123.4
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.++|||+||++++...|..+++.|++. ++|+++|+||+|.+.... ...++.+.++++.+++
T Consensus 27 g~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~------------------~~~~~~~~a~dl~~ll 87 (295)
T PRK03592 27 GDPIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPD------------------IDYTFADHARYLDAWF 87 (295)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCC------------------CCCCHHHHHHHHHHHH
Confidence 468999999999999999999999865 599999999876543221 1134566677777777
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCC------ch-------hhh-------
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPG------SR-------NLR------- 173 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~-------~~~------- 173 (257)
+..... +++|+||||||.+++.++.+. |+++++++++++.... .. .+.
T Consensus 88 ~~l~~~-~~~lvGhS~Gg~ia~~~a~~~-----------p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (295)
T PRK03592 88 DALGLD-DVVLVGHDWGSALGFDWAARH-----------PDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEE 155 (295)
T ss_pred HHhCCC-CeEEEEECHHHHHHHHHHHhC-----------hhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccc
Confidence 765444 999999999999999999964 8888888887753210 00 000
Q ss_pred ---------h-cccc-------------------ch-----------------------------HHHhhhcCCCEEEEc
Q 025121 174 ---------N-KIEG-------------------SH-----------------------------EAARRAASLPILLTH 195 (257)
Q Consensus 174 ---------~-~~~~-------------------~~-----------------------------~~~~~~~~~P~l~~~ 195 (257)
. .... .. ......+++|+++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 235 (295)
T PRK03592 156 MVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLIN 235 (295)
T ss_pred cccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEe
Confidence 0 0000 00 001133689999999
Q ss_pred cCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHh
Q 025121 196 GLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTAR 249 (257)
Q Consensus 196 G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 249 (257)
|++|..++.....++...+.. +.++++++++||.++.+..+.+.+-|.++
T Consensus 236 G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~p~~v~~~i~~f 285 (295)
T PRK03592 236 AEPGAILTTGAIRDWCRSWPN----QLEITVFGAGLHFAQEDSPEEIGAAIAAW 285 (295)
T ss_pred ccCCcccCcHHHHHHHHHhhh----hcceeeccCcchhhhhcCHHHHHHHHHHH
Confidence 999999965555555444321 56899999999999855544444444333
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.2e-22 Score=143.67 Aligned_cols=181 Identities=17% Similarity=0.167 Sum_probs=127.0
Q ss_pred eEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhc
Q 025121 35 ATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLS 114 (257)
Q Consensus 35 ~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (257)
.+||++||+.++..+.+.+++.|.++||.|.+|.+||||..... | ......++-..+.+..+.+.
T Consensus 16 ~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~-------f--------l~t~~~DW~~~v~d~Y~~L~ 80 (243)
T COG1647 16 RAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPED-------F--------LKTTPRDWWEDVEDGYRDLK 80 (243)
T ss_pred EEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHH-------H--------hcCCHHHHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999999998754311 0 00012222222222223333
Q ss_pred cCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch------------------------
Q 025121 115 TEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR------------------------ 170 (257)
Q Consensus 115 ~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------------------------ 170 (257)
...- +.|+++|.||||.+++.++.+ +| +++++.+|+......
T Consensus 81 ~~gy-~eI~v~GlSmGGv~alkla~~-----------~p--~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e 146 (243)
T COG1647 81 EAGY-DEIAVVGLSMGGVFALKLAYH-----------YP--PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQE 146 (243)
T ss_pred HcCC-CeEEEEeecchhHHHHHHHhh-----------CC--ccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHH
Confidence 2222 389999999999999999984 24 788888776532110
Q ss_pred hhhhcc---c--------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCc
Q 025121 171 NLRNKI---E--------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHY 233 (257)
Q Consensus 171 ~~~~~~---~--------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~ 233 (257)
.+.+.+ . .........+..|+++++|.+|+.+|.+.+..+++.+... +.++.++++.||.
T Consensus 147 ~~~~e~~~~~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~---~KeL~~~e~SgHV 223 (243)
T COG1647 147 QIDKEMKSYKDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESD---DKELKWLEGSGHV 223 (243)
T ss_pred HHHHHHHHhhcchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCC---cceeEEEccCCce
Confidence 000000 0 0011144668899999999999999999999999999865 6799999999998
Q ss_pred cCHH-----HHHHHHHHHH
Q 025121 234 TVPK-----EMDEVCNWLT 247 (257)
Q Consensus 234 ~~~~-----~~~~~~~~l~ 247 (257)
+..+ ..+.+..||+
T Consensus 224 It~D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 224 ITLDKERDQVEEDVITFLE 242 (243)
T ss_pred eecchhHHHHHHHHHHHhh
Confidence 7632 3466777765
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-21 Score=158.24 Aligned_cols=187 Identities=20% Similarity=0.154 Sum_probs=123.6
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.|+|||+||++++...|..++..|+ .+|+|+++|+||+|.+.... ....++...++++.+++
T Consensus 88 gp~lvllHG~~~~~~~w~~~~~~L~-~~~~via~Dl~G~G~S~~~~-----------------~~~~~~~~~a~~l~~~l 149 (360)
T PLN02679 88 GPPVLLVHGFGASIPHWRRNIGVLA-KNYTVYAIDLLGFGASDKPP-----------------GFSYTMETWAELILDFL 149 (360)
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHh-cCCEEEEECCCCCCCCCCCC-----------------CccccHHHHHHHHHHHH
Confidence 4789999999999999999999997 58999999999876542210 01234456666777777
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc------h-h---------------
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS------R-N--------------- 171 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~-~--------------- 171 (257)
+..... +++|+||||||.+++.++.+ .+|++++++|++++..... . .
T Consensus 150 ~~l~~~-~~~lvGhS~Gg~ia~~~a~~----------~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (360)
T PLN02679 150 EEVVQK-PTVLIGNSVGSLACVIAASE----------STRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLL 218 (360)
T ss_pred HHhcCC-CeEEEEECHHHHHHHHHHHh----------cChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHh
Confidence 655444 99999999999999988863 1377888888776431100 0 0
Q ss_pred --------hhhc------c--------cc-----------------------------------chHHHhhhcCCCEEEE
Q 025121 172 --------LRNK------I--------EG-----------------------------------SHEAARRAASLPILLT 194 (257)
Q Consensus 172 --------~~~~------~--------~~-----------------------------------~~~~~~~~~~~P~l~~ 194 (257)
+... + .. ........+++|+|++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii 298 (360)
T PLN02679 219 KQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVL 298 (360)
T ss_pred hchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEE
Confidence 0000 0 00 0001223468999999
Q ss_pred ccCCCCcccchhh-HHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 195 HGLCDDVVPYKYG-EKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 195 ~G~~D~~v~~~~~-~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
+|++|.++|.+.. .+..+.+.+. .++.++++++++||.++.|..+.+.+.|.+++
T Consensus 299 ~G~~D~~~p~~~~~~~~~~~l~~~-ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL 354 (360)
T PLN02679 299 WGDQDPFTPLDGPVGKYFSSLPSQ-LPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWL 354 (360)
T ss_pred EeCCCCCcCchhhHHHHHHhhhcc-CCceEEEEcCCCCCCccccCHHHHHHHHHHHH
Confidence 9999999998642 2223333221 12679999999999988666555554444444
|
|
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.2e-22 Score=149.18 Aligned_cols=197 Identities=19% Similarity=0.232 Sum_probs=123.4
Q ss_pred EeCCCC-CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCc-ccCC-CCcccccccCCCCCCCCCCchhhH
Q 025121 26 VVRPKG-KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPV-AILG-GFPCTAWFDVGELSDDGPEDWEGL 102 (257)
Q Consensus 26 ~~~~~~-~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~-~~~~-g~~~~~w~~~~~~~~~~~~~~~~~ 102 (257)
+..|.+ .+.|.||++|++.+-....+.+++.|+..||.|++||+-.... .... ......+... .....+..
T Consensus 5 ~~~P~~~~~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 78 (218)
T PF01738_consen 5 VARPEGGGPRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMREL------FAPRPEQV 78 (218)
T ss_dssp EEEETTSSSEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHC------HHHSHHHH
T ss_pred EEeCCCCCCCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHH------HhhhHHHH
Confidence 333443 4889999999998887778889999999999999999642211 0000 0000000000 00001223
Q ss_pred HHHHHHHHHHhccCC--CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccch
Q 025121 103 DASAAHIANLLSTEP--ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSH 180 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 180 (257)
...+....++++... ...+|+++|+|+||.+++.++.+ .+.+++++.+.|..... ..
T Consensus 79 ~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~------------~~~~~a~v~~yg~~~~~---------~~ 137 (218)
T PF01738_consen 79 AADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAAR------------DPRVDAAVSFYGGSPPP---------PP 137 (218)
T ss_dssp HHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCC------------TTTSSEEEEES-SSSGG---------GH
T ss_pred HHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhh------------ccccceEEEEcCCCCCC---------cc
Confidence 333334455555544 33699999999999999999873 35789999888711111 12
Q ss_pred HHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC------------HHHHHHHHHHHHH
Q 025121 181 EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV------------PKEMDEVCNWLTA 248 (257)
Q Consensus 181 ~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~------------~~~~~~~~~~l~~ 248 (257)
......+++|+++++|++|+.++.+..+.+.+.+++.+. ++++++|||++|.+. .+.++++++||++
T Consensus 138 ~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~-~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~ 216 (218)
T PF01738_consen 138 LEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGV-DVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKR 216 (218)
T ss_dssp HHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTT-TEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC
T ss_pred hhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCC-cEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHh
Confidence 223456789999999999999999999999999988887 899999999999886 2357888888877
Q ss_pred hc
Q 025121 249 RL 250 (257)
Q Consensus 249 ~l 250 (257)
.|
T Consensus 217 ~L 218 (218)
T PF01738_consen 217 HL 218 (218)
T ss_dssp --
T ss_pred cC
Confidence 54
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-21 Score=151.35 Aligned_cols=186 Identities=15% Similarity=0.132 Sum_probs=132.5
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
+.+|+|||+||++.+...|..+...|.+.||+|+++|+|++|.+... .....++.+.++.+.+
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~-----------------~~~~~~~~~~~~~l~~ 78 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSD-----------------ADSVTTFDEYNKPLID 78 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCC-----------------cccCCCHHHHHHHHHH
Confidence 34679999999999999999999999878999999999987532110 1112455666777777
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch--h----------hh------
Q 025121 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR--N----------LR------ 173 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~----------~~------ 173 (257)
+++.....++++|+||||||.++..++.+. +++++++|.++++.+... . +.
T Consensus 79 ~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~-----------p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 147 (273)
T PLN02211 79 FLSSLPENEKVILVGHSAGGLSVTQAIHRF-----------PKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVY 147 (273)
T ss_pred HHHhcCCCCCEEEEEECchHHHHHHHHHhC-----------hhheeEEEEeccccCCCCCCHHHHHhccccchhhhccce
Confidence 777654335999999999999999999853 677778777755432100 0 00
Q ss_pred -------------hc-c----------ccchH----------------------H--Hhhhc-CCCEEEEccCCCCcccc
Q 025121 174 -------------NK-I----------EGSHE----------------------A--ARRAA-SLPILLTHGLCDDVVPY 204 (257)
Q Consensus 174 -------------~~-~----------~~~~~----------------------~--~~~~~-~~P~l~~~G~~D~~v~~ 204 (257)
.. . ...+. . ..... ++|+++|.|++|..+|+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~ 227 (273)
T PLN02211 148 ELGFGLGPDQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKP 227 (273)
T ss_pred eeeeccCCCCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCH
Confidence 00 0 00000 0 00112 67999999999999999
Q ss_pred hhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 205 KYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 205 ~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
+..+.+.+.++ ..+++.++ +||..+.+..+.+.+.|.+..+
T Consensus 228 ~~~~~m~~~~~-----~~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~ 268 (273)
T PLN02211 228 EQQEAMIKRWP-----PSQVYELE-SDHSPFFSTPFLLFGLLIKAAA 268 (273)
T ss_pred HHHHHHHHhCC-----ccEEEEEC-CCCCccccCHHHHHHHHHHHHH
Confidence 99999998886 44788887 7999998888888888877543
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-21 Score=167.14 Aligned_cols=195 Identities=23% Similarity=0.271 Sum_probs=135.6
Q ss_pred ceEEEEEccCCCCccc--hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 34 QATIVWLHGLGDNGSS--WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
.|+||++||....... |....+.|+..||.|+.++.||. .|++. . |......+.. ...+.+..+.+.
T Consensus 394 yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS-----~GyG~-~-F~~~~~~~~g---~~~~~D~~~~~~- 462 (620)
T COG1506 394 YPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGS-----TGYGR-E-FADAIRGDWG---GVDLEDLIAAVD- 462 (620)
T ss_pred CCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCC-----CccHH-H-HHHhhhhccC---CccHHHHHHHHH-
Confidence 4999999998654443 56677888889999999998742 22211 1 1111111111 223344444444
Q ss_pred HhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc--------------hh----
Q 025121 112 LLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--------------RN---- 171 (257)
Q Consensus 112 ~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------------~~---- 171 (257)
++.+. .+.+|++++|+|+||++++.++.+. + .+++.++..+..... +.
T Consensus 463 ~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~-----------~-~f~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (620)
T COG1506 463 ALVKLPLVDPERIGITGGSYGGYMTLLAATKT-----------P-RFKAAVAVAGGVDWLLYFGESTEGLRFDPEENGGG 530 (620)
T ss_pred HHHhCCCcChHHeEEeccChHHHHHHHHHhcC-----------c-hhheEEeccCcchhhhhccccchhhcCCHHHhCCC
Confidence 44333 3336999999999999999999852 4 677766655421100 00
Q ss_pred ----hhhccccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCH-----HHHHHH
Q 025121 172 ----LRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVP-----KEMDEV 242 (257)
Q Consensus 172 ----~~~~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~-----~~~~~~ 242 (257)
........+.....++++|+|+|||++|..||.+++.++++.|+..|+ ++++++||+.+|.+.. +.++++
T Consensus 531 ~~~~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~-~~~~~~~p~e~H~~~~~~~~~~~~~~~ 609 (620)
T COG1506 531 PPEDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGK-PVELVVFPDEGHGFSRPENRVKVLKEI 609 (620)
T ss_pred cccChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCc-eEEEEEeCCCCcCCCCchhHHHHHHHH
Confidence 011223344556788899999999999999999999999999999888 8999999999999873 357899
Q ss_pred HHHHHHhcCc
Q 025121 243 CNWLTARLGL 252 (257)
Q Consensus 243 ~~~l~~~l~~ 252 (257)
++|+.+.++.
T Consensus 610 ~~~~~~~~~~ 619 (620)
T COG1506 610 LDWFKRHLKQ 619 (620)
T ss_pred HHHHHHHhcC
Confidence 9999988764
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.3e-21 Score=156.31 Aligned_cols=180 Identities=18% Similarity=0.092 Sum_probs=125.3
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.++|||+||++++...|..++..|+ .+|.|+++|+||+|.+... ....+.....+++.+++
T Consensus 86 g~~vvliHG~~~~~~~w~~~~~~l~-~~~~v~~~D~~G~G~S~~~------------------~~~~~~~~~a~~l~~~i 146 (354)
T PLN02578 86 GLPIVLIHGFGASAFHWRYNIPELA-KKYKVYALDLLGFGWSDKA------------------LIEYDAMVWRDQVADFV 146 (354)
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHh-cCCEEEEECCCCCCCCCCc------------------ccccCHHHHHHHHHHHH
Confidence 3679999999999999999999997 5799999999987643221 01123344455666666
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc--------------hhhh------
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--------------RNLR------ 173 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------------~~~~------ 173 (257)
+..... +++++|||+||.+++.++.+. |+++++++++++..... ....
T Consensus 147 ~~~~~~-~~~lvG~S~Gg~ia~~~A~~~-----------p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (354)
T PLN02578 147 KEVVKE-PAVLVGNSLGGFTALSTAVGY-----------PELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKP 214 (354)
T ss_pred HHhccC-CeEEEEECHHHHHHHHHHHhC-----------hHhcceEEEECCCccccccccccccccccccchhhHHHhHH
Confidence 554433 899999999999999999954 78888888765421000 0000
Q ss_pred ------h----------------------ccc---------------------------------------cchHHHhhh
Q 025121 174 ------N----------------------KIE---------------------------------------GSHEAARRA 186 (257)
Q Consensus 174 ------~----------------------~~~---------------------------------------~~~~~~~~~ 186 (257)
. .+. .........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 294 (354)
T PLN02578 215 LKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSK 294 (354)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhc
Confidence 0 000 000012244
Q ss_pred cCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 187 ASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 187 ~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
+++|+++++|++|.+++.+.++.+.+.++ +.++++++ +||..+.+..+.+.+-|.+++
T Consensus 295 i~~PvLiI~G~~D~~v~~~~~~~l~~~~p-----~a~l~~i~-~GH~~~~e~p~~~~~~I~~fl 352 (354)
T PLN02578 295 LSCPLLLLWGDLDPWVGPAKAEKIKAFYP-----DTTLVNLQ-AGHCPHDEVPEQVNKALLEWL 352 (354)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHhCC-----CCEEEEeC-CCCCccccCHHHHHHHHHHHH
Confidence 68999999999999999999888888886 56788885 799998776666666665554
|
|
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.7e-21 Score=157.85 Aligned_cols=197 Identities=17% Similarity=0.112 Sum_probs=131.7
Q ss_pred CCCceEEeCCCCCCceEEEEEccCCCCc-cchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCc
Q 025121 20 EFGRTHVVRPKGKHQATIVWLHGLGDNG-SSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPED 98 (257)
Q Consensus 20 ~~~~~~~~~~~~~~~~~vi~~HG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~ 98 (257)
.+...+..+..+++.|+||+.||+++.. ..|..+++.|+..||.|+++|+||+|.+.... .
T Consensus 180 ~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~---------------~--- 241 (414)
T PRK05077 180 PITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWK---------------L--- 241 (414)
T ss_pred EEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC---------------c---
Confidence 3444444444456778888888887765 45777888888899999999999876542100 0
Q ss_pred hhhHHHHHHHHHHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc-------
Q 025121 99 WEGLDASAAHIANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS------- 169 (257)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------- 169 (257)
..+.......+.+++... .+..+|+++|||+||++++.++... +++++++|++++.....
T Consensus 242 ~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~-----------p~ri~a~V~~~~~~~~~~~~~~~~ 310 (414)
T PRK05077 242 TQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLE-----------PPRLKAVACLGPVVHTLLTDPKRQ 310 (414)
T ss_pred cccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhC-----------CcCceEEEEECCccchhhcchhhh
Confidence 011122234455555443 2345999999999999999999853 77899999988764210
Q ss_pred ----h----hhhhcccc--ch---------------H-HHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeE
Q 025121 170 ----R----NLRNKIEG--SH---------------E-AARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLT 223 (257)
Q Consensus 170 ----~----~~~~~~~~--~~---------------~-~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~ 223 (257)
. .+...+.. .. . .....+++|+|+++|++|.++|.+.++.+.+..+ +.+
T Consensus 311 ~~~p~~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~-----~~~ 385 (414)
T PRK05077 311 QQVPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSA-----DGK 385 (414)
T ss_pred hhchHHHHHHHHHHhCCCCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCC-----CCe
Confidence 0 00000000 00 0 0113578999999999999999999998887775 668
Q ss_pred EEEecCCCCccC-HHHHHHHHHHHHHhc
Q 025121 224 FKSFEGLGHYTV-PKEMDEVCNWLTARL 250 (257)
Q Consensus 224 ~~~~~g~~H~~~-~~~~~~~~~~l~~~l 250 (257)
++++|+..|.-. .+..+.+.+||.+.|
T Consensus 386 l~~i~~~~~~e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 386 LLEIPFKPVYRNFDKALQEISDWLEDRL 413 (414)
T ss_pred EEEccCCCccCCHHHHHHHHHHHHHHHh
Confidence 999998532222 556788999998765
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.9e-21 Score=148.04 Aligned_cols=173 Identities=19% Similarity=0.245 Sum_probs=118.6
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.|+|||+||++++...|..++..|. +|+|+++|+||+|.+.... ..++.+.++++.+++
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~--~~~vi~~D~~G~G~S~~~~-------------------~~~~~~~~~~l~~~l 60 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP--DYPRLYIDLPGHGGSAAIS-------------------VDGFADVSRLLSQTL 60 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC--CCCEEEecCCCCCCCCCcc-------------------ccCHHHHHHHHHHHH
Confidence 4689999999999999999999884 6999999999876432110 124567777777888
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCccc-ccceEEEeccCCCCchh------------h--------
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYV-NLRAVVGLSGWLPGSRN------------L-------- 172 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~------------~-------- 172 (257)
+.... ++++++||||||.+++.++.+. ++ ++++++++++....... .
T Consensus 61 ~~~~~-~~~~lvG~S~Gg~va~~~a~~~-----------~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (242)
T PRK11126 61 QSYNI-LPYWLVGYSLGGRIAMYYACQG-----------LAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEP 128 (242)
T ss_pred HHcCC-CCeEEEEECHHHHHHHHHHHhC-----------CcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCc
Confidence 76544 4999999999999999999964 44 38888776543211000 0
Q ss_pred -----hhc--------ccc-------------------------------chHHHhhhcCCCEEEEccCCCCcccchhhH
Q 025121 173 -----RNK--------IEG-------------------------------SHEAARRAASLPILLTHGLCDDVVPYKYGE 208 (257)
Q Consensus 173 -----~~~--------~~~-------------------------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~ 208 (257)
... ... ........+++|+++++|++|..+.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~----- 203 (242)
T PRK11126 129 LEQVLADWYQQPVFASLNAEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ----- 203 (242)
T ss_pred HHHHHHHHHhcchhhccCccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----
Confidence 000 000 0001223568999999999998642
Q ss_pred HHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 209 KSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 209 ~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
.+.+.. +.++++++++||.++.+..+.+.+.|.+++
T Consensus 204 ~~~~~~------~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 239 (242)
T PRK11126 204 ALAQQL------ALPLHVIPNAGHNAHRENPAAFAASLAQIL 239 (242)
T ss_pred HHHHHh------cCeEEEeCCCCCchhhhChHHHHHHHHHHH
Confidence 222221 568999999999998776666666665554
|
|
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3e-21 Score=151.27 Aligned_cols=190 Identities=14% Similarity=0.112 Sum_probs=129.1
Q ss_pred EEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025121 25 HVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 25 ~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
+.+...+. .++|||+||++.+...|..+...|. .+|+|+++|+||+|.+..... ....+.+
T Consensus 26 i~y~~~G~-~~~iv~lHG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~-----------------~~~~~~~ 86 (286)
T PRK03204 26 IHYIDEGT-GPPILLCHGNPTWSFLYRDIIVALR-DRFRCVAPDYLGFGLSERPSG-----------------FGYQIDE 86 (286)
T ss_pred EEEEECCC-CCEEEEECCCCccHHHHHHHHHHHh-CCcEEEEECCCCCCCCCCCCc-----------------cccCHHH
Confidence 33433443 4789999999988888999999997 569999999998765432110 0123455
Q ss_pred HHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc---------------
Q 025121 105 SAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--------------- 169 (257)
Q Consensus 105 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------------- 169 (257)
.+..+.+++++... ++++++||||||.+++.++... |++++++|++++.....
T Consensus 87 ~~~~~~~~~~~~~~-~~~~lvG~S~Gg~va~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 154 (286)
T PRK03204 87 HARVIGEFVDHLGL-DRYLSMGQDWGGPISMAVAVER-----------ADRVRGVVLGNTWFWPADTLAMKAFSRVMSSP 154 (286)
T ss_pred HHHHHHHHHHHhCC-CCEEEEEECccHHHHHHHHHhC-----------hhheeEEEEECccccCCCchhHHHHHHHhccc
Confidence 55566666655433 3899999999999999999854 77888887765432100
Q ss_pred ---hh------hhhc-c-----ccch------------------------H----H--H-h--------hhcCCCEEEEc
Q 025121 170 ---RN------LRNK-I-----EGSH------------------------E----A--A-R--------RAASLPILLTH 195 (257)
Q Consensus 170 ---~~------~~~~-~-----~~~~------------------------~----~--~-~--------~~~~~P~l~~~ 195 (257)
.. +... + .... . . . . ...++|+++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~ 234 (286)
T PRK03204 155 PVQYAILRRNFFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVW 234 (286)
T ss_pred cchhhhhhhhHHHHHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEe
Confidence 00 0000 0 0000 0 0 0 0 01279999999
Q ss_pred cCCCCcccch-hhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 196 GLCDDVVPYK-YGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 196 G~~D~~v~~~-~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
|++|.++++. ..+.+.+.++ +.++++++++||.++.+..+.+.+.|.+++
T Consensus 235 G~~D~~~~~~~~~~~~~~~ip-----~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 235 GMKDVAFRPKTILPRLRATFP-----DHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred cCCCcccCcHHHHHHHHHhcC-----CCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 9999988655 4577777777 679999999999999888888877777665
|
|
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.5e-21 Score=147.73 Aligned_cols=207 Identities=15% Similarity=0.146 Sum_probs=128.6
Q ss_pred CCCceEEEEEccCCCCccchHH---HhhcCCCCceEEEccCCCCCCcccCCCCc------ccccccCCCCCCCCCCch-h
Q 025121 31 GKHQATIVWLHGLGDNGSSWSQ---LLESLPLPNIKWICPTAPTRPVAILGGFP------CTAWFDVGELSDDGPEDW-E 100 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~~---~~~~l~~~g~~v~~~d~~~~g~~~~~g~~------~~~w~~~~~~~~~~~~~~-~ 100 (257)
+.+.|+|+|+||++++...|.. +.+.++..|+.|+.||..++|........ ..++|............. .
T Consensus 44 ~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (283)
T PLN02442 44 SGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYD 123 (283)
T ss_pred CCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhh
Confidence 3467999999999988877644 33556667999999998876633221110 001111000000000010 1
Q ss_pred -hHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh------hh
Q 025121 101 -GLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN------LR 173 (257)
Q Consensus 101 -~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------~~ 173 (257)
...+....+...+... +.++++|+|+||||++++.++.++ |+.+++++++++....... +.
T Consensus 124 ~~~~~l~~~i~~~~~~~-~~~~~~i~G~S~GG~~a~~~a~~~-----------p~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (283)
T PLN02442 124 YVVKELPKLLSDNFDQL-DTSRASIFGHSMGGHGALTIYLKN-----------PDKYKSVSAFAPIANPINCPWGQKAFT 191 (283)
T ss_pred hHHHHHHHHHHHHHHhc-CCCceEEEEEChhHHHHHHHHHhC-----------chhEEEEEEECCccCcccCchhhHHHH
Confidence 1222233333333322 335899999999999999999954 8899999999887542210 11
Q ss_pred hccccc-----------hHHHhhhcCCCEEEEccCCCCcccch-hhHHHHHHhhhcCceeeEEEEecCCCCccC--HHHH
Q 025121 174 NKIEGS-----------HEAARRAASLPILLTHGLCDDVVPYK-YGEKSANCLSISGFRHLTFKSFEGLGHYTV--PKEM 239 (257)
Q Consensus 174 ~~~~~~-----------~~~~~~~~~~P~l~~~G~~D~~v~~~-~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~ 239 (257)
..+... ........++|+++++|++|.+++.. .++.+.+.+++.+. +++++++||.+|.+. ...+
T Consensus 192 ~~~g~~~~~~~~~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~-~~~~~~~pg~~H~~~~~~~~i 270 (283)
T PLN02442 192 NYLGSDKADWEEYDATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGA-PVTLRLQPGYDHSYFFIATFI 270 (283)
T ss_pred HHcCCChhhHHHcChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCC-CeEEEEeCCCCccHHHHHHHH
Confidence 111000 00112235789999999999999974 47889999999887 799999999999866 3344
Q ss_pred HHHHHHHHHhc
Q 025121 240 DEVCNWLTARL 250 (257)
Q Consensus 240 ~~~~~~l~~~l 250 (257)
++.++|..+.+
T Consensus 271 ~~~~~~~~~~~ 281 (283)
T PLN02442 271 DDHINHHAQAL 281 (283)
T ss_pred HHHHHHHHHHh
Confidence 55555555544
|
|
| >KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.2e-21 Score=151.38 Aligned_cols=186 Identities=20% Similarity=0.272 Sum_probs=133.4
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCC-ceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLPLP-NIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
..+++||++||++++...|+.+...|... |+.|+++|.+|+|.+. ........++.+....+.
T Consensus 56 ~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s----------------~~~~~~~y~~~~~v~~i~ 119 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSS----------------PLPRGPLYTLRELVELIR 119 (326)
T ss_pred CCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCC----------------CCCCCCceehhHHHHHHH
Confidence 46889999999999999999999999854 5999999999865311 111222366677777887
Q ss_pred HHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEE---EeccCCCCch-----------------
Q 025121 111 NLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVV---GLSGWLPGSR----------------- 170 (257)
Q Consensus 111 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i---~~~~~~~~~~----------------- 170 (257)
.+....... ++.++|||+||.+|+.+|+. +|+.++.++ .+.+.....+
T Consensus 120 ~~~~~~~~~-~~~lvghS~Gg~va~~~Aa~-----------~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (326)
T KOG1454|consen 120 RFVKEVFVE-PVSLVGHSLGGIVALKAAAY-----------YPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSAL 187 (326)
T ss_pred HHHHhhcCc-ceEEEEeCcHHHHHHHHHHh-----------CcccccceeeecccccccccCCcchhHHHHhhhhhccHh
Confidence 777766555 79999999999999999995 488888888 4433210000
Q ss_pred -----------------------------------hhhhc---------------------cc--cchHHHhhhcC-CCE
Q 025121 171 -----------------------------------NLRNK---------------------IE--GSHEAARRAAS-LPI 191 (257)
Q Consensus 171 -----------------------------------~~~~~---------------------~~--~~~~~~~~~~~-~P~ 191 (257)
..... .. .........+. +|+
T Consensus 188 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pv 267 (326)
T KOG1454|consen 188 ELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPV 267 (326)
T ss_pred hhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCce
Confidence 00000 00 11111233444 999
Q ss_pred EEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 192 LLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 192 l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
++++|+.|+++|.+.+..+.++++ ++++++++++||..+.+..+.+.+.|..++
T Consensus 268 lii~G~~D~~~p~~~~~~~~~~~p-----n~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi 321 (326)
T KOG1454|consen 268 LIIWGDKDQIVPLELAEELKKKLP-----NAELVEIPGAGHLPHLERPEEVAALLRSFI 321 (326)
T ss_pred EEEEcCcCCccCHHHHHHHHhhCC-----CceEEEeCCCCcccccCCHHHHHHHHHHHH
Confidence 999999999999998888888884 789999999999998666655555555544
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.4e-21 Score=157.57 Aligned_cols=186 Identities=13% Similarity=0.134 Sum_probs=125.4
Q ss_pred CCceEEEEEccCCCCccchHH-HhhcCC---CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQ-LLESLP---LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~-~~~~l~---~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
+.+++|||+||++++...|.. ++..|. ..+|+|+++|+||+|.+.... ....++.+.++
T Consensus 199 ~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~-----------------~~~ytl~~~a~ 261 (481)
T PLN03087 199 KAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPA-----------------DSLYTLREHLE 261 (481)
T ss_pred CCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCC-----------------CCcCCHHHHHH
Confidence 345799999999999988874 434443 368999999999876543211 01233455555
Q ss_pred HHH-HHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCC-Cch---------------
Q 025121 108 HIA-NLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP-GSR--------------- 170 (257)
Q Consensus 108 ~~~-~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~--------------- 170 (257)
++. .+++.... +++.++||||||.+++.++.++ |+++++++++++... ...
T Consensus 262 ~l~~~ll~~lg~-~k~~LVGhSmGG~iAl~~A~~~-----------Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~ 329 (481)
T PLN03087 262 MIERSVLERYKV-KSFHIVAHSLGCILALALAVKH-----------PGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPR 329 (481)
T ss_pred HHHHHHHHHcCC-CCEEEEEECHHHHHHHHHHHhC-----------hHhccEEEEECCCccccccchhHHHHHHHHhccc
Confidence 553 45554433 3899999999999999999954 778888888764210 000
Q ss_pred -------------hhh----h--------------c---------ccc-----------chH------------------
Q 025121 171 -------------NLR----N--------------K---------IEG-----------SHE------------------ 181 (257)
Q Consensus 171 -------------~~~----~--------------~---------~~~-----------~~~------------------ 181 (257)
.+. . . ... ...
T Consensus 330 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~ 409 (481)
T PLN03087 330 RVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGY 409 (481)
T ss_pred ccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhH
Confidence 000 0 0 000 000
Q ss_pred --HHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCH-HHHHHHHHHHHHhcC
Q 025121 182 --AARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVP-KEMDEVCNWLTARLG 251 (257)
Q Consensus 182 --~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~-~~~~~~~~~l~~~l~ 251 (257)
.....+++|+|+++|++|.++|++.++.+.+.++ +.++++++++||.... +..+.+.+.|.++..
T Consensus 410 l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP-----~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~ 477 (481)
T PLN03087 410 LDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVP-----RARVKVIDDKDHITIVVGRQKEFARELEEIWR 477 (481)
T ss_pred HHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCC-----CCEEEEeCCCCCcchhhcCHHHHHHHHHHHhh
Confidence 0001468999999999999999999999999987 6799999999999663 555555555555543
|
|
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.5e-21 Score=146.48 Aligned_cols=181 Identities=22% Similarity=0.282 Sum_probs=122.4
Q ss_pred eEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH-HHHHh
Q 025121 35 ATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH-IANLL 113 (257)
Q Consensus 35 ~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 113 (257)
|+||++||++++...|..+++.|+ .+|.|+++|.|++|.+.... .....++.+.+.+ +..++
T Consensus 2 ~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~----------------~~~~~~~~~~~~~~~~~~~ 64 (251)
T TIGR03695 2 PVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPD----------------EIERYDFEEAAQDILATLL 64 (251)
T ss_pred CEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCC----------------ccChhhHHHHHHHHHHHHH
Confidence 689999999999999999999998 89999999999876442211 1123345555555 44444
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh----------------------
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN---------------------- 171 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---------------------- 171 (257)
+... ..+++++|||+||.+++.++.+. +..+.+++++++.......
T Consensus 65 ~~~~-~~~~~l~G~S~Gg~ia~~~a~~~-----------~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (251)
T TIGR03695 65 DQLG-IEPFFLVGYSMGGRIALYYALQY-----------PERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGL 132 (251)
T ss_pred HHcC-CCeEEEEEeccHHHHHHHHHHhC-----------chheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCc
Confidence 4332 34899999999999999999954 6778888877653211100
Q ss_pred --hhh---------c---ccc-------------------------------chHHHhhhcCCCEEEEccCCCCcccchh
Q 025121 172 --LRN---------K---IEG-------------------------------SHEAARRAASLPILLTHGLCDDVVPYKY 206 (257)
Q Consensus 172 --~~~---------~---~~~-------------------------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~ 206 (257)
+.. . ... ........+++|+++++|++|..++ +.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~ 211 (251)
T TIGR03695 133 EAFLDDWYQQPLFASQKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QI 211 (251)
T ss_pred cHHHHHHhcCceeeecccCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HH
Confidence 000 0 000 0001123578999999999998764 34
Q ss_pred hHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 207 GEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 207 ~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
.+.+.+.++ +.++++++++||.+..+..+.+.+.+.+++
T Consensus 212 ~~~~~~~~~-----~~~~~~~~~~gH~~~~e~~~~~~~~i~~~l 250 (251)
T TIGR03695 212 AKEMQKLLP-----NLTLVIIANAGHNIHLENPEAFAKILLAFL 250 (251)
T ss_pred HHHHHhcCC-----CCcEEEEcCCCCCcCccChHHHHHHHHHHh
Confidence 444544443 678999999999988766666666666554
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-21 Score=138.05 Aligned_cols=145 Identities=24% Similarity=0.318 Sum_probs=110.7
Q ss_pred EEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhcc
Q 025121 36 TIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLST 115 (257)
Q Consensus 36 ~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (257)
+||++||++++...|..+++.|++.||.|+.+|.|+++.+ .....+.+.++.+. +.
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~---------------------~~~~~~~~~~~~~~---~~ 56 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDS---------------------DGADAVERVLADIR---AG 56 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTS---------------------HHSHHHHHHHHHHH---HH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCcc---------------------chhHHHHHHHHHHH---hh
Confidence 6899999999999999999999989999999998864321 01112233333332 11
Q ss_pred CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhhhcCCCEEEEc
Q 025121 116 EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTH 195 (257)
Q Consensus 116 ~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~ 195 (257)
..+.++++++|||+||.+++.++.+ .++++++++++++.. .......+.|+++++
T Consensus 57 ~~~~~~i~l~G~S~Gg~~a~~~~~~------------~~~v~~~v~~~~~~~-------------~~~~~~~~~pv~~i~ 111 (145)
T PF12695_consen 57 YPDPDRIILIGHSMGGAIAANLAAR------------NPRVKAVVLLSPYPD-------------SEDLAKIRIPVLFIH 111 (145)
T ss_dssp HCTCCEEEEEEETHHHHHHHHHHHH------------STTESEEEEESESSG-------------CHHHTTTTSEEEEEE
T ss_pred cCCCCcEEEEEEccCcHHHHHHhhh------------ccceeEEEEecCccc-------------hhhhhccCCcEEEEE
Confidence 1244599999999999999999984 378999999998411 122345678999999
Q ss_pred cCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCc
Q 025121 196 GLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHY 233 (257)
Q Consensus 196 G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~ 233 (257)
|++|..++.+..++++++++. +.++++++|++|+
T Consensus 112 g~~D~~~~~~~~~~~~~~~~~----~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 112 GENDPLVPPEQVRRLYEALPG----PKELYIIPGAGHF 145 (145)
T ss_dssp ETT-SSSHHHHHHHHHHHHCS----SEEEEEETTS-TT
T ss_pred ECCCCcCCHHHHHHHHHHcCC----CcEEEEeCCCcCc
Confidence 999999999999999999982 6799999999995
|
... |
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-20 Score=152.97 Aligned_cols=190 Identities=17% Similarity=0.097 Sum_probs=122.3
Q ss_pred ceEEEEEccCCCCccchH--HHhhcC-------CCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025121 34 QATIVWLHGLGDNGSSWS--QLLESL-------PLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~--~~~~~l-------~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
.|+|||+||++++...|. .+.+.| ...+|+|+++|+||||.+....... .......++.+
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~-----------~~~~~~~~~~~ 137 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGL-----------RAAFPRYDYDD 137 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCC-----------CCCCCcccHHH
Confidence 578999999999887775 444333 2368999999999987654221000 00001234455
Q ss_pred HHHHHHHHh-ccCCCCceE-EEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCC-CC--chh--------
Q 025121 105 SAAHIANLL-STEPADVKV-GIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWL-PG--SRN-------- 171 (257)
Q Consensus 105 ~~~~~~~~~-~~~~~~~~i-~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~--~~~-------- 171 (257)
.++++..++ ++.... ++ +|+||||||.+++.++.++ |++++++|++++.. .. ...
T Consensus 138 ~a~~~~~~l~~~lgi~-~~~~lvG~SmGG~vAl~~A~~~-----------P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~ 205 (360)
T PRK06489 138 MVEAQYRLVTEGLGVK-HLRLILGTSMGGMHAWMWGEKY-----------PDFMDALMPMASQPTEMSGRNWMWRRMLIE 205 (360)
T ss_pred HHHHHHHHHHHhcCCC-ceeEEEEECHHHHHHHHHHHhC-----------chhhheeeeeccCcccccHHHHHHHHHHHH
Confidence 566655544 333333 66 4899999999999999964 88888888776531 00 000
Q ss_pred -hh--------h-------------c---------------ccc---------------------------------chH
Q 025121 172 -LR--------N-------------K---------------IEG---------------------------------SHE 181 (257)
Q Consensus 172 -~~--------~-------------~---------------~~~---------------------------------~~~ 181 (257)
.. . . ... ...
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 285 (360)
T PRK06489 206 SIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSRDYNPS 285 (360)
T ss_pred HHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhccChH
Confidence 00 0 0 000 000
Q ss_pred HHhhhcCCCEEEEccCCCCcccchhh--HHHHHHhhhcCceeeEEEEecCC----CCccCHHHHHHHHHHHHHhcCc
Q 025121 182 AARRAASLPILLTHGLCDDVVPYKYG--EKSANCLSISGFRHLTFKSFEGL----GHYTVPKEMDEVCNWLTARLGL 252 (257)
Q Consensus 182 ~~~~~~~~P~l~~~G~~D~~v~~~~~--~~~~~~l~~~~~~~~~~~~~~g~----~H~~~~~~~~~~~~~l~~~l~~ 252 (257)
.....+++|+|+++|++|.++|.+.+ +.+.+.++ +.++++++++ ||..+ +..+.+.+.|.+++..
T Consensus 286 ~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip-----~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~ 356 (360)
T PRK06489 286 PDLEKIKAPVLAINSADDERNPPETGVMEAALKRVK-----HGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQ 356 (360)
T ss_pred HHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCc-----CCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHh
Confidence 12345789999999999999998875 67888776 6789999986 99987 5665555555555543
|
|
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=7e-21 Score=154.95 Aligned_cols=181 Identities=19% Similarity=0.252 Sum_probs=127.3
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
...++|||+||++++...|..+...|. .+|+|+++|+|++|.+.... ...++.+.+..+.+
T Consensus 129 ~~~~~vl~~HG~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~G~s~~~~------------------~~~~~~~~~~~~~~ 189 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNNWLFNHAALA-AGRPVIALDLPGHGASSKAV------------------GAGSLDELAAAVLA 189 (371)
T ss_pred CCCCeEEEECCCCCccchHHHHHHHHh-cCCEEEEEcCCCCCCCCCCC------------------CCCCHHHHHHHHHH
Confidence 446799999999999999999999987 45999999999876542111 12234556666666
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch---hh----------------
Q 025121 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR---NL---------------- 172 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~---------------- 172 (257)
+++..... +++|+|||+||.+++.++.+. +.++.+++++++...... .+
T Consensus 190 ~~~~~~~~-~~~lvG~S~Gg~~a~~~a~~~-----------~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (371)
T PRK14875 190 FLDALGIE-RAHLVGHSMGGAVALRLAARA-----------PQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPV 257 (371)
T ss_pred HHHhcCCc-cEEEEeechHHHHHHHHHHhC-----------chheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHH
Confidence 66654433 899999999999999999853 778899888876421100 00
Q ss_pred -----------hhc-----c-----c--------------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHH
Q 025121 173 -----------RNK-----I-----E--------------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSA 211 (257)
Q Consensus 173 -----------~~~-----~-----~--------------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~ 211 (257)
... . . .........+++|+++++|++|.++|.+.++.+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l- 336 (371)
T PRK14875 258 LELLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGL- 336 (371)
T ss_pred HHHHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhc-
Confidence 000 0 0 000012345789999999999999998765433
Q ss_pred HHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 212 NCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 212 ~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
.. ++++.+++++||.+..+..+.+.+.|.++++
T Consensus 337 ---~~----~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 369 (371)
T PRK14875 337 ---PD----GVAVHVLPGAGHMPQMEAAADVNRLLAEFLG 369 (371)
T ss_pred ---cC----CCeEEEeCCCCCChhhhCHHHHHHHHHHHhc
Confidence 21 4688999999999987777777777777664
|
|
| >KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-20 Score=143.92 Aligned_cols=190 Identities=20% Similarity=0.227 Sum_probs=134.3
Q ss_pred CCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025121 29 PKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 29 ~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
......|+|+++||+.....+|+.+...|+..||+|+++|+||-|.+. .+.....+++...+.+
T Consensus 39 ~g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd----------------~P~~~~~Yt~~~l~~d 102 (322)
T KOG4178|consen 39 GGPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSD----------------APPHISEYTIDELVGD 102 (322)
T ss_pred ecCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCC----------------CCCCcceeeHHHHHHH
Confidence 344578999999999999999999999999999999999998644322 2233356677888888
Q ss_pred HHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc-------------------
Q 025121 109 IANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS------------------- 169 (257)
Q Consensus 109 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------------- 169 (257)
+..+++..... +++++||+||+.+|+.++... |+++.+++.++...+..
T Consensus 103 i~~lld~Lg~~-k~~lvgHDwGaivaw~la~~~-----------Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~ 170 (322)
T KOG4178|consen 103 IVALLDHLGLK-KAFLVGHDWGAIVAWRLALFY-----------PERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYIC 170 (322)
T ss_pred HHHHHHHhccc-eeEEEeccchhHHHHHHHHhC-----------hhhcceEEEecCCCCCcccchhhhhccccCccceeE
Confidence 88888877644 999999999999999999954 88899888776532200
Q ss_pred --------hh-----------------------h-------------h----------------------hccccch---
Q 025121 170 --------RN-----------------------L-------------R----------------------NKIEGSH--- 180 (257)
Q Consensus 170 --------~~-----------------------~-------------~----------------------~~~~~~~--- 180 (257)
+. . . +.+.+..
T Consensus 171 ~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~ 250 (322)
T KOG4178|consen 171 LFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAA 250 (322)
T ss_pred eccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhc
Confidence 00 0 0 0000000
Q ss_pred HHHhhhcCCCEEEEccCCCCcccchh-hHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 181 EAARRAASLPILLTHGLCDDVVPYKY-GEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 181 ~~~~~~~~~P~l~~~G~~D~~v~~~~-~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
......+.+|+++++|+.|.+.+... ...+.+.++. -.+.++++|+||++++|..+.+.+.+.+++
T Consensus 251 ~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~----l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~ 317 (322)
T KOG4178|consen 251 PWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPR----LTERVVIEGIGHFVQQEKPQEVNQAILGFI 317 (322)
T ss_pred cccccccccceEEEEecCcccccchhHHHHHHHhhcc----ccceEEecCCcccccccCHHHHHHHHHHHH
Confidence 11234467999999999999998763 3334444432 237889999999999766555554444443
|
|
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-20 Score=151.13 Aligned_cols=186 Identities=17% Similarity=0.118 Sum_probs=133.0
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
..++|||+||++++...|..++..|+ .+|+|+++|+||+|.+..... ......++.+.++++..+
T Consensus 126 ~~~~ivllHG~~~~~~~w~~~~~~L~-~~~~Via~DlpG~G~S~~p~~--------------~~~~~ys~~~~a~~l~~~ 190 (383)
T PLN03084 126 NNPPVLLIHGFPSQAYSYRKVLPVLS-KNYHAIAFDWLGFGFSDKPQP--------------GYGFNYTLDEYVSSLESL 190 (383)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHh-cCCEEEEECCCCCCCCCCCcc--------------cccccCCHHHHHHHHHHH
Confidence 46799999999999999999999997 589999999998875432210 001123556677777777
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc-----hh----------------
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS-----RN---------------- 171 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~---------------- 171 (257)
+++.... ++.|+|||+||.+++.++.+. |++++++|++++..... ..
T Consensus 191 i~~l~~~-~~~LvG~s~GG~ia~~~a~~~-----------P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~ 258 (383)
T PLN03084 191 IDELKSD-KVSLVVQGYFSPPVVKYASAH-----------PDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQD 258 (383)
T ss_pred HHHhCCC-CceEEEECHHHHHHHHHHHhC-----------hHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcc
Confidence 7765544 899999999999999999854 78888888887643210 00
Q ss_pred -hh---hc----------------ccc------c---h-----H-H---------Hh------hhcCCCEEEEccCCCCc
Q 025121 172 -LR---NK----------------IEG------S---H-----E-A---------AR------RAASLPILLTHGLCDDV 201 (257)
Q Consensus 172 -~~---~~----------------~~~------~---~-----~-~---------~~------~~~~~P~l~~~G~~D~~ 201 (257)
.. .. +.. . . . . .. ..+++|+++++|+.|.+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~ 338 (383)
T PLN03084 259 PLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRW 338 (383)
T ss_pred hHHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCC
Confidence 00 00 000 0 0 0 0 00 13589999999999999
Q ss_pred ccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 202 VPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 202 v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
++.+.++.+.+.. +.++++++++||.++.|..+.+.+.|.+++.
T Consensus 339 v~~~~~~~~a~~~------~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 339 LNYDGVEDFCKSS------QHKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred cCHHHHHHHHHhc------CCeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 9998877777753 4589999999999998887777777776654
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-20 Score=150.39 Aligned_cols=196 Identities=18% Similarity=0.197 Sum_probs=120.6
Q ss_pred CCceEEEEEccCCCCcc-ch-------------------------HHHhhcCCCCceEEEccCCCCCCcccCCCCccccc
Q 025121 32 KHQATIVWLHGLGDNGS-SW-------------------------SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAW 85 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~-~~-------------------------~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w 85 (257)
+++.+|+++||++++.. .| ..+++.|.+.||.|+++|+||||.+.....
T Consensus 19 ~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rGHG~S~~~~~----- 93 (332)
T TIGR01607 19 NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQGHGESDGLQN----- 93 (332)
T ss_pred CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccccCCCccccc-----
Confidence 57789999999999986 21 357889988999999999999875442210
Q ss_pred ccCCCCCCCCCCchhhHHHHHHHHHHHhcc----------------------CCC-CceEEEEEechhHHHHHHHHHhcc
Q 025121 86 FDVGELSDDGPEDWEGLDASAAHIANLLST----------------------EPA-DVKVGIGGFSMGAAVALYSATCCA 142 (257)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~-~~~i~l~G~S~Gg~~a~~~~~~~~ 142 (257)
......++.+.++++..+++. ... ..+++|+||||||.+++.++.+.+
T Consensus 94 ---------~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~ 164 (332)
T TIGR01607 94 ---------LRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLG 164 (332)
T ss_pred ---------cccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhc
Confidence 000012333333333333321 122 348999999999999999886431
Q ss_pred ccCCCCCCCcccccceEEEeccCCCCch-----------h---h--------------h-hccccc--------------
Q 025121 143 LGRYGNGIPYYVNLRAVVGLSGWLPGSR-----------N---L--------------R-NKIEGS-------------- 179 (257)
Q Consensus 143 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----------~---~--------------~-~~~~~~-------------- 179 (257)
.... ......++++|+++|.+.... . + . ..+...
T Consensus 165 ~~~~---~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~Dp~~~ 241 (332)
T TIGR01607 165 KSNE---NNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVNDIIKFDKFRY 241 (332)
T ss_pred cccc---cccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhhhhHHhcCcccc
Confidence 1000 000124777776665421000 0 0 0 000000
Q ss_pred ----------------h--HHHhhhc--CCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHH--
Q 025121 180 ----------------H--EAARRAA--SLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPK-- 237 (257)
Q Consensus 180 ----------------~--~~~~~~~--~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~-- 237 (257)
. ......+ ++|+|+++|++|.+++++.++.+++++... +++++++++++|.+..+
T Consensus 242 ~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~---~~~l~~~~g~~H~i~~E~~ 318 (332)
T TIGR01607 242 DGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSIS---NKELHTLEDMDHVITIEPG 318 (332)
T ss_pred CCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCC---CcEEEEECCCCCCCccCCC
Confidence 0 0011223 689999999999999999988888877543 57899999999998743
Q ss_pred ---HHHHHHHHHH
Q 025121 238 ---EMDEVCNWLT 247 (257)
Q Consensus 238 ---~~~~~~~~l~ 247 (257)
..+.+.+||.
T Consensus 319 ~~~v~~~i~~wL~ 331 (332)
T TIGR01607 319 NEEVLKKIIEWIS 331 (332)
T ss_pred HHHHHHHHHHHhh
Confidence 3456666663
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.2e-21 Score=144.84 Aligned_cols=181 Identities=20% Similarity=0.207 Sum_probs=124.4
Q ss_pred hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhccC-CCCceEEEEEec
Q 025121 50 WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTE-PADVKVGIGGFS 128 (257)
Q Consensus 50 ~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~G~S 128 (257)
|......|+.+||.|+.+|.||.+ |++ ..|.... ........+.+.+..+..++++. .+.++|+++|+|
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~-----g~g-~~~~~~~----~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S 72 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSG-----GYG-KDFHEAG----RGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHS 72 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSS-----SSH-HHHHHTT----TTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEET
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCC-----ccc-hhHHHhh----hccccccchhhHHHHHHHHhccccccceeEEEEccc
Confidence 345567777899999999988542 211 1222111 11222345566666666665554 344699999999
Q ss_pred hhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhc-------c---cc---c--------hHHHhhh-
Q 025121 129 MGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNK-------I---EG---S--------HEAARRA- 186 (257)
Q Consensus 129 ~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-------~---~~---~--------~~~~~~~- 186 (257)
+||++++.++.+. ++.++++++.+|........... . .. . +......
T Consensus 73 ~GG~~a~~~~~~~-----------~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 141 (213)
T PF00326_consen 73 YGGYLALLAATQH-----------PDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISPADNV 141 (213)
T ss_dssp HHHHHHHHHHHHT-----------CCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGGGGGC
T ss_pred ccccccchhhccc-----------ceeeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhccccccccc
Confidence 9999999999853 88999999999876543222111 0 00 0 1112334
Q ss_pred -cCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC-----HHHHHHHHHHHHHhcCc
Q 025121 187 -ASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-----PKEMDEVCNWLTARLGL 252 (257)
Q Consensus 187 -~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-----~~~~~~~~~~l~~~l~~ 252 (257)
.++|+|++||++|..||++++.++++.|++.+. +++++++|+++|.+. .+..+++.+||.+.|+.
T Consensus 142 ~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~-~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 142 QIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGK-PVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLKK 212 (213)
T ss_dssp GGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTS-SEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT-
T ss_pred cCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCC-CEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcCC
Confidence 789999999999999999999999999999998 799999999999776 34568899999998863
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.5e-20 Score=145.19 Aligned_cols=185 Identities=15% Similarity=0.061 Sum_probs=120.7
Q ss_pred CceEEEEEccCCCCccc-hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSS-WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~-~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
.+++|||+||+.++... |..+...+...||.|+++|.||+|.+..... .....++.+.++++..
T Consensus 24 ~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~---------------~~~~~~~~~~~~~~~~ 88 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDD---------------SDELWTIDYFVDELEE 88 (288)
T ss_pred CCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCc---------------ccccccHHHHHHHHHH
Confidence 35789999997655544 4555566654589999999998765432110 0001344555566666
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhh------------------h
Q 025121 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL------------------R 173 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~------------------~ 173 (257)
+++..... +++++||||||.+++.++.+. |.++.+++++++........ .
T Consensus 89 ~~~~~~~~-~~~liG~S~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (288)
T TIGR01250 89 VREKLGLD-KFYLLGHSWGGMLAQEYALKY-----------GQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIK 156 (288)
T ss_pred HHHHcCCC-cEEEEEeehHHHHHHHHHHhC-----------ccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHH
Confidence 66554333 799999999999999999854 77888888776532211000 0
Q ss_pred ------------------hcc-------cc-----------------------------------chHHHhhhcCCCEEE
Q 025121 174 ------------------NKI-------EG-----------------------------------SHEAARRAASLPILL 193 (257)
Q Consensus 174 ------------------~~~-------~~-----------------------------------~~~~~~~~~~~P~l~ 193 (257)
... .. ........+++|+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~li 236 (288)
T TIGR01250 157 RCEASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLL 236 (288)
T ss_pred HHHhccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEE
Confidence 000 00 000122356899999
Q ss_pred EccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 194 THGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 194 ~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
++|++|.+ +++..+.+.+.++ +.++++++++||....+..+.+.+-|.+++
T Consensus 237 i~G~~D~~-~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 287 (288)
T TIGR01250 237 TVGEFDTM-TPEAAREMQELIA-----GSRLVVFPDGSHMTMIEDPEVYFKLLSDFI 287 (288)
T ss_pred EecCCCcc-CHHHHHHHHHhcc-----CCeEEEeCCCCCCcccCCHHHHHHHHHHHh
Confidence 99999985 5567777777765 568999999999988666666666555544
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.7e-20 Score=141.44 Aligned_cols=189 Identities=13% Similarity=0.100 Sum_probs=127.8
Q ss_pred CCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025121 29 PKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 29 ~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
.....+.++|++||+|.....|..-++.|+ ....|+++|+||-|.+..+. |+. +....-...++.
T Consensus 85 ~~~~~~~plVliHGyGAg~g~f~~Nf~~La-~~~~vyaiDllG~G~SSRP~------F~~--------d~~~~e~~fves 149 (365)
T KOG4409|consen 85 NESANKTPLVLIHGYGAGLGLFFRNFDDLA-KIRNVYAIDLLGFGRSSRPK------FSI--------DPTTAEKEFVES 149 (365)
T ss_pred ccccCCCcEEEEeccchhHHHHHHhhhhhh-hcCceEEecccCCCCCCCCC------CCC--------CcccchHHHHHH
Confidence 333566799999999999999999899998 49999999999765443322 111 111222355666
Q ss_pred HHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh-------------h---
Q 025121 109 IANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN-------------L--- 172 (257)
Q Consensus 109 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------------~--- 172 (257)
++++-...... +..|+|||+||+++..+|. +||++|..+|+++|+--..+. .
T Consensus 150 iE~WR~~~~L~-KmilvGHSfGGYLaa~YAl-----------KyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~ 217 (365)
T KOG4409|consen 150 IEQWRKKMGLE-KMILVGHSFGGYLAAKYAL-----------KYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKAL 217 (365)
T ss_pred HHHHHHHcCCc-ceeEeeccchHHHHHHHHH-----------hChHhhceEEEecccccccCCCcchhhcCCChHHHhhh
Confidence 66666655544 9999999999999999999 569999999999986221110 0
Q ss_pred ---------------------------------------hhcc-----------------------------ccch--HH
Q 025121 173 ---------------------------------------RNKI-----------------------------EGSH--EA 182 (257)
Q Consensus 173 ---------------------------------------~~~~-----------------------------~~~~--~~ 182 (257)
.+.+ +... ..
T Consensus 218 ~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~ 297 (365)
T KOG4409|consen 218 FLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRL 297 (365)
T ss_pred hhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHH
Confidence 0000 0000 00
Q ss_pred HhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHH
Q 025121 183 ARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTA 248 (257)
Q Consensus 183 ~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~ 248 (257)
......+|+++|+|++|.. +...+.++.+.+... .++.+++|++||.+..+..+...+-+.+
T Consensus 298 ~~l~~~~pv~fiyG~~dWm-D~~~g~~~~~~~~~~---~~~~~~v~~aGHhvylDnp~~Fn~~v~~ 359 (365)
T KOG4409|consen 298 RELKKDVPVTFIYGDRDWM-DKNAGLEVTKSLMKE---YVEIIIVPGAGHHVYLDNPEFFNQIVLE 359 (365)
T ss_pred HhhccCCCEEEEecCcccc-cchhHHHHHHHhhcc---cceEEEecCCCceeecCCHHHHHHHHHH
Confidence 1223469999999999975 555666677765433 6899999999999885555444444433
|
|
| >KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.9e-20 Score=136.70 Aligned_cols=194 Identities=19% Similarity=0.219 Sum_probs=141.2
Q ss_pred eEEeCCCCCCceEEEEEccCCCCccchHHHhhcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhH
Q 025121 24 THVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGL 102 (257)
Q Consensus 24 ~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 102 (257)
..++.+.....+++||.||...+......+...|. .-+++++.+|+.|- +.+.|. ..+...
T Consensus 50 ~~y~~~~~~~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGy--G~S~G~----------------psE~n~ 111 (258)
T KOG1552|consen 50 CMYVRPPEAAHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGY--GRSSGK----------------PSERNL 111 (258)
T ss_pred EEEEcCccccceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccc--cccCCC----------------cccccc
Confidence 34445555567899999998776665544555554 25899999997643 232221 112244
Q ss_pred HHHHHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccc----
Q 025121 103 DASAAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIE---- 177 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---- 177 (257)
.++++++.+++++.. .+++|+|+|+|+|...++.+|.+. + ++++|+.+|++...+.+.....
T Consensus 112 y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~-----------~--~~alVL~SPf~S~~rv~~~~~~~~~~ 178 (258)
T KOG1552|consen 112 YADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRY-----------P--LAAVVLHSPFTSGMRVAFPDTKTTYC 178 (258)
T ss_pred hhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcC-----------C--cceEEEeccchhhhhhhccCcceEEe
Confidence 555666677777655 456999999999999999999963 4 9999999998765554433111
Q ss_pred --c-chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC---HHHHHHHHHHHHHhcC
Q 025121 178 --G-SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV---PKEMDEVCNWLTARLG 251 (257)
Q Consensus 178 --~-~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~---~~~~~~~~~~l~~~l~ 251 (257)
. ......+.+++|+|++||++|++++..++.++++..+. .++..++.|+||... ++.++.+.+|+.....
T Consensus 179 ~d~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~----~~epl~v~g~gH~~~~~~~~yi~~l~~f~~~~~~ 254 (258)
T KOG1552|consen 179 FDAFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKE----KVEPLWVKGAGHNDIELYPEYIEHLRRFISSVLP 254 (258)
T ss_pred eccccccCcceeccCCEEEEecccCceecccccHHHHHhccc----cCCCcEEecCCCcccccCHHHHHHHHHHHHHhcc
Confidence 1 11334567889999999999999999999999999985 468889999999765 6788889999887655
Q ss_pred c
Q 025121 252 L 252 (257)
Q Consensus 252 ~ 252 (257)
.
T Consensus 255 ~ 255 (258)
T KOG1552|consen 255 S 255 (258)
T ss_pred c
Confidence 4
|
|
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.2e-20 Score=150.11 Aligned_cols=194 Identities=20% Similarity=0.160 Sum_probs=125.1
Q ss_pred eEEeCCCCCCceEEEEEccCCCCcc------------chHHHhh---cCCCCceEEEccCCCCCCcccCCCCcccccccC
Q 025121 24 THVVRPKGKHQATIVWLHGLGDNGS------------SWSQLLE---SLPLPNIKWICPTAPTRPVAILGGFPCTAWFDV 88 (257)
Q Consensus 24 ~~~~~~~~~~~~~vi~~HG~~~~~~------------~~~~~~~---~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~ 88 (257)
.+.|...++..+++||+||+.++.. .|..++. .|...+|+|+++|+||+|.+..
T Consensus 47 ~l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~----------- 115 (343)
T PRK08775 47 RLRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD----------- 115 (343)
T ss_pred eEEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC-----------
Confidence 3444444432334666666555544 5887776 5644689999999997653210
Q ss_pred CCCCCCCCCchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCC
Q 025121 89 GELSDDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPG 168 (257)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 168 (257)
. ...+.+.++++.++++.......++|+||||||.+++.++.++ |+++.++|++++....
T Consensus 116 ------~---~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~-----------P~~V~~LvLi~s~~~~ 175 (343)
T PRK08775 116 ------V---PIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRH-----------PARVRTLVVVSGAHRA 175 (343)
T ss_pred ------C---CCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHC-----------hHhhheEEEECccccC
Confidence 0 1223556777777777665442458999999999999999964 7888888887653210
Q ss_pred ch----------h-------------------------------hhhccccc------------h---------------
Q 025121 169 SR----------N-------------------------------LRNKIEGS------------H--------------- 180 (257)
Q Consensus 169 ~~----------~-------------------------------~~~~~~~~------------~--------------- 180 (257)
.. . +...+... .
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 255 (343)
T PRK08775 176 HPYAAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTP 255 (343)
T ss_pred CHHHHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcC
Confidence 00 0 00000000 0
Q ss_pred --------------HHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecC-CCCccCHHHHHHHHHH
Q 025121 181 --------------EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEG-LGHYTVPKEMDEVCNW 245 (257)
Q Consensus 181 --------------~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g-~~H~~~~~~~~~~~~~ 245 (257)
......+++|+|+++|+.|.++|++.++.+.+.+.. +.+++++++ +||....|..+.+.+-
T Consensus 256 ~~~~~~~~~~~~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p----~a~l~~i~~~aGH~~~lE~Pe~~~~~ 331 (343)
T PRK08775 256 VNAYLRLSESIDLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGP----RGSLRVLRSPYGHDAFLKETDRIDAI 331 (343)
T ss_pred hhHHHHHHHHHhhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCC----CCeEEEEeCCccHHHHhcCHHHHHHH
Confidence 001235678999999999999999888888888742 568999985 8999986666666655
Q ss_pred HHHhcCc
Q 025121 246 LTARLGL 252 (257)
Q Consensus 246 l~~~l~~ 252 (257)
|.+++..
T Consensus 332 l~~FL~~ 338 (343)
T PRK08775 332 LTTALRS 338 (343)
T ss_pred HHHHHHh
Confidence 5555543
|
|
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2e-20 Score=137.24 Aligned_cols=161 Identities=21% Similarity=0.274 Sum_probs=108.4
Q ss_pred eEEEEEccCCCCccchHH--HhhcCCC--CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025121 35 ATIVWLHGLGDNGSSWSQ--LLESLPL--PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 35 ~~vi~~HG~~~~~~~~~~--~~~~l~~--~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
|+|||+||++++...|.. +...+.. .++.|+++|+|+++ .+..+.+.
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-----------------------------~~~~~~l~ 52 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-----------------------------ADAAELLE 52 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-----------------------------HHHHHHHH
Confidence 579999999999999874 3454432 47999999988421 23455566
Q ss_pred HHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhc------------ccc
Q 025121 111 NLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNK------------IEG 178 (257)
Q Consensus 111 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~------------~~~ 178 (257)
+++++.... +++++|+||||.+++.++.+. +. .++++++.....+.+... +..
T Consensus 53 ~l~~~~~~~-~~~lvG~S~Gg~~a~~~a~~~-----------~~---~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (190)
T PRK11071 53 SLVLEHGGD-PLGLVGSSLGGYYATWLSQCF-----------ML---PAVVVNPAVRPFELLTDYLGENENPYTGQQYVL 117 (190)
T ss_pred HHHHHcCCC-CeEEEEECHHHHHHHHHHHHc-----------CC---CEEEECCCCCHHHHHHHhcCCcccccCCCcEEE
Confidence 666654443 899999999999999999953 42 245666644321111100 000
Q ss_pred -------chHHH--hhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC--HHHHHHHHHHHH
Q 025121 179 -------SHEAA--RRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV--PKEMDEVCNWLT 247 (257)
Q Consensus 179 -------~~~~~--~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~ 247 (257)
..... ......|++++||++|++||++.+.++++.. +.++++|++|.+. .+..+.+.+|+.
T Consensus 118 ~~~~~~d~~~~~~~~i~~~~~v~iihg~~De~V~~~~a~~~~~~~--------~~~~~~ggdH~f~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 118 ESRHIYDLKVMQIDPLESPDLIWLLQQTGDEVLDYRQAVAYYAAC--------RQTVEEGGNHAFVGFERYFNQIVDFLG 189 (190)
T ss_pred cHHHHHHHHhcCCccCCChhhEEEEEeCCCCcCCHHHHHHHHHhc--------ceEEECCCCcchhhHHHhHHHHHHHhc
Confidence 00000 1125678899999999999999999888843 4557799999986 345677777764
|
|
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.9e-19 Score=134.91 Aligned_cols=207 Identities=19% Similarity=0.181 Sum_probs=145.5
Q ss_pred CCCCceEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCc
Q 025121 19 FEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPED 98 (257)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~ 98 (257)
..+...+..+....+.|.||++|++.+-....+.+++.|+..||.|++||+-.+......-.......... ......
T Consensus 12 ~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~---~~~~~~ 88 (236)
T COG0412 12 GELPAYLARPAGAGGFPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETG---LVERVD 88 (236)
T ss_pred ceEeEEEecCCcCCCCCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhh---hhccCC
Confidence 34444444444444559999999999999999999999999999999999654321111100000001000 001111
Q ss_pred hhhHHHHHHHHHHHhccCC--CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc
Q 025121 99 WEGLDASAAHIANLLSTEP--ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI 176 (257)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 176 (257)
......++....+++.... ...+|+++|+||||.+++.++.+ .+.+++.+++.|.........
T Consensus 89 ~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~------------~~~v~a~v~fyg~~~~~~~~~--- 153 (236)
T COG0412 89 PAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATR------------APEVKAAVAFYGGLIADDTAD--- 153 (236)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcc------------cCCccEEEEecCCCCCCcccc---
Confidence 2344444555555665443 34589999999999999999984 238999999988665433222
Q ss_pred ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCH---------------HHHHH
Q 025121 177 EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVP---------------KEMDE 241 (257)
Q Consensus 177 ~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~---------------~~~~~ 241 (257)
...+++|+++.+|+.|..+|.+....+.+.+.++++ ++++.+|+++.|.+.. +.+++
T Consensus 154 -------~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~-~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~ 225 (236)
T COG0412 154 -------APKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGV-KVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQR 225 (236)
T ss_pred -------cccccCcEEEEecccCCCCChhHHHHHHHHHHhcCC-CeeEEEeCCCccccccCCCcccccCCHHHHHHHHHH
Confidence 346799999999999999999999999999998875 7899999999898762 24788
Q ss_pred HHHHHHHhcC
Q 025121 242 VCNWLTARLG 251 (257)
Q Consensus 242 ~~~~l~~~l~ 251 (257)
+.+|+++.+.
T Consensus 226 ~~~ff~~~~~ 235 (236)
T COG0412 226 VLAFFKRLLG 235 (236)
T ss_pred HHHHHHHhcc
Confidence 9999988764
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.6e-19 Score=146.15 Aligned_cols=191 Identities=12% Similarity=0.041 Sum_probs=122.6
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
...|+|||+||++++...|...+..|+ .+|+|+++|+||+|.+.... +.. ..........++.+.+
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~~~~~L~-~~~~vi~~D~rG~G~S~~~~------~~~-------~~~~~~~~~~~~~i~~ 168 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFRNFDALA-SRFRVIAIDQLGWGGSSRPD------FTC-------KSTEETEAWFIDSFEE 168 (402)
T ss_pred CCCCEEEEECCCCcchhHHHHHHHHHH-hCCEEEEECCCCCCCCCCCC------ccc-------ccHHHHHHHHHHHHHH
Confidence 456899999999999888888888887 46999999999887543211 000 0001111223445555
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc--hh------------------
Q 025121 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--RN------------------ 171 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~------------------ 171 (257)
+++..... +++|+||||||.+++.++.+. +.+++++|++++..... ..
T Consensus 169 ~~~~l~~~-~~~lvGhS~GG~la~~~a~~~-----------p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (402)
T PLN02894 169 WRKAKNLS-NFILLGHSFGGYVAAKYALKH-----------PEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLN 236 (402)
T ss_pred HHHHcCCC-CeEEEEECHHHHHHHHHHHhC-----------chhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHH
Confidence 55544333 899999999999999999964 67777777665431000 00
Q ss_pred ---------------------------hhhc---------c------------------------------------ccc
Q 025121 172 ---------------------------LRNK---------I------------------------------------EGS 179 (257)
Q Consensus 172 ---------------------------~~~~---------~------------------------------------~~~ 179 (257)
.... + ...
T Consensus 237 ~~~~~~~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (402)
T PLN02894 237 HLWESNFTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKP 316 (402)
T ss_pred HHhhcCCCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcch
Confidence 0000 0 000
Q ss_pred hHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHH----HHHHHHHHHHHhcCcC
Q 025121 180 HEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPK----EMDEVCNWLTARLGLE 253 (257)
Q Consensus 180 ~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~----~~~~~~~~l~~~l~~~ 253 (257)
.......+++|+++++|++|.+.+ .....+.+.+.. .+++++++++||....| ..+.+.+|++.++...
T Consensus 317 ~~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~----~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~~ 389 (402)
T PLN02894 317 LLESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKV----PCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSPD 389 (402)
T ss_pred HhhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCC----CCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccCC
Confidence 001124468999999999998765 555555555421 46899999999998744 3456777777777654
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.5e-19 Score=141.04 Aligned_cols=183 Identities=16% Similarity=0.103 Sum_probs=120.7
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.++|||+||+.++...+ .+...+...+|+|+++|+||+|.+..... .......+.+.++..++
T Consensus 27 ~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~----------------~~~~~~~~~~~dl~~l~ 89 (306)
T TIGR01249 27 GKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHAC----------------LEENTTWDLVADIEKLR 89 (306)
T ss_pred CCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCC----------------cccCCHHHHHHHHHHHH
Confidence 56799999987776543 34445545689999999998875432110 00112334455555555
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc------------------------
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS------------------------ 169 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------------------ 169 (257)
+..... +++++||||||.+++.++.+. +++++++|+++.+....
T Consensus 90 ~~l~~~-~~~lvG~S~GG~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (306)
T TIGR01249 90 EKLGIK-NWLVFGGSWGSTLALAYAQTH-----------PEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFMD 157 (306)
T ss_pred HHcCCC-CEEEEEECHHHHHHHHHHHHC-----------hHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHHhh
Confidence 544333 899999999999999999854 66666666654322100
Q ss_pred ---hhhh-------------------------------h-ccccc-----------------hH----------------
Q 025121 170 ---RNLR-------------------------------N-KIEGS-----------------HE---------------- 181 (257)
Q Consensus 170 ---~~~~-------------------------------~-~~~~~-----------------~~---------------- 181 (257)
.... . ..... ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (306)
T TIGR01249 158 SIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLDVEN 237 (306)
T ss_pred hCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchhcCch
Confidence 0000 0 00000 00
Q ss_pred ---HHhhhc-CCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC-HHHHHHHHHHHHHhc
Q 025121 182 ---AARRAA-SLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-PKEMDEVCNWLTARL 250 (257)
Q Consensus 182 ---~~~~~~-~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~~l~~~l 250 (257)
.....+ ++|+++++|++|.++|.+.++.+++.++ +.++++++++||... ++..+.+.+|+.++|
T Consensus 238 ~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~i~~~~~~~~ 306 (306)
T TIGR01249 238 FILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFP-----EAELKVTNNAGHSAFDPNNLAALVHALETYL 306 (306)
T ss_pred HHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCC-----CCEEEEECCCCCCCCChHHHHHHHHHHHHhC
Confidence 011223 5899999999999999999999998886 568999999999986 567889999998764
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.1e-19 Score=144.91 Aligned_cols=199 Identities=18% Similarity=0.152 Sum_probs=126.8
Q ss_pred CceEEEEEccCCCCcc-----------chHHHh---hcCCCCceEEEccCCCCC--CcccCCCCcccccccCCCCCCCCC
Q 025121 33 HQATIVWLHGLGDNGS-----------SWSQLL---ESLPLPNIKWICPTAPTR--PVAILGGFPCTAWFDVGELSDDGP 96 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~-----------~~~~~~---~~l~~~g~~v~~~d~~~~--g~~~~~g~~~~~w~~~~~~~~~~~ 96 (257)
..++|||+||++++.. .|..++ +.|...+|.|+++|+||+ |.+.... |.. .+......
T Consensus 30 ~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~-----~~~-~~~~~~~~ 103 (351)
T TIGR01392 30 RSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSS-----INP-GGRPYGSD 103 (351)
T ss_pred CCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCC-----CCC-CCCcCCCC
Confidence 3579999999999762 366664 355568999999999984 3321100 000 00000001
Q ss_pred CchhhHHHHHHHHHHHhccCCCCce-EEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-----
Q 025121 97 EDWEGLDASAAHIANLLSTEPADVK-VGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR----- 170 (257)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----- 170 (257)
.....+.+.++++..++++.... + ++|+||||||.+++.++.++ |++++++|++++......
T Consensus 104 ~~~~~~~~~~~~~~~~~~~l~~~-~~~~l~G~S~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~ 171 (351)
T TIGR01392 104 FPLITIRDDVKAQKLLLDHLGIE-QIAAVVGGSMGGMQALEWAIDY-----------PERVRAIVVLATSARHSAWCIAF 171 (351)
T ss_pred CCCCcHHHHHHHHHHHHHHcCCC-CceEEEEECHHHHHHHHHHHHC-----------hHhhheEEEEccCCcCCHHHHHH
Confidence 11345667777777777766444 6 99999999999999999964 777777777655321000
Q ss_pred ------h---------------------h-----------------hhccc-----------------------------
Q 025121 171 ------N---------------------L-----------------RNKIE----------------------------- 177 (257)
Q Consensus 171 ------~---------------------~-----------------~~~~~----------------------------- 177 (257)
. + ...+.
T Consensus 172 ~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (351)
T TIGR01392 172 NEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDK 251 (351)
T ss_pred HHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHH
Confidence 0 0 00000
Q ss_pred ------c---------c-----------hHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEE-EecCC
Q 025121 178 ------G---------S-----------HEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFK-SFEGL 230 (257)
Q Consensus 178 ------~---------~-----------~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~-~~~g~ 230 (257)
. . .......+++|+|+++|++|.++|++.++.+.+.++.... .++++ +++++
T Consensus 252 ~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~-~v~~~~i~~~~ 330 (351)
T TIGR01392 252 FVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGL-RVTYVEIESPY 330 (351)
T ss_pred HHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCC-ceEEEEeCCCC
Confidence 0 0 0112335678999999999999999999999999985422 22333 44689
Q ss_pred CCccCHHHHHHHHHHHHHhc
Q 025121 231 GHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 231 ~H~~~~~~~~~~~~~l~~~l 250 (257)
||..+.+..+.+.+.|.+++
T Consensus 331 GH~~~le~p~~~~~~l~~FL 350 (351)
T TIGR01392 331 GHDAFLVETDQVEELIRGFL 350 (351)
T ss_pred CcchhhcCHHHHHHHHHHHh
Confidence 99998777777766666654
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.5e-19 Score=143.13 Aligned_cols=194 Identities=13% Similarity=0.045 Sum_probs=120.0
Q ss_pred CceEEEEEccCCCCccchHHHh---hcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLL---ESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~---~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
..|+||+.||++++...|..++ ..|...+|+|+++|+||+|.+......... +... ......+.+++...
T Consensus 40 ~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~-~~~~------~~~~~~~~~~~~~~ 112 (339)
T PRK07581 40 KDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAP-FNAA------RFPHVTIYDNVRAQ 112 (339)
T ss_pred CCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCC-CCCC------CCCceeHHHHHHHH
Confidence 3467888888887776665543 466557899999999998765432110000 0000 00112234444443
Q ss_pred HH-HhccCCCCce-EEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-----------------
Q 025121 110 AN-LLSTEPADVK-VGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR----------------- 170 (257)
Q Consensus 110 ~~-~~~~~~~~~~-i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----------------- 170 (257)
.. +++..... + ++|+||||||.+++.++.++ |++++++|++++......
T Consensus 113 ~~~l~~~lgi~-~~~~lvG~S~GG~va~~~a~~~-----------P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~ 180 (339)
T PRK07581 113 HRLLTEKFGIE-RLALVVGWSMGAQQTYHWAVRY-----------PDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADP 180 (339)
T ss_pred HHHHHHHhCCC-ceEEEEEeCHHHHHHHHHHHHC-----------HHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCC
Confidence 33 33334333 7 57999999999999999965 788888887744221000
Q ss_pred --------------------hh----------h-------------h----c---c-c--c-------------------
Q 025121 171 --------------------NL----------R-------------N----K---I-E--G------------------- 178 (257)
Q Consensus 171 --------------------~~----------~-------------~----~---~-~--~------------------- 178 (257)
.. . . . . . .
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 260 (339)
T PRK07581 181 AFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRN 260 (339)
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccC
Confidence 00 0 0 0 0 0 0
Q ss_pred -----chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecC-CCCccCHHH----HHHHHHHHHH
Q 025121 179 -----SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEG-LGHYTVPKE----MDEVCNWLTA 248 (257)
Q Consensus 179 -----~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g-~~H~~~~~~----~~~~~~~l~~ 248 (257)
........+++|+|+++|++|.++|++.++.+.+.++ +.+++++++ +||....+. ...+.+|+.+
T Consensus 261 ~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip-----~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~ 335 (339)
T PRK07581 261 PAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIP-----NAELRPIESIWGHLAGFGQNPADIAFIDAALKE 335 (339)
T ss_pred cccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-----CCeEEEeCCCCCccccccCcHHHHHHHHHHHHH
Confidence 0011223468999999999999999999888888886 668999998 899877444 4555556655
Q ss_pred hc
Q 025121 249 RL 250 (257)
Q Consensus 249 ~l 250 (257)
++
T Consensus 336 ~~ 337 (339)
T PRK07581 336 LL 337 (339)
T ss_pred HH
Confidence 54
|
|
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.1e-19 Score=146.13 Aligned_cols=191 Identities=12% Similarity=0.115 Sum_probs=120.1
Q ss_pred CCceEEEEEccCCCCccc-h-HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSS-W-SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~-~-~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
...|+||++||++++... | ..++..+...||+|+++|+||+|.+.... ..++ .....+++..+
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~---~~~~------------~~~~~~Dl~~~ 162 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTT---PQFY------------SASFTGDLRQV 162 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCC---cCEE------------cCCchHHHHHH
Confidence 456899999999776654 5 44666555689999999999887543211 0111 11112333444
Q ss_pred HHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccc--cceEEEeccCCCCc---------------hhh
Q 025121 110 ANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVN--LRAVVGLSGWLPGS---------------RNL 172 (257)
Q Consensus 110 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~---------------~~~ 172 (257)
.+.+.......+++++||||||.+++.++.+. +++ +.+++++++..... ..+
T Consensus 163 i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~-----------~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y~~~~ 231 (388)
T PLN02511 163 VDHVAGRYPSANLYAAGWSLGANILVNYLGEE-----------GENCPLSGAVSLCNPFDLVIADEDFHKGFNNVYDKAL 231 (388)
T ss_pred HHHHHHHCCCCCEEEEEechhHHHHHHHHHhc-----------CCCCCceEEEEECCCcCHHHHHHHHhccHHHHHHHHH
Confidence 44444433334899999999999999999864 443 77777666533210 000
Q ss_pred h----h--------------cc-------------------------ccc--------hHHHhhhcCCCEEEEccCCCCc
Q 025121 173 R----N--------------KI-------------------------EGS--------HEAARRAASLPILLTHGLCDDV 201 (257)
Q Consensus 173 ~----~--------------~~-------------------------~~~--------~~~~~~~~~~P~l~~~G~~D~~ 201 (257)
. . .+ ... .......+++|+|+++|++|++
T Consensus 232 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi 311 (388)
T PLN02511 232 AKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPI 311 (388)
T ss_pred HHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCc
Confidence 0 0 00 000 0012345789999999999999
Q ss_pred ccchhh-HHHHHHhhhcCceeeEEEEecCCCCccCHHH----------HHHHHHHHHHhcCcC
Q 025121 202 VPYKYG-EKSANCLSISGFRHLTFKSFEGLGHYTVPKE----------MDEVCNWLTARLGLE 253 (257)
Q Consensus 202 v~~~~~-~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~----------~~~~~~~l~~~l~~~ 253 (257)
+|.+.. ....+.++ ++++++++++||....|. .+.+.+||.......
T Consensus 312 ~p~~~~~~~~~~~~p-----~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~~~ 369 (388)
T PLN02511 312 APARGIPREDIKANP-----NCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEEGK 369 (388)
T ss_pred CCcccCcHhHHhcCC-----CEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHHhc
Confidence 998654 33444443 789999999999766332 477888998765543
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.5e-19 Score=141.34 Aligned_cols=191 Identities=19% Similarity=0.134 Sum_probs=118.3
Q ss_pred CCceEEEEEccCCCCccc--hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSS--WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
..+|+||++||++++... +..+++.|.+.||+|+++|+||+|.+.... ...+. .....+ +..+
T Consensus 56 ~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~---~~~~~--------~~~~~D----~~~~ 120 (324)
T PRK10985 56 RHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRL---HRIYH--------SGETED----ARFF 120 (324)
T ss_pred CCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCC---cceEC--------CCchHH----HHHH
Confidence 356899999999887554 455888888899999999999875321110 00000 011222 3333
Q ss_pred HHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh------------------
Q 025121 110 ANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN------------------ 171 (257)
Q Consensus 110 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------------------ 171 (257)
.+.+.+.....+++++||||||.+++.++.+.. ....+.+++++++.+.....
T Consensus 121 i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~---------~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~ 191 (324)
T PRK10985 121 LRWLQREFGHVPTAAVGYSLGGNMLACLLAKEG---------DDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQRYLLN 191 (324)
T ss_pred HHHHHHhCCCCCEEEEEecchHHHHHHHHHhhC---------CCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHHHHHHH
Confidence 333333333348999999999998888877431 01237777777765321100
Q ss_pred -hhhc------------------cc----------------------------cchHHHhhhcCCCEEEEccCCCCcccc
Q 025121 172 -LRNK------------------IE----------------------------GSHEAARRAASLPILLTHGLCDDVVPY 204 (257)
Q Consensus 172 -~~~~------------------~~----------------------------~~~~~~~~~~~~P~l~~~G~~D~~v~~ 204 (257)
+... +. .........+++|+++++|++|.+++.
T Consensus 192 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~ 271 (324)
T PRK10985 192 LLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTH 271 (324)
T ss_pred HHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCCh
Confidence 0000 00 000012355689999999999999998
Q ss_pred hhhHHHHHHhhhcCceeeEEEEecCCCCccCHH---------HHHHHHHHHHHhcC
Q 025121 205 KYGEKSANCLSISGFRHLTFKSFEGLGHYTVPK---------EMDEVCNWLTARLG 251 (257)
Q Consensus 205 ~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~---------~~~~~~~~l~~~l~ 251 (257)
+....+.+..+ ++++.+++++||....+ ..+.+.+|+...++
T Consensus 272 ~~~~~~~~~~~-----~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~~ 322 (324)
T PRK10985 272 EVIPKPESLPP-----NVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYLE 322 (324)
T ss_pred hhChHHHHhCC-----CeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhhc
Confidence 77766654443 67889999999975532 13668888876654
|
|
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.82 E-value=3e-19 Score=133.85 Aligned_cols=169 Identities=14% Similarity=0.150 Sum_probs=106.1
Q ss_pred CCCceEEEEEccCCCCccchH---HHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025121 31 GKHQATIVWLHGLGDNGSSWS---QLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~---~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
+++.|+||++||.+++...+. .+...+.+.|+.|++||.++++.. .....|+...... .......++.+.++
T Consensus 10 ~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~i~ 84 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSS----NNCWDWFFTHHRA-RGTGEVESLHQLID 84 (212)
T ss_pred CCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCcccc----CCCCCCCCccccC-CCCccHHHHHHHHH
Confidence 457899999999998877665 234444457999999999876421 1123444322111 11122333333344
Q ss_pred HHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-hhhhccc------cc-
Q 025121 108 HIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR-NLRNKIE------GS- 179 (257)
Q Consensus 108 ~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~------~~- 179 (257)
.+.+. .....++++|+|||+||.+++.++.+ +++.+++++.+++...... ....... ..
T Consensus 85 ~~~~~--~~id~~~i~l~G~S~Gg~~a~~~a~~-----------~p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 151 (212)
T TIGR01840 85 AVKAN--YSIDPNRVYVTGLSAGGGMTAVLGCT-----------YPDVFAGGASNAGLPYGEASSSISATPQMCTAATAA 151 (212)
T ss_pred HHHHh--cCcChhheEEEEECHHHHHHHHHHHh-----------CchhheEEEeecCCcccccccchhhHhhcCCCCCHH
Confidence 33321 12233599999999999999999985 4888999999988654221 0000000 00
Q ss_pred --hH------HHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhc
Q 025121 180 --HE------AARRAASLPILLTHGLCDDVVPYKYGEKSANCLSIS 217 (257)
Q Consensus 180 --~~------~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~ 217 (257)
.. ........|++++||++|.+||++.++.+.+++++.
T Consensus 152 ~~~~~~~~~~~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 152 SVCRLVRGMQSEYNGPTPIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred HHHHHHhccCCcccCCCCeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 00 011123455789999999999999999999999865
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.7e-18 Score=137.37 Aligned_cols=200 Identities=19% Similarity=0.161 Sum_probs=132.2
Q ss_pred EeCCCCCCceEEEEEccCC---CCccchHHHhhcCCC-CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhh
Q 025121 26 VVRPKGKHQATIVWLHGLG---DNGSSWSQLLESLPL-PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEG 101 (257)
Q Consensus 26 ~~~~~~~~~~~vi~~HG~~---~~~~~~~~~~~~l~~-~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 101 (257)
++.|..+..|+||++||.| ++...|..+++.|+. .|+.|+.+|+|..+. ...+....+
T Consensus 73 ~y~P~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape------------------~~~p~~~~D 134 (318)
T PRK10162 73 LYYPQPDSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPE------------------ARFPQAIEE 134 (318)
T ss_pred EECCCCCCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCC------------------CCCCCcHHH
Confidence 3344445578999999977 455567778888874 599999999773211 112223445
Q ss_pred HHHHHHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh-----hc
Q 025121 102 LDASAAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR-----NK 175 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-----~~ 175 (257)
..+.+.++.+..+... +.++|+|+|+|+||.+++.++.+..... ..+..++++++++|++...+... ..
T Consensus 135 ~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~-----~~~~~~~~~vl~~p~~~~~~~~s~~~~~~~ 209 (318)
T PRK10162 135 IVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQ-----IDCGKVAGVLLWYGLYGLRDSVSRRLLGGV 209 (318)
T ss_pred HHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcC-----CCccChhheEEECCccCCCCChhHHHhCCC
Confidence 5555555555544433 3459999999999999999987431100 01356888888888654321100 00
Q ss_pred ---c-------------c-----cchH-----HHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecC
Q 025121 176 ---I-------------E-----GSHE-----AARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEG 229 (257)
Q Consensus 176 ---~-------------~-----~~~~-----~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g 229 (257)
+ . ..+. ......-.|+++++|+.|.+. +.+..+.++++++|+ ++++++++|
T Consensus 210 ~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~--de~~~~~~~L~~aGv-~v~~~~~~g 286 (318)
T PRK10162 210 WDGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLL--DDSRLLYQTLAAHQQ-PCEFKLYPG 286 (318)
T ss_pred ccccCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCc--ChHHHHHHHHHHcCC-CEEEEEECC
Confidence 0 0 0000 000123469999999999985 468899999999998 899999999
Q ss_pred CCCccC---------HHHHHHHHHHHHHhcC
Q 025121 230 LGHYTV---------PKEMDEVCNWLTARLG 251 (257)
Q Consensus 230 ~~H~~~---------~~~~~~~~~~l~~~l~ 251 (257)
..|.+. .+.++.+.+||++.++
T Consensus 287 ~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 287 TLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred CceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 999764 2456788889988765
|
|
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.4e-18 Score=139.89 Aligned_cols=200 Identities=15% Similarity=0.073 Sum_probs=126.3
Q ss_pred ceEEEEEccCCCCccc-------------hHHHhh---cCCCCceEEEccCCCCCCc-ccCCCCcccccccCCCCCCCCC
Q 025121 34 QATIVWLHGLGDNGSS-------------WSQLLE---SLPLPNIKWICPTAPTRPV-AILGGFPCTAWFDVGELSDDGP 96 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~-------------~~~~~~---~l~~~g~~v~~~d~~~~g~-~~~~g~~~~~w~~~~~~~~~~~ 96 (257)
.|+|||+||++++... |..++. .|...+|+|+++|++|+.. +..+...... ........
T Consensus 48 ~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~----~~~~~~~~ 123 (379)
T PRK00175 48 SNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPD----TGKPYGSD 123 (379)
T ss_pred CCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCC----CCCcccCC
Confidence 5899999999999874 555542 3434799999999997421 1111000000 00000000
Q ss_pred CchhhHHHHHHHHHHHhccCCCCce-EEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-----
Q 025121 97 EDWEGLDASAAHIANLLSTEPADVK-VGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR----- 170 (257)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----- 170 (257)
....++.+.+.++.++++..... + ++|+||||||.+++.++.++ |++++++|++++......
T Consensus 124 ~~~~~~~~~~~~~~~~l~~l~~~-~~~~lvG~S~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~ 191 (379)
T PRK00175 124 FPVITIRDWVRAQARLLDALGIT-RLAAVVGGSMGGMQALEWAIDY-----------PDRVRSALVIASSARLSAQNIAF 191 (379)
T ss_pred CCcCCHHHHHHHHHHHHHHhCCC-CceEEEEECHHHHHHHHHHHhC-----------hHhhhEEEEECCCcccCHHHHHH
Confidence 11346677788888888776555 6 58999999999999999964 778888877764321100
Q ss_pred ------hhh---------------------------------------hccc---------------c------------
Q 025121 171 ------NLR---------------------------------------NKIE---------------G------------ 178 (257)
Q Consensus 171 ------~~~---------------------------------------~~~~---------------~------------ 178 (257)
.+. ..+. .
T Consensus 192 ~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 271 (379)
T PRK00175 192 NEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDK 271 (379)
T ss_pred HHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHH
Confidence 000 0000 0
Q ss_pred ----------------------------chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEec-C
Q 025121 179 ----------------------------SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFE-G 229 (257)
Q Consensus 179 ----------------------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~-g 229 (257)
........+++|+|+++|+.|.++|++.++.+.+.++..+. .+++++++ +
T Consensus 272 ~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~-~~~l~~i~~~ 350 (379)
T PRK00175 272 FVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGA-DVSYAEIDSP 350 (379)
T ss_pred HhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCC-CeEEEEeCCC
Confidence 00111245688999999999999999999999999986543 45777775 8
Q ss_pred CCCccCHHHHHHHHHHHHHhc
Q 025121 230 LGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 230 ~~H~~~~~~~~~~~~~l~~~l 250 (257)
+||....+..+.+.+-|.++|
T Consensus 351 ~GH~~~le~p~~~~~~L~~FL 371 (379)
T PRK00175 351 YGHDAFLLDDPRYGRLVRAFL 371 (379)
T ss_pred CCchhHhcCHHHHHHHHHHHH
Confidence 999988555444444444433
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.9e-19 Score=164.03 Aligned_cols=192 Identities=20% Similarity=0.241 Sum_probs=127.2
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
..++|||+||++++...|..++..|. .+|+|+++|+||||.+...... .........++...++++..+
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~-~~~rVi~~Dl~G~G~S~~~~~~----------~~~~~~~~~si~~~a~~l~~l 1438 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAIS-GSARCISIDLPGHGGSKIQNHA----------KETQTEPTLSVELVADLLYKL 1438 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHh-CCCEEEEEcCCCCCCCCCcccc----------ccccccccCCHHHHHHHHHHH
Confidence 45799999999999999999999997 5799999999988765322110 000011123445556666666
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch----------------------
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR---------------------- 170 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------------------- 170 (257)
+++.... +++|+||||||.+++.++.++ |+++++++++++......
T Consensus 1439 l~~l~~~-~v~LvGhSmGG~iAl~~A~~~-----------P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g 1506 (1655)
T PLN02980 1439 IEHITPG-KVTLVGYSMGARIALYMALRF-----------SDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHG 1506 (1655)
T ss_pred HHHhCCC-CEEEEEECHHHHHHHHHHHhC-----------hHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhh
Confidence 6654433 999999999999999999854 888888888765311100
Q ss_pred ---hhhhccc----------------------c-c------------------hHHHhhhcCCCEEEEccCCCCcccchh
Q 025121 171 ---NLRNKIE----------------------G-S------------------HEAARRAASLPILLTHGLCDDVVPYKY 206 (257)
Q Consensus 171 ---~~~~~~~----------------------~-~------------------~~~~~~~~~~P~l~~~G~~D~~v~~~~ 206 (257)
....++. . . .......+++|+|+++|++|..++ +.
T Consensus 1507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~ 1585 (1655)
T PLN02980 1507 LEIFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QI 1585 (1655)
T ss_pred HHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HH
Confidence 0000000 0 0 001234568999999999999875 56
Q ss_pred hHHHHHHhhhc-------CceeeEEEEecCCCCccCHHHHHH----HHHHHHH
Q 025121 207 GEKSANCLSIS-------GFRHLTFKSFEGLGHYTVPKEMDE----VCNWLTA 248 (257)
Q Consensus 207 ~~~~~~~l~~~-------~~~~~~~~~~~g~~H~~~~~~~~~----~~~~l~~ 248 (257)
+.++.+.+... +.+.+++++++++||.++.+..+. +.+||.+
T Consensus 1586 a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~ 1638 (1655)
T PLN02980 1586 AQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTR 1638 (1655)
T ss_pred HHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHh
Confidence 67777777642 011258999999999998665544 4455554
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-18 Score=149.84 Aligned_cols=91 Identities=16% Similarity=0.167 Sum_probs=69.4
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
..|+|||+||++++...|..+.+.|. .+|+|+++|+||+|.+.... .....++.+.++++..+
T Consensus 24 ~~~~ivllHG~~~~~~~w~~~~~~L~-~~~~Vi~~D~~G~G~S~~~~----------------~~~~~~~~~~a~dl~~~ 86 (582)
T PRK05855 24 DRPTVVLVHGYPDNHEVWDGVAPLLA-DRFRVVAYDVRGAGRSSAPK----------------RTAAYTLARLADDFAAV 86 (582)
T ss_pred CCCeEEEEcCCCchHHHHHHHHHHhh-cceEEEEecCCCCCCCCCCC----------------cccccCHHHHHHHHHHH
Confidence 46799999999999999999999995 78999999999887543211 11123456666677777
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHh
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
++......++.|+||||||.+++.++.+
T Consensus 87 i~~l~~~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 87 IDAVSPDRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred HHHhCCCCcEEEEecChHHHHHHHHHhC
Confidence 7665444369999999999999888775
|
|
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.5e-18 Score=133.21 Aligned_cols=211 Identities=16% Similarity=0.130 Sum_probs=126.0
Q ss_pred CCCceEEeCC-CCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCC-----CCcccccccCCCCCC
Q 025121 20 EFGRTHVVRP-KGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILG-----GFPCTAWFDVGELSD 93 (257)
Q Consensus 20 ~~~~~~~~~~-~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~-----g~~~~~w~~~~~~~~ 93 (257)
.+..++..+. .+.+.|+||.+||.++....+..... ++..|+.|+.+|.+|+|..... +.....|.. .+...
T Consensus 68 ~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~-~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~-~g~~~ 145 (320)
T PF05448_consen 68 RVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLP-WAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHIT-RGIDD 145 (320)
T ss_dssp EEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHH-HHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTT-TTTTS
T ss_pred EEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccc-cccCCeEEEEecCCCCCCCCCCccccCCCCCccHHh-cCccC
Confidence 3334454454 56778999999999999877766544 3458999999999988722211 111122221 22221
Q ss_pred -CCCCchhhH-HHHHHHHHHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc
Q 025121 94 -DGPEDWEGL-DASAAHIANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS 169 (257)
Q Consensus 94 -~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 169 (257)
........+ .+.+.. .+++... .+.++|++.|.|+||.+++.++.. .++|+++++..|++...
T Consensus 146 ~~e~~yyr~~~~D~~ra-vd~l~slpevD~~rI~v~G~SqGG~lal~~aaL------------d~rv~~~~~~vP~l~d~ 212 (320)
T PF05448_consen 146 NPEDYYYRRVYLDAVRA-VDFLRSLPEVDGKRIGVTGGSQGGGLALAAAAL------------DPRVKAAAADVPFLCDF 212 (320)
T ss_dssp -TTT-HHHHHHHHHHHH-HHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHH------------SST-SEEEEESESSSSH
T ss_pred chHHHHHHHHHHHHHHH-HHHHHhCCCcCcceEEEEeecCchHHHHHHHHh------------CccccEEEecCCCccch
Confidence 111112222 333333 3455443 334699999999999999999985 67899999888876432
Q ss_pred hhhh-------------hccc---c---------------chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcC
Q 025121 170 RNLR-------------NKIE---G---------------SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISG 218 (257)
Q Consensus 170 ~~~~-------------~~~~---~---------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~ 218 (257)
.... ..+. . ........+++|+++..|-.|.+||+...-..++.++.
T Consensus 213 ~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~-- 290 (320)
T PF05448_consen 213 RRALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPG-- 290 (320)
T ss_dssp HHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--S--
T ss_pred hhhhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCC--
Confidence 2111 0111 0 01114567899999999999999999999999999874
Q ss_pred ceeeEEEEecCCCCccCHHH-HHHHHHHHHHh
Q 025121 219 FRHLTFKSFEGLGHYTVPKE-MDEVCNWLTAR 249 (257)
Q Consensus 219 ~~~~~~~~~~g~~H~~~~~~-~~~~~~~l~~~ 249 (257)
++++.++|..+|...++. .+..++||.+.
T Consensus 291 --~K~l~vyp~~~He~~~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 291 --PKELVVYPEYGHEYGPEFQEDKQLNFLKEH 320 (320)
T ss_dssp --SEEEEEETT--SSTTHHHHHHHHHHHHHH-
T ss_pred --CeeEEeccCcCCCchhhHHHHHHHHHHhcC
Confidence 679999999999999887 78899999863
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.5e-17 Score=129.38 Aligned_cols=187 Identities=15% Similarity=0.126 Sum_probs=112.8
Q ss_pred CCCCCceEEEEEccCCC----CccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025121 29 PKGKHQATIVWLHGLGD----NGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 29 ~~~~~~~~vi~~HG~~~----~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
|.+..++.||++||..+ +...|..+++.|+++||.|+++|+||+|.+... ........+
T Consensus 21 p~~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~-----------------~~~~~~~~~ 83 (274)
T TIGR03100 21 PGASHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGE-----------------NLGFEGIDA 83 (274)
T ss_pred CCCCCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCC-----------------CCCHHHHHH
Confidence 33333456777777543 223356678899888999999999988754311 011222233
Q ss_pred HHHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhh-----------
Q 025121 105 SAAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL----------- 172 (257)
Q Consensus 105 ~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----------- 172 (257)
++..+.+.+.+.. ..++++++|||+||.+++.++.. +.+++++|++++++......
T Consensus 84 d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~------------~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~ 151 (274)
T TIGR03100 84 DIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA------------DLRVAGLVLLNPWVRTEAAQAASRIRHYYLG 151 (274)
T ss_pred HHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh------------CCCccEEEEECCccCCcccchHHHHHHHHHH
Confidence 3334444443332 22479999999999999999763 46899999999875422100
Q ss_pred --------hhc-------------cc-----c--c------------hHHHhhhcCCCEEEEccCCCCcccchh-----h
Q 025121 173 --------RNK-------------IE-----G--S------------HEAARRAASLPILLTHGLCDDVVPYKY-----G 207 (257)
Q Consensus 173 --------~~~-------------~~-----~--~------------~~~~~~~~~~P~l~~~G~~D~~v~~~~-----~ 207 (257)
... +. . . .......+++|+++++|..|...+.-. +
T Consensus 152 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~ 231 (274)
T TIGR03100 152 QLLSADFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQEFADSVLGE 231 (274)
T ss_pred HHhChHHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHHHHHHHhccC
Confidence 000 00 0 0 001223568999999999998864211 1
Q ss_pred HHHHHHhhhcCceeeEEEEecCCCCccCHH-----HHHHHHHHHH
Q 025121 208 EKSANCLSISGFRHLTFKSFEGLGHYTVPK-----EMDEVCNWLT 247 (257)
Q Consensus 208 ~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~-----~~~~~~~~l~ 247 (257)
....+.+... ++++..+++++|.+..+ ..+.+.+||+
T Consensus 232 ~~~~~~l~~~---~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 232 PAWRGALEDP---GIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred hhhHHHhhcC---CeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 3334444322 67999999999988532 3355566653
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.4e-18 Score=123.84 Aligned_cols=217 Identities=18% Similarity=0.191 Sum_probs=149.1
Q ss_pred cCCCCCceEEeCCCC-CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCC-----CC-cccccccCC
Q 025121 17 RTFEFGRTHVVRPKG-KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILG-----GF-PCTAWFDVG 89 (257)
Q Consensus 17 ~~~~~~~~~~~~~~~-~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~-----g~-~~~~w~~~~ 89 (257)
++..+..+++.+... .+.|.||-.||+++....|..+...-. .||.|+.+|.||+|.+..+ +. ..+.|...+
T Consensus 65 ~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~wa~-~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrG 143 (321)
T COG3458 65 GGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLHWAV-AGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRG 143 (321)
T ss_pred CCceEEEEEEeecccCCccceEEEEeeccCCCCCccccccccc-cceeEEEEecccCCCccccCCCCCCCCcCCceeEee
Confidence 556667788777766 788999999999999988877766544 8999999999998766431 21 223343333
Q ss_pred CCCCCCCCchh-hHHHHHHHHHHHhcc-CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCC
Q 025121 90 ELSDDGPEDWE-GLDASAAHIANLLST-EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP 167 (257)
Q Consensus 90 ~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 167 (257)
..+........ -+.+.+.++.-++.- +.+.++|.+.|.|+||.+++..+.. .++++++++..|++.
T Consensus 144 ilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal------------~~rik~~~~~~Pfl~ 211 (321)
T COG3458 144 ILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAAL------------DPRIKAVVADYPFLS 211 (321)
T ss_pred cccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhc------------Chhhhcccccccccc
Confidence 32212221122 234444444333322 2344699999999999999999873 678888888888765
Q ss_pred Cchhhhhccc--------------c-------------chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCce
Q 025121 168 GSRNLRNKIE--------------G-------------SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFR 220 (257)
Q Consensus 168 ~~~~~~~~~~--------------~-------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~ 220 (257)
......+... . .....+..+++|+|+..|-.|.+||+...-..++++..
T Consensus 212 df~r~i~~~~~~~ydei~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~---- 287 (321)
T COG3458 212 DFPRAIELATEGPYDEIQTYFKRHDPKEAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTT---- 287 (321)
T ss_pred cchhheeecccCcHHHHHHHHHhcCchHHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccC----
Confidence 4322221110 0 00113567899999999999999999999999999985
Q ss_pred eeEEEEecCCCCccCHHHHH-HHHHHHHHhc
Q 025121 221 HLTFKSFEGLGHYTVPKEMD-EVCNWLTARL 250 (257)
Q Consensus 221 ~~~~~~~~g~~H~~~~~~~~-~~~~~l~~~l 250 (257)
..++.+++.-+|.-.+...+ ++..|+....
T Consensus 288 ~K~i~iy~~~aHe~~p~~~~~~~~~~l~~l~ 318 (321)
T COG3458 288 SKTIEIYPYFAHEGGPGFQSRQQVHFLKILF 318 (321)
T ss_pred CceEEEeeccccccCcchhHHHHHHHHHhhc
Confidence 56788888888988776654 4888887654
|
|
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.7e-17 Score=120.33 Aligned_cols=189 Identities=20% Similarity=0.189 Sum_probs=132.8
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
...+.++++|-.|+++..|+.+.+.|. ..+.++++++|||+..... ....++.+.++.+..
T Consensus 5 ~~~~~L~cfP~AGGsa~~fr~W~~~lp-~~iel~avqlPGR~~r~~e------------------p~~~di~~Lad~la~ 65 (244)
T COG3208 5 GARLRLFCFPHAGGSASLFRSWSRRLP-ADIELLAVQLPGRGDRFGE------------------PLLTDIESLADELAN 65 (244)
T ss_pred CCCceEEEecCCCCCHHHHHHHHhhCC-chhheeeecCCCcccccCC------------------cccccHHHHHHHHHH
Confidence 456789999999999999999999886 5799999999988643322 124556666777766
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh---h--------hhcc----
Q 025121 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN---L--------RNKI---- 176 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~--------~~~~---- 176 (257)
.+.....+.+++++||||||.+|..+|.+..... - ...+++..++-.|.... + .+.+
T Consensus 66 el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g-------~-~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lg 137 (244)
T COG3208 66 ELLPPLLDAPFALFGHSMGAMLAFEVARRLERAG-------L-PPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLG 137 (244)
T ss_pred HhccccCCCCeeecccchhHHHHHHHHHHHHHcC-------C-CcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhC
Confidence 6663233449999999999999999998752211 1 13344433332221110 0 0000
Q ss_pred ---------------------------ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecC
Q 025121 177 ---------------------------EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEG 229 (257)
Q Consensus 177 ---------------------------~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g 229 (257)
............+|+..+.|++|..+..+....+.+..+. ..++..++|
T Consensus 138 G~p~e~led~El~~l~LPilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~----~f~l~~fdG 213 (244)
T COG3208 138 GTPPELLEDPELMALFLPILRADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKG----DFTLRVFDG 213 (244)
T ss_pred CCChHHhcCHHHHHHHHHHHHHHHHHhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcC----CceEEEecC
Confidence 0000002235689999999999999999888878887764 689999997
Q ss_pred CCCccCHHHHHHHHHHHHHhcCc
Q 025121 230 LGHYTVPKEMDEVCNWLTARLGL 252 (257)
Q Consensus 230 ~~H~~~~~~~~~~~~~l~~~l~~ 252 (257)
||++..+..+.++++|.+.++.
T Consensus 214 -gHFfl~~~~~~v~~~i~~~l~~ 235 (244)
T COG3208 214 -GHFFLNQQREEVLARLEQHLAH 235 (244)
T ss_pred -cceehhhhHHHHHHHHHHHhhh
Confidence 9999999999999999988863
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4e-17 Score=140.98 Aligned_cols=215 Identities=16% Similarity=0.050 Sum_probs=146.8
Q ss_pred ccCCCCCceEEeCCC---CCCceEEEEEccCCCCcc--chHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCC
Q 025121 16 RRTFEFGRTHVVRPK---GKHQATIVWLHGLGDNGS--SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGE 90 (257)
Q Consensus 16 ~~~~~~~~~~~~~~~---~~~~~~vi~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~ 90 (257)
.++..++.++++++. ..+.|+||+.||..+... .|......|..+||.|+.++.||.+ |+ ...|+..+.
T Consensus 424 ~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~-----g~-G~~w~~~g~ 497 (686)
T PRK10115 424 RDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGG-----EL-GQQWYEDGK 497 (686)
T ss_pred CCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCC-----cc-CHHHHHhhh
Confidence 455666666666553 345699999999665553 3666666777799999999988532 11 135554322
Q ss_pred CCCCCCCchhhHHHHHHHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc
Q 025121 91 LSDDGPEDWEGLDASAAHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS 169 (257)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 169 (257)
.. .. ..++.+.++.+..++++. ..++++++.|.|.||+++..++.+. |+.++++|+..|++...
T Consensus 498 ~~-~k---~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~-----------Pdlf~A~v~~vp~~D~~ 562 (686)
T PRK10115 498 FL-KK---KNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQR-----------PELFHGVIAQVPFVDVV 562 (686)
T ss_pred hh-cC---CCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcC-----------hhheeEEEecCCchhHh
Confidence 21 11 234555566666666664 3446999999999999999999853 89999999988875543
Q ss_pred hhhhh-----------c-------------cccchHHHhhhcCCC-EEEEccCCCCcccchhhHHHHHHhhhcCceeeEE
Q 025121 170 RNLRN-----------K-------------IEGSHEAARRAASLP-ILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTF 224 (257)
Q Consensus 170 ~~~~~-----------~-------------~~~~~~~~~~~~~~P-~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 224 (257)
..+.. . ....+......++.| +|+++|.+|..||+.++.+++.+|++.+. +.+.
T Consensus 563 ~~~~~~~~p~~~~~~~e~G~p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~-~~~~ 641 (686)
T PRK10115 563 TTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKT-DDHL 641 (686)
T ss_pred hhcccCCCCCChhHHHHhCCCCCHHHHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCC-CCce
Confidence 22110 0 011222344556778 67779999999999999999999999887 6777
Q ss_pred EEe---cCCCCccC------HHHHHHHHHHHHHhcCc
Q 025121 225 KSF---EGLGHYTV------PKEMDEVCNWLTARLGL 252 (257)
Q Consensus 225 ~~~---~g~~H~~~------~~~~~~~~~~l~~~l~~ 252 (257)
+++ ++.||... .+.......|+...+..
T Consensus 642 vl~~~~~~~GHg~~~~r~~~~~~~A~~~aFl~~~~~~ 678 (686)
T PRK10115 642 LLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLIALAQG 678 (686)
T ss_pred EEEEecCCCCCCCCcCHHHHHHHHHHHHHHHHHHhCC
Confidence 888 89999854 22344566777776654
|
|
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.4e-16 Score=125.19 Aligned_cols=183 Identities=18% Similarity=0.164 Sum_probs=114.1
Q ss_pred CceEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhh
Q 025121 22 GRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEG 101 (257)
Q Consensus 22 ~~~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 101 (257)
+..++.+..+...|+|||+||++.+...|..+++.|+++||.|+++|.++.. + . .......+
T Consensus 40 p~~v~~P~~~g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~-----~---------~----~~~~~i~d 101 (313)
T PLN00021 40 PLLVATPSEAGTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLA-----G---------P----DGTDEIKD 101 (313)
T ss_pred eEEEEeCCCCCCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcC-----C---------C----CchhhHHH
Confidence 3344445455677999999999999999999999999889999999977421 0 0 00111223
Q ss_pred HHHHHHHHHHHhccC------CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh---h
Q 025121 102 LDASAAHIANLLSTE------PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN---L 172 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~------~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~ 172 (257)
..+...++.+.++.. .+.++++++|||+||.+++.++.+.+.. ..+.++++++++.++...... .
T Consensus 102 ~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~------~~~~~v~ali~ldPv~g~~~~~~~~ 175 (313)
T PLN00021 102 AAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAV------SLPLKFSALIGLDPVDGTSKGKQTP 175 (313)
T ss_pred HHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhcccc------ccccceeeEEeeccccccccccCCC
Confidence 333344444322211 2225899999999999999999854210 112468899988875432211 0
Q ss_pred hhccccchHHHhhhcCCCEEEEccCCCC-----ccc----chhh-HHHHHHhhhcCceeeEEEEecCCCCcc
Q 025121 173 RNKIEGSHEAARRAASLPILLTHGLCDD-----VVP----YKYG-EKSANCLSISGFRHLTFKSFEGLGHYT 234 (257)
Q Consensus 173 ~~~~~~~~~~~~~~~~~P~l~~~G~~D~-----~v~----~~~~-~~~~~~l~~~~~~~~~~~~~~g~~H~~ 234 (257)
...+.. ......+.+|++++.+..|. .+| .... .++++..+. +..+.+.+++||.-
T Consensus 176 p~il~~--~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~----~~~~~~~~~~gH~~ 241 (313)
T PLN00021 176 PPVLTY--APHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKA----PAVHFVAKDYGHMD 241 (313)
T ss_pred Cccccc--CcccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCC----CeeeeeecCCCcce
Confidence 111100 01122367999999999763 222 3333 677777764 56788888899953
|
|
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.2e-16 Score=114.45 Aligned_cols=164 Identities=17% Similarity=0.243 Sum_probs=108.7
Q ss_pred EEEEccCCCCcc-chHH-HhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhc
Q 025121 37 IVWLHGLGDNGS-SWSQ-LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLS 114 (257)
Q Consensus 37 vi~~HG~~~~~~-~~~~-~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (257)
|+++||++++.. .|.. +.+.+... ++|-.++.. ...+.++...+.+.+.
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~~----------------------------~P~~~~W~~~l~~~i~ 51 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDWD----------------------------NPDLDEWVQALDQAID 51 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--T----------------------------S--HHHHHHHHHHCCH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEeccccC----------------------------CCCHHHHHHHHHHHHh
Confidence 689999988765 4655 55666644 777766521 3355777778777776
Q ss_pred cCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCC-chhhhhccccchHHHhhhcCCCEEE
Q 025121 115 TEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPG-SRNLRNKIEGSHEAARRAASLPILL 193 (257)
Q Consensus 115 ~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~P~l~ 193 (257)
.. +.+++|||||+|+..++.++.. ....+++++++++|+.+. .....................|.++
T Consensus 52 ~~--~~~~ilVaHSLGc~~~l~~l~~----------~~~~~v~g~lLVAp~~~~~~~~~~~~~~~f~~~p~~~l~~~~~v 119 (171)
T PF06821_consen 52 AI--DEPTILVAHSLGCLTALRWLAE----------QSQKKVAGALLVAPFDPDDPEPFPPELDGFTPLPRDPLPFPSIV 119 (171)
T ss_dssp C---TTTEEEEEETHHHHHHHHHHHH----------TCCSSEEEEEEES--SCGCHHCCTCGGCCCTTSHCCHHHCCEEE
T ss_pred hc--CCCeEEEEeCHHHHHHHHHHhh----------cccccccEEEEEcCCCcccccchhhhccccccCcccccCCCeEE
Confidence 53 3379999999999999999942 347899999999998763 2222222222222233445677899
Q ss_pred EccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHH---HHHHHHHHH
Q 025121 194 THGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKE---MDEVCNWLT 247 (257)
Q Consensus 194 ~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~---~~~~~~~l~ 247 (257)
+.+++|+++|++.++++++++ +.+++.++++||+...+. +..+.+.|+
T Consensus 120 iaS~nDp~vp~~~a~~~A~~l------~a~~~~~~~~GHf~~~~G~~~~p~~~~~l~ 170 (171)
T PF06821_consen 120 IASDNDPYVPFERAQRLAQRL------GAELIILGGGGHFNAASGFGPWPEGLDLLQ 170 (171)
T ss_dssp EEETTBSSS-HHHHHHHHHHH------T-EEEEETS-TTSSGGGTHSS-HHHHHHHH
T ss_pred EEcCCCCccCHHHHHHHHHHc------CCCeEECCCCCCcccccCCCchHHHHHHhc
Confidence 999999999999999999999 468999999999987543 455555554
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.7e-16 Score=124.27 Aligned_cols=207 Identities=14% Similarity=0.037 Sum_probs=132.8
Q ss_pred CCceEEEEEccCCCCcc-------------chHHHh---hcCCCCceEEEccCCCCCCcccCC--CCcccccccC-CCCC
Q 025121 32 KHQATIVWLHGLGDNGS-------------SWSQLL---ESLPLPNIKWICPTAPTRPVAILG--GFPCTAWFDV-GELS 92 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~-------------~~~~~~---~~l~~~g~~v~~~d~~~~g~~~~~--g~~~~~w~~~-~~~~ 92 (257)
...++||+.|+++++.. .|..++ +.|.-..|-||++|..|.+.+.++ |...+.-... .+..
T Consensus 54 ~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~ 133 (389)
T PRK06765 54 AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKP 133 (389)
T ss_pred CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCc
Confidence 34579999999988542 155443 345567899999999876653332 1111100000 0111
Q ss_pred CCCCCchhhHHHHHHHHHHHhccCCCCceEE-EEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-
Q 025121 93 DDGPEDWEGLDASAAHIANLLSTEPADVKVG-IGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR- 170 (257)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~- 170 (257)
....-...++.+.++++..++++.... ++. ++||||||.+++.++.++ |++++.+|++++......
T Consensus 134 ~~~~fP~~t~~d~~~~~~~ll~~lgi~-~~~~vvG~SmGG~ial~~a~~~-----------P~~v~~lv~ia~~~~~~~~ 201 (389)
T PRK06765 134 YGMDFPVVTILDFVRVQKELIKSLGIA-RLHAVMGPSMGGMQAQEWAVHY-----------PHMVERMIGVIGNPQNDAW 201 (389)
T ss_pred cCCCCCcCcHHHHHHHHHHHHHHcCCC-CceEEEEECHHHHHHHHHHHHC-----------hHhhheEEEEecCCCCChh
Confidence 111223457788888888888766554 765 999999999999999964 888888887754211000
Q ss_pred -------------------------------------------------hhhhcccc-----------------------
Q 025121 171 -------------------------------------------------NLRNKIEG----------------------- 178 (257)
Q Consensus 171 -------------------------------------------------~~~~~~~~----------------------- 178 (257)
.+......
T Consensus 202 ~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl~ 281 (389)
T PRK06765 202 TSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEIN 281 (389)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHHHH
Confidence 00000000
Q ss_pred --------------------------------chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEE
Q 025121 179 --------------------------------SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKS 226 (257)
Q Consensus 179 --------------------------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~ 226 (257)
........+++|+++++|+.|.++|++.++.+.+.++..+. ++++++
T Consensus 282 ~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~-~a~l~~ 360 (389)
T PRK06765 282 KATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGK-YAEVYE 360 (389)
T ss_pred HHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCC-CeEEEE
Confidence 00012235689999999999999999999999999975433 679999
Q ss_pred ecC-CCCccCHHHHHHHHHHHHHhcC
Q 025121 227 FEG-LGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 227 ~~g-~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
+++ .||....+..+.+.+.|.+++.
T Consensus 361 I~s~~GH~~~le~p~~~~~~I~~FL~ 386 (389)
T PRK06765 361 IESINGHMAGVFDIHLFEKKIYEFLN 386 (389)
T ss_pred ECCCCCcchhhcCHHHHHHHHHHHHc
Confidence 985 8999886666666666665554
|
|
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.2e-17 Score=128.90 Aligned_cols=198 Identities=20% Similarity=0.236 Sum_probs=120.0
Q ss_pred CCCCceEEeCCCCCCceEEEEEccCCCCccchHHH-hhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCC
Q 025121 19 FEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQL-LESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPE 97 (257)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~-~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~ 97 (257)
..++..+..++.+++.|+||++-|..+...++..+ .+.|+..|+.++++|.||.|.+. .|. . ..
T Consensus 175 ~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~-------~~~-l-------~~ 239 (411)
T PF06500_consen 175 KTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESP-------KWP-L-------TQ 239 (411)
T ss_dssp CEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGT-------TT--S--------S
T ss_pred cEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccc-------cCC-C-------Cc
Confidence 44445566677778889999999999999886655 46787899999999999876542 110 0 01
Q ss_pred chhhHHHHHHHHHHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh----
Q 025121 98 DWEGLDASAAHIANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN---- 171 (257)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---- 171 (257)
+. ......+.+++... .+..+|+++|.|+||++|.++|... +++++++|++++.+...-.
T Consensus 240 D~---~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le-----------~~RlkavV~~Ga~vh~~ft~~~~ 305 (411)
T PF06500_consen 240 DS---SRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALE-----------DPRLKAVVALGAPVHHFFTDPEW 305 (411)
T ss_dssp -C---CHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHT-----------TTT-SEEEEES---SCGGH-HHH
T ss_pred CH---HHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhc-----------ccceeeEeeeCchHhhhhccHHH
Confidence 11 22334455555443 3346999999999999999998743 7899999999885321100
Q ss_pred -----------hhhcc--------------c---cchHHH--hhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCcee
Q 025121 172 -----------LRNKI--------------E---GSHEAA--RRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRH 221 (257)
Q Consensus 172 -----------~~~~~--------------~---~~~~~~--~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~ 221 (257)
+...+ . -..+-. ...+.+|+|.+.|++|.++|.+..+.++..-. +
T Consensus 306 ~~~~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~-----~ 380 (411)
T PF06500_consen 306 QQRVPDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESST-----D 380 (411)
T ss_dssp HTTS-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBT-----T
T ss_pred HhcCCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCC-----C
Confidence 00000 0 000001 25678999999999999999988776665544 3
Q ss_pred eEEEEecCCC-CccCHHHHHHHHHHHHHhc
Q 025121 222 LTFKSFEGLG-HYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 222 ~~~~~~~g~~-H~~~~~~~~~~~~~l~~~l 250 (257)
-+...++... |.-.++.+..+.+||.+.|
T Consensus 381 gk~~~~~~~~~~~gy~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 381 GKALRIPSKPLHMGYPQALDEIYKWLEDKL 410 (411)
T ss_dssp -EEEEE-SSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CceeecCCCccccchHHHHHHHHHHHHHhc
Confidence 4566666434 7767888999999998865
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.1e-16 Score=112.62 Aligned_cols=199 Identities=24% Similarity=0.319 Sum_probs=134.3
Q ss_pred CceEEEEEccCCCCccchHH----HhhcCCCCceEEEccCCCCC----CcccCCC----------Cc-ccccccCCCCCC
Q 025121 33 HQATIVWLHGLGDNGSSWSQ----LLESLPLPNIKWICPTAPTR----PVAILGG----------FP-CTAWFDVGELSD 93 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~----~~~~l~~~g~~v~~~d~~~~----g~~~~~g----------~~-~~~w~~~~~~~~ 93 (257)
.++-||++||+..+...+.. +.+.+. .-+..+.+|.|-. +.....+ .. ...||.....
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~-k~~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~-- 80 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLK-KLAELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEA-- 80 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHH-hhheEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccc--
Confidence 45689999999999887754 334443 3378888887731 1111111 11 2556655432
Q ss_pred CCCCchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh
Q 025121 94 DGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR 173 (257)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 173 (257)
.......++....++.+++.+..+ ==+|+|+|+|+.++..++....... ...-.+.++-+|++||+.+......
T Consensus 81 -~~~~~~~~eesl~yl~~~i~enGP--FDGllGFSQGA~laa~l~~~~~~~~---~~~~~P~~kF~v~~SGf~~~~~~~~ 154 (230)
T KOG2551|consen 81 -SFTEYFGFEESLEYLEDYIKENGP--FDGLLGFSQGAALAALLAGLGQKGL---PYVKQPPFKFAVFISGFKFPSKKLD 154 (230)
T ss_pred -ccccccChHHHHHHHHHHHHHhCC--CccccccchhHHHHHHhhcccccCC---cccCCCCeEEEEEEecCCCCcchhh
Confidence 223345567778888888877543 1279999999999999988221110 0111346899999999987643222
Q ss_pred hccccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC--HHHHHHHHHHHHHhcC
Q 025121 174 NKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV--PKEMDEVCNWLTARLG 251 (257)
Q Consensus 174 ~~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~~~l~ 251 (257)
.. .....+++|.|.+.|+.|.++|...+..|++.++ +..++.-|| ||.+. ....+.+.+||++.+.
T Consensus 155 ~~------~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~-----~a~vl~Hpg-gH~VP~~~~~~~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 155 ES------AYKRPLSTPSLHIFGETDTIVPSERSEQLAESFK-----DATVLEHPG-GHIVPNKAKYKEKIADFIQSFLQ 222 (230)
T ss_pred hh------hhccCCCCCeeEEecccceeecchHHHHHHHhcC-----CCeEEecCC-CccCCCchHHHHHHHHHHHHHHH
Confidence 21 2234679999999999999999999999999998 445666665 99987 4456889999988765
Q ss_pred c
Q 025121 252 L 252 (257)
Q Consensus 252 ~ 252 (257)
.
T Consensus 223 ~ 223 (230)
T KOG2551|consen 223 E 223 (230)
T ss_pred h
Confidence 3
|
|
| >KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.9e-17 Score=118.07 Aligned_cols=189 Identities=15% Similarity=0.138 Sum_probs=135.4
Q ss_pred CCCceEEEEEccCCCCccchHHHhhcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 31 GKHQATIVWLHGLGDNGSSWSQLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~~~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
....|+++++|+..++.......++.+- .-+.+|+.+++||- +.+.|. ..++.+.-+.+.+
T Consensus 75 E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGY--G~S~Gs----------------psE~GL~lDs~av 136 (300)
T KOG4391|consen 75 ESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGY--GKSEGS----------------PSEEGLKLDSEAV 136 (300)
T ss_pred cCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeecc--ccCCCC----------------ccccceeccHHHH
Confidence 3478999999999999887766555442 45799999997643 333332 1233444455666
Q ss_pred HHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc-----------
Q 025121 110 ANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI----------- 176 (257)
Q Consensus 110 ~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------- 176 (257)
.+.+... ....+++|.|-|+||.+|+.+|+ ++.+++.++|.-..++..+.......
T Consensus 137 ldyl~t~~~~dktkivlfGrSlGGAvai~las-----------k~~~ri~~~ivENTF~SIp~~~i~~v~p~~~k~i~~l 205 (300)
T KOG4391|consen 137 LDYLMTRPDLDKTKIVLFGRSLGGAVAIHLAS-----------KNSDRISAIIVENTFLSIPHMAIPLVFPFPMKYIPLL 205 (300)
T ss_pred HHHHhcCccCCcceEEEEecccCCeeEEEeec-----------cchhheeeeeeechhccchhhhhheeccchhhHHHHH
Confidence 6666543 23359999999999999999998 45778999887666654422211111
Q ss_pred ----ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC---HHHHHHHHHHHHHh
Q 025121 177 ----EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV---PKEMDEVCNWLTAR 249 (257)
Q Consensus 177 ----~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~---~~~~~~~~~~l~~~ 249 (257)
.............|.|++.|.+|++||+-..+++++..... ..++.+||++.|.-. ...++.+.+||.+.
T Consensus 206 c~kn~~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~---~Krl~eFP~gtHNDT~i~dGYfq~i~dFlaE~ 282 (300)
T KOG4391|consen 206 CYKNKWLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSR---TKRLAEFPDGTHNDTWICDGYFQAIEDFLAEV 282 (300)
T ss_pred HHHhhhcchhhhccccCceEEeecCccccCCcHHHHHHHHhCchh---hhhheeCCCCccCceEEeccHHHHHHHHHHHh
Confidence 01112233467899999999999999999999999999876 679999999999754 55789999999886
Q ss_pred cC
Q 025121 250 LG 251 (257)
Q Consensus 250 l~ 251 (257)
..
T Consensus 283 ~~ 284 (300)
T KOG4391|consen 283 VK 284 (300)
T ss_pred cc
Confidence 54
|
|
| >KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.8e-16 Score=113.84 Aligned_cols=194 Identities=18% Similarity=0.183 Sum_probs=131.5
Q ss_pred eEEeCCCCCCceEEEEEcc-CCCCccchHHHhhcCCCCceEEEccCCC-CCCcccC-CCCcccccccCCCCCCCCCCchh
Q 025121 24 THVVRPKGKHQATIVWLHG-LGDNGSSWSQLLESLPLPNIKWICPTAP-TRPVAIL-GGFPCTAWFDVGELSDDGPEDWE 100 (257)
Q Consensus 24 ~~~~~~~~~~~~~vi~~HG-~~~~~~~~~~~~~~l~~~g~~v~~~d~~-~~g~~~~-~g~~~~~w~~~~~~~~~~~~~~~ 100 (257)
.|+.-...+++ .||.+-. +|-...+-+..+..++.+||.|++||+- |-+.+.. +-.....|+... +.+
T Consensus 30 aYv~gs~~~~~-~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~--------~~~ 100 (242)
T KOG3043|consen 30 AYVVGSTSSKK-VLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGH--------SPP 100 (242)
T ss_pred EEEecCCCCCe-EEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcC--------Ccc
Confidence 44444444444 5555555 5555555788999999999999999953 2111111 111123343321 122
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccch
Q 025121 101 GLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSH 180 (257)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 180 (257)
.....+..+.++++......+|.++|++|||.++..+... .+ .+.+++++.|-+....
T Consensus 101 ~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~-----------~~-~f~a~v~~hps~~d~~---------- 158 (242)
T KOG3043|consen 101 KIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAK-----------DP-EFDAGVSFHPSFVDSA---------- 158 (242)
T ss_pred cchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeecc-----------ch-hheeeeEecCCcCChh----------
Confidence 2344456666666666656699999999999999988873 23 7777777766443322
Q ss_pred HHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC---------------HHHHHHHHHH
Q 025121 181 EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV---------------PKEMDEVCNW 245 (257)
Q Consensus 181 ~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~---------------~~~~~~~~~~ 245 (257)
.....++|++++.|+.|+.+|++....+.+.+++......++.+|+|.+|.+. .+.+.++..|
T Consensus 159 --D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~W 236 (242)
T KOG3043|consen 159 --DIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISW 236 (242)
T ss_pred --HHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHH
Confidence 23455799999999999999999999999999876432357999999999876 2346788889
Q ss_pred HHHhc
Q 025121 246 LTARL 250 (257)
Q Consensus 246 l~~~l 250 (257)
+.+.+
T Consensus 237 f~~y~ 241 (242)
T KOG3043|consen 237 FKHYL 241 (242)
T ss_pred HHHhh
Confidence 88765
|
|
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.6e-17 Score=131.17 Aligned_cols=61 Identities=16% Similarity=0.166 Sum_probs=48.6
Q ss_pred CCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCc--c-C----HHHHHHHHHHHHHhcCc
Q 025121 188 SLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHY--T-V----PKEMDEVCNWLTARLGL 252 (257)
Q Consensus 188 ~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~--~-~----~~~~~~~~~~l~~~l~~ 252 (257)
++|+++++|++|.+++++.++.+.+.++. ..+++.+++.+|. + . .+..+.+++||.+..+.
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~----~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~~ 392 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELPS----KPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLGKS 392 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCCC----ccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhhhc
Confidence 57999999999999999999999998873 2478889999995 2 2 33467888898875543
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.6e-17 Score=122.95 Aligned_cols=183 Identities=24% Similarity=0.337 Sum_probs=101.8
Q ss_pred CceEEEEEccCCCCccchHHHhhcCC---CC-ceEEEccCCCCCC-----cc---------cCCCCcccccccCCCCCCC
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLP---LP-NIKWICPTAPTRP-----VA---------ILGGFPCTAWFDVGELSDD 94 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~---~~-g~~v~~~d~~~~g-----~~---------~~~g~~~~~w~~~~~~~~~ 94 (257)
.++.||++||++++...++.....|. .. ++..+.+|.|..- .. ........+||.....
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~--- 79 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDD--- 79 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S----
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCC---
Confidence 46789999999999998876554443 23 7999999977542 11 1112344567665322
Q ss_pred CCCchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhh
Q 025121 95 GPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN 174 (257)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 174 (257)
......+.+.++.+.+.+++... -.+|+|+|+||.+|..++........ ......++.+|+++++.+.......
T Consensus 80 -~~~~~~~~~sl~~l~~~i~~~GP--fdGvlGFSQGA~lAa~ll~~~~~~~~---~~~~~~~kf~V~~sg~~p~~~~~~~ 153 (212)
T PF03959_consen 80 -DHEYEGLDESLDYLRDYIEENGP--FDGVLGFSQGAALAALLLALQQRGRP---DGAHPPFKFAVFISGFPPPDPDYQE 153 (212)
T ss_dssp -SGGG---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST-----T----SEEEEES----EEE-GTT
T ss_pred -cccccCHHHHHHHHHHHHHhcCC--eEEEEeecHHHHHHHHHHHHHHhhcc---cccCCCceEEEEEcccCCCchhhhh
Confidence 33466778888888888877542 35899999999999999875321110 0024568899999999886544333
Q ss_pred ccccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC
Q 025121 175 KIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV 235 (257)
Q Consensus 175 ~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 235 (257)
.+ ....+++|+|.++|++|.+++.+.++.+.+.+.. ..+++..+| ||.+.
T Consensus 154 ~~------~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~----~~~v~~h~g-GH~vP 203 (212)
T PF03959_consen 154 LY------DEPKISIPTLHVIGENDPVVPPERSEALAEMFDP----DARVIEHDG-GHHVP 203 (212)
T ss_dssp TT--------TT---EEEEEEETT-SSS-HHHHHHHHHHHHH----HEEEEEESS-SSS--
T ss_pred hh------ccccCCCCeEEEEeCCCCCcchHHHHHHHHhccC----CcEEEEECC-CCcCc
Confidence 22 2346699999999999999999999999999983 167888885 99876
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.3e-15 Score=116.72 Aligned_cols=172 Identities=12% Similarity=0.068 Sum_probs=111.5
Q ss_pred CCCCceEEEEEccCCCCcc----chHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025121 30 KGKHQATIVWLHGLGDNGS----SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 30 ~~~~~~~vi~~HG~~~~~~----~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
..+++++|||+||++++.. .|..+++.|++.||.|+.+|+||+|.+.... .........++
T Consensus 21 ~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~---------------~~~~~~~~~~D 85 (266)
T TIGR03101 21 AVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDF---------------AAARWDVWKED 85 (266)
T ss_pred CCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcc---------------ccCCHHHHHHH
Confidence 3455789999999987544 3556788888889999999999876542110 01123334444
Q ss_pred HHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc---------
Q 025121 106 AAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI--------- 176 (257)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--------- 176 (257)
+..+.+++++.. ..+++|+||||||.+++.++.+. +..++++|++++.......+.+.+
T Consensus 86 v~~ai~~L~~~~-~~~v~LvG~SmGG~vAl~~A~~~-----------p~~v~~lVL~~P~~~g~~~l~~~lrl~~~~~~~ 153 (266)
T TIGR03101 86 VAAAYRWLIEQG-HPPVTLWGLRLGALLALDAANPL-----------AAKCNRLVLWQPVVSGKQQLQQFLRLRLVARRL 153 (266)
T ss_pred HHHHHHHHHhcC-CCCEEEEEECHHHHHHHHHHHhC-----------ccccceEEEeccccchHHHHHHHHHHHHHHHhc
Confidence 445555565543 34999999999999999998853 788999999988654332222210
Q ss_pred ccc--------------------------hH-----HHhhh-----cCCCEEEEccCC--CCcccchhhHHHHHHhhhcC
Q 025121 177 EGS--------------------------HE-----AARRA-----ASLPILLTHGLC--DDVVPYKYGEKSANCLSISG 218 (257)
Q Consensus 177 ~~~--------------------------~~-----~~~~~-----~~~P~l~~~G~~--D~~v~~~~~~~~~~~l~~~~ 218 (257)
... +. ...+. ...+++++.-.. |.- .......+.+++++.|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g 232 (266)
T TIGR03101 154 GGESAEASNSLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVPKNCPVHWFEVRPEEGAT-LSPVFSRLGEQWVQSG 232 (266)
T ss_pred cccccccchhHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCCCCCceEEEEeccccCCC-CCHHHHHHHHHHHHcC
Confidence 000 00 00111 144677776532 322 2335578999999999
Q ss_pred ceeeEEEEecCC
Q 025121 219 FRHLTFKSFEGL 230 (257)
Q Consensus 219 ~~~~~~~~~~g~ 230 (257)
+ .++...++|.
T Consensus 233 ~-~v~~~~~~~~ 243 (266)
T TIGR03101 233 V-EVTVDLVPGP 243 (266)
T ss_pred C-eEeeeecCCc
Confidence 8 8999999986
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >KOG2984 consensus Predicted hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.1e-16 Score=111.53 Aligned_cols=190 Identities=14% Similarity=0.027 Sum_probs=128.6
Q ss_pred eCCCCCCceEEEEEccC-CCCccchHHHhhcCCCC-ceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025121 27 VRPKGKHQATIVWLHGL-GDNGSSWSQLLESLPLP-NIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 27 ~~~~~~~~~~vi~~HG~-~~~~~~~~~~~~~l~~~-g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
|-..+.....|+++.|. |+...+|.+....+... .+.+++.|.||-|.+..+. .....+.+..
T Consensus 35 y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~---------------Rkf~~~ff~~ 99 (277)
T KOG2984|consen 35 YCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPE---------------RKFEVQFFMK 99 (277)
T ss_pred eeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCc---------------ccchHHHHHH
Confidence 33445555689999996 55566898877777643 4999999999755443322 1223455666
Q ss_pred HHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch----------hhhh
Q 025121 105 SAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR----------NLRN 174 (257)
Q Consensus 105 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----------~~~~ 174 (257)
++++..++++..... ++.|+|+|-||..|+..|++. ++.+..++.+++....+. ....
T Consensus 100 Da~~avdLM~aLk~~-~fsvlGWSdGgiTalivAak~-----------~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~k 167 (277)
T KOG2984|consen 100 DAEYAVDLMEALKLE-PFSVLGWSDGGITALIVAAKG-----------KEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNK 167 (277)
T ss_pred hHHHHHHHHHHhCCC-CeeEeeecCCCeEEEEeeccC-----------hhhhhhheeecccceecchhHHHHhchHHHhh
Confidence 677777777665444 999999999999999999954 777877777755311110 0000
Q ss_pred cc-----------------------------------ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCc
Q 025121 175 KI-----------------------------------EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGF 219 (257)
Q Consensus 175 ~~-----------------------------------~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~ 219 (257)
+. .+........+++|++|+||+.|++++...+--+....+
T Consensus 168 Ws~r~R~P~e~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~---- 243 (277)
T KOG2984|consen 168 WSARGRQPYEDHYGPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKS---- 243 (277)
T ss_pred hhhhhcchHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcc----
Confidence 00 001112445679999999999999999888776666665
Q ss_pred eeeEEEEecCCCCccC----HHHHHHHHHHHHH
Q 025121 220 RHLTFKSFEGLGHYTV----PKEMDEVCNWLTA 248 (257)
Q Consensus 220 ~~~~~~~~~g~~H~~~----~~~~~~~~~~l~~ 248 (257)
..++.++|.++|.++ .+.-+.+.+|+++
T Consensus 244 -~a~~~~~peGkHn~hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 244 -LAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred -cceEEEccCCCcceeeechHHHHHHHHHHHhc
Confidence 568999999999987 3444566777654
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.8e-16 Score=125.95 Aligned_cols=183 Identities=15% Similarity=0.101 Sum_probs=117.6
Q ss_pred CceEEEEEccCCCCccc-----hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhH-HHHH
Q 025121 33 HQATIVWLHGLGDNGSS-----WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGL-DASA 106 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~-----~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~-~~~~ 106 (257)
.+++||++||...+... +..+++.|.++||.|+++|+++++.+.. .....++ .+.+
T Consensus 61 ~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~------------------~~~~~d~~~~~~ 122 (350)
T TIGR01836 61 HKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADR------------------YLTLDDYINGYI 122 (350)
T ss_pred CCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHh------------------cCCHHHHHHHHH
Confidence 35579999997654433 3578999988999999999876432110 0112222 1223
Q ss_pred HHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh---------------
Q 025121 107 AHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN--------------- 171 (257)
Q Consensus 107 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--------------- 171 (257)
..+.+.+.+.....++.++||||||.+++.++... ++++++++++++.+.....
T Consensus 123 ~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~-----------~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~ 191 (350)
T TIGR01836 123 DKCVDYICRTSKLDQISLLGICQGGTFSLCYAALY-----------PDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDL 191 (350)
T ss_pred HHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhC-----------chheeeEEEeccccccCCCCchhhhhccccCHHH
Confidence 33333333333334999999999999999998853 6677777777654321100
Q ss_pred -------------------------hh-----------------------hcccc---ch--------------------
Q 025121 172 -------------------------LR-----------------------NKIEG---SH-------------------- 180 (257)
Q Consensus 172 -------------------------~~-----------------------~~~~~---~~-------------------- 180 (257)
.. .+... ..
T Consensus 192 ~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g 271 (350)
T TIGR01836 192 AVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLING 271 (350)
T ss_pred HHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCC
Confidence 00 00000 00
Q ss_pred -------HHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC-------HHHHHHHHHHH
Q 025121 181 -------EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-------PKEMDEVCNWL 246 (257)
Q Consensus 181 -------~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-------~~~~~~~~~~l 246 (257)
......+++|+++++|++|.++|++.++.+.+.+... +++++++++ ||... .+.+..+.+||
T Consensus 272 ~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~---~~~~~~~~~-gH~~~~~~~~~~~~v~~~i~~wl 347 (350)
T TIGR01836 272 EVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSE---DYTELSFPG-GHIGIYVSGKAQKEVPPAIGKWL 347 (350)
T ss_pred eeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCC---CeEEEEcCC-CCEEEEECchhHhhhhHHHHHHH
Confidence 0013346899999999999999999999999988753 568888885 77643 34567888888
Q ss_pred HH
Q 025121 247 TA 248 (257)
Q Consensus 247 ~~ 248 (257)
.+
T Consensus 348 ~~ 349 (350)
T TIGR01836 348 QA 349 (350)
T ss_pred Hh
Confidence 65
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.6e-15 Score=115.80 Aligned_cols=187 Identities=14% Similarity=0.143 Sum_probs=123.7
Q ss_pred CCCCceEEEEEccCCCCccchHHHhhcCCC-CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025121 30 KGKHQATIVWLHGLGDNGSSWSQLLESLPL-PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 30 ~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~-~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
.....|+++++||+-+++.+|+.+.+.|+. -+..++++|.|.||.+..-. ..+. ..++.+
T Consensus 48 ~~~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~----------------~h~~---~~ma~d 108 (315)
T KOG2382|consen 48 NLERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT----------------VHNY---EAMAED 108 (315)
T ss_pred ccCCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccc----------------ccCH---HHHHHH
Confidence 335778999999999999999999999983 57899999999887654321 1123 344444
Q ss_pred HHHHhccCC---CCceEEEEEechhH-HHHHHHHHhccccCCCCCCCcccccceEEEe--cc-CCC--------------
Q 025121 109 IANLLSTEP---ADVKVGIGGFSMGA-AVALYSATCCALGRYGNGIPYYVNLRAVVGL--SG-WLP-------------- 167 (257)
Q Consensus 109 ~~~~~~~~~---~~~~i~l~G~S~Gg-~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~-~~~-------------- 167 (257)
+..+++... ...++.++|||||| .+++..+. ..|..+..+|.. +| .++
T Consensus 109 v~~Fi~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~-----------~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~ 177 (315)
T KOG2382|consen 109 VKLFIDGVGGSTRLDPVVLLGHSMGGVKVAMAETL-----------KKPDLIERLIVEDISPGGVGRSYGEYRELIKAMI 177 (315)
T ss_pred HHHHHHHcccccccCCceecccCcchHHHHHHHHH-----------hcCcccceeEEEecCCccCCcccchHHHHHHHHH
Confidence 444444432 23499999999999 44444443 335555555543 22 100
Q ss_pred ---Cc--------------------h----hhhhccc----------------------c------chHHHhhhcCCCEE
Q 025121 168 ---GS--------------------R----NLRNKIE----------------------G------SHEAARRAASLPIL 192 (257)
Q Consensus 168 ---~~--------------------~----~~~~~~~----------------------~------~~~~~~~~~~~P~l 192 (257)
.. . .+...+. . ...........||+
T Consensus 178 ~~d~~~~~~~~rke~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvl 257 (315)
T KOG2382|consen 178 QLDLSIGVSRGRKEALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVL 257 (315)
T ss_pred hccccccccccHHHHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhccccccccccccccee
Confidence 00 0 0000000 0 00001134578999
Q ss_pred EEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 193 LTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 193 ~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
+++|.++.+++.+.-.++.+.++ .+++++++++||+++.|.++.+.+-|.+++.
T Consensus 258 fi~g~~S~fv~~~~~~~~~~~fp-----~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~ 311 (315)
T KOG2382|consen 258 FIKGLQSKFVPDEHYPRMEKIFP-----NVEVHELDEAGHWVHLEKPEEFIESISEFLE 311 (315)
T ss_pred EEecCCCCCcChhHHHHHHHhcc-----chheeecccCCceeecCCHHHHHHHHHHHhc
Confidence 99999999999998888888887 6899999999999997777777666666544
|
|
| >KOG4667 consensus Predicted esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.4e-15 Score=108.50 Aligned_cols=167 Identities=17% Similarity=0.204 Sum_probs=112.6
Q ss_pred ceEEEEEccCCCCccc--hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 34 QATIVWLHGLGDNGSS--WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
..+||++||+-+++.. ...++..|++.|+.++.+|++|.|.+-.. |+.+.. ... ++++..
T Consensus 33 ~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gs-------f~~Gn~--------~~e---adDL~s 94 (269)
T KOG4667|consen 33 TEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGS-------FYYGNY--------NTE---ADDLHS 94 (269)
T ss_pred ceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCc-------cccCcc--------cch---HHHHHH
Confidence 4589999999998876 45588888889999999998877654321 222211 111 233333
Q ss_pred HhccCCCCce--EEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc-------------
Q 025121 112 LLSTEPADVK--VGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI------------- 176 (257)
Q Consensus 112 ~~~~~~~~~~--i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~------------- 176 (257)
.++.....++ -+++|||-||-+++.++... .+ +.-+|-++|-+.....+.+.+
T Consensus 95 V~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~-----------~d-~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gf 162 (269)
T KOG4667|consen 95 VIQYFSNSNRVVPVILGHSKGGDVVLLYASKY-----------HD-IRNVINCSGRYDLKNGINERLGEDYLERIKEQGF 162 (269)
T ss_pred HHHHhccCceEEEEEEeecCccHHHHHHHHhh-----------cC-chheEEcccccchhcchhhhhcccHHHHHHhCCc
Confidence 3333322223 36899999999999999953 33 555666666544333222111
Q ss_pred -----------------------ccch--HHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCC
Q 025121 177 -----------------------EGSH--EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLG 231 (257)
Q Consensus 177 -----------------------~~~~--~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~ 231 (257)
.... ....-..+||||-+||..|.+||.+.+.++++.++ +.++.+++|++
T Consensus 163 id~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~-----nH~L~iIEgAD 237 (269)
T KOG4667|consen 163 IDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIP-----NHKLEIIEGAD 237 (269)
T ss_pred eecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhcc-----CCceEEecCCC
Confidence 0000 00112357999999999999999999999999998 55899999999
Q ss_pred CccC
Q 025121 232 HYTV 235 (257)
Q Consensus 232 H~~~ 235 (257)
|.+.
T Consensus 238 Hnyt 241 (269)
T KOG4667|consen 238 HNYT 241 (269)
T ss_pred cCcc
Confidence 9886
|
|
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.7e-15 Score=108.70 Aligned_cols=164 Identities=21% Similarity=0.217 Sum_probs=102.4
Q ss_pred CceEEEEEccCCCCccchHHHh--hcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLL--ESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~--~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
+.|+||++||.+++...+.... ..++ +.||.|+.|+.... .....+..|+.. .......+...+..+++.+
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~----~~~~~cw~w~~~--~~~~g~~d~~~i~~lv~~v 88 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRR----ANPQGCWNWFSD--DQQRGGGDVAFIAALVDYV 88 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEccccccc----CCCCCccccccc--ccccCccchhhHHHHHHhH
Confidence 5699999999999988765421 2233 57999999985422 122344566551 1111122233333333333
Q ss_pred HHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc--------hhhhhccccch
Q 025121 110 ANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--------RNLRNKIEGSH 180 (257)
Q Consensus 110 ~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------~~~~~~~~~~~ 180 (257)
..+. .+..||++.|+|.||.++..++. .+|+.|+++..++|..... ..+.......+
T Consensus 89 ---~~~~~iD~~RVyv~G~S~Gg~ma~~la~-----------~~pd~faa~a~~sG~~~~~a~~~~~a~~~m~~g~~~~p 154 (220)
T PF10503_consen 89 ---AARYNIDPSRVYVTGLSNGGMMANVLAC-----------AYPDLFAAVAVVSGVPYGCAASGASALSAMRSGPRPAP 154 (220)
T ss_pred ---hhhcccCCCceeeEEECHHHHHHHHHHH-----------hCCccceEEEeecccccccccCcccHHHHhhCCCCCCh
Confidence 3332 34569999999999999999998 4599999998887753211 00000000001
Q ss_pred HH-------HhhhcCCCEEEEccCCCCcccchhhHHHHHHhhh
Q 025121 181 EA-------ARRAASLPILLTHGLCDDVVPYKYGEKSANCLSI 216 (257)
Q Consensus 181 ~~-------~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~ 216 (257)
.. .......|++++||+.|.+|.+....++.+....
T Consensus 155 ~~~~~a~~~~g~~~~~P~~v~hG~~D~tV~~~n~~~~~~q~~~ 197 (220)
T PF10503_consen 155 AAAWGARSDAGAYPGYPRIVFHGTADTTVNPQNADQLVAQWLN 197 (220)
T ss_pred HHHHHhhhhccCCCCCCEEEEecCCCCccCcchHHHHHHHHHH
Confidence 00 0012347999999999999999988888887764
|
|
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.2e-14 Score=105.32 Aligned_cols=158 Identities=22% Similarity=0.274 Sum_probs=103.1
Q ss_pred EEEEccCCCCccchHH--HhhcCCC--CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 37 IVWLHGLGDNGSSWSQ--LLESLPL--PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 37 vi~~HG~~~~~~~~~~--~~~~l~~--~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
||++||+.++...... +.+.++. ....+.++++|. .....+..+.++
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~-----------------------------~p~~a~~~l~~~ 52 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPP-----------------------------FPEEAIAQLEQL 52 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCc-----------------------------CHHHHHHHHHHH
Confidence 7999999998877543 3444442 346777777652 114446666777
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccc------------h
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGS------------H 180 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~------------~ 180 (257)
+++.... .+.|+|.||||+.|..++.+. .+.+ |++.|.+.....+...+... .
T Consensus 53 i~~~~~~-~~~liGSSlGG~~A~~La~~~-------------~~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~ 117 (187)
T PF05728_consen 53 IEELKPE-NVVLIGSSLGGFYATYLAERY-------------GLPA-VLINPAVRPYELLQDYIGEQTNPYTGESYELTE 117 (187)
T ss_pred HHhCCCC-CeEEEEEChHHHHHHHHHHHh-------------CCCE-EEEcCCCCHHHHHHHhhCccccCCCCccceech
Confidence 7766544 599999999999999999843 3444 66777655444333322110 0
Q ss_pred HH---------HhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC--HHHHHHHHHHH
Q 025121 181 EA---------ARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV--PKEMDEVCNWL 246 (257)
Q Consensus 181 ~~---------~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l 246 (257)
.. .......++++++++.|++++++.+ .+..+ ....++.+|++|.+. .+.+..|++|+
T Consensus 118 ~~~~~l~~l~~~~~~~~~~~lvll~~~DEvLd~~~a---~~~~~-----~~~~~i~~ggdH~f~~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 118 EHIEELKALEVPYPTNPERYLVLLQTGDEVLDYREA---VAKYR-----GCAQIIEEGGDHSFQDFEEYLPQIIAFL 186 (187)
T ss_pred HhhhhcceEeccccCCCccEEEEEecCCcccCHHHH---HHHhc-----CceEEEEeCCCCCCccHHHHHHHHHHhh
Confidence 00 1123356899999999999998554 44444 234456677899987 66778888886
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.3e-14 Score=101.95 Aligned_cols=172 Identities=19% Similarity=0.166 Sum_probs=115.0
Q ss_pred CCCceEEEEEcc---CCCCccc--hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025121 31 GKHQATIVWLHG---LGDNGSS--WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 31 ~~~~~~vi~~HG---~~~~~~~--~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
.+..|+.|.+|= ++++..+ -..+++.|.+.|+.++.+|+|+ .+.+.|. |+.+- -. .++
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRg--VG~S~G~-----fD~Gi---------GE-~~D 87 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRG--VGRSQGE-----FDNGI---------GE-LED 87 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccc--cccccCc-----ccCCc---------ch-HHH
Confidence 366788888887 4555554 3457788889999999999774 3333332 33221 11 333
Q ss_pred HHHHHHHhccCCCCceE-EEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHh
Q 025121 106 AAHIANLLSTEPADVKV-GIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAAR 184 (257)
Q Consensus 106 ~~~~~~~~~~~~~~~~i-~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 184 (257)
+....++++......+. .|.|+|+|+++++.++.+. +.....+.+++.... ......
T Consensus 88 a~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~------------~e~~~~is~~p~~~~----------~dfs~l 145 (210)
T COG2945 88 AAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRR------------PEILVFISILPPINA----------YDFSFL 145 (210)
T ss_pred HHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhc------------ccccceeeccCCCCc----------hhhhhc
Confidence 44555666655544344 7899999999999999963 334445555443331 111223
Q ss_pred hhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC---HHHHHHHHHHHH
Q 025121 185 RAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV---PKEMDEVCNWLT 247 (257)
Q Consensus 185 ~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~---~~~~~~~~~~l~ 247 (257)
.....|.++++|+.|++++.....++.+.. +.+.+.+++++|++. .+..+.+.+|+.
T Consensus 146 ~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~------~~~~i~i~~a~HFF~gKl~~l~~~i~~~l~ 205 (210)
T COG2945 146 APCPSPGLVIQGDADDVVDLVAVLKWQESI------KITVITIPGADHFFHGKLIELRDTIADFLE 205 (210)
T ss_pred cCCCCCceeEecChhhhhcHHHHHHhhcCC------CCceEEecCCCceecccHHHHHHHHHHHhh
Confidence 456889999999999998887766666552 678999999999998 444577777774
|
|
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.61 E-value=9.1e-14 Score=94.64 Aligned_cols=175 Identities=21% Similarity=0.158 Sum_probs=113.3
Q ss_pred EeCCCCCCceEEEEEccCCCCccc--hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHH
Q 025121 26 VVRPKGKHQATIVWLHGLGDNGSS--WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLD 103 (257)
Q Consensus 26 ~~~~~~~~~~~vi~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 103 (257)
...+.+++..+||+-||.|.+.++ +...+..|+..|+.|+.+++|++-.....+ ..+.+....--.
T Consensus 6 ~~~pag~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~------------rkPp~~~~t~~~ 73 (213)
T COG3571 6 LFDPAGPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGR------------RKPPPGSGTLNP 73 (213)
T ss_pred ccCCCCCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccC------------CCCcCccccCCH
Confidence 446777778899999999988775 567888899999999999988642211110 011111111112
Q ss_pred HHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEec-cCCCCchhhhhccccchHH
Q 025121 104 ASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLS-GWLPGSRNLRNKIEGSHEA 182 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~ 182 (257)
..+..+.++-.... ..++++-|+||||.++..++... ...|.++++++ |+.|.-+... ....
T Consensus 74 ~~~~~~aql~~~l~-~gpLi~GGkSmGGR~aSmvade~-----------~A~i~~L~clgYPfhppGKPe~-----~Rt~ 136 (213)
T COG3571 74 EYIVAIAQLRAGLA-EGPLIIGGKSMGGRVASMVADEL-----------QAPIDGLVCLGYPFHPPGKPEQ-----LRTE 136 (213)
T ss_pred HHHHHHHHHHhccc-CCceeeccccccchHHHHHHHhh-----------cCCcceEEEecCccCCCCCccc-----chhh
Confidence 23333334333332 23899999999999999999843 44588988885 3333322111 1122
Q ss_pred HhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC
Q 025121 183 ARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV 235 (257)
Q Consensus 183 ~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 235 (257)
....+++|++|.+|+.|++-..+.+..+ .+. ..++++++.+++|.+-
T Consensus 137 HL~gl~tPtli~qGtrD~fGtr~~Va~y--~ls----~~iev~wl~~adHDLk 183 (213)
T COG3571 137 HLTGLKTPTLITQGTRDEFGTRDEVAGY--ALS----DPIEVVWLEDADHDLK 183 (213)
T ss_pred hccCCCCCeEEeecccccccCHHHHHhh--hcC----CceEEEEeccCccccc
Confidence 3345689999999999999877665222 222 2689999999999764
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.6e-14 Score=110.31 Aligned_cols=195 Identities=19% Similarity=0.193 Sum_probs=119.7
Q ss_pred CCCCCceEEEEEccCCCCccc-h-HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025121 29 PKGKHQATIVWLHGLGDNGSS-W-SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 29 ~~~~~~~~vi~~HG~~~~~~~-~-~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
+....+|.||++||+.++..+ | +.+++.+.++||.+++++.||++........ .| ......++
T Consensus 70 p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~---~y------------h~G~t~D~ 134 (345)
T COG0429 70 PRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPR---LY------------HSGETEDI 134 (345)
T ss_pred ccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcc---ee------------cccchhHH
Confidence 555667999999998766654 4 4588888889999999999987543322111 01 11123445
Q ss_pred HHHHHHhccCCCCceEEEEEechhH-HHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc------------hh--
Q 025121 107 AHIANLLSTEPADVKVGIGGFSMGA-AVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS------------RN-- 171 (257)
Q Consensus 107 ~~~~~~~~~~~~~~~i~l~G~S~Gg-~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------~~-- 171 (257)
..+.+.++....+.++..+|+|+|| +++..++... ....+.+.+.+|.+++.. ..
T Consensus 135 ~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg----------~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~ 204 (345)
T COG0429 135 RFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEG----------DDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYS 204 (345)
T ss_pred HHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhc----------cCcccceeeeeeCHHHHHHHHHHhcCchhhhhhH
Confidence 5666666655555699999999999 5555555432 122334443333221100 00
Q ss_pred ------h-------------------hhcc----------------------------ccchHHHhhhcCCCEEEEccCC
Q 025121 172 ------L-------------------RNKI----------------------------EGSHEAARRAASLPILLTHGLC 198 (257)
Q Consensus 172 ------~-------------------~~~~----------------------------~~~~~~~~~~~~~P~l~~~G~~ 198 (257)
+ ...+ ..........+.+|+||||+.+
T Consensus 205 r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~D 284 (345)
T COG0429 205 RYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKD 284 (345)
T ss_pred HHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCC
Confidence 0 0000 0001113466889999999999
Q ss_pred CCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC-------HH--HHHHHHHHHHHhcCc
Q 025121 199 DDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-------PK--EMDEVCNWLTARLGL 252 (257)
Q Consensus 199 D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-------~~--~~~~~~~~l~~~l~~ 252 (257)
|++++.+.......... +++.+.+.+-+||.-. +. ..+++.+|+...++.
T Consensus 285 DP~~~~~~iP~~~~~~n----p~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~~ 343 (345)
T COG0429 285 DPFMPPEVIPKLQEMLN----PNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLEA 343 (345)
T ss_pred CCCCChhhCCcchhcCC----CceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHhh
Confidence 99999877665555432 2788888888899432 21 237889999887653
|
|
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.9e-14 Score=118.76 Aligned_cols=181 Identities=12% Similarity=0.040 Sum_probs=112.2
Q ss_pred ceEEeCCCCC--CceEEEEEccCCCCccchH-----HHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCC
Q 025121 23 RTHVVRPKGK--HQATIVWLHGLGDNGSSWS-----QLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDG 95 (257)
Q Consensus 23 ~~~~~~~~~~--~~~~vi~~HG~~~~~~~~~-----~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~ 95 (257)
..+.|.|..+ ..++||++|++......+. .+++.|.++||.|+++|++++|.+... .
T Consensus 175 eLi~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~----------------~ 238 (532)
T TIGR01838 175 QLIQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQAD----------------K 238 (532)
T ss_pred EEEEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCccccc----------------C
Confidence 3455555532 5679999999887766654 789999889999999999876533211 0
Q ss_pred CCchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHH----HHHhccccCCCCCCCcccccceEEEeccCCCCchh
Q 025121 96 PEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALY----SATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN 171 (257)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 171 (257)
....+........+..+.+ .....++.++||||||.++.. ++.. ..+++++++++++..++..+.
T Consensus 239 ~~ddY~~~~i~~al~~v~~-~~g~~kv~lvG~cmGGtl~a~ala~~aa~----------~~~~rv~slvll~t~~Df~~~ 307 (532)
T TIGR01838 239 TFDDYIRDGVIAALEVVEA-ITGEKQVNCVGYCIGGTLLSTALAYLAAR----------GDDKRIKSATFFTTLLDFSDP 307 (532)
T ss_pred ChhhhHHHHHHHHHHHHHH-hcCCCCeEEEEECcCcHHHHHHHHHHHHh----------CCCCccceEEEEecCcCCCCc
Confidence 0011111122223333322 223348999999999998632 2332 125578888777654321100
Q ss_pred --------------hhh-----------------------------------------------ccccc-----------
Q 025121 172 --------------LRN-----------------------------------------------KIEGS----------- 179 (257)
Q Consensus 172 --------------~~~-----------------------------------------------~~~~~----------- 179 (257)
+.. +....
T Consensus 308 G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~ 387 (532)
T TIGR01838 308 GELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFY 387 (532)
T ss_pred chhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHH
Confidence 000 00000
Q ss_pred -------------------hHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC
Q 025121 180 -------------------HEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV 235 (257)
Q Consensus 180 -------------------~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 235 (257)
.......+++|+++++|++|.++|.+.+..+.+.+. +.+..+++++||...
T Consensus 388 lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~-----~~~~~vL~~sGHi~~ 457 (532)
T TIGR01838 388 LRNLYLQNALTTGGLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLG-----GPKTFVLGESGHIAG 457 (532)
T ss_pred HHHHHhcCCCcCCeeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCC-----CCEEEEECCCCCchH
Confidence 001345678999999999999999999988888876 346678888999654
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.2e-14 Score=129.84 Aligned_cols=184 Identities=14% Similarity=0.146 Sum_probs=117.7
Q ss_pred CceEEEEEccCCCCccchHHH-----hhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQL-----LESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~-----~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
..++||++||++.+...|+.. .+.|.+.||+|+++|+. .+.. .......++.+.+.
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~G---~~~~----------------~~~~~~~~l~~~i~ 126 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDFG---SPDK----------------VEGGMERNLADHVV 126 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcCC---CCCh----------------hHcCccCCHHHHHH
Confidence 457999999999999999754 67787789999999942 0000 00000133444444
Q ss_pred HHHHHhcc---CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc---------------
Q 025121 108 HIANLLST---EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--------------- 169 (257)
Q Consensus 108 ~~~~~~~~---~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------------- 169 (257)
.+.+.++. ... .++.++||||||.+++.+++..+ +++++.+++++..+...
T Consensus 127 ~l~~~l~~v~~~~~-~~v~lvG~s~GG~~a~~~aa~~~----------~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~ 195 (994)
T PRK07868 127 ALSEAIDTVKDVTG-RDVHLVGYSQGGMFCYQAAAYRR----------SKDIASIVTFGSPVDTLAALPMGIPAGLAAAA 195 (994)
T ss_pred HHHHHHHHHHHhhC-CceEEEEEChhHHHHHHHHHhcC----------CCccceEEEEecccccCCCCcccchhhhhhcc
Confidence 45444432 222 38999999999999998886421 33555555432211000
Q ss_pred ---------------------------------------------hhh------hhccccc--------------hH---
Q 025121 170 ---------------------------------------------RNL------RNKIEGS--------------HE--- 181 (257)
Q Consensus 170 ---------------------------------------------~~~------~~~~~~~--------------~~--- 181 (257)
+.. ....... ..
T Consensus 196 ~~~~~~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~ 275 (994)
T PRK07868 196 ADFMADHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIA 275 (994)
T ss_pred cccchhhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHH
Confidence 000 0000000 00
Q ss_pred ---------------HHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEE-EEecCCCCcc-------CHHH
Q 025121 182 ---------------AARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTF-KSFEGLGHYT-------VPKE 238 (257)
Q Consensus 182 ---------------~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~-~~~~g~~H~~-------~~~~ 238 (257)
.....+++|+|+++|++|.++|++.++.+.+.++ +.++ .+++++||.. ..+.
T Consensus 276 ~n~~~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~-----~a~~~~~~~~~GH~g~~~g~~a~~~~ 350 (994)
T PRK07868 276 HNRMMTGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAP-----NAEVYESLIRAGHFGLVVGSRAAQQT 350 (994)
T ss_pred hCcccCceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-----CCeEEEEeCCCCCEeeeechhhhhhh
Confidence 0134667899999999999999999999988886 4455 5668889984 3667
Q ss_pred HHHHHHHHHHhcC
Q 025121 239 MDEVCNWLTARLG 251 (257)
Q Consensus 239 ~~~~~~~l~~~l~ 251 (257)
+..+.+||.+.-.
T Consensus 351 wp~i~~wl~~~~~ 363 (994)
T PRK07868 351 WPTVADWVKWLEG 363 (994)
T ss_pred ChHHHHHHHHhcc
Confidence 8999999988643
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.5e-14 Score=109.67 Aligned_cols=154 Identities=23% Similarity=0.213 Sum_probs=106.2
Q ss_pred eEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhc
Q 025121 62 IKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 62 ~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
|.|+++|.||.|.+... | ..........+.+..+..+++..... ++.++||||||.+++.++.+
T Consensus 1 f~vi~~d~rG~g~S~~~------~--------~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~vG~S~Gg~~~~~~a~~- 64 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPH------W--------DPDFPDYTTDDLAADLEALREALGIK-KINLVGHSMGGMLALEYAAQ- 64 (230)
T ss_dssp EEEEEEECTTSTTSSSC------C--------GSGSCTHCHHHHHHHHHHHHHHHTTS-SEEEEEETHHHHHHHHHHHH-
T ss_pred CEEEEEeCCCCCCCCCC------c--------cCCcccccHHHHHHHHHHHHHHhCCC-CeEEEEECCChHHHHHHHHH-
Confidence 68999999987654421 0 01222344555566666666554444 69999999999999999995
Q ss_pred cccCCCCCCCcccccceEEEeccCC--CC--c-hhhh-----hcc-----------------------------------
Q 025121 142 ALGRYGNGIPYYVNLRAVVGLSGWL--PG--S-RNLR-----NKI----------------------------------- 176 (257)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~i~~~~~~--~~--~-~~~~-----~~~----------------------------------- 176 (257)
+|+++++++++++.. +. . .... ...
T Consensus 65 ----------~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (230)
T PF00561_consen 65 ----------YPERVKKLVLISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFL 134 (230)
T ss_dssp ----------SGGGEEEEEEESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred ----------CchhhcCcEEEeeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchh
Confidence 489999999998840 00 0 0000 000
Q ss_pred ---------c--------------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEe
Q 025121 177 ---------E--------------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSF 227 (257)
Q Consensus 177 ---------~--------------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 227 (257)
. .........+++|+++++|++|.++|++....+.+.++ +.+++++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~-----~~~~~~~ 209 (230)
T PF00561_consen 135 KQFQSQQYARFAETDAFDNMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIP-----NSQLVLI 209 (230)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHST-----TEEEEEE
T ss_pred hccchhhhhHHHHHHHHhhhccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcC-----CCEEEEC
Confidence 0 00001334589999999999999999999998888887 6789999
Q ss_pred cCCCCccCHHHHHHHHHHH
Q 025121 228 EGLGHYTVPKEMDEVCNWL 246 (257)
Q Consensus 228 ~g~~H~~~~~~~~~~~~~l 246 (257)
++.||....+..+.+.+-|
T Consensus 210 ~~~GH~~~~~~~~~~~~~i 228 (230)
T PF00561_consen 210 EGSGHFAFLEGPDEFNEII 228 (230)
T ss_dssp TTCCSTHHHHSHHHHHHHH
T ss_pred CCCChHHHhcCHHhhhhhh
Confidence 9999999877766666554
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.1e-13 Score=110.07 Aligned_cols=188 Identities=16% Similarity=0.118 Sum_probs=119.5
Q ss_pred CCceEEEEEccCCCC---ccch-HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025121 32 KHQATIVWLHGLGDN---GSSW-SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~---~~~~-~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
...|+||++||.+.. .... ..+...+...|+.|+++|+|.-+. ...+...++..+.+.
T Consensus 77 ~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe------------------~~~p~~~~d~~~a~~ 138 (312)
T COG0657 77 ATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPE------------------HPFPAALEDAYAAYR 138 (312)
T ss_pred CCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCC------------------CCCCchHHHHHHHHH
Confidence 357999999997643 3334 334444556899999999874221 122333444444555
Q ss_pred HHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh---------------
Q 025121 108 HIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN--------------- 171 (257)
Q Consensus 108 ~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--------------- 171 (257)
++.+...+. .+.++|+|+|+|.||.+++.++...... -.....+.+++++++.....
T Consensus 139 ~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~-------~~~~p~~~~li~P~~d~~~~~~~~~~~~~~~~~~~ 211 (312)
T COG0657 139 WLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDR-------GLPLPAAQVLISPLLDLTSSAASLPGYGEADLLDA 211 (312)
T ss_pred HHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhc-------CCCCceEEEEEecccCCcccccchhhcCCccccCH
Confidence 555444332 3346999999999999999999864110 12356777778877554420
Q ss_pred ------hhhcc-c-----c----chHHHh-hhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCcc
Q 025121 172 ------LRNKI-E-----G----SHEAAR-RAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYT 234 (257)
Q Consensus 172 ------~~~~~-~-----~----~~~~~~-~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~ 234 (257)
+...+ . . .+.... ...-.|+++++|+.|.+.+ ++..+.++++++|+ .+++..++|+.|.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~p~~spl~~~~~~~lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv-~~~~~~~~g~~H~f 288 (312)
T COG0657 212 AAILAWFADLYLGAAPDREDPEASPLASDDLSGLPPTLIQTAEFDPLRD--EGEAYAERLRAAGV-PVELRVYPGMIHGF 288 (312)
T ss_pred HHHHHHHHHHhCcCccccCCCccCccccccccCCCCEEEEecCCCcchh--HHHHHHHHHHHcCC-eEEEEEeCCcceec
Confidence 00000 0 0 000000 1115789999999999987 78899999999999 88999999999977
Q ss_pred C-------HHHHHHHHHHHH
Q 025121 235 V-------PKEMDEVCNWLT 247 (257)
Q Consensus 235 ~-------~~~~~~~~~~l~ 247 (257)
. .+.+..+.+|+.
T Consensus 289 ~~~~~~~a~~~~~~~~~~l~ 308 (312)
T COG0657 289 DLLTGPEARSALRQIAAFLR 308 (312)
T ss_pred cccCcHHHHHHHHHHHHHHH
Confidence 3 223455556655
|
|
| >KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.4e-13 Score=108.02 Aligned_cols=191 Identities=16% Similarity=0.141 Sum_probs=127.8
Q ss_pred CCceEEEEEccCCCC-----ccchHHHhhcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025121 32 KHQATIVWLHGLGDN-----GSSWSQLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~-----~~~~~~~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
...|+|||+||.|.. ...|..+...++ ..+..|+++|+|.-+. ...+...++.-..
T Consensus 88 ~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPE------------------h~~Pa~y~D~~~A 149 (336)
T KOG1515|consen 88 TKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPE------------------HPFPAAYDDGWAA 149 (336)
T ss_pred cCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCC------------------CCCCccchHHHHH
Confidence 367999999997743 334677777664 5799999999774221 1223334444555
Q ss_pred HHHHHH--HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc-------
Q 025121 106 AAHIAN--LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI------- 176 (257)
Q Consensus 106 ~~~~~~--~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~------- 176 (257)
+.++.+ +++...+.++++|+|-|.||.+|..++.+..... ..+.++++.|++.|++...+......
T Consensus 150 l~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~-----~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~~~ 224 (336)
T KOG1515|consen 150 LKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEK-----LSKPKIKGQILIYPFFQGTDRTESEKQQNLNGS 224 (336)
T ss_pred HHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhcc-----CCCcceEEEEEEecccCCCCCCCHHHHHhhcCC
Confidence 555554 5555566679999999999999999998753211 23678999999998754332111100
Q ss_pred ----------------cc----------chH------HHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEE
Q 025121 177 ----------------EG----------SHE------AARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTF 224 (257)
Q Consensus 177 ----------------~~----------~~~------~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 224 (257)
.. .+. ......-.|++++.++.|.+. +.+..++++|++.|+ ++++
T Consensus 225 ~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~--D~~~~Y~~~Lkk~Gv-~v~~ 301 (336)
T KOG1515|consen 225 PELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLR--DEGLAYAEKLKKAGV-EVTL 301 (336)
T ss_pred cchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhhh--hhhHHHHHHHHHcCC-eEEE
Confidence 00 000 011122346999999999885 678889999999999 7888
Q ss_pred EEecCCCCccC---------HHHHHHHHHHHHH
Q 025121 225 KSFEGLGHYTV---------PKEMDEVCNWLTA 248 (257)
Q Consensus 225 ~~~~g~~H~~~---------~~~~~~~~~~l~~ 248 (257)
+.++++.|.+. .+..+.+.+|+.+
T Consensus 302 ~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~ 334 (336)
T KOG1515|consen 302 IHYEDGFHGFHILDPSSKEAHALMDAIVEFIKS 334 (336)
T ss_pred EEECCCeeEEEecCCchhhHHHHHHHHHHHHhh
Confidence 89999999765 2345677777765
|
|
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.8e-15 Score=111.21 Aligned_cols=171 Identities=18% Similarity=0.170 Sum_probs=103.5
Q ss_pred EEEEccCCCC---ccchHHHhhcCCC-CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 37 IVWLHGLGDN---GSSWSQLLESLPL-PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 37 vi~~HG~~~~---~~~~~~~~~~l~~-~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
||++||.+.. ......++..++. .|+.|+.+|+|.-+ ....+...+++.+.+.++.+.
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p------------------~~~~p~~~~D~~~a~~~l~~~ 62 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAP------------------EAPFPAALEDVKAAYRWLLKN 62 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TT------------------TSSTTHHHHHHHHHHHHHHHT
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccc------------------cccccccccccccceeeeccc
Confidence 7999997744 3344556666664 79999999976311 111122233333333333333
Q ss_pred hcc-CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCC-c---hhh------hh--cc---
Q 025121 113 LST-EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPG-S---RNL------RN--KI--- 176 (257)
Q Consensus 113 ~~~-~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~---~~~------~~--~~--- 176 (257)
..+ ..+.++|+|+|+|.||.+++.++.+.... ....++++++++|+... . ... .+ .+
T Consensus 63 ~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~-------~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~ 135 (211)
T PF07859_consen 63 ADKLGIDPERIVLIGDSAGGHLALSLALRARDR-------GLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAP 135 (211)
T ss_dssp HHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHT-------TTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHH
T ss_pred cccccccccceEEeecccccchhhhhhhhhhhh-------cccchhhhhcccccccchhccccccccccccccccccccc
Confidence 221 23446999999999999999999864211 02348999999998644 1 111 00 00
Q ss_pred ---------c-c----ch----HHH-hhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC
Q 025121 177 ---------E-G----SH----EAA-RRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV 235 (257)
Q Consensus 177 ---------~-~----~~----~~~-~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 235 (257)
. . .+ ... ....-.|+++++|+.|.++ +.+..+++++++.|+ ++++++++|..|.+.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv-~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 136 KIDWFWKLYLPGSDRDDPLASPLNASDLKGLPPTLIIHGEDDVLV--DDSLRFAEKLKKAGV-DVELHVYPGMPHGFF 210 (211)
T ss_dssp HHHHHHHHHHSTGGTTSTTTSGGGSSCCTTCHEEEEEEETTSTTH--HHHHHHHHHHHHTT--EEEEEEETTEETTGG
T ss_pred ccccccccccccccccccccccccccccccCCCeeeeccccccch--HHHHHHHHHHHHCCC-CEEEEEECCCeEEee
Confidence 0 0 00 000 1112358999999999875 467899999999998 899999999999764
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.58 E-value=9.5e-14 Score=120.78 Aligned_cols=199 Identities=15% Similarity=0.149 Sum_probs=130.4
Q ss_pred CCCceEEEEEccCCCCcc-------chHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHH
Q 025121 31 GKHQATIVWLHGLGDNGS-------SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLD 103 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~-------~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 103 (257)
.++.|+|+.+||..++.. +|... .....|+.|+.+|.||.| .. |.....+. ........+.
T Consensus 523 ~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~--~~-G~~~~~~~-------~~~lG~~ev~ 590 (755)
T KOG2100|consen 523 SKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSG--GY-GWDFRSAL-------PRNLGDVEVK 590 (755)
T ss_pred CCCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcC--Cc-chhHHHHh-------hhhcCCcchH
Confidence 457799999999886332 23333 345689999999977532 11 11110100 0111123345
Q ss_pred HHHHHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcc-cccceEEEeccCCCCch---hhhhcc--
Q 025121 104 ASAAHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYY-VNLRAVVGLSGWLPGSR---NLRNKI-- 176 (257)
Q Consensus 104 ~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~---~~~~~~-- 176 (257)
+....+..+++.. .+..+|.++|+|.||++++.++... + .-++..++++|...... ...++.
T Consensus 591 D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~-----------~~~~fkcgvavaPVtd~~~yds~~terymg 659 (755)
T KOG2100|consen 591 DQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESD-----------PGDVFKCGVAVAPVTDWLYYDSTYTERYMG 659 (755)
T ss_pred HHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhC-----------cCceEEEEEEecceeeeeeecccccHhhcC
Confidence 5555555566554 3346999999999999999999853 4 45666688887533220 000000
Q ss_pred ----------ccchHHHhhhcCCC-EEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC-----HHHHH
Q 025121 177 ----------EGSHEAARRAASLP-ILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-----PKEMD 240 (257)
Q Consensus 177 ----------~~~~~~~~~~~~~P-~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-----~~~~~ 240 (257)
..........++.| .|++||+.|..|+.+++..+.+.|+.+|+ +.+..++|+.+|.+. .....
T Consensus 660 ~p~~~~~~y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv-~~~~~vypde~H~is~~~~~~~~~~ 738 (755)
T KOG2100|consen 660 LPSENDKGYEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGV-PFRLLVYPDENHGISYVEVISHLYE 738 (755)
T ss_pred CCccccchhhhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCC-ceEEEEeCCCCcccccccchHHHHH
Confidence 01111233444455 59999999999999999999999999999 699999999999886 34578
Q ss_pred HHHHHHHHhcCcC
Q 025121 241 EVCNWLTARLGLE 253 (257)
Q Consensus 241 ~~~~~l~~~l~~~ 253 (257)
.+..|+.+.+...
T Consensus 739 ~~~~~~~~~~~~~ 751 (755)
T KOG2100|consen 739 KLDRFLRDCFGSP 751 (755)
T ss_pred HHHHHHHHHcCcc
Confidence 8999999776543
|
|
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.7e-13 Score=100.28 Aligned_cols=191 Identities=18% Similarity=0.138 Sum_probs=123.8
Q ss_pred CCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025121 29 PKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 29 ~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
|.+.+..+||-+||..++..+|+.+...|.+.|++++..++||.|... + .+....+-.+....
T Consensus 30 ~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~--~---------------~~~~~~~n~er~~~ 92 (297)
T PF06342_consen 30 PSGSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTP--G---------------YPDQQYTNEERQNF 92 (297)
T ss_pred CCCCCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCC--C---------------CcccccChHHHHHH
Confidence 455666799999999999999999999999999999999999654322 1 11122233445566
Q ss_pred HHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCC--------CCc-----hhhhhc
Q 025121 109 IANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWL--------PGS-----RNLRNK 175 (257)
Q Consensus 109 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--------~~~-----~~~~~~ 175 (257)
+..+++.....+++.++|||.|+-.|+.++... +..+++++++.- |.. ..+...
T Consensus 93 ~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~-------------~~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~ 159 (297)
T PF06342_consen 93 VNALLDELGIKGKLIFLGHSRGCENALQLAVTH-------------PLHGLVLINPPGLRPHKGIRPLSRMETINYLYDL 159 (297)
T ss_pred HHHHHHHcCCCCceEEEEeccchHHHHHHHhcC-------------ccceEEEecCCccccccCcCHHHHHHHHHHHHHH
Confidence 666777665567999999999999999999842 356777776531 000 000000
Q ss_pred cc----------------------------------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhh
Q 025121 176 IE----------------------------------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLS 215 (257)
Q Consensus 176 ~~----------------------------------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~ 215 (257)
+. .......+..++|+++++|.+|.++-.+...++.+.++
T Consensus 160 lp~~~~~~i~~~~y~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~ 239 (297)
T PF06342_consen 160 LPRFIINAIMYFYYRMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFK 239 (297)
T ss_pred hhHHHHHHHHHHHHHHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHhC
Confidence 00 00001234456999999999999988776666655554
Q ss_pred hc-----------------------CceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 216 IS-----------------------GFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 216 ~~-----------------------~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
.. +. .-..+.+...||+......+.+.+-+.+.|
T Consensus 240 ~l~Hf~~~~~~seee~~kI~~~f~~~~-~~~sv~f~~dgHf~qK~~A~lIA~~i~~mf 296 (297)
T PF06342_consen 240 GLDHFNIEKEISEEEKPKILKSFASGQ-KGASVFFAKDGHFQQKFRADLIAEAIKKMF 296 (297)
T ss_pred CccceeeecCCChhHHHHHHHHHhcCC-ceeEEEEecCChHHhHHHHHHHHHHHHHhh
Confidence 20 11 122344445588877666666666555543
|
|
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.56 E-value=9.5e-14 Score=103.92 Aligned_cols=174 Identities=20% Similarity=0.210 Sum_probs=111.6
Q ss_pred ceEEEEEccCCCCccchHH-HhhcC-------CCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025121 34 QATIVWLHGLGDNGSSWSQ-LLESL-------PLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~-~~~~l-------~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
.|.|||+||.|....+-.. +...+ .+.++-|++|.+- ..-... ...........
T Consensus 191 ~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~----------------~if~d~--e~~t~~~l~~~ 252 (387)
T COG4099 191 YPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYN----------------PIFADS--EEKTLLYLIEK 252 (387)
T ss_pred ccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccc----------------cccccc--ccccchhHHHH
Confidence 4999999999987765332 22211 1334455555411 110111 11223344555
Q ss_pred HHHHHHHhccC-C-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHH
Q 025121 106 AAHIANLLSTE-P-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAA 183 (257)
Q Consensus 106 ~~~~~~~~~~~-~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 183 (257)
++.+.+.+... . +..||.++|.|+||+.++.++. ++|+.+++.+.++|--... ...
T Consensus 253 idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~-----------kfPdfFAaa~~iaG~~d~v-----------~lv 310 (387)
T COG4099 253 IDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAE-----------KFPDFFAAAVPIAGGGDRV-----------YLV 310 (387)
T ss_pred HHHHHHHHhhccCcccceEEEEeecCcchhhHHHHH-----------hCchhhheeeeecCCCchh-----------hhh
Confidence 66666444443 2 3469999999999999999999 5699999999998854321 122
Q ss_pred hhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEec-------CCCCccCH---HHHHHHHHHHHH
Q 025121 184 RRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFE-------GLGHYTVP---KEMDEVCNWLTA 248 (257)
Q Consensus 184 ~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~-------g~~H~~~~---~~~~~~~~~l~~ 248 (257)
....+.|++++|+.+|.++|.+.++-+++++++... ++.+..+. |..|.-.. -...++.+||-+
T Consensus 311 ~~lk~~piWvfhs~dDkv~Pv~nSrv~y~~lk~~~~-kv~Ytaf~~g~~~~eG~d~~g~w~atyn~~eaieWLl~ 384 (387)
T COG4099 311 RTLKKAPIWVFHSSDDKVIPVSNSRVLYERLKALDR-KVNYTAFLEGTTVLEGVDHSGVWWATYNDAEAIEWLLK 384 (387)
T ss_pred hhhccCceEEEEecCCCccccCcceeehHHHHhhcc-ccchhhhhhccccccccCCCCcceeecCCHHHHHHHHh
Confidence 335689999999999999999999999999987654 44544443 44443221 123567778754
|
|
| >KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.7e-13 Score=101.79 Aligned_cols=93 Identities=17% Similarity=0.215 Sum_probs=68.0
Q ss_pred CCCceEEEEEccCCCCccchHHHhhcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 31 GKHQATIVWLHGLGDNGSSWSQLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~~~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
.+..|+++++||.|.+...|..++..+. ....+++++|+|+||.+...- .+.-+.+..++++
T Consensus 71 ~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~-----------------e~dlS~eT~~KD~ 133 (343)
T KOG2564|consen 71 ATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVEN-----------------EDDLSLETMSKDF 133 (343)
T ss_pred CCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCC-----------------hhhcCHHHHHHHH
Confidence 5677899999999999999999998886 457888999999997654321 1112334444555
Q ss_pred HHHhccCCC--CceEEEEEechhHHHHHHHHHh
Q 025121 110 ANLLSTEPA--DVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 110 ~~~~~~~~~--~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
..+++.... +.+|+|+||||||.++...+..
T Consensus 134 ~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~ 166 (343)
T KOG2564|consen 134 GAVIKELFGELPPQIILVGHSMGGAIAVHTAAS 166 (343)
T ss_pred HHHHHHHhccCCCceEEEeccccchhhhhhhhh
Confidence 455544322 2389999999999999988874
|
|
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=99.51 E-value=7.9e-13 Score=98.71 Aligned_cols=121 Identities=28% Similarity=0.345 Sum_probs=75.9
Q ss_pred CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch----------h---h-------------
Q 025121 119 DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR----------N---L------------- 172 (257)
Q Consensus 119 ~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----------~---~------------- 172 (257)
.++|+|+|.|.||-+|+.++.+. + .+.++|+++|..-... . +
T Consensus 21 ~~~Igi~G~SkGaelALllAs~~-----------~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~ 88 (213)
T PF08840_consen 21 PDKIGIIGISKGAELALLLASRF-----------P-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKFSWNEPG 88 (213)
T ss_dssp -SSEEEEEETHHHHHHHHHHHHS-----------S-SEEEEEEES--SB--SSEEEETTE--EE----B-GGG-EE-TTS
T ss_pred CCCEEEEEECHHHHHHHHHHhcC-----------C-CccEEEEeCCceeEecchhcccCCCccCCcCCcChhhceecCCc
Confidence 35999999999999999999963 4 8999998876310000 0 0
Q ss_pred ----hhc-------cccchHHHhhhcCCCEEEEccCCCCcccch-hhHHHHHHhhhcCce-eeEEEEecCCCCccC----
Q 025121 173 ----RNK-------IEGSHEAARRAASLPILLTHGLCDDVVPYK-YGEKSANCLSISGFR-HLTFKSFEGLGHYTV---- 235 (257)
Q Consensus 173 ----~~~-------~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~-~~~~~~~~l~~~~~~-~~~~~~~~g~~H~~~---- 235 (257)
... ..........++++|+|++.|++|..+|.. .++.+.+++++++.+ +.+++.||++||.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i~~Py~ 168 (213)
T PF08840_consen 89 LLRSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLIEPPYF 168 (213)
T ss_dssp -EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S---STT-
T ss_pred ceehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCceecCCCC
Confidence 000 001111245667999999999999999855 457888899988763 578999999999642
Q ss_pred ----------------------------HHHHHHHHHHHHHhcC
Q 025121 236 ----------------------------PKEMDEVCNWLTARLG 251 (257)
Q Consensus 236 ----------------------------~~~~~~~~~~l~~~l~ 251 (257)
.+.++.+++||++.|.
T Consensus 169 P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 169 PHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp ----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 2358899999999875
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.2e-12 Score=98.35 Aligned_cols=181 Identities=17% Similarity=0.086 Sum_probs=112.3
Q ss_pred ceEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhH
Q 025121 23 RTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGL 102 (257)
Q Consensus 23 ~~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 102 (257)
..++++......|+|||+||+.-....|..+.+.++..||.|+.+|.... .. ..........
T Consensus 6 l~v~~P~~~g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~----------------~~--~~~~~~~~~~ 67 (259)
T PF12740_consen 6 LLVYYPSSAGTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSI----------------GG--PDDTDEVASA 67 (259)
T ss_pred eEEEecCCCCCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEeccccc----------------CC--CCcchhHHHH
Confidence 34455666677999999999997777789999999999999999994321 00 1112234445
Q ss_pred HHHHHHHHHHhccCC------CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch--hh-h
Q 025121 103 DASAAHIANLLSTEP------ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR--NL-R 173 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~------~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~-~ 173 (257)
.+.++++.+-+.... +-.+++|.|||.||-++..++..... .....++++++++.|.--... .. .
T Consensus 68 ~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~------~~~~~~~~ali~lDPVdG~~~~~~~~P 141 (259)
T PF12740_consen 68 AEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNAS------SSLDLRFSALILLDPVDGMSKGSQTEP 141 (259)
T ss_pred HHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcc------cccccceeEEEEeccccccccccCCCC
Confidence 555555544333321 12599999999999999999985310 011458999999987542111 11 0
Q ss_pred hccccchHHHhhhcCCCEEEEccCCCC---------cccch-hhHHHHHHhhhcCceeeEEEEecCCCCc
Q 025121 174 NKIEGSHEAARRAASLPILLTHGLCDD---------VVPYK-YGEKSANCLSISGFRHLTFKSFEGLGHY 233 (257)
Q Consensus 174 ~~~~~~~~~~~~~~~~P~l~~~G~~D~---------~v~~~-~~~~~~~~l~~~~~~~~~~~~~~g~~H~ 233 (257)
..+.. .......+.|++++-..-+. ..|.. .-+++++.++. ..-..+..+.||.
T Consensus 142 ~v~~~--~p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~----p~~~~v~~~~GH~ 205 (259)
T PF12740_consen 142 PVLTY--TPQSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKP----PSWHFVAKDYGHM 205 (259)
T ss_pred ccccC--cccccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCC----CEEEEEeCCCCch
Confidence 11111 01112246999998766553 22222 23677777764 4456666889995
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.48 E-value=7.4e-13 Score=99.89 Aligned_cols=181 Identities=16% Similarity=0.168 Sum_probs=114.0
Q ss_pred CCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCccc--------CCCCcccccccCCCCCCCCC---C
Q 025121 29 PKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAI--------LGGFPCTAWFDVGELSDDGP---E 97 (257)
Q Consensus 29 ~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~--------~~g~~~~~w~~~~~~~~~~~---~ 97 (257)
+.+.+.|+|||.||.|++...|..+.-.|+.+||.|.++++|-+.... ..+.....|..+.....++. .
T Consensus 113 tk~~k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~i 192 (399)
T KOG3847|consen 113 TKNDKYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHI 192 (399)
T ss_pred CCCCCccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEe
Confidence 335678999999999999999999999999999999999988664322 12333455655543332222 1
Q ss_pred chhh---HHHHHHHHHHHhccC-----------------------CCCceEEEEEechhHHHHHHHHHhccccCCCCCCC
Q 025121 98 DWEG---LDASAAHIANLLSTE-----------------------PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIP 151 (257)
Q Consensus 98 ~~~~---~~~~~~~~~~~~~~~-----------------------~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~ 151 (257)
.-++ -...+....+++++. ....++.|+|||+||..++.....
T Consensus 193 rNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~----------- 261 (399)
T KOG3847|consen 193 RNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSS----------- 261 (399)
T ss_pred eCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcc-----------
Confidence 1111 111222222222211 111478999999999999988763
Q ss_pred cccccceEEEeccCCCCchhhhhccccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCC
Q 025121 152 YYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLG 231 (257)
Q Consensus 152 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~ 231 (257)
...++..|++.+|+-+.+... ....+-|+++|.-+ |... .+....+.+-.. .+. .-.++.+.|+=
T Consensus 262 -~t~FrcaI~lD~WM~Pl~~~~----------~~~arqP~~finv~-~fQ~-~en~~vmKki~~-~n~-g~~~it~~GsV 326 (399)
T KOG3847|consen 262 -HTDFRCAIALDAWMFPLDQLQ----------YSQARQPTLFINVE-DFQW-NENLLVMKKIES-QNE-GNHVITLDGSV 326 (399)
T ss_pred -ccceeeeeeeeeeecccchhh----------hhhccCCeEEEEcc-cccc-hhHHHHHHhhhC-CCc-cceEEEEccce
Confidence 568999999999875544322 23457899999833 3322 333333333333 322 34788899999
Q ss_pred CccC
Q 025121 232 HYTV 235 (257)
Q Consensus 232 H~~~ 235 (257)
|...
T Consensus 327 Hqnf 330 (399)
T KOG3847|consen 327 HQNF 330 (399)
T ss_pred eccc
Confidence 9654
|
|
| >KOG1838 consensus Alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.7e-12 Score=101.68 Aligned_cols=193 Identities=16% Similarity=0.142 Sum_probs=116.6
Q ss_pred CCceEEEEEccCCCCccc-h-HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSS-W-SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~-~-~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
...|+||++||+.+++.. | +.++..+.+.||++++++.||.+-+.-... .-|. .....++..+
T Consensus 123 ~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTp---r~f~------------ag~t~Dl~~~ 187 (409)
T KOG1838|consen 123 GTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTP---RLFT------------AGWTEDLREV 187 (409)
T ss_pred CCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCC---ceee------------cCCHHHHHHH
Confidence 467999999998766553 3 346666667999999999987532211110 0111 1224445555
Q ss_pred HHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCC--chhhhhcc-----------
Q 025121 110 ANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPG--SRNLRNKI----------- 176 (257)
Q Consensus 110 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~----------- 176 (257)
.+.+++..+..+++.+|+||||.+.+.++.+.. ...+.++++...+||-.. .+.+....
T Consensus 188 v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g--------~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~ 259 (409)
T KOG1838|consen 188 VNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEG--------DNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNRALTL 259 (409)
T ss_pred HHHHHHhCCCCceEEEEecchHHHHHHHhhhcc--------CCCCceeEEEEeccchhhhhhhHHhcccchHHHHHHHHH
Confidence 666666666669999999999999999998631 223455666666676321 00000000
Q ss_pred ---------------------------------------------------ccchHHHhhhcCCCEEEEccCCCCcccch
Q 025121 177 ---------------------------------------------------EGSHEAARRAASLPILLTHGLCDDVVPYK 205 (257)
Q Consensus 177 ---------------------------------------------------~~~~~~~~~~~~~P~l~~~G~~D~~v~~~ 205 (257)
..........+++|+|++++.+|+++|.+
T Consensus 260 ~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~ 339 (409)
T KOG1838|consen 260 NLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEE 339 (409)
T ss_pred hHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcccccccEEEEecCCCCCCCcc
Confidence 01111245678999999999999999986
Q ss_pred hhHHHHHHhhhcCceeeEEEEecCCCCccCHH--------HHHH-HHHHHHHhcC
Q 025121 206 YGEKSANCLSISGFRHLTFKSFEGLGHYTVPK--------EMDE-VCNWLTARLG 251 (257)
Q Consensus 206 ~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~--------~~~~-~~~~l~~~l~ 251 (257)
..- .+..++. +++-+.+-.-+||--.-+ ..++ +.+|+.....
T Consensus 340 ~ip--~~~~~~n--p~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~~ 390 (409)
T KOG1838|consen 340 AIP--IDDIKSN--PNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAIF 390 (409)
T ss_pred cCC--HHHHhcC--CcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHHh
Confidence 431 2222222 266777777779943311 1344 7777766543
|
|
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.4e-13 Score=105.71 Aligned_cols=182 Identities=16% Similarity=0.155 Sum_probs=94.1
Q ss_pred CCceEEeCCC-CCCceEEEEEccCCCCccc--------------h----HHHhhcCCCCceEEEccCCCCCCcccCCCCc
Q 025121 21 FGRTHVVRPK-GKHQATIVWLHGLGDNGSS--------------W----SQLLESLPLPNIKWICPTAPTRPVAILGGFP 81 (257)
Q Consensus 21 ~~~~~~~~~~-~~~~~~vi~~HG~~~~~~~--------------~----~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~ 81 (257)
.+..++.+.. +.+.|+||++||-++.+.. + ..++..|+++||.|+++|.++-|........
T Consensus 101 vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~ 180 (390)
T PF12715_consen 101 VPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGA 180 (390)
T ss_dssp EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCC
T ss_pred EEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEcccccccccccccc
Confidence 3344444544 6788999999998766522 1 1256677899999999999876654332210
Q ss_pred ccccccCCCCCCCCCCchhhH---------------HHHHHHHHHHhccC--CCCceEEEEEechhHHHHHHHHHhcccc
Q 025121 82 CTAWFDVGELSDDGPEDWEGL---------------DASAAHIANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALG 144 (257)
Q Consensus 82 ~~~w~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~ 144 (257)
.. ........+ ..+...+.++++.. .++++|+++|+||||+.++.+++.
T Consensus 181 ~~----------~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaAL---- 246 (390)
T PF12715_consen 181 AQ----------GSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAAL---- 246 (390)
T ss_dssp TT----------TTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH----
T ss_pred cc----------ccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHc----
Confidence 00 000001111 11122245677654 334699999999999999999985
Q ss_pred CCCCCCCcccccceEEEeccCCCCc-hh----------------------hhhc--cccchHHHhhhcCCCEEEEccCCC
Q 025121 145 RYGNGIPYYVNLRAVVGLSGWLPGS-RN----------------------LRNK--IEGSHEAARRAASLPILLTHGLCD 199 (257)
Q Consensus 145 ~~~~~~~~~~~~~~~i~~~~~~~~~-~~----------------------~~~~--~~~~~~~~~~~~~~P~l~~~G~~D 199 (257)
.++|++.+..+ ++... +. +... ....+.........|+|++.|..|
T Consensus 247 --------DdRIka~v~~~-~l~~~~~~~~~mt~~~~~~~~~~~~~~~~~iPgl~r~~D~PdIasliAPRPll~~nG~~D 317 (390)
T PF12715_consen 247 --------DDRIKATVANG-YLCTTQERALLMTMPNNNGLRGFPNCICNYIPGLWRYFDFPDIASLIAPRPLLFENGGKD 317 (390)
T ss_dssp ---------TT--EEEEES--B--HHHHHHHB----TTS----SS-GGG--TTCCCC--HHHHHHTTTTS-EEESS-B-H
T ss_pred --------chhhHhHhhhh-hhhccchhhHhhccccccccCcCcchhhhhCccHHhhCccHHHHHHhCCCcchhhcCCcc
Confidence 78888776543 32211 10 0000 012233344556789999999999
Q ss_pred CcccchhhHHHHHHhhhcCceeeEEEEecC
Q 025121 200 DVVPYKYGEKSANCLSISGFRHLTFKSFEG 229 (257)
Q Consensus 200 ~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g 229 (257)
..+|. ++..++....- .+++++.+|+
T Consensus 318 klf~i--V~~AY~~~~~p--~n~~~~~~p~ 343 (390)
T PF12715_consen 318 KLFPI--VRRAYAIMGAP--DNFQIHHYPK 343 (390)
T ss_dssp HHHHH--HHHHHHHTT-G--GGEEE---GG
T ss_pred cccHH--HHHHHHhcCCC--cceEEeeccc
Confidence 99876 66666665543 2789999885
|
|
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.8e-13 Score=109.23 Aligned_cols=177 Identities=15% Similarity=0.205 Sum_probs=85.2
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcc--cC--CCC-----------cccccccCCCCCCCCC
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVA--IL--GGF-----------PCTAWFDVGELSDDGP 96 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~--~~--~g~-----------~~~~w~~~~~~~~~~~ 96 (257)
...|+|||.||++++...|..++..|+.+||.|+++|+|..... .. ++. ....|...........
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEE 177 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGH
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhH
Confidence 56899999999999999999999999999999999998853211 01 000 0001221111100000
Q ss_pred C--chhhHHH---HHHHHHHHhcc---C-------------------CCCceEEEEEechhHHHHHHHHHhccccCCCCC
Q 025121 97 E--DWEGLDA---SAAHIANLLST---E-------------------PADVKVGIGGFSMGAAVALYSATCCALGRYGNG 149 (257)
Q Consensus 97 ~--~~~~~~~---~~~~~~~~~~~---~-------------------~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~ 149 (257)
. ...++.. .+..+.+.+.. . .+..+|+++|||+||..++..+.+
T Consensus 178 ~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~--------- 248 (379)
T PF03403_consen 178 FELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQ--------- 248 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhh---------
Confidence 0 0011111 11222222211 0 011489999999999999998885
Q ss_pred CCcccccceEEEeccCCCCchhhhhccccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecC
Q 025121 150 IPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEG 229 (257)
Q Consensus 150 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g 229 (257)
..++++.|++.+|+..... .....++.|+|+|+.+.= ...+....+.+... ... +..++.+.|
T Consensus 249 ---d~r~~~~I~LD~W~~Pl~~----------~~~~~i~~P~L~InSe~f--~~~~~~~~~~~~~~-~~~-~~~~~ti~g 311 (379)
T PF03403_consen 249 ---DTRFKAGILLDPWMFPLGD----------EIYSKIPQPLLFINSESF--QWWENIFRMKKVIS-NNK-ESRMLTIKG 311 (379)
T ss_dssp ----TT--EEEEES---TTS-G----------GGGGG--S-EEEEEETTT----HHHHHHHHTT---TTS--EEEEEETT
T ss_pred ---ccCcceEEEeCCcccCCCc----------ccccCCCCCEEEEECccc--CChhhHHHHHHHhc-cCC-CcEEEEECC
Confidence 5789999999998753221 011346889999988742 22223333333222 222 567889999
Q ss_pred CCCcc
Q 025121 230 LGHYT 234 (257)
Q Consensus 230 ~~H~~ 234 (257)
+.|..
T Consensus 312 t~H~s 316 (379)
T PF03403_consen 312 TAHLS 316 (379)
T ss_dssp --GGG
T ss_pred CcCCC
Confidence 99953
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.7e-12 Score=109.69 Aligned_cols=176 Identities=16% Similarity=0.085 Sum_probs=111.0
Q ss_pred HhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh------------ccCCCCc
Q 025121 53 LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL------------STEPADV 120 (257)
Q Consensus 53 ~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~ 120 (257)
+.+.|+.+||.|+..|.||++. ++|. +... ......+..+.++++.... ++.-.+.
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~--SeG~-----~~~~-----~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnG 338 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRG--SDGC-----PTTG-----DYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNG 338 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCC--CCCc-----CccC-----CHHHHHHHHHHHHHHhhCCccccccccccccccCCCCC
Confidence 4566778999999999887653 3332 1110 0112223333333333210 0111135
Q ss_pred eEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh--------------------hh----h--
Q 025121 121 KVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN--------------------LR----N-- 174 (257)
Q Consensus 121 ~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--------------------~~----~-- 174 (257)
+|+++|.|+||++++.+|... ++.++++|..+++....+. +. .
T Consensus 339 kVGm~G~SY~G~~~~~aAa~~-----------pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~ 407 (767)
T PRK05371 339 KVAMTGKSYLGTLPNAVATTG-----------VEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRN 407 (767)
T ss_pred eeEEEEEcHHHHHHHHHHhhC-----------CCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcc
Confidence 999999999999999998853 6777777776543211000 00 0
Q ss_pred ----------------------cc------------ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCce
Q 025121 175 ----------------------KI------------EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFR 220 (257)
Q Consensus 175 ----------------------~~------------~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~ 220 (257)
.. ..........+++|+|++||..|..++++.+.++++.+++.+.
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~- 486 (767)
T PRK05371 408 LLAGDYLRHNEACEKLLAELTAAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGV- 486 (767)
T ss_pred cCcchhhcchHHHHHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCC-
Confidence 00 0011123456889999999999999999999999999998766
Q ss_pred eeEEEEecCCCCccC-----HHHHHHHHHHHHHhcCcC
Q 025121 221 HLTFKSFEGLGHYTV-----PKEMDEVCNWLTARLGLE 253 (257)
Q Consensus 221 ~~~~~~~~g~~H~~~-----~~~~~~~~~~l~~~l~~~ 253 (257)
+.++++.++ +|... .+..+.+.+|+..+|...
T Consensus 487 pkkL~l~~g-~H~~~~~~~~~d~~e~~~~Wfd~~LkG~ 523 (767)
T PRK05371 487 PKKLFLHQG-GHVYPNNWQSIDFRDTMNAWFTHKLLGI 523 (767)
T ss_pred CeEEEEeCC-CccCCCchhHHHHHHHHHHHHHhccccC
Confidence 667777775 88543 245678899999987643
|
|
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.4e-11 Score=85.79 Aligned_cols=131 Identities=15% Similarity=0.127 Sum_probs=93.7
Q ss_pred hhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhh-hhccc
Q 025121 99 WEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL-RNKIE 177 (257)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~ 177 (257)
...++++++.+.+.+... .++++||+||+|+.+++.++.+. ...++|+++++|+-...... .....
T Consensus 40 ~P~~~dWi~~l~~~v~a~--~~~~vlVAHSLGc~~v~h~~~~~-----------~~~V~GalLVAppd~~~~~~~~~~~~ 106 (181)
T COG3545 40 APVLDDWIARLEKEVNAA--EGPVVLVAHSLGCATVAHWAEHI-----------QRQVAGALLVAPPDVSRPEIRPKHLM 106 (181)
T ss_pred CCCHHHHHHHHHHHHhcc--CCCeEEEEecccHHHHHHHHHhh-----------hhccceEEEecCCCccccccchhhcc
Confidence 445677888887777655 33699999999999999999864 55899999999876544211 11111
Q ss_pred cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC-------HHHHHHHHHHHHH
Q 025121 178 GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-------PKEMDEVCNWLTA 248 (257)
Q Consensus 178 ~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-------~~~~~~~~~~l~~ 248 (257)
...........-|.+++..++|++++++.++.+.+... ..++....+||... ++....+.+++.+
T Consensus 107 tf~~~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wg------s~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 107 TFDPIPREPLPFPSVVVASRNDPYVSYEHAEDLANAWG------SALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred ccCCCccccCCCceeEEEecCCCCCCHHHHHHHHHhcc------HhheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 11222334556799999999999999999999999885 46888888888654 4445555555543
|
|
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.6e-11 Score=93.23 Aligned_cols=179 Identities=28% Similarity=0.322 Sum_probs=110.8
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCC--CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPL--PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~--~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
.++|+++||++++...|......+.. ..|.++.+|.|++|.+. . . .......+..+..
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~---~-------------~----~~~~~~~~~~~~~ 80 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD---P-------------A----GYSLSAYADDLAA 80 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC---c-------------c----cccHHHHHHHHHH
Confidence 55999999999999988873333321 12999999999876543 0 0 0111112555555
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCC------------C-----------
Q 025121 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP------------G----------- 168 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------------~----------- 168 (257)
+++..... ++.++|||+||.+++.++.+. +..+++++++++... .
T Consensus 81 ~~~~~~~~-~~~l~G~S~Gg~~~~~~~~~~-----------p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (282)
T COG0596 81 LLDALGLE-KVVLVGHSMGGAVALALALRH-----------PDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLL 148 (282)
T ss_pred HHHHhCCC-ceEEEEecccHHHHHHHHHhc-----------chhhheeeEecCCCCcccccCccccCccccchhhhhhhh
Confidence 66554434 699999999999999999965 444555544442110 0
Q ss_pred -----------------chhhhh-----ccc------------------------------c-chHHHhhhcCCCEEEEc
Q 025121 169 -----------------SRNLRN-----KIE------------------------------G-SHEAARRAASLPILLTH 195 (257)
Q Consensus 169 -----------------~~~~~~-----~~~------------------------------~-~~~~~~~~~~~P~l~~~ 195 (257)
...... ... . ..........+|+++++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 228 (282)
T COG0596 149 LGLDAAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIH 228 (282)
T ss_pred hccchhhhhhhhhcccccccccccchhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEe
Confidence 000000 000 0 00112334569999999
Q ss_pred cCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHH
Q 025121 196 GLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTA 248 (257)
Q Consensus 196 G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~ 248 (257)
|++|.+.|......+.+.++. ..+++++++.+|....+..+.+.+.+.+
T Consensus 229 g~~d~~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 277 (282)
T COG0596 229 GEDDPVVPAELARRLAAALPN----DARLVVIPGAGHFPHLEAPEAFAAALLA 277 (282)
T ss_pred cCCCCcCCHHHHHHHHhhCCC----CceEEEeCCCCCcchhhcHHHHHHHHHH
Confidence 999977676554555555542 2689999999999997776665555554
|
|
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=99.42 E-value=4.3e-12 Score=93.72 Aligned_cols=179 Identities=17% Similarity=0.157 Sum_probs=110.8
Q ss_pred eEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHH
Q 025121 24 THVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLD 103 (257)
Q Consensus 24 ~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 103 (257)
.+..+......|+|+|+||+.-....|..+...++.+||.|++|++-. . ...+.....+...
T Consensus 36 lI~tP~~~G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~----------------~--~~p~~~~Ei~~aa 97 (307)
T PF07224_consen 36 LIVTPSEAGTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYT----------------L--FPPDGQDEIKSAA 97 (307)
T ss_pred EEecCCcCCCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhc----------------c--cCCCchHHHHHHH
Confidence 344444556789999999999888889999999999999999999531 0 1111222334555
Q ss_pred HHHHHHHHHhccCCC------CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch---hhhh
Q 025121 104 ASAAHIANLLSTEPA------DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR---NLRN 174 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~------~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~ 174 (257)
+.++++..-+++... -.+++++|||.||..|..+|... ...-.+.++|.+.|.--... ....
T Consensus 98 ~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~---------a~~lkfsaLIGiDPV~G~~k~~~t~P~ 168 (307)
T PF07224_consen 98 SVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGY---------ATSLKFSALIGIDPVAGTSKGKQTPPP 168 (307)
T ss_pred HHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcc---------cccCchhheecccccCCCCCCCCCCCC
Confidence 555665554443221 15999999999999999999854 23556888888776432221 1111
Q ss_pred ccccchHHHhhhcCCCEEEEccCCC-------Ccccch--hhHHHHHHhhhcCceeeEEEEecCCCCccC
Q 025121 175 KIEGSHEAARRAASLPILLTHGLCD-------DVVPYK--YGEKSANCLSISGFRHLTFKSFEGLGHYTV 235 (257)
Q Consensus 175 ~~~~~~~~~~~~~~~P~l~~~G~~D-------~~v~~~--~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 235 (257)
.+...+ ..-..+.|+++|-..-- .-+.++ .-+++++..+. .+-..+..+.||.-+
T Consensus 169 iLty~p--~SF~l~iPv~VIGtGLg~~~~~~~~~CaP~gvnH~eFf~eCk~----p~~hfV~~dYGHmDm 232 (307)
T PF07224_consen 169 ILTYVP--QSFDLDIPVLVIGTGLGPKRNPLFPPCAPDGVNHEEFFNECKP----PCAHFVAKDYGHMDM 232 (307)
T ss_pred eeecCC--cccccCCceEEEecCcCccccCCCCCCCCCCcCHHHHHHhhcc----cceeeeecccccccc
Confidence 111111 11133589998864433 222222 23778888874 344445556899643
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.6e-11 Score=85.48 Aligned_cols=106 Identities=17% Similarity=0.124 Sum_probs=70.9
Q ss_pred ceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccc------hHH---Hh-hhcCC
Q 025121 120 VKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGS------HEA---AR-RAASL 189 (257)
Q Consensus 120 ~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~------~~~---~~-~~~~~ 189 (257)
+++.|+|.|+||+.|..++.+. .+++|+ +.|.+.+...+...+... ... .. ....-
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~-------------g~~aVL-iNPAv~P~~~L~~~ig~~~~y~~~~~~h~~eL~~~~p~ 125 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC-------------GIRQVI-FNPNLFPEENMEGKIDRPEEYADIATKCVTNFREKNRD 125 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH-------------CCCEEE-ECCCCChHHHHHHHhCCCcchhhhhHHHHHHhhhcCcc
Confidence 3799999999999999999853 455444 566554443333322211 000 11 12233
Q ss_pred CEEEEccCCCCcccchhhHHHHHHhhhcCceee-EEEEecCCCCccC--HHHHHHHHHHHH
Q 025121 190 PILLTHGLCDDVVPYKYGEKSANCLSISGFRHL-TFKSFEGLGHYTV--PKEMDEVCNWLT 247 (257)
Q Consensus 190 P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~-~~~~~~g~~H~~~--~~~~~~~~~~l~ 247 (257)
..+++..+.|++.++..+.+ ++. .+ +.++.+|++|.+. .+.+..|.+|+.
T Consensus 126 r~~vllq~gDEvLDyr~a~~---~y~-----~~y~~~v~~GGdH~f~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 126 RCLVILSRNDEVLDSQRTAE---ELH-----PYYEIVWDEEQTHKFKNISPHLQRIKAFKT 178 (180)
T ss_pred cEEEEEeCCCcccCHHHHHH---Hhc-----cCceEEEECCCCCCCCCHHHHHHHHHHHHh
Confidence 47999999999999866544 443 34 6889999999987 677899999984
|
|
| >KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.8e-12 Score=92.09 Aligned_cols=183 Identities=12% Similarity=0.078 Sum_probs=117.3
Q ss_pred CCceEEEEEccCCCCccc---hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSS---WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~---~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
...+++||+||.-....+ --.....+.+.||+|+.+++- .. .....-...+.+....
T Consensus 65 ~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~-----------------l~---~q~htL~qt~~~~~~g 124 (270)
T KOG4627|consen 65 NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYN-----------------LC---PQVHTLEQTMTQFTHG 124 (270)
T ss_pred CCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccC-----------------cC---cccccHHHHHHHHHHH
Confidence 445699999994332222 222334444689999998732 11 1111123333444444
Q ss_pred HHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc------------
Q 025121 109 IANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI------------ 176 (257)
Q Consensus 109 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~------------ 176 (257)
+.-.++.....+++.+.|||.|++++..+..|. ..+++.++++++|.+...+......
T Consensus 125 v~filk~~~n~k~l~~gGHSaGAHLa~qav~R~----------r~prI~gl~l~~GvY~l~EL~~te~g~dlgLt~~~ae 194 (270)
T KOG4627|consen 125 VNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQ----------RSPRIWGLILLCGVYDLRELSNTESGNDLGLTERNAE 194 (270)
T ss_pred HHHHHHhcccceeEEEcccchHHHHHHHHHHHh----------cCchHHHHHHHhhHhhHHHHhCCccccccCcccchhh
Confidence 433344333345788999999999999999874 3678999999998765443222111
Q ss_pred -ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHH----HHHHHHHHHh
Q 025121 177 -EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEM----DEVCNWLTAR 249 (257)
Q Consensus 177 -~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~----~~~~~~l~~~ 249 (257)
-..........+.|++++.|+.|.---.++.+.+.+.++ +.++..|++.+|+-..+.. ..+..|++++
T Consensus 195 ~~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~-----~a~~~~f~n~~hy~I~~~~~~~~s~~~~~~~~~ 267 (270)
T KOG4627|consen 195 SVSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLR-----KASFTLFKNYDHYDIIEETAIDDSDVSRFLRNI 267 (270)
T ss_pred hcCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhh-----hcceeecCCcchhhHHHHhccccchHHHHHHHH
Confidence 011222345568899999999998877889999999998 5689999999998664432 3455555554
|
|
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.9e-11 Score=104.30 Aligned_cols=113 Identities=16% Similarity=0.100 Sum_probs=71.3
Q ss_pred EEeCCCCCCceEEEEEccCCCCcc---ch-HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchh
Q 025121 25 HVVRPKGKHQATIVWLHGLGDNGS---SW-SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWE 100 (257)
Q Consensus 25 ~~~~~~~~~~~~vi~~HG~~~~~~---~~-~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~ 100 (257)
++.+...++.|+||++||++.+.. .+ ......|+.+||.|+++|.||+|.+. |. ..++. .
T Consensus 13 ~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~--g~--~~~~~------------~ 76 (550)
T TIGR00976 13 VYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASE--GE--FDLLG------------S 76 (550)
T ss_pred EEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCC--Cc--eEecC------------c
Confidence 333434457899999999997653 12 22445667789999999999876543 21 01010 1
Q ss_pred hHHHHHHHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEecc
Q 025121 101 GLDASAAHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG 164 (257)
Q Consensus 101 ~~~~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 164 (257)
...+++..+.+++..+ ..+.+|+++|+|+||.+++.++.+. ++.+++++..++
T Consensus 77 ~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~-----------~~~l~aiv~~~~ 130 (550)
T TIGR00976 77 DEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQ-----------PPALRAIAPQEG 130 (550)
T ss_pred ccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccC-----------CCceeEEeecCc
Confidence 1122333344444333 2234999999999999999999854 566777776554
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.38 E-value=9.4e-12 Score=102.31 Aligned_cols=196 Identities=15% Similarity=0.137 Sum_probs=125.5
Q ss_pred CCCceEEEEEccCCCCcc---chH--H--HhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHH
Q 025121 31 GKHQATIVWLHGLGDNGS---SWS--Q--LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLD 103 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~---~~~--~--~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 103 (257)
+++.|+|+++-|..+--. .|. . -...|+..||.|+++|.||. .-.|.+..+|+..... .-.+.
T Consensus 639 gkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS---~hRGlkFE~~ik~kmG-------qVE~e 708 (867)
T KOG2281|consen 639 GKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGS---AHRGLKFESHIKKKMG-------QVEVE 708 (867)
T ss_pred CCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCc---cccchhhHHHHhhccC-------eeeeh
Confidence 456899999999775322 122 1 12456678999999997753 1224444444432211 22234
Q ss_pred HHHHHHHHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCC---Cchhhhhcccc
Q 025121 104 ASAAHIANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP---GSRNLRNKIEG 178 (257)
Q Consensus 104 ~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~ 178 (257)
+.++.+..+.++. .+.++|++-|+|+||++++..+.+ +|+-++.+|+-+|... ......+++..
T Consensus 709 DQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~-----------~P~IfrvAIAGapVT~W~~YDTgYTERYMg 777 (867)
T KOG2281|consen 709 DQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQ-----------YPNIFRVAIAGAPVTDWRLYDTGYTERYMG 777 (867)
T ss_pred hhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhc-----------CcceeeEEeccCcceeeeeecccchhhhcC
Confidence 4445554444443 334699999999999999999995 4888888776655211 11111111111
Q ss_pred ch-------------HHHhhhc--CCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCH----HHH
Q 025121 179 SH-------------EAARRAA--SLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVP----KEM 239 (257)
Q Consensus 179 ~~-------------~~~~~~~--~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~----~~~ 239 (257)
.+ ....+.. ...+|++||--|+.|...+...|...+-++|. ..++.+||+..|.+-. ..+
T Consensus 778 ~P~~nE~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagK-pyeL~IfP~ERHsiR~~es~~~y 856 (867)
T KOG2281|consen 778 YPDNNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGK-PYELQIFPNERHSIRNPESGIYY 856 (867)
T ss_pred CCccchhcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCC-ceEEEEccccccccCCCccchhH
Confidence 11 1112222 34499999999999999999999999999987 8899999999998752 222
Q ss_pred -HHHHHHHHH
Q 025121 240 -DEVCNWLTA 248 (257)
Q Consensus 240 -~~~~~~l~~ 248 (257)
.+++.|+++
T Consensus 857 E~rll~FlQ~ 866 (867)
T KOG2281|consen 857 EARLLHFLQE 866 (867)
T ss_pred HHHHHHHHhh
Confidence 567777765
|
|
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.5e-11 Score=93.47 Aligned_cols=183 Identities=18% Similarity=0.221 Sum_probs=116.4
Q ss_pred eEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhc
Q 025121 35 ATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLS 114 (257)
Q Consensus 35 ~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (257)
++|+++|+.+++...|..+++.+....+.|+.++.|+++ .......++.+++..+.+.+.
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~--------------------~~~~~~~si~~la~~y~~~I~ 60 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRG--------------------DDEPPPDSIEELASRYAEAIR 60 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSC--------------------TTSHEESSHHHHHHHHHHHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCC--------------------CCCCCCCCHHHHHHHHHHHhh
Confidence 379999999999999999999997335999999988542 011123455666666666665
Q ss_pred cCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhh-----------ccc------
Q 025121 115 TEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN-----------KIE------ 177 (257)
Q Consensus 115 ~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----------~~~------ 177 (257)
......++.|+|||+||.+|+.+|.+... .-..+..++++.++.|....... .+.
T Consensus 61 ~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~--------~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (229)
T PF00975_consen 61 ARQPEGPYVLAGWSFGGILAFEMARQLEE--------AGEEVSRLILIDSPPPSIKERPRSREPSDEQFIEELRRIGGTP 132 (229)
T ss_dssp HHTSSSSEEEEEETHHHHHHHHHHHHHHH--------TT-SESEEEEESCSSTTCHSCHHHHHCHHHHHHHHHHHHCHHH
T ss_pred hhCCCCCeeehccCccHHHHHHHHHHHHH--------hhhccCceEEecCCCCCcccchhhhhhhHHHHHHHHHHhcCCc
Confidence 54444499999999999999999986521 12357888888876664210000 000
Q ss_pred ----cch-----------H--HH-----hhh---cCCCEEEEccCCCCcccchhhH---HHHHHhhhcCceeeEEEEecC
Q 025121 178 ----GSH-----------E--AA-----RRA---ASLPILLTHGLCDDVVPYKYGE---KSANCLSISGFRHLTFKSFEG 229 (257)
Q Consensus 178 ----~~~-----------~--~~-----~~~---~~~P~l~~~G~~D~~v~~~~~~---~~~~~l~~~~~~~~~~~~~~g 229 (257)
... . .. ... ..+|..+.....|.....+.-. .+.+... ..++++.++|
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~----~~~~~~~v~G 208 (229)
T PF00975_consen 133 DASLEDEELLARLLRALRDDFQALENYSIRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTS----GDVEVHDVPG 208 (229)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHTCS-TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBS----SSEEEEEESS
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHhhccCCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcC----CCcEEEEEcC
Confidence 000 0 00 001 1346888888888887655211 2222222 1678999997
Q ss_pred CCCccCHH-HHHHHHHHHHHhc
Q 025121 230 LGHYTVPK-EMDEVCNWLTARL 250 (257)
Q Consensus 230 ~~H~~~~~-~~~~~~~~l~~~l 250 (257)
+|..+.. ....+.+.|.+.|
T Consensus 209 -~H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 209 -DHFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp -ETTGHHSTTHHHHHHHHHHHH
T ss_pred -CCcEecchHHHHHHHHHhccC
Confidence 9987654 6777888777654
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.4e-11 Score=93.84 Aligned_cols=182 Identities=18% Similarity=0.121 Sum_probs=108.3
Q ss_pred ceEEeC--CCCCCceEEEEEccCCCCccchHHHh----------hcCCCCceEEEccCCCCCCcccCCCCcccccccCCC
Q 025121 23 RTHVVR--PKGKHQATIVWLHGLGDNGSSWSQLL----------ESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGE 90 (257)
Q Consensus 23 ~~~~~~--~~~~~~~~vi~~HG~~~~~~~~~~~~----------~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~ 90 (257)
..++.+ ....+.|+||..|+++.......... +.|+++||.|+..|.||+|.+ .|. ++.
T Consensus 7 adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S--~G~-----~~~-- 77 (272)
T PF02129_consen 7 ADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGS--EGE-----FDP-- 77 (272)
T ss_dssp EEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS---S------B-T--
T ss_pred EEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccC--CCc-----ccc--
Confidence 344445 56778999999999996542211111 126679999999998876532 232 110
Q ss_pred CCCCCCCchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch
Q 025121 91 LSDDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR 170 (257)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 170 (257)
.......+..+.|..+.++.-.+.+|+++|.|++|..++.+|... ++.+++++...+..+...
T Consensus 78 ------~~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~-----------~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 78 ------MSPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARR-----------PPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp ------TSHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT------------TTEEEEEEESE-SBTCC
T ss_pred ------CChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcC-----------CCCceEEEecccCCcccc
Confidence 023333333344333333322235999999999999999999854 788888887765322111
Q ss_pred ------------hhhhc-------------------------------------c---------------------ccch
Q 025121 171 ------------NLRNK-------------------------------------I---------------------EGSH 180 (257)
Q Consensus 171 ------------~~~~~-------------------------------------~---------------------~~~~ 180 (257)
....+ . ....
T Consensus 141 ~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ 220 (272)
T PF02129_consen 141 DSIYPGGAFRLGFFAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSP 220 (272)
T ss_dssp TSSEETTEEBCCHHHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBH
T ss_pred cchhcCCcccccchhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCCh
Confidence 00000 0 0001
Q ss_pred HHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcC-ceeeEEEEecCCCCc
Q 025121 181 EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISG-FRHLTFKSFEGLGHY 233 (257)
Q Consensus 181 ~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~-~~~~~~~~~~g~~H~ 233 (257)
......+++|+|++.|-.|..+. ..+.+.++.++..+ . +.++++-|. +|.
T Consensus 221 ~~~~~~i~vP~l~v~Gw~D~~~~-~~~~~~~~~l~~~~~~-~~~Liigpw-~H~ 271 (272)
T PF02129_consen 221 SERLDKIDVPVLIVGGWYDTLFL-RGALRAYEALRAPGSK-PQRLIIGPW-THG 271 (272)
T ss_dssp HHHHGG--SEEEEEEETTCSSTS-HHHHHHHHHHCTTSTC--EEEEEESE-STT
T ss_pred HHHHhhCCCCEEEecccCCcccc-hHHHHHHHHhhcCCCC-CCEEEEeCC-CCC
Confidence 11346789999999999997666 77888889998875 3 458888885 774
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.4e-10 Score=94.64 Aligned_cols=129 Identities=16% Similarity=0.154 Sum_probs=85.5
Q ss_pred HHHHHHHHhccC----CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhh---hhccc
Q 025121 105 SAAHIANLLSTE----PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL---RNKIE 177 (257)
Q Consensus 105 ~~~~~~~~~~~~----~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~~ 177 (257)
..+.+..++++. ...++.+|+|+||||..|+.++.+ +|+.|..++++||.+...... ...+.
T Consensus 269 l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~-----------~Pd~Fg~v~s~Sgs~ww~~~~~~~~~~l~ 337 (411)
T PRK10439 269 VQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLH-----------WPERFGCVLSQSGSFWWPHRGGQQEGVLL 337 (411)
T ss_pred HHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHh-----------CcccccEEEEeccceecCCccCCchhHHH
Confidence 345555555543 233588999999999999999995 499999999999865211100 00000
Q ss_pred c-chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC--HHHHHHHHHHHH
Q 025121 178 G-SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV--PKEMDEVCNWLT 247 (257)
Q Consensus 178 ~-~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~ 247 (257)
. ............+++-+|+.|..+ .+..+++.+.|+++|. ++++.+++| ||... ...+.+.+.||-
T Consensus 338 ~~l~~~~~~~~~lr~~i~~G~~E~~~-~~~~~~l~~~L~~~G~-~~~~~~~~G-GHd~~~Wr~~L~~~L~~l~ 407 (411)
T PRK10439 338 EQLKAGEVSARGLRIVLEAGRREPMI-MRANQALYAQLHPAGH-SVFWRQVDG-GHDALCWRGGLIQGLIDLW 407 (411)
T ss_pred HHHHhcccCCCCceEEEeCCCCCchH-HHHHHHHHHHHHHCCC-cEEEEECCC-CcCHHHHHHHHHHHHHHHh
Confidence 0 000001122346888899988654 4667999999999998 899999997 89754 455555556553
|
|
| >KOG3101 consensus Esterase D [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.3e-11 Score=88.07 Aligned_cols=206 Identities=18% Similarity=0.243 Sum_probs=121.9
Q ss_pred CCCceEEEEEccCCCCccchHH---HhhcCCCCceEEEccCCCCCCcccCCCCcccccccC--------CCCCCCCCCch
Q 025121 31 GKHQATIVWLHGLGDNGSSWSQ---LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDV--------GELSDDGPEDW 99 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~~---~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~--------~~~~~~~~~~~ 99 (257)
+++-|++.++.|+.++..++.. +-+.-.++|+.|+.||...||....+... +| ++ ....++-....
T Consensus 41 ~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~e--sw-DFG~GAGFYvnAt~epw~~~y 117 (283)
T KOG3101|consen 41 GKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDE--SW-DFGQGAGFYVNATQEPWAKHY 117 (283)
T ss_pred CCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcc--cc-cccCCceeEEecccchHhhhh
Confidence 4457999999999999988753 33344478999999998777765543221 22 22 11222222345
Q ss_pred hhHHHHHHHHHHHhccCC---CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch------
Q 025121 100 EGLDASAAHIANLLSTEP---ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR------ 170 (257)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------ 170 (257)
..++...+.+.+++.... +..++.++||||||+-|+..+.+. +.+.+.+-+++|.....+
T Consensus 118 rMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn-----------~~kykSvSAFAPI~NP~~cpWGqK 186 (283)
T KOG3101|consen 118 RMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKN-----------PSKYKSVSAFAPICNPINCPWGQK 186 (283)
T ss_pred hHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcC-----------cccccceeccccccCcccCcchHH
Confidence 556666666767766422 235899999999999999988853 666666665555322111
Q ss_pred ----------hhhhccccch-HHHhhhcCCCEEEEccCCCCcccchh-hHHHHHHhhhcCceeeEEEEecCCCCcc--CH
Q 025121 171 ----------NLRNKIEGSH-EAARRAASLPILLTHGLCDDVVPYKY-GEKSANCLSISGFRHLTFKSFEGLGHYT--VP 236 (257)
Q Consensus 171 ----------~~~~~~~~~~-~~~~~~~~~P~l~~~G~~D~~v~~~~-~~~~~~~l~~~~~~~~~~~~~~g~~H~~--~~ 236 (257)
.-.+.+.... ..........+||-+|..|.+.+.+. -+.+.+..+......+.+...+|-+|.. +.
T Consensus 187 Af~gYLG~~ka~W~~yDat~lik~y~~~~~~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~~~~~v~~r~~~gyDHSYyfIa 266 (283)
T KOG3101|consen 187 AFTGYLGDNKAQWEAYDATHLIKNYRGVGDDILIDQGAADNFLAEQLLPENLLEACKATWQAPVVFRLQEGYDHSYYFIA 266 (283)
T ss_pred HhhcccCCChHHHhhcchHHHHHhcCCCCccEEEecCccchhhhhhcChHHHHHHhhccccccEEEEeecCCCcceeeeh
Confidence 1111111100 11223344569999999999887322 2445555543321257888889999964 33
Q ss_pred HHHHHHHHHHHHhc
Q 025121 237 KEMDEVCNWLTARL 250 (257)
Q Consensus 237 ~~~~~~~~~l~~~l 250 (257)
....+-.++-.+.|
T Consensus 267 TFv~dHi~hHA~~L 280 (283)
T KOG3101|consen 267 TFVADHIEHHAKNL 280 (283)
T ss_pred hhhHHHHHHHHHHh
Confidence 33444444444333
|
|
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.3e-11 Score=99.90 Aligned_cols=176 Identities=10% Similarity=0.030 Sum_probs=111.8
Q ss_pred eEEeCCCC--CCceEEEEEccCCCCccch-----HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCC
Q 025121 24 THVVRPKG--KHQATIVWLHGLGDNGSSW-----SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGP 96 (257)
Q Consensus 24 ~~~~~~~~--~~~~~vi~~HG~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~ 96 (257)
.+.|.|.. ..+.+||+++.+-.....+ +.+++.|.++|+.|+++|.+.-+.. ...
T Consensus 203 LiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~------------------~r~ 264 (560)
T TIGR01839 203 LIQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKA------------------HRE 264 (560)
T ss_pred EEEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChh------------------hcC
Confidence 45555543 3457899999977544444 4688999899999999996631100 111
Q ss_pred CchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHH----HHHhccccCCCCCCCccc-ccceEEEeccCCCCchh
Q 025121 97 EDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALY----SATCCALGRYGNGIPYYV-NLRAVVGLSGWLPGSRN 171 (257)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~----~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~ 171 (257)
...+++.+.+....+.+.......++.++|+|+||.++.. ++++. ++ +++.++++...++....
T Consensus 265 ~~ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~-----------~~~~V~sltllatplDf~~~ 333 (560)
T TIGR01839 265 WGLSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALG-----------QLRKVNSLTYLVSLLDSTME 333 (560)
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcC-----------CCCceeeEEeeecccccCCC
Confidence 1223333344444455555555569999999999999997 55543 43 67777666543322100
Q ss_pred -----------h--------------------------------------------------hhcc--------------
Q 025121 172 -----------L--------------------------------------------------RNKI-------------- 176 (257)
Q Consensus 172 -----------~--------------------------------------------------~~~~-------------- 176 (257)
+ ..+.
T Consensus 334 g~l~~f~~e~~~~~~e~~~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~ 413 (560)
T TIGR01839 334 SPAALFADEQTLEAAKRRSYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDL 413 (560)
T ss_pred CcchhccChHHHHHHHHHHHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHH
Confidence 0 0000
Q ss_pred ----ccc------------hHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCc
Q 025121 177 ----EGS------------HEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHY 233 (257)
Q Consensus 177 ----~~~------------~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~ 233 (257)
..+ .......+++|++++.|+.|.++|.+.+..+.+.+.. +++++..++ ||.
T Consensus 414 l~ly~~N~L~~pG~l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs----~~~fvl~~g-GHI 481 (560)
T TIGR01839 414 LDMFKSNPLTRPDALEVCGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGG----KRRFVLSNS-GHI 481 (560)
T ss_pred HHHHhcCCCCCCCCEEECCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCC----CeEEEecCC-Ccc
Confidence 000 0014566899999999999999999999988887753 578999985 993
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=99.33 E-value=6.1e-12 Score=97.70 Aligned_cols=113 Identities=20% Similarity=0.198 Sum_probs=71.9
Q ss_pred CCCceEEEEEccCCCCc-cchHH-Hhh-cCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025121 31 GKHQATIVWLHGLGDNG-SSWSQ-LLE-SLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~-~~~~~-~~~-~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
++.+|++|++||++++. ..|.. +.+ .+...+++|+++|+++.... . |.. .......+.+.+.
T Consensus 33 ~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~---~------y~~------a~~~~~~v~~~la 97 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANP---N------YPQ------AVNNTRVVGAELA 97 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECcccccc---C------hHH------HHHhHHHHHHHHH
Confidence 45578999999999887 56654 444 34446899999998743100 0 000 0011222223333
Q ss_pred HHHHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc
Q 025121 108 HIANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS 169 (257)
Q Consensus 108 ~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 169 (257)
.+.+.+.+. ...++++|+||||||.++..++.+. +.+++.++++.|..|..
T Consensus 98 ~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~-----------~~~v~~iv~LDPa~p~f 150 (275)
T cd00707 98 KFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRL-----------NGKLGRITGLDPAGPLF 150 (275)
T ss_pred HHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHh-----------cCccceeEEecCCcccc
Confidence 333333222 2335899999999999999999854 77899999998766543
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=99.32 E-value=6e-11 Score=92.69 Aligned_cols=67 Identities=21% Similarity=0.406 Sum_probs=59.3
Q ss_pred cCCCEEEEccCCCCcccchhhHHHHHHhhhcC-ceeeEEEEecCCCCccC-HHHHHHHHHHHHHhcCcCC
Q 025121 187 ASLPILLTHGLCDDVVPYKYGEKSANCLSISG-FRHLTFKSFEGLGHYTV-PKEMDEVCNWLTARLGLEG 254 (257)
Q Consensus 187 ~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~-~~~~~~~~~~g~~H~~~-~~~~~~~~~~l~~~l~~~~ 254 (257)
.+.|+++.||..|+++|+....++++++.+.| . ++++..+++.+|... .......++||.+.|..++
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a-~V~~~~~~~~~H~~~~~~~~~~a~~Wl~~rf~G~~ 286 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGA-DVEYVRYPGGGHLGAAFASAPDALAWLDDRFAGKP 286 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCC-CEEEEecCCCChhhhhhcCcHHHHHHHHHHHCCCC
Confidence 46899999999999999999999999999999 6 899999999999765 4556888999999988654
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.7e-11 Score=94.55 Aligned_cols=197 Identities=20% Similarity=0.155 Sum_probs=121.4
Q ss_pred cCCCCCceEEeCCCC------CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCC-------ccc
Q 025121 17 RTFEFGRTHVVRPKG------KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGF-------PCT 83 (257)
Q Consensus 17 ~~~~~~~~~~~~~~~------~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~-------~~~ 83 (257)
++-..+..+.++... ...|+|++.||.|+...+|..+++.++..||.|..++.|+.-.+..+.. ...
T Consensus 48 r~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~ 127 (365)
T COG4188 48 RDRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPA 127 (365)
T ss_pred cCCccccceeccCCCccccccCcCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchh
Confidence 344444554444332 2679999999999999999999999999999999999997432222110 001
Q ss_pred ccccCCCCCCCCCCchhhHHHHHHHHHHH-----hccCCCCceEEEEEechhHHHHHHHHHhccc-----------c---
Q 025121 84 AWFDVGELSDDGPEDWEGLDASAAHIANL-----LSTEPADVKVGIGGFSMGAAVALYSATCCAL-----------G--- 144 (257)
Q Consensus 84 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~-----------~--- 144 (257)
.|+ +...++...++.+.+. ++...+..+|.++|||+||+.++.++.-... .
T Consensus 128 ~~~----------erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~ 197 (365)
T COG4188 128 EWW----------ERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRIC 197 (365)
T ss_pred hhh----------cccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcc
Confidence 121 2234455555565555 2222334699999999999999988753210 0
Q ss_pred --C-CCC---------------CC-CcccccceEEEeccCCCCchhhhhccccchHHHhhhcCCCEEEEccCCCCcccch
Q 025121 145 --R-YGN---------------GI-PYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYK 205 (257)
Q Consensus 145 --~-~~~---------------~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~ 205 (257)
. ... .. --..++++++++.+.+...-. ......++.|++++.|..|.+.|.+
T Consensus 198 ~~~~~~~~~~l~q~~av~~~~~~~~~rDpriravvA~~p~~~~~Fg---------~tgl~~v~~P~~~~a~s~D~~aP~~ 268 (365)
T COG4188 198 LDPPGLNGRLLNQCAAVWLPRQAYDLRDPRIRAVVAINPALGMIFG---------TTGLVKVTDPVLLAAGSADGFAPPV 268 (365)
T ss_pred cCCCCcChhhhccccccccchhhhccccccceeeeeccCCcccccc---------cccceeeecceeeecccccccCCcc
Confidence 0 000 00 012346666666554332211 1223567999999999999987754
Q ss_pred h-hHHHHHHhhhcCceeeEEEEecCCCCccC
Q 025121 206 Y-GEKSANCLSISGFRHLTFKSFEGLGHYTV 235 (257)
Q Consensus 206 ~-~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 235 (257)
. .......++.. ..-+.+++++.|.-.
T Consensus 269 ~~~~~~f~~l~g~---~k~~~~vp~a~h~sf 296 (365)
T COG4188 269 TEQIRPFGYLPGA---LKYLRLVPGATHFSF 296 (365)
T ss_pred cccccccccCCcc---hhheeecCCCccccc
Confidence 3 34455555532 346788899999765
|
|
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=99.31 E-value=8.9e-11 Score=90.66 Aligned_cols=180 Identities=15% Similarity=0.136 Sum_probs=112.6
Q ss_pred CceEEEEEccCCCCccchHHHhhcCC---CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLP---LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~---~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
++..++|++|..|-...|..+.+.|. ...+.|++..+.||........ ........++.+.++..
T Consensus 1 ~~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~------------~~~~~~~~sL~~QI~hk 68 (266)
T PF10230_consen 1 PRPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSK------------FSPNGRLFSLQDQIEHK 68 (266)
T ss_pred CcEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCccccc------------ccCCCCccCHHHHHHHH
Confidence 35789999999999999988777665 4689999999887633222100 00112233444444444
Q ss_pred H----HHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc---------------
Q 025121 110 A----NLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--------------- 169 (257)
Q Consensus 110 ~----~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------------- 169 (257)
. +++.+.. ...+++|+|||.|+++++.++.+.+ ....++..++++.|.+...
T Consensus 69 ~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~--------~~~~~V~~~~lLfPTi~~ia~Sp~G~~l~~~~~~ 140 (266)
T PF10230_consen 69 IDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLP--------DLKFRVKKVILLFPTIEDIAKSPNGRRLTPLLFS 140 (266)
T ss_pred HHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhcc--------ccCCceeEEEEeCCccccccCCchhHHHHHHHhh
Confidence 4 4444332 3459999999999999999999752 0125677777666531100
Q ss_pred -------------------hhhhh---------------------------------------ccccch-HHHhhh---c
Q 025121 170 -------------------RNLRN---------------------------------------KIEGSH-EAARRA---A 187 (257)
Q Consensus 170 -------------------~~~~~---------------------------------------~~~~~~-~~~~~~---~ 187 (257)
..+.. .+.... ...... .
T Consensus 141 ~~~~~~~~~~~~~l~~~lP~~~~~~lv~~~~~~~~~~~~~t~~~l~~~~~v~qaL~Ma~~Em~~I~~~d~~~~~~~~~~~ 220 (266)
T PF10230_consen 141 PPPLVWLASFLSFLLSLLPESVLRWLVRWVMGFPPPAVEATTKFLLSPRVVRQALYMARDEMREIREDDNDELIKHHNEN 220 (266)
T ss_pred ccHHHHHHHHHHHHHHHCCHHHHHHHHHHHcCCChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHccCcchHHHHHHhccC
Confidence 00000 000111 111111 2
Q ss_pred CCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCcc
Q 025121 188 SLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYT 234 (257)
Q Consensus 188 ~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~ 234 (257)
..++.+..|.+|..||.+..+++.++.+.... ++++.. +|..|.+
T Consensus 221 ~~kl~f~fg~~D~Wvp~~~~~~l~~~~~~~~~-~~~v~~-~~i~HaF 265 (266)
T PF10230_consen 221 GDKLWFYFGQNDHWVPNETRDELIERYPGHEP-DVVVDE-EGIPHAF 265 (266)
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHcCCCCC-eEEEec-CCCCCCC
Confidence 67899999999999999999999999985432 455555 7788875
|
|
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=99.31 E-value=8.2e-11 Score=86.16 Aligned_cols=171 Identities=18% Similarity=0.135 Sum_probs=101.4
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCC-CcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTR-PVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~-g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
.+++||+..|++...+.|..++.+|+.+||.|+.+|.-.| |.+. |. -.........+....+.+
T Consensus 29 ~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSs--G~-------------I~eftms~g~~sL~~V~d 93 (294)
T PF02273_consen 29 RNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSS--GD-------------INEFTMSIGKASLLTVID 93 (294)
T ss_dssp -S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B----------------------------HHHHHHHHHHHHH
T ss_pred cCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCC--CC-------------hhhcchHHhHHHHHHHHH
Confidence 4589999999999999999999999999999999996544 2111 10 011123344556667777
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccc--------------
Q 025121 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIE-------------- 177 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-------------- 177 (257)
+++..... ++.|+.-|+.|.+|+..+.+ ..+..+|..-|.......+.+.+.
T Consensus 94 wl~~~g~~-~~GLIAaSLSaRIAy~Va~~-------------i~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~~lp~d 159 (294)
T PF02273_consen 94 WLATRGIR-RIGLIAASLSARIAYEVAAD-------------INLSFLITAVGVVNLRDTLEKALGYDYLQLPIEQLPED 159 (294)
T ss_dssp HHHHTT----EEEEEETTHHHHHHHHTTT-------------S--SEEEEES--S-HHHHHHHHHSS-GGGS-GGG--SE
T ss_pred HHHhcCCC-cchhhhhhhhHHHHHHHhhc-------------cCcceEEEEeeeeeHHHHHHHHhccchhhcchhhCCCc
Confidence 88755444 89999999999999999983 356667666665443332222110
Q ss_pred -------------------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCC
Q 025121 178 -------------------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGH 232 (257)
Q Consensus 178 -------------------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H 232 (257)
.......+...+|++.+++++|..|......++.+.+... .++++.++|+.|
T Consensus 160 ldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~---~~klysl~Gs~H 236 (294)
T PF02273_consen 160 LDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSN---KCKLYSLPGSSH 236 (294)
T ss_dssp EEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT-----EEEEEETT-SS
T ss_pred ccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCC---ceeEEEecCccc
Confidence 1112245567999999999999999998888887777654 689999999999
Q ss_pred ccC
Q 025121 233 YTV 235 (257)
Q Consensus 233 ~~~ 235 (257)
.+.
T Consensus 237 dL~ 239 (294)
T PF02273_consen 237 DLG 239 (294)
T ss_dssp -TT
T ss_pred hhh
Confidence 865
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.4e-11 Score=97.96 Aligned_cols=112 Identities=21% Similarity=0.226 Sum_probs=72.9
Q ss_pred CCceEEEEEccCCCCc--cchHH-HhhcCC--CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025121 32 KHQATIVWLHGLGDNG--SSWSQ-LLESLP--LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~--~~~~~-~~~~l~--~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
...|++|++||++.+. ..|.. +.+.|. ...++|+++|+++++.+.... .......+.+.+
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~---------------a~~~t~~vg~~l 103 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPT---------------SAAYTKLVGKDV 103 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcc---------------ccccHHHHHHHH
Confidence 3568999999998754 34665 555442 246999999999765322110 011123333444
Q ss_pred HHHHHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc
Q 025121 107 AHIANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS 169 (257)
Q Consensus 107 ~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 169 (257)
..+.+.+... ...+++.|+||||||++|..++.+. +.++.+++++.|..|..
T Consensus 104 a~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~-----------p~rV~rItgLDPAgP~F 157 (442)
T TIGR03230 104 AKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLT-----------KHKVNRITGLDPAGPTF 157 (442)
T ss_pred HHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhC-----------CcceeEEEEEcCCCCcc
Confidence 4444444321 2235999999999999999998853 78899999998865543
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=99.29 E-value=5.3e-11 Score=90.42 Aligned_cols=201 Identities=15% Similarity=0.212 Sum_probs=112.8
Q ss_pred CceEEEEEccCCCCccchHHHhhcCC-CCce----EEEccCCCCCCcccCCC-------CcccccccCCCCCCCCCCchh
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLP-LPNI----KWICPTAPTRPVAILGG-------FPCTAWFDVGELSDDGPEDWE 100 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~-~~g~----~v~~~d~~~~g~~~~~g-------~~~~~w~~~~~~~~~~~~~~~ 100 (257)
...+.||+||++++...+..+++.+. +.+. -++-++.-|+ -...| .+.-. .. .+.+......
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~--v~~~G~~~~~~~nPiIq---V~-F~~n~~~~~~ 83 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGK--VKVSGKLSKNAKNPIIQ---VN-FEDNRNANYK 83 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSE--EEEES---TT-SS-EEE---EE-ESSTT-CHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCe--EEEeeecCCCCCCCEEE---EE-ecCCCcCCHH
Confidence 44589999999999999998888774 3332 2333332221 11111 11000 00 0111112344
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh-------
Q 025121 101 GLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR------- 173 (257)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------- 173 (257)
....++..+...+++...-.++-+|||||||..++.++...... ..-+.+..+|.+++.+.......
T Consensus 84 ~qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~------~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~ 157 (255)
T PF06028_consen 84 KQAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGND------KNLPKLNKLVTIAGPFNGILGMNDDQNQND 157 (255)
T ss_dssp HHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTG------TTS-EEEEEEEES--TTTTTCCSC-TTTT-
T ss_pred HHHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccC------CCCcccceEEEeccccCccccccccchhhh
Confidence 45566666666666665556999999999999999999864211 11346888998887654332111
Q ss_pred ----------hccccchHH--HhhhcCCCEEEEccC------CCCcccchhhHHHHHHhhhcCceeeEEEEecC--CCCc
Q 025121 174 ----------NKIEGSHEA--ARRAASLPILLTHGL------CDDVVPYKYGEKSANCLSISGFRHLTFKSFEG--LGHY 233 (257)
Q Consensus 174 ----------~~~~~~~~~--~~~~~~~P~l~~~G~------~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g--~~H~ 233 (257)
..+...... ..-...+.+|-|.|. .|..||...+..+...++.... ..+-.++.| +.|.
T Consensus 158 ~~~~gp~~~~~~y~~l~~~~~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~-~Y~e~~v~G~~a~HS 236 (255)
T PF06028_consen 158 LNKNGPKSMTPMYQDLLKNRRKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAK-SYQEKTVTGKDAQHS 236 (255)
T ss_dssp CSTT-BSS--HHHHHHHHTHGGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSS-EEEEEEEESGGGSCC
T ss_pred hcccCCcccCHHHHHHHHHHHhhCCCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccC-ceEEEEEECCCCccc
Confidence 000000000 112235679999999 8999999998888888876433 556666654 5787
Q ss_pred cC---HHHHHHHHHHH
Q 025121 234 TV---PKEMDEVCNWL 246 (257)
Q Consensus 234 ~~---~~~~~~~~~~l 246 (257)
-. ++..+.|.+||
T Consensus 237 ~LheN~~V~~~I~~FL 252 (255)
T PF06028_consen 237 QLHENPQVDKLIIQFL 252 (255)
T ss_dssp GGGCCHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHh
Confidence 65 44556777776
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.8e-11 Score=103.00 Aligned_cols=109 Identities=11% Similarity=0.040 Sum_probs=72.1
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcc------cc-cccC-CCCCCCCCCchhhHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPC------TA-WFDV-GELSDDGPEDWEGLDA 104 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~------~~-w~~~-~~~~~~~~~~~~~~~~ 104 (257)
..|+|||+||++++...|..+++.|+..||+|+++|+|+||.+....... .+ +... ....-..++..++...
T Consensus 448 g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~ 527 (792)
T TIGR03502 448 GWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSIL 527 (792)
T ss_pred CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHH
Confidence 34699999999999999999999998889999999999998774321100 00 0000 0000011223444444
Q ss_pred HHHHHHHHhc------cC------CCCceEEEEEechhHHHHHHHHHhc
Q 025121 105 SAAHIANLLS------TE------PADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 105 ~~~~~~~~~~------~~------~~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
++..+...+. .. .+..+++++||||||.++..++...
T Consensus 528 Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 528 DLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred HHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 5555555554 11 2235999999999999999999853
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.1e-10 Score=83.24 Aligned_cols=165 Identities=17% Similarity=0.127 Sum_probs=102.2
Q ss_pred eEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhc
Q 025121 35 ATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLS 114 (257)
Q Consensus 35 ~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (257)
-.+||+-|=|+....-..+++.|+++|+.|+.+|.+. .-| .....++...++..+.+...
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~-----------Yfw---------~~rtP~~~a~Dl~~~i~~y~ 62 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLR-----------YFW---------SERTPEQTAADLARIIRHYR 62 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHH-----------HHh---------hhCCHHHHHHHHHHHHHHHH
Confidence 3688999988877666779999999999999999541 112 12234444444444444444
Q ss_pred cCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc--hhhhhcc------c--cchHHHh
Q 025121 115 TEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--RNLRNKI------E--GSHEAAR 184 (257)
Q Consensus 115 ~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~------~--~~~~~~~ 184 (257)
+.....+++|+|+|+|+-+.-....+.+. ....++..++++++..... -....++ . .......
T Consensus 63 ~~w~~~~vvLiGYSFGADvlP~~~nrLp~-------~~r~~v~~v~Ll~p~~~~dFeihv~~wlg~~~~~~~~~~~pei~ 135 (192)
T PF06057_consen 63 ARWGRKRVVLIGYSFGADVLPFIYNRLPA-------ALRARVAQVVLLSPSTTADFEIHVSGWLGMGGDDAAYPVIPEIA 135 (192)
T ss_pred HHhCCceEEEEeecCCchhHHHHHhhCCH-------HHHhheeEEEEeccCCcceEEEEhhhhcCCCCCcccCCchHHHH
Confidence 44344599999999999888888876532 2356788888877532110 0000010 0 0111223
Q ss_pred hhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHH
Q 025121 185 RAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPK 237 (257)
Q Consensus 185 ~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~ 237 (257)
+....|+++|+|++|.-. ++..++.. +++.+.+|| ||.+..+
T Consensus 136 ~l~~~~v~CiyG~~E~d~-------~cp~l~~~---~~~~i~lpG-gHHfd~d 177 (192)
T PF06057_consen 136 KLPPAPVQCIYGEDEDDS-------LCPSLRQP---GVEVIALPG-GHHFDGD 177 (192)
T ss_pred hCCCCeEEEEEcCCCCCC-------cCccccCC---CcEEEEcCC-CcCCCCC
Confidence 334579999999988642 22223333 679999997 7776643
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.22 E-value=8.2e-10 Score=86.48 Aligned_cols=209 Identities=21% Similarity=0.222 Sum_probs=129.0
Q ss_pred CCCceEEEEEccCCCCccch---HHHhhcCCCCceEEEccCCCCCCcccCCC-----CcccccccCCCCCCC--CCCchh
Q 025121 31 GKHQATIVWLHGLGDNGSSW---SQLLESLPLPNIKWICPTAPTRPVAILGG-----FPCTAWFDVGELSDD--GPEDWE 100 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~---~~~~~~l~~~g~~v~~~d~~~~g~~~~~g-----~~~~~w~~~~~~~~~--~~~~~~ 100 (257)
+.+-|+++++||..++...+ ..+-+.....++.++++|...++...... -...+||........ .+..++
T Consensus 51 ~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~ 130 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWE 130 (316)
T ss_pred CCCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchh
Confidence 35678999999998886443 23445555689999998754332221110 001223322111110 012233
Q ss_pred hHHHHHHHHHHHhcc-CCCC---ceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhc-
Q 025121 101 GLDASAAHIANLLST-EPAD---VKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNK- 175 (257)
Q Consensus 101 ~~~~~~~~~~~~~~~-~~~~---~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~- 175 (257)
++ ....+...+.+ .... .+.+++||||||+-|+.+|.++ |+++..+..++|.+.........
T Consensus 131 tf--l~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~-----------pd~f~~~sS~Sg~~~~s~~~~~~~ 197 (316)
T COG0627 131 TF--LTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKH-----------PDRFKSASSFSGILSPSSPWGPTL 197 (316)
T ss_pred HH--HHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhC-----------cchhceeccccccccccccccccc
Confidence 22 23344433332 2212 2789999999999999999954 78999999988877655111110
Q ss_pred -----------------------cccchHHHh-----hh---------cCCCEEEEccCCCCccc--chhhHHHHHHhhh
Q 025121 176 -----------------------IEGSHEAAR-----RA---------ASLPILLTHGLCDDVVP--YKYGEKSANCLSI 216 (257)
Q Consensus 176 -----------------------~~~~~~~~~-----~~---------~~~P~l~~~G~~D~~v~--~~~~~~~~~~l~~ 216 (257)
....+.... .. ...++++-+|..|.+.. ....+.+.+++.+
T Consensus 198 ~~~~~~g~~~~~~~~G~~~~~~w~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~ 277 (316)
T COG0627 198 AMGDPWGGKAFNAMLGPDSDPAWQENDPLSLIEKLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRA 277 (316)
T ss_pred cccccccCccHHHhcCCCccccccccCchhHHHHhhhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHHh
Confidence 001111111 11 45778888999998875 3346889999998
Q ss_pred cCceeeEEEEecCCCCccC--HHHHHHHHHHHHHhcCcC
Q 025121 217 SGFRHLTFKSFEGLGHYTV--PKEMDEVCNWLTARLGLE 253 (257)
Q Consensus 217 ~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~~~l~~~ 253 (257)
.|. +..+...++.+|... ...++....|+.+.+...
T Consensus 278 ~g~-~~~~~~~~~G~Hsw~~w~~~l~~~~~~~a~~l~~~ 315 (316)
T COG0627 278 AGI-PNGVRDQPGGDHSWYFWASQLADHLPWLAGALGLA 315 (316)
T ss_pred cCC-CceeeeCCCCCcCHHHHHHHHHHHHHHHHHHhccC
Confidence 887 667777788899764 788999999999887653
|
|
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.9e-10 Score=85.52 Aligned_cols=153 Identities=18% Similarity=0.178 Sum_probs=86.7
Q ss_pred CceEEEEEccCCCCccchHHHhhcC--------CCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESL--------PLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l--------~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
.+.+|||+||.+++...++.++..+ ....+.+++.|+........ | .......+.+.+
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~-g-------------~~l~~q~~~~~~ 68 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH-G-------------RTLQRQAEFLAE 68 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccc-c-------------ccHHHHHHHHHH
Confidence 3568999999999988877766554 13468888888653211000 0 001122334445
Q ss_pred HHHHHHHHhcc-CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-----hhhhcccc
Q 025121 105 SAAHIANLLST-EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR-----NLRNKIEG 178 (257)
Q Consensus 105 ~~~~~~~~~~~-~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~~ 178 (257)
.+..+.+.... .....+|+|+||||||.++-.++.... ..+..+..+|.++.+.-... .+...+..
T Consensus 69 ~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~--------~~~~~v~~iitl~tPh~g~~~~~d~~~~~~y~~ 140 (225)
T PF07819_consen 69 AIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPN--------YDPDSVKTIITLGTPHRGSPLAFDRSLDRFYKR 140 (225)
T ss_pred HHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccc--------cccccEEEEEEEcCCCCCccccchHHHHHHHHH
Confidence 55555554422 234469999999999999998887431 11357899998875432221 11111111
Q ss_pred chHHHh-------hhcCCCEE-EEccCCCCcccchhh
Q 025121 179 SHEAAR-------RAASLPIL-LTHGLCDDVVPYKYG 207 (257)
Q Consensus 179 ~~~~~~-------~~~~~P~l-~~~G~~D~~v~~~~~ 207 (257)
...... ....+.++ +.-|..|..++.+..
T Consensus 141 ~~~~~~~~~~~~~~~~~v~~vSi~gG~~D~~v~~~~t 177 (225)
T PF07819_consen 141 LNNFWRKNYSPADSLRDVTVVSIAGGIRDTLVPSDLT 177 (225)
T ss_pred HHHHHHHhcccccccCCceEEEecCCccccccccccc
Confidence 111111 12345555 445789999887654
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.2e-10 Score=86.42 Aligned_cols=128 Identities=22% Similarity=0.264 Sum_probs=79.7
Q ss_pred CceEEeCCC-CCCceEEEEEccCCCCccchHHHh--hcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCC
Q 025121 22 GRTHVVRPK-GKHQATIVWLHGLGDNGSSWSQLL--ESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPE 97 (257)
Q Consensus 22 ~~~~~~~~~-~~~~~~vi~~HG~~~~~~~~~~~~--~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~ 97 (257)
..+++.++. .++.|+||.+||.+++...+.... +.++ ..||.|+.||.-.. .-+......||... ....
T Consensus 48 ~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~---~wn~~~~~~~~~p~----~~~~ 120 (312)
T COG3509 48 SYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDR---AWNANGCGNWFGPA----DRRR 120 (312)
T ss_pred ceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCcccc---ccCCCcccccCCcc----cccC
Confidence 344544544 345589999999998887654433 3333 57999999973211 01122223343221 1122
Q ss_pred chhhHHHHHHHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCC
Q 025121 98 DWEGLDASAAHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP 167 (257)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 167 (257)
...++....+.+..++.+. .++.+|++.|.|-||.++..++.. +++.+.++..+++..+
T Consensus 121 g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~-----------~p~~faa~A~VAg~~~ 180 (312)
T COG3509 121 GVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACE-----------YPDIFAAIAPVAGLLA 180 (312)
T ss_pred CccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhc-----------CcccccceeeeecccC
Confidence 3334444444444555444 344699999999999999999984 5899999988888663
|
|
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.18 E-value=8e-10 Score=80.35 Aligned_cols=215 Identities=14% Similarity=0.105 Sum_probs=117.2
Q ss_pred cCCCCCceEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCC
Q 025121 17 RTFEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGP 96 (257)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~ 96 (257)
++..++.... +..++....|+.--+.|--...|++++...+..||.|+..|+||.|.+...+.....|- .. +
T Consensus 14 DG~~l~~~~~-pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~-~~------D 85 (281)
T COG4757 14 DGYSLPGQRF-PADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWR-YL------D 85 (281)
T ss_pred CCccCccccc-cCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccc-hh------h
Confidence 3444444433 33333333455555555555668889999999999999999998766554443322320 00 0
Q ss_pred CchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccC-C--CCC----C--CcccccceEEEeccCCC
Q 025121 97 EDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGR-Y--GNG----I--PYYVNLRAVVGLSGWLP 167 (257)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~-~--~~~----~--~~~~~~~~~i~~~~~~~ 167 (257)
-...++...++.+.+.+ ..-+...+|||+||.+...+..+..... . ..+ . ...+++..+.+++-..+
T Consensus 86 wA~~D~~aal~~~~~~~----~~~P~y~vgHS~GGqa~gL~~~~~k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p 161 (281)
T COG4757 86 WARLDFPAALAALKKAL----PGHPLYFVGHSFGGQALGLLGQHPKYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGP 161 (281)
T ss_pred hhhcchHHHHHHHHhhC----CCCceEEeeccccceeecccccCcccceeeEeccccccccchhhhhcccceeecccccc
Confidence 11223333333333332 2338999999999998877765320000 0 000 0 00011111111110000
Q ss_pred Cc-----------------------hhhhhccc-----------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHH
Q 025121 168 GS-----------------------RNLRNKIE-----------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANC 213 (257)
Q Consensus 168 ~~-----------------------~~~~~~~~-----------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~ 213 (257)
.. +....+.+ ...........+|+..+...+|+.+|....+.+.+.
T Consensus 162 ~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~ 241 (281)
T COG4757 162 PLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASF 241 (281)
T ss_pred chhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHh
Confidence 00 00000000 111234566799999999999999999999999999
Q ss_pred hhhcCceeeEEEEecC----CCCccC-----HHHHHHHHHHH
Q 025121 214 LSISGFRHLTFKSFEG----LGHYTV-----PKEMDEVCNWL 246 (257)
Q Consensus 214 l~~~~~~~~~~~~~~g----~~H~~~-----~~~~~~~~~~l 246 (257)
.+++ +.+.+.++- .||+-. ...++++++|+
T Consensus 242 y~nA---pl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 242 YRNA---PLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred hhcC---cccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 9877 556666653 478643 23457777765
|
|
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.4e-10 Score=87.69 Aligned_cols=179 Identities=16% Similarity=0.105 Sum_probs=69.2
Q ss_pred CceEEEEEccCCCCccc---hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSS---WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~---~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
+...|||+-|.+..... ...+++.|...+|.++-+.+.- .+.|++. .++++++++|
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsS----Sy~G~G~-----------------~SL~~D~~eI 90 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSS----SYSGWGT-----------------SSLDRDVEEI 90 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GG----GBTTS-S-------------------HHHHHHHH
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecC----ccCCcCc-----------------chhhhHHHHH
Confidence 55699999998875443 5568888877899999998651 2223221 1223333332
Q ss_pred H---HHhccC----CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc------h---hhh
Q 025121 110 A---NLLSTE----PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS------R---NLR 173 (257)
Q Consensus 110 ~---~~~~~~----~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~---~~~ 173 (257)
. ++++.. ....+|+|+|||-|+.-++.++.+.... .....+.++|+-+|.-+.. . .+.
T Consensus 91 ~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~------~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~ 164 (303)
T PF08538_consen 91 AQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPS------PSRPPVDGAILQAPVSDREAILNFLGEREAYE 164 (303)
T ss_dssp HHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---------CCCEEEEEEEEE---TTSTTTSHHH---HH
T ss_pred HHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCcc------ccccceEEEEEeCCCCChhHhhhcccchHHHH
Confidence 2 222222 1345999999999999999999864110 0146789998877632110 0 000
Q ss_pred hcc----------------------------------------------------cc-chHHHhhhcCCCEEEEccCCCC
Q 025121 174 NKI----------------------------------------------------EG-SHEAARRAASLPILLTHGLCDD 200 (257)
Q Consensus 174 ~~~----------------------------------------------------~~-~~~~~~~~~~~P~l~~~G~~D~ 200 (257)
+.+ .. .-......+..|+|++.+.+|+
T Consensus 165 ~~v~~A~~~i~~g~~~~~lp~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DE 244 (303)
T PF08538_consen 165 ELVALAKELIAEGKGDEILPREFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDE 244 (303)
T ss_dssp HHHHHHHHHHHCT-TT-GG----GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT
T ss_pred HHHHHHHHHHHcCCCCceeeccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCc
Confidence 000 00 0001334567899999999999
Q ss_pred cccchh-hHHHHHHhhhcCce---eeEEEEecCCCCccCHHH
Q 025121 201 VVPYKY-GEKSANCLSISGFR---HLTFKSFEGLGHYTVPKE 238 (257)
Q Consensus 201 ~v~~~~-~~~~~~~l~~~~~~---~~~~~~~~g~~H~~~~~~ 238 (257)
.||... .+.+.++++.+-.+ ...-.++||++|.+..+.
T Consensus 245 yvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~ 286 (303)
T PF08538_consen 245 YVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPS 286 (303)
T ss_dssp ------------------------------------------
T ss_pred eecccccccccccccccccccccccccccccccccccccccc
Confidence 999653 35566666543210 123558899999987443
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.2e-09 Score=88.09 Aligned_cols=203 Identities=11% Similarity=0.082 Sum_probs=125.4
Q ss_pred CCCCceEEeCCCCCC----ceEEEEEccCCCCccch-HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCC
Q 025121 19 FEFGRTHVVRPKGKH----QATIVWLHGLGDNGSSW-SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSD 93 (257)
Q Consensus 19 ~~~~~~~~~~~~~~~----~~~vi~~HG~~~~~~~~-~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~ 93 (257)
..+...+.+.+.... .|+||++.-+.++.... +.+.+.|.. |+.|+..|... .+..
T Consensus 83 ~~~~~L~~y~~~~~~~~~~~~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~----------------p~~v-- 143 (406)
T TIGR01849 83 KPFCRLIHFKRQGFRAELPGPAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVN----------------ARMV-- 143 (406)
T ss_pred CCCeEEEEECCCCcccccCCCcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCC----------------CCCC--
Confidence 344556666655322 36888888877665543 558888876 99999998531 1100
Q ss_pred CCCCchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh--
Q 025121 94 DGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN-- 171 (257)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-- 171 (257)
+.....-++++.++.+.++++.. .. ++.|+|.|+||..++.+++..... ..|..++.++++.+.++....
T Consensus 144 p~~~~~f~ldDYi~~l~~~i~~~-G~-~v~l~GvCqgG~~~laa~Al~a~~------~~p~~~~sltlm~~PID~~~~p~ 215 (406)
T TIGR01849 144 PLSAGKFDLEDYIDYLIEFIRFL-GP-DIHVIAVCQPAVPVLAAVALMAEN------EPPAQPRSMTLMGGPIDARASPT 215 (406)
T ss_pred chhcCCCCHHHHHHHHHHHHHHh-CC-CCcEEEEchhhHHHHHHHHHHHhc------CCCCCcceEEEEecCccCCCCCc
Confidence 00112334566667777777655 33 499999999999988777653211 113346666665554322110
Q ss_pred -------------hhh--------------------------------------------cc-ccc--------------
Q 025121 172 -------------LRN--------------------------------------------KI-EGS-------------- 179 (257)
Q Consensus 172 -------------~~~--------------------------------------------~~-~~~-------------- 179 (257)
+.+ .+ ...
T Consensus 216 ~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y 295 (406)
T TIGR01849 216 VVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEY 295 (406)
T ss_pred hHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHh
Confidence 000 00 000
Q ss_pred ---------------------------------hHHHhhhcC-CCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEE
Q 025121 180 ---------------------------------HEAARRAAS-LPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFK 225 (257)
Q Consensus 180 ---------------------------------~~~~~~~~~-~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~ 225 (257)
.......++ +|++.+-|+.|.++|++++..+.+.+...+..+.+.+
T Consensus 296 ~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~ 375 (406)
T TIGR01849 296 LAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHH 375 (406)
T ss_pred hhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEe
Confidence 000345677 9999999999999999999988888633222256677
Q ss_pred EecCCCCccC-------HHHHHHHHHHHHH
Q 025121 226 SFEGLGHYTV-------PKEMDEVCNWLTA 248 (257)
Q Consensus 226 ~~~g~~H~~~-------~~~~~~~~~~l~~ 248 (257)
..+++||.-. .+.+..+.+||.+
T Consensus 376 ~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 376 LQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred ecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 8877899632 5567888888875
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.4e-09 Score=82.20 Aligned_cols=118 Identities=16% Similarity=0.166 Sum_probs=74.2
Q ss_pred CCceEEEEEccCCCCccc-----------hHHHh---hcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCC
Q 025121 32 KHQATIVWLHGLGDNGSS-----------WSQLL---ESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPE 97 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~-----------~~~~~---~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~ 97 (257)
....+|+++|++.++... |..++ +.+.-..|-||+.|..|...+... ++-....+......-
T Consensus 49 ~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStg----P~s~~p~g~~yg~~F 124 (368)
T COG2021 49 EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTG----PSSINPGGKPYGSDF 124 (368)
T ss_pred cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCC----CCCcCCCCCccccCC
Confidence 345699999999985543 33322 234457799999998765422211 110000111111122
Q ss_pred chhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEecc
Q 025121 98 DWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG 164 (257)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 164 (257)
+..++.+++..-..+++......=..++|-||||+.++.++.. ||+++..++.+++
T Consensus 125 P~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~-----------yPd~V~~~i~ia~ 180 (368)
T COG2021 125 PVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIR-----------YPDRVRRAIPIAT 180 (368)
T ss_pred CcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHh-----------ChHHHhhhheecc
Confidence 3456677777766677776666334599999999999999995 5888888877765
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.2e-10 Score=88.34 Aligned_cols=129 Identities=24% Similarity=0.315 Sum_probs=81.3
Q ss_pred HHHHHHHHhccCCCC--ceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhc------c
Q 025121 105 SAAHIANLLSTEPAD--VKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNK------I 176 (257)
Q Consensus 105 ~~~~~~~~~~~~~~~--~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~------~ 176 (257)
..+.|..++++.... .+.+|+|+||||+.|+.++.++ |+.+.+++++||.+.....+... .
T Consensus 98 l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~-----------Pd~F~~~~~~S~~~~~~~~~w~~~~~~~~~ 166 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRH-----------PDLFGAVIAFSGALDPSPSLWGPSDDEAWK 166 (251)
T ss_dssp HHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHS-----------TTTESEEEEESEESETTHCHHHHSTCGHHG
T ss_pred hhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhC-----------ccccccccccCccccccccccCcCCcHHhh
Confidence 445566666654322 2389999999999999999965 99999999999875433111100 0
Q ss_pred cc-----chHHHhhhcCCCEEEEccCCCCcccc----------hhhHHHHHHhhhcCceeeEEEEecCCCCccC--HHHH
Q 025121 177 EG-----SHEAARRAASLPILLTHGLCDDVVPY----------KYGEKSANCLSISGFRHLTFKSFEGLGHYTV--PKEM 239 (257)
Q Consensus 177 ~~-----~~~~~~~~~~~P~l~~~G~~D~~v~~----------~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~ 239 (257)
.. ...........++++..|+.|..... +....+.+.+...+. ...+..++| +|... ...+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~~~~~~~~G-~H~~~~W~~~l 244 (251)
T PF00756_consen 167 ENDPFDLIKALSQKKKPLRIYLDVGTKDEFGGWEDSAQILQFLANNRELAQLLKAKGI-PHTYHVFPG-GHDWAYWRRRL 244 (251)
T ss_dssp GCHHHHHHHHHHHTTSEEEEEEEEETTSTTHHCSHHHHHHHHHHHHHHHHHHCCCEEC-TTESEEEHS-ESSHHHHHHHH
T ss_pred hccHHHHhhhhhcccCCCeEEEEeCCCCcccccccCHHHHHHHHHhHhhHHHHHHcCC-CceEEEecC-ccchhhHHHHH
Confidence 01 11112344567889999999984321 233445555655555 668888895 78653 5555
Q ss_pred HHHHHHH
Q 025121 240 DEVCNWL 246 (257)
Q Consensus 240 ~~~~~~l 246 (257)
...+.|+
T Consensus 245 ~~~L~~~ 251 (251)
T PF00756_consen 245 PDALPWM 251 (251)
T ss_dssp HHHHHHH
T ss_pred HHHHhhC
Confidence 6655554
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=99.10 E-value=2e-10 Score=71.14 Aligned_cols=71 Identities=14% Similarity=0.224 Sum_probs=55.3
Q ss_pred EeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025121 26 VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 26 ~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
.+.|.++++.+|+++||++++...|..+++.|+++||.|+++|++|||.+... .....++.+.
T Consensus 8 ~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~-----------------rg~~~~~~~~ 70 (79)
T PF12146_consen 8 RWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGK-----------------RGHIDSFDDY 70 (79)
T ss_pred EecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCc-----------------ccccCCHHHH
Confidence 44555557899999999999999999999999999999999999998866421 1124455666
Q ss_pred HHHHHHHh
Q 025121 106 AAHIANLL 113 (257)
Q Consensus 106 ~~~~~~~~ 113 (257)
++++..++
T Consensus 71 v~D~~~~~ 78 (79)
T PF12146_consen 71 VDDLHQFI 78 (79)
T ss_pred HHHHHHHh
Confidence 77776655
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.3e-09 Score=85.00 Aligned_cols=177 Identities=16% Similarity=0.104 Sum_probs=107.0
Q ss_pred CCceEEEEEccCCCCccchHH--HhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCc---hhhHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQ--LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPED---WEGLDASA 106 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~--~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~---~~~~~~~~ 106 (257)
+.+|++|.+.|-|++....+. ++..|.+.|+..+.+..|++|........... -....+- -......+
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~-------l~~VsDl~~~g~~~i~E~ 162 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSS-------LRNVSDLFVMGRATILES 162 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhccc-------ccchhHHHHHHhHHHHHH
Confidence 568899999998886544332 36777778999999999977654433211000 0000000 01223344
Q ss_pred HHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCC----------C---chhhh
Q 025121 107 AHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP----------G---SRNLR 173 (257)
Q Consensus 107 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----------~---~~~~~ 173 (257)
..+..+++.+... ++++.|.||||.+|...+... |..+..+-++++... . .+.+.
T Consensus 163 ~~Ll~Wl~~~G~~-~~g~~G~SmGG~~A~laa~~~-----------p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~ 230 (348)
T PF09752_consen 163 RALLHWLEREGYG-PLGLTGISMGGHMAALAASNW-----------PRPVALVPCLSWSSASVVFTEGVLSNSINWDALE 230 (348)
T ss_pred HHHHHHHHhcCCC-ceEEEEechhHhhHHhhhhcC-----------CCceeEEEeecccCCCcchhhhhhhcCCCHHHHH
Confidence 5566677766444 999999999999999999854 444444433332110 0 00000
Q ss_pred hcc--------------------------ccchHH------------------HhhhcCCCEEEEccCCCCcccchhhHH
Q 025121 174 NKI--------------------------EGSHEA------------------ARRAASLPILLTHGLCDDVVPYKYGEK 209 (257)
Q Consensus 174 ~~~--------------------------~~~~~~------------------~~~~~~~P~l~~~G~~D~~v~~~~~~~ 209 (257)
..+ ...... ........++++.+++|.+||.+....
T Consensus 231 ~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~ 310 (348)
T PF09752_consen 231 KQFEDTVYEEEISDIPAQNKSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLS 310 (348)
T ss_pred HHhcccchhhhhcccccCcccccchhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhcch
Confidence 000 000000 001123348999999999999988888
Q ss_pred HHHHhhhcCceeeEEEEecCCCCc
Q 025121 210 SANCLSISGFRHLTFKSFEGLGHY 233 (257)
Q Consensus 210 ~~~~l~~~~~~~~~~~~~~g~~H~ 233 (257)
+.+..+ .+++..++| ||.
T Consensus 311 Lq~~WP-----GsEvR~l~g-GHV 328 (348)
T PF09752_consen 311 LQEIWP-----GSEVRYLPG-GHV 328 (348)
T ss_pred HHHhCC-----CCeEEEecC-CcE
Confidence 888887 678888997 995
|
|
| >KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.09 E-value=6e-10 Score=89.61 Aligned_cols=117 Identities=17% Similarity=0.133 Sum_probs=74.2
Q ss_pred CCCCceEEEEEccCCCCccchH------HHhhcCCCCceEEEccCCCCCCcccCCCC-----ccccc-ccCCCCCCCCCC
Q 025121 30 KGKHQATIVWLHGLGDNGSSWS------QLLESLPLPNIKWICPTAPTRPVAILGGF-----PCTAW-FDVGELSDDGPE 97 (257)
Q Consensus 30 ~~~~~~~vi~~HG~~~~~~~~~------~~~~~l~~~g~~v~~~d~~~~g~~~~~g~-----~~~~w-~~~~~~~~~~~~ 97 (257)
.+.++|+|++.||.-.++..|- .++-.|+++||.|-.-+.||-..+...-. ...-| |+.. ..
T Consensus 69 ~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~------Em 142 (403)
T KOG2624|consen 69 GKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWH------EM 142 (403)
T ss_pred CCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchh------hh
Confidence 3378899999999999998884 35566778999999999886544332211 00112 1110 11
Q ss_pred chhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEecc
Q 025121 98 DWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG 164 (257)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 164 (257)
..+++.+.++.+.+.. ...++..+|||+|+.....+++..+ .+..+++..++++|
T Consensus 143 ~~yDLPA~IdyIL~~T----~~~kl~yvGHSQGtt~~fv~lS~~p--------~~~~kI~~~~aLAP 197 (403)
T KOG2624|consen 143 GTYDLPAMIDYILEKT----GQEKLHYVGHSQGTTTFFVMLSERP--------EYNKKIKSFIALAP 197 (403)
T ss_pred hhcCHHHHHHHHHHhc----cccceEEEEEEccchhheehhcccc--------hhhhhhheeeeecc
Confidence 2334444455544433 3459999999999999998887542 23345666666655
|
|
| >KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.4e-09 Score=87.87 Aligned_cols=100 Identities=22% Similarity=0.203 Sum_probs=77.6
Q ss_pred CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhhhcCCCEEEEccC
Q 025121 118 ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGL 197 (257)
Q Consensus 118 ~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~G~ 197 (257)
...+|+|+|.|||+.+++..... .....+.++|+++-.+...+.-. ...+......+.|+|++.|.
T Consensus 248 pha~IiLvGrsmGAlVachVSps----------nsdv~V~~vVCigypl~~vdgpr----girDE~Lldmk~PVLFV~Gs 313 (784)
T KOG3253|consen 248 PHAPIILVGRSMGALVACHVSPS----------NSDVEVDAVVCIGYPLDTVDGPR----GIRDEALLDMKQPVLFVIGS 313 (784)
T ss_pred CCCceEEEecccCceeeEEeccc----------cCCceEEEEEEecccccCCCccc----CCcchhhHhcCCceEEEecC
Confidence 33599999999998888887763 23445999999875544333211 23444556679999999999
Q ss_pred CCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC
Q 025121 198 CDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV 235 (257)
Q Consensus 198 ~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 235 (257)
+|..++.+..+++.+++++ ..+++++.+++|.+-
T Consensus 314 nd~mcspn~ME~vreKMqA----~~elhVI~~adhsma 347 (784)
T KOG3253|consen 314 NDHMCSPNSMEEVREKMQA----EVELHVIGGADHSMA 347 (784)
T ss_pred CcccCCHHHHHHHHHHhhc----cceEEEecCCCcccc
Confidence 9999999999999999986 678999999999764
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.3e-07 Score=74.58 Aligned_cols=214 Identities=14% Similarity=0.066 Sum_probs=123.2
Q ss_pred CCCCceEEeCCCCCCceEEEEEccCCCCccc---hHHHhhcCCCCceEEEccCCCCCCcccCCCCccc--ccccCCC--C
Q 025121 19 FEFGRTHVVRPKGKHQATIVWLHGLGDNGSS---WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCT--AWFDVGE--L 91 (257)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~vi~~HG~~~~~~~---~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~--~w~~~~~--~ 91 (257)
..|...+.....+++..+||++||.+.+.+. ...+.+.|.+.||.++++..|.-......-.... .--.... .
T Consensus 72 ~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~ 151 (310)
T PF12048_consen 72 ERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQL 151 (310)
T ss_pred EEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCc
Confidence 3444445444556778899999999988753 4567888889999999988775110000000000 0000000 0
Q ss_pred CCC--------------CCCchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccc
Q 025121 92 SDD--------------GPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLR 157 (257)
Q Consensus 92 ~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~ 157 (257)
... .......+...+..+..++++.... +++|+||+.|+..++.++... -...+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~-~ivlIg~G~gA~~~~~~la~~----------~~~~~d 220 (310)
T PF12048_consen 152 SQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGK-NIVLIGHGTGAGWAARYLAEK----------PPPMPD 220 (310)
T ss_pred CCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCc-eEEEEEeChhHHHHHHHHhcC----------CCcccC
Confidence 000 0011223444455555666555433 699999999999999999853 244588
Q ss_pred eEEEeccCCCCchhhhhccccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC--
Q 025121 158 AVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-- 235 (257)
Q Consensus 158 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-- 235 (257)
++|.++++.+....-.. -.......+.|||=|++.+. -.....+..=....+.....+.+-+.+.+..|...
T Consensus 221 aLV~I~a~~p~~~~n~~-----l~~~la~l~iPvLDi~~~~~-~~~~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~~ 294 (310)
T PF12048_consen 221 ALVLINAYWPQPDRNPA-----LAEQLAQLKIPVLDIYSADN-PASQQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPSGW 294 (310)
T ss_pred eEEEEeCCCCcchhhhh-----HHHHhhccCCCEEEEecCCC-hHHHHHHHHHHHHHHhccCCCceeEecCCCCCChhhH
Confidence 99999998876543111 11223457899999998873 32222221111112222112456666777666554
Q ss_pred HH-HHHHHHHHHHHh
Q 025121 236 PK-EMDEVCNWLTAR 249 (257)
Q Consensus 236 ~~-~~~~~~~~l~~~ 249 (257)
.+ ..++|..||.+.
T Consensus 295 ~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 295 QEQLLRRIRGWLKRH 309 (310)
T ss_pred HHHHHHHHHHHHHhh
Confidence 33 567788888653
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >KOG3975 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.98 E-value=4.4e-08 Score=72.21 Aligned_cols=197 Identities=16% Similarity=0.132 Sum_probs=116.8
Q ss_pred CCCCCCceEEEEEccCCCCccchHHHhhcCCC---CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025121 28 RPKGKHQATIVWLHGLGDNGSSWSQLLESLPL---PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 28 ~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~---~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
...+.+++.++++.|..|....|..+++.|-. ....+..+-..+|-... -...........+..++.+
T Consensus 23 ~~~~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P---------~sl~~~~s~~~~eifsL~~ 93 (301)
T KOG3975|consen 23 TKSGEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMP---------ASLREDHSHTNEEIFSLQD 93 (301)
T ss_pred ccCCCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCC---------cccccccccccccccchhh
Confidence 34456789999999999999999887776631 11334444433331100 0011111112334556677
Q ss_pred HHHHHHHHhccCCC-CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC------------------
Q 025121 105 SAAHIANLLSTEPA-DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW------------------ 165 (257)
Q Consensus 105 ~~~~~~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~------------------ 165 (257)
.++.-.+++++... +.+++++|||-|+++.+.++... +..-.+..++++-|-
T Consensus 94 QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~---------k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~ 164 (301)
T KOG3975|consen 94 QVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSI---------KLVFSVQKAVLLFPTIERMHESPNGIRLTKVLR 164 (301)
T ss_pred HHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhc---------ccccceEEEEEecchHHHHhcCCCceEeeeeee
Confidence 77777788877654 35999999999999999998732 111122222222210
Q ss_pred -------------C-CCchhhhh-----------------------------------------ccccchHHHhhhcCCC
Q 025121 166 -------------L-PGSRNLRN-----------------------------------------KIEGSHEAARRAASLP 190 (257)
Q Consensus 166 -------------~-~~~~~~~~-----------------------------------------~~~~~~~~~~~~~~~P 190 (257)
. +.+..... ...............-
T Consensus 165 ~~~hv~~lt~yi~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~ 244 (301)
T KOG3975|consen 165 YLPHVVSLTSYIYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDS 244 (301)
T ss_pred eehhhhheeeeeeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcE
Confidence 0 00000000 0000111234455788
Q ss_pred EEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHH
Q 025121 191 ILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWL 246 (257)
Q Consensus 191 ~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l 246 (257)
+.+.+|+.|..||.+....+.+.+++. ++++-+ +...|.+.....+.++.-+
T Consensus 245 l~Fyygt~DgW~p~~~~d~~kdd~~ee---d~~Lde-dki~HAFV~~~~q~ma~~v 296 (301)
T KOG3975|consen 245 LWFYYGTNDGWVPSHYYDYYKDDVPEE---DLKLDE-DKIPHAFVVKHAQYMANAV 296 (301)
T ss_pred EEEEccCCCCCcchHHHHHHhhhcchh---ceeecc-ccCCcceeecccHHHHHHH
Confidence 999999999999999999999999875 567766 7789998744444444333
|
|
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.95 E-value=2e-08 Score=69.38 Aligned_cols=158 Identities=18% Similarity=0.230 Sum_probs=92.6
Q ss_pred EEEEccCCCCccchHH--HhhcCCC--CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 37 IVWLHGLGDNGSSWSQ--LLESLPL--PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 37 vi~~HG~~~~~~~~~~--~~~~l~~--~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
||++||+.++..+... +.+.+.. ....+.++-+| ......++.+.+.
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~~~~i~y~~p~l~-----------------------------h~p~~a~~ele~~ 52 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDEDVRDIEYSTPHLP-----------------------------HDPQQALKELEKA 52 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhccccceeeecCCCC-----------------------------CCHHHHHHHHHHH
Confidence 8999999998887654 2233331 22333333322 2235567777777
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccch------------
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSH------------ 180 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~------------ 180 (257)
+.+.... ...|+|.|+||+.|..++.+. .+++++ +.|.+-..+.+...+.+..
T Consensus 53 i~~~~~~-~p~ivGssLGGY~At~l~~~~-------------Girav~-~NPav~P~e~l~gylg~~en~ytg~~y~le~ 117 (191)
T COG3150 53 VQELGDE-SPLIVGSSLGGYYATWLGFLC-------------GIRAVV-FNPAVRPYELLTGYLGRPENPYTGQEYVLES 117 (191)
T ss_pred HHHcCCC-CceEEeecchHHHHHHHHHHh-------------CChhhh-cCCCcCchhhhhhhcCCCCCCCCcceEEeeh
Confidence 7776555 689999999999999999854 344444 3333222222222221111
Q ss_pred -------HHHhhhc-CCCEEEEccC-CCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC--HHHHHHHHHHH
Q 025121 181 -------EAARRAA-SLPILLTHGL-CDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV--PKEMDEVCNWL 246 (257)
Q Consensus 181 -------~~~~~~~-~~P~l~~~G~-~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l 246 (257)
....... +...+.+... .|++.++..+.. .+. .+..++.+|.+|.+. ...++.|..|.
T Consensus 118 ~hI~~l~~~~~~~l~~p~~~~lL~qtgDEvLDyr~a~a---~y~-----~~~~~V~dgg~H~F~~f~~~l~~i~aF~ 186 (191)
T COG3150 118 RHIATLCVLQFRELNRPRCLVLLSQTGDEVLDYRQAVA---YYH-----PCYEIVWDGGDHKFKGFSRHLQRIKAFK 186 (191)
T ss_pred hhHHHHHHhhccccCCCcEEEeecccccHHHHHHHHHH---Hhh-----hhhheeecCCCccccchHHhHHHHHHHh
Confidence 1111222 3334444444 499988755544 443 345677788899986 56678888775
|
|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.3e-08 Score=95.68 Aligned_cols=183 Identities=15% Similarity=0.083 Sum_probs=114.8
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.+.++++||++++...|..+.+.|. .++.|+.++.|+++.. .....++.+.++.+.+.+
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~l~-~~~~v~~~~~~g~~~~--------------------~~~~~~l~~la~~~~~~i 1126 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRYLD-PQWSIYGIQSPRPDGP--------------------MQTATSLDEVCEAHLATL 1126 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHhcC-CCCcEEEEECCCCCCC--------------------CCCCCCHHHHHHHHHHHH
Confidence 4679999999999999999999996 6799999998865311 011235566666666666
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-------------hhhhc-----
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR-------------NLRNK----- 175 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------------~~~~~----- 175 (257)
.......++.++|||+||.++..++.+... .+.++..++++.++.+... .+...
T Consensus 1127 ~~~~~~~p~~l~G~S~Gg~vA~e~A~~l~~--------~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1198 (1296)
T PRK10252 1127 LEQQPHGPYHLLGYSLGGTLAQGIAARLRA--------RGEEVAFLGLLDTWPPETQNWREKEANGLDPEVLAEIDRERE 1198 (1296)
T ss_pred HhhCCCCCEEEEEechhhHHHHHHHHHHHH--------cCCceeEEEEecCCCcccccccccccccCChhhhhhhhhhHH
Confidence 554333489999999999999999985321 1445666666554322110 00000
Q ss_pred -----c-ccc--------h----H-------HHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCC
Q 025121 176 -----I-EGS--------H----E-------AARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGL 230 (257)
Q Consensus 176 -----~-~~~--------~----~-------~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~ 230 (257)
. ... . . ........|+.++.+..|..........+.+.. . .++...++|
T Consensus 1199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~--~---~~~~~~v~g- 1272 (1296)
T PRK10252 1199 AFLAAQQGSLSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPEQAWSPWI--A---ELDVYRQDC- 1272 (1296)
T ss_pred HHHHhhhccccHHHHHHHHHHHHHHHHHHHhccCCcccCceEEEEcCCCCcccCCcccchhhhc--C---CCEEEECCC-
Confidence 0 000 0 0 011234678999999988765554444443332 2 567777875
Q ss_pred CCccC--HHHHHHHHHHHHHhcC
Q 025121 231 GHYTV--PKEMDEVCNWLTARLG 251 (257)
Q Consensus 231 ~H~~~--~~~~~~~~~~l~~~l~ 251 (257)
+|..+ .+....+.+++.+.+.
T Consensus 1273 ~H~~~~~~~~~~~~~~~l~~~l~ 1295 (1296)
T PRK10252 1273 AHVDIISPEAFEKIGPILRATLN 1295 (1296)
T ss_pred CHHHHCCcHHHHHHHHHHHHHhc
Confidence 89765 4556777777776543
|
|
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=98.94 E-value=8.1e-08 Score=76.31 Aligned_cols=186 Identities=13% Similarity=0.078 Sum_probs=109.2
Q ss_pred CceEEEEEccCCCCccchH-------HHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWS-------QLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~-------~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
..|+||++||.|-...... .+...|. ...++++|+. ..........-..++.+.
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYs-----------------Lt~~~~~~~~yPtQL~ql 181 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYS-----------------LTSSDEHGHKYPTQLRQL 181 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEecc-----------------ccccccCCCcCchHHHHH
Confidence 4699999999774443322 2333443 5588888843 222111222335566777
Q ss_pred HHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-------hhh-----
Q 025121 106 AAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR-------NLR----- 173 (257)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~~~----- 173 (257)
++....+++.... ++|.|+|-|.||.+++.++....... . ...-+.+|++|||+.... .+.
T Consensus 182 v~~Y~~Lv~~~G~-~nI~LmGDSAGGnL~Ls~LqyL~~~~---~---~~~Pk~~iLISPWv~l~~~~~~~~~~~~~n~~~ 254 (374)
T PF10340_consen 182 VATYDYLVESEGN-KNIILMGDSAGGNLALSFLQYLKKPN---K---LPYPKSAILISPWVNLVPQDSQEGSSYHDNEKR 254 (374)
T ss_pred HHHHHHHHhccCC-CeEEEEecCccHHHHHHHHHHHhhcC---C---CCCCceeEEECCCcCCcCCCCCCCccccccccc
Confidence 7777777755544 49999999999999999887542211 1 123368999999965431 000
Q ss_pred h------------cc-cc--------------------chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCce
Q 025121 174 N------------KI-EG--------------------SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFR 220 (257)
Q Consensus 174 ~------------~~-~~--------------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~ 220 (257)
+ .+ .. ......-....-++++.|+++-+ .+...++.+.+...+..
T Consensus 255 D~l~~~~~~~~~~~y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I~~~~~vfVi~Ge~Evf--rddI~~~~~~~~~~~~~ 332 (374)
T PF10340_consen 255 DMLSYKGLSMFGDAYIGNNDPENDLNSLPFVNIEYNFDAEDWKDILKKYSVFVIYGEDEVF--RDDILEWAKKLNDVKPN 332 (374)
T ss_pred cccchhhHHHHHHhhccccccccccccCCccCcccCCChhHHHHhccCCcEEEEECCcccc--HHHHHHHHHHHhhcCcc
Confidence 0 00 00 00001112345799999998866 55688899998855421
Q ss_pred ----eeEEEEecCCCCccCH-HHHHHHHHHH
Q 025121 221 ----HLTFKSFEGLGHYTVP-KEMDEVCNWL 246 (257)
Q Consensus 221 ----~~~~~~~~g~~H~~~~-~~~~~~~~~l 246 (257)
..+..+-+++.|--+. .....+..|.
T Consensus 333 ~~~~~~nv~~~~~G~Hi~P~~~~~~~~~~W~ 363 (374)
T PF10340_consen 333 KFSNSNNVYIDEGGIHIGPILNYSRDLDKWS 363 (374)
T ss_pred ccCCcceEEEecCCccccchhhhhcCHHHHh
Confidence 2466777888886542 2234444444
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.92 E-value=9e-08 Score=70.82 Aligned_cols=201 Identities=16% Similarity=0.145 Sum_probs=116.5
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCc-----eEEEccCCCCCCcccCCC-------CcccccccCCCCCCCCCCchhh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPN-----IKWICPTAPTRPVAILGG-------FPCTAWFDVGELSDDGPEDWEG 101 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g-----~~v~~~d~~~~g~~~~~g-------~~~~~w~~~~~~~~~~~~~~~~ 101 (257)
.-+.||+||.+++......++..|...+ --++.+|..+. -...| ++.-. + .-+........
T Consensus 45 ~iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgs--lk~tGk~~Kd~~nP~I~---~--gfe~n~~s~~~ 117 (288)
T COG4814 45 AIPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGS--LKVTGKISKDAKNPIIE---F--GFEDNTASGLD 117 (288)
T ss_pred ccceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCc--EEEeeeecccCCCCeEE---E--EEecCcCchhh
Confidence 3478999999999999999988886333 23344443221 11111 11110 0 01112233445
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCC-----Cchhhhhcc
Q 025121 102 LDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP-----GSRNLRNKI 176 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~ 176 (257)
...+...++..|+....-.++-++||||||.....++..... ...+ +.+...+++.+.+. ..+...+..
T Consensus 118 ~s~wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~-----dks~-P~lnK~V~l~gpfN~~~l~~de~v~~v~ 191 (288)
T COG4814 118 QSKWLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGD-----DKSL-PPLNKLVSLAGPFNVGNLVPDETVTDVL 191 (288)
T ss_pred HHHHHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcC-----CCCC-cchhheEEecccccccccCCCcchheee
Confidence 577788888888777665699999999999999999885421 2233 34677777766543 111211111
Q ss_pred cc------ch--HH-----HhhhcCCCEEEEccCC------CCcccchhhHHHHHHhhhcCceeeEEEEe--cCCCCccC
Q 025121 177 EG------SH--EA-----ARRAASLPILLTHGLC------DDVVPYKYGEKSANCLSISGFRHLTFKSF--EGLGHYTV 235 (257)
Q Consensus 177 ~~------~~--~~-----~~~~~~~P~l~~~G~~------D~~v~~~~~~~~~~~l~~~~~~~~~~~~~--~g~~H~~~ 235 (257)
.. .+ .. .....++.+|++.|+- |..||...+...+..+...+. ...-.++ +.+.|.-.
T Consensus 192 ~~~~~~~~t~y~~y~~~n~k~v~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~k-sy~e~~~~Gk~a~Hs~l 270 (288)
T COG4814 192 KDGPGLIKTPYYDYIAKNYKKVSPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGK-SYIESLYKGKDARHSKL 270 (288)
T ss_pred ccCccccCcHHHHHHHhcceeCCCCcEEEEEecccccCCcCCCceechHhHHHHHHhccCcc-eeEEEeeeCCcchhhcc
Confidence 00 00 00 1122356799999984 567777777777777776543 2222234 45778765
Q ss_pred ---HHHHHHHHHHHHH
Q 025121 236 ---PKEMDEVCNWLTA 248 (257)
Q Consensus 236 ---~~~~~~~~~~l~~ 248 (257)
+...+.+..||-+
T Consensus 271 hen~~v~~yv~~FLw~ 286 (288)
T COG4814 271 HENPTVAKYVKNFLWE 286 (288)
T ss_pred CCChhHHHHHHHHhhc
Confidence 3455777777743
|
|
| >KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.88 E-value=5.1e-08 Score=80.93 Aligned_cols=218 Identities=15% Similarity=0.038 Sum_probs=139.5
Q ss_pred ccccCCCCCceEEeCCCC---CCceEEEEEccCCCCcc--chHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccC
Q 025121 14 AARRTFEFGRTHVVRPKG---KHQATIVWLHGLGDNGS--SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDV 88 (257)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~---~~~~~vi~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~ 88 (257)
.+.++...+-.+++.... ..+|.+|+.+|.-+-.- .|..-...|.+.|+.....+.||- |.....|...
T Consensus 447 ~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGG------Ge~G~~WHk~ 520 (712)
T KOG2237|consen 447 SSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGG------GEYGEQWHKD 520 (712)
T ss_pred ecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccC------cccccchhhc
Confidence 345677778787775442 35677777777433322 244433444468999999998863 3333567654
Q ss_pred CCCCCCCCCchhhHHHHHHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCC
Q 025121 89 GELSDDGPEDWEGLDASAAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP 167 (257)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 167 (257)
+.... -...+++.+.....++++.. .+.+..+.|.|.||.++..+.-+. |+.+.++|+-.|+++
T Consensus 521 G~lak----KqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~r-----------PdLF~avia~VpfmD 585 (712)
T KOG2237|consen 521 GRLAK----KQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQR-----------PDLFGAVIAKVPFMD 585 (712)
T ss_pred cchhh----hcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccC-----------chHhhhhhhcCccee
Confidence 33221 23455666666666676654 346999999999999999998865 889999998888776
Q ss_pred Cchhhhhcccc---------------------chHH-----HhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCc--
Q 025121 168 GSRNLRNKIEG---------------------SHEA-----ARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGF-- 219 (257)
Q Consensus 168 ~~~~~~~~~~~---------------------~~~~-----~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~-- 219 (257)
..+........ .+.. .....-.-+|+..+.+|.-|.+..+.++.++++..-.
T Consensus 586 vL~t~~~tilplt~sd~ee~g~p~~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~ 665 (712)
T KOG2237|consen 586 VLNTHKDTILPLTTSDYEEWGNPEDFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDS 665 (712)
T ss_pred hhhhhccCccccchhhhcccCChhhhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcc
Confidence 55433322100 0000 0111123489999999988888888888888875421
Q ss_pred ----eeeEEEEecCCCCccC------HHHHHHHHHHHHHhcCc
Q 025121 220 ----RHLTFKSFEGLGHYTV------PKEMDEVCNWLTARLGL 252 (257)
Q Consensus 220 ----~~~~~~~~~g~~H~~~------~~~~~~~~~~l~~~l~~ 252 (257)
+++-+.+..++||..- .+......+||.+.+..
T Consensus 666 ~~q~~pvll~i~~~agH~~~~~~~k~~~E~a~~yaFl~K~~~~ 708 (712)
T KOG2237|consen 666 LKQTNPVLLRIETKAGHGAEKPRFKQIEEAAFRYAFLAKMLNS 708 (712)
T ss_pred hhcCCCEEEEEecCCccccCCchHHHHHHHHHHHHHHHHHhcC
Confidence 2466778889999865 34456677788776654
|
|
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.84 E-value=2e-07 Score=77.97 Aligned_cols=199 Identities=16% Similarity=0.063 Sum_probs=131.6
Q ss_pred ccCCCCCceEEeCCC---CCCceEEEEEccCCCCccc--hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCC
Q 025121 16 RRTFEFGRTHVVRPK---GKHQATIVWLHGLGDNGSS--WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGE 90 (257)
Q Consensus 16 ~~~~~~~~~~~~~~~---~~~~~~vi~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~ 90 (257)
.+++..+..+++... ..+.|++|+-=|.-+.... |....-.|..+|+.....-.||- |.-...||..+.
T Consensus 427 ~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGG------gelG~~WYe~GK 500 (682)
T COG1770 427 DDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGG------GELGRAWYEDGK 500 (682)
T ss_pred CCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecc------cccChHHHHhhh
Confidence 467778888888754 3466788877775444332 44333445578998888876652 344457887654
Q ss_pred CCCCCCCchhhHHHHHHHHHHHhccCCC-CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc
Q 025121 91 LSDDGPEDWEGLDASAAHIANLLSTEPA-DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS 169 (257)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 169 (257)
... -..++.+.++....++++... .++++++|-|.||.+.-..+... |+.++++|+-.||++..
T Consensus 501 ~l~----K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~-----------P~lf~~iiA~VPFVDvl 565 (682)
T COG1770 501 LLN----KKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMA-----------PDLFAGIIAQVPFVDVL 565 (682)
T ss_pred hhh----ccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhC-----------hhhhhheeecCCccchh
Confidence 322 234556666666666666543 45999999999999999999865 89999999999986544
Q ss_pred hhhhhccc------------------------cchHHH-hhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCcee--e
Q 025121 170 RNLRNKIE------------------------GSHEAA-RRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRH--L 222 (257)
Q Consensus 170 ~~~~~~~~------------------------~~~~~~-~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~--~ 222 (257)
..+.+.-. ..+-.+ ....-.|+|++.|..|..|.+-...++..+|++.+... +
T Consensus 566 tTMlD~slPLT~~E~~EWGNP~d~e~y~yikSYSPYdNV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~pl 645 (682)
T COG1770 566 TTMLDPSLPLTVTEWDEWGNPLDPEYYDYIKSYSPYDNVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPL 645 (682)
T ss_pred hhhcCCCCCCCccchhhhCCcCCHHHHHHHhhcCchhccccCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcE
Confidence 43332110 001111 12345789999999999999999999999999875421 3
Q ss_pred EEEEecCCCCccC
Q 025121 223 TFKSFEGLGHYTV 235 (257)
Q Consensus 223 ~~~~~~g~~H~~~ 235 (257)
=+.+=-++||.-.
T Consensus 646 Llkt~M~aGHgG~ 658 (682)
T COG1770 646 LLKTNMDAGHGGA 658 (682)
T ss_pred EEEecccccCCCC
Confidence 3333245899543
|
|
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=98.84 E-value=3.4e-08 Score=75.34 Aligned_cols=186 Identities=13% Similarity=0.092 Sum_probs=108.5
Q ss_pred CCceEEEEEccCCCCccc-hHHHhh-----cCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025121 32 KHQATIVWLHGLGDNGSS-WSQLLE-----SLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~-~~~~~~-----~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
..+|++|-.|..|-+... |..+.. .+. ..+.++=+|.||+..+... -+......++++.
T Consensus 21 ~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~-~~f~i~Hi~aPGqe~ga~~--------------~p~~y~yPsmd~L 85 (283)
T PF03096_consen 21 GNKPAILTYHDVGLNHKSCFQGFFNFEDMQEIL-QNFCIYHIDAPGQEEGAAT--------------LPEGYQYPSMDQL 85 (283)
T ss_dssp TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHH-TTSEEEEEE-TTTSTT-------------------TT-----HHHH
T ss_pred CCCceEEEeccccccchHHHHHHhcchhHHHHh-hceEEEEEeCCCCCCCccc--------------ccccccccCHHHH
Confidence 368999999999988776 554432 333 6789999999987432211 1112235566777
Q ss_pred HHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch---------------
Q 025121 106 AAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR--------------- 170 (257)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------------- 170 (257)
++.+.+.++..... .++-+|--.|+++-.++|.. +|+++.++|++++-.....
T Consensus 86 Ae~l~~Vl~~f~lk-~vIg~GvGAGAnIL~rfAl~-----------~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~ 153 (283)
T PF03096_consen 86 AEMLPEVLDHFGLK-SVIGFGVGAGANILARFALK-----------HPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLY 153 (283)
T ss_dssp HCTHHHHHHHHT----EEEEEETHHHHHHHHHHHH-----------SGGGEEEEEEES---S---HHHHHHHHHH-----
T ss_pred HHHHHHHHHhCCcc-EEEEEeeccchhhhhhcccc-----------CccceeEEEEEecCCCCccHHHHHHHHHhccccc
Confidence 77777777765554 89999999999999999995 4999999999976311100
Q ss_pred ------------------------------hhhhcccc-ch-----------------HHHhhhcCCCEEEEccCCCCcc
Q 025121 171 ------------------------------NLRNKIEG-SH-----------------EAARRAASLPILLTHGLCDDVV 202 (257)
Q Consensus 171 ------------------------------~~~~~~~~-~~-----------------~~~~~~~~~P~l~~~G~~D~~v 202 (257)
.+...+.. .. ........+|+|++.|+.-+.
T Consensus 154 ~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~- 232 (283)
T PF03096_consen 154 SYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPH- 232 (283)
T ss_dssp --CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTT-
T ss_pred ccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcc-
Confidence 00000000 00 001123469999999998877
Q ss_pred cchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHh
Q 025121 203 PYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTAR 249 (257)
Q Consensus 203 ~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 249 (257)
.+.+.++..++... +.++..+++.|=.+..|.+..+.+-|.=+
T Consensus 233 -~~~vv~~ns~Ldp~---~ttllkv~dcGglV~eEqP~klaea~~lF 275 (283)
T PF03096_consen 233 -VDDVVEMNSKLDPT---KTTLLKVADCGGLVLEEQPGKLAEAFKLF 275 (283)
T ss_dssp -HHHHHHHHHHS-CC---CEEEEEETT-TT-HHHH-HHHHHHHHHHH
T ss_pred -hhhHHHHHhhcCcc---cceEEEecccCCcccccCcHHHHHHHHHH
Confidence 44577888888654 67999999998888877766655544433
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.6e-07 Score=71.63 Aligned_cols=122 Identities=17% Similarity=0.081 Sum_probs=77.3
Q ss_pred hhhHHHHHHHHHHHhccCCC----CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh--h
Q 025121 99 WEGLDASAAHIANLLSTEPA----DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN--L 172 (257)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~----~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~ 172 (257)
..........+.-+++.... .+.-+|.|.|+||.+++..+.+ +|..|..++..||.+...-. .
T Consensus 152 ~~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~-----------~Pe~FG~V~s~Sps~~~~~~~~~ 220 (299)
T COG2382 152 EAYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLR-----------HPERFGHVLSQSGSFWWTPLDTQ 220 (299)
T ss_pred HHHHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhc-----------CchhhceeeccCCccccCccccc
Confidence 33445555556666655432 2477999999999999999995 59999999999986542211 1
Q ss_pred hhccccchHHHhhhc---CCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC
Q 025121 173 RNKIEGSHEAARRAA---SLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV 235 (257)
Q Consensus 173 ~~~~~~~~~~~~~~~---~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 235 (257)
.+............+ ..-++...++.+.+.++ .+++++.+...+. +..+..|+| ||...
T Consensus 221 ~~~~~~~~l~~~~a~~~~~~~~l~~g~~~~~~~~p--Nr~L~~~L~~~g~-~~~yre~~G-gHdw~ 282 (299)
T COG2382 221 PQGEVAESLKILHAIGTDERIVLTTGGEEGDFLRP--NRALAAQLEKKGI-PYYYREYPG-GHDWA 282 (299)
T ss_pred cccchhhhhhhhhccCccceEEeecCCccccccch--hHHHHHHHHhcCC-cceeeecCC-CCchh
Confidence 110000001111111 22344444555555444 7889999999988 889999998 99754
|
|
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.78 E-value=5e-08 Score=80.51 Aligned_cols=214 Identities=18% Similarity=0.076 Sum_probs=134.9
Q ss_pred cccCCCCCceEEeCC-CCCCceEEEEEccCCCCcc--chHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCC
Q 025121 15 ARRTFEFGRTHVVRP-KGKHQATIVWLHGLGDNGS--SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGEL 91 (257)
Q Consensus 15 ~~~~~~~~~~~~~~~-~~~~~~~vi~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~ 91 (257)
+.++++++..++... ...+.|++|+--|.-+-+. .|......+-++|...+..+.||- |.-.+.|...+..
T Consensus 401 SkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGG------GEfGp~WH~Aa~k 474 (648)
T COG1505 401 SKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGG------GEFGPEWHQAGMK 474 (648)
T ss_pred cCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccC------CccCHHHHHHHhh
Confidence 346777887777622 1235667665444222221 255544555568888888898863 3333566544221
Q ss_pred CCCCCCchhhHHHHHHHHHHHhccCCC-CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch
Q 025121 92 SDDGPEDWEGLDASAAHIANLLSTEPA-DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR 170 (257)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 170 (257)
......+++.++.+.+++++... ++++++.|-|-||.++-..+.+. |+.+.++++-.|.+++.+
T Consensus 475 ----~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQr-----------PelfgA~v~evPllDMlR 539 (648)
T COG1505 475 ----ENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQR-----------PELFGAAVCEVPLLDMLR 539 (648)
T ss_pred ----hcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccC-----------hhhhCceeeccchhhhhh
Confidence 11234456666667777777543 46999999999999998888854 888888887666543321
Q ss_pred h---------------------hhhccccchHHHh--hhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEe
Q 025121 171 N---------------------LRNKIEGSHEAAR--RAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSF 227 (257)
Q Consensus 171 ~---------------------~~~~~~~~~~~~~--~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 227 (257)
. ........+..+. ...-.|+||..+..|.-|.+.++++++.+|++.+. ++-+.+-
T Consensus 540 Yh~l~aG~sW~~EYG~Pd~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~-pv~~~e~ 618 (648)
T COG1505 540 YHLLTAGSSWIAEYGNPDDPEDRAFLLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGA-PVLLREE 618 (648)
T ss_pred hcccccchhhHhhcCCCCCHHHHHHHHhcCchhcCCccccCCCeEEEcccccccccchHHHHHHHHHHhcCC-ceEEEee
Confidence 0 0000011111112 23347899999999999999999999999999986 5555555
Q ss_pred cCCCCccC------HHHHHHHHHHHHHhc
Q 025121 228 EGLGHYTV------PKEMDEVCNWLTARL 250 (257)
Q Consensus 228 ~g~~H~~~------~~~~~~~~~~l~~~l 250 (257)
-++||.-- .+....+..||.+.|
T Consensus 619 t~gGH~g~~~~~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 619 TKGGHGGAAPTAEIARELADLLAFLLRTL 647 (648)
T ss_pred cCCcccCCCChHHHHHHHHHHHHHHHHhh
Confidence 56799764 223456777777765
|
|
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.3e-07 Score=75.25 Aligned_cols=64 Identities=17% Similarity=0.161 Sum_probs=46.5
Q ss_pred HhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC---------HHHH----HHHHHHHHHh
Q 025121 183 ARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV---------PKEM----DEVCNWLTAR 249 (257)
Q Consensus 183 ~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~---------~~~~----~~~~~~l~~~ 249 (257)
....+++|++++.|++|.++|.+.+....+.+.. +++++..+ .||.-. .+.+ .+..+|+.+.
T Consensus 325 dL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~~g----~~~f~l~~-sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a 399 (445)
T COG3243 325 DLGDITCPVYNLAAEEDHIAPWSSVYLGARLLGG----EVTFVLSR-SGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGA 399 (445)
T ss_pred chhhcccceEEEeecccccCCHHHHHHHHHhcCC----ceEEEEec-CceEEEEeCCcchhhhhcCCCCcchHHHHHHhh
Confidence 3466899999999999999999888877777763 57888877 599432 1122 3777788764
Q ss_pred cC
Q 025121 250 LG 251 (257)
Q Consensus 250 l~ 251 (257)
-.
T Consensus 400 ~~ 401 (445)
T COG3243 400 KE 401 (445)
T ss_pred cc
Confidence 43
|
|
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.9e-07 Score=69.05 Aligned_cols=147 Identities=18% Similarity=0.149 Sum_probs=85.0
Q ss_pred CCceEEEEEccCCCCccch----HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSW----SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~----~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
+.+.++||+||+..+...- ..+...+...+ .++.+.+|..|. ...+ ..+.........
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~-~~i~FsWPS~g~-------~~~Y----------~~d~~~a~~s~~ 77 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPG-VVILFSWPSDGS-------LLGY----------FYDRESARFSGP 77 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCc-eEEEEEcCCCCC-------hhhh----------hhhhhhHHHHHH
Confidence 4567999999998876542 22334443334 788888874321 0010 011122223333
Q ss_pred HHHHHhcc---CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHh
Q 025121 108 HIANLLST---EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAAR 184 (257)
Q Consensus 108 ~~~~~~~~---~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 184 (257)
.+.+++.. .....+|.|++||||+.+.+..+......... .....++..+++.+|-++... +..... ..
T Consensus 78 ~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~--~~~~~~~~~viL~ApDid~d~-f~~~~~-----~~ 149 (233)
T PF05990_consen 78 ALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGER--PDVKARFDNVILAAPDIDNDV-FRSQLP-----DL 149 (233)
T ss_pred HHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccc--hhhHhhhheEEEECCCCCHHH-HHHHHH-----HH
Confidence 34444433 22335999999999999999988754221100 012347888898887666532 222221 22
Q ss_pred hhcCCCEEEEccCCCCcccc
Q 025121 185 RAASLPILLTHGLCDDVVPY 204 (257)
Q Consensus 185 ~~~~~P~l~~~G~~D~~v~~ 204 (257)
.....++.+.+..+|.....
T Consensus 150 ~~~~~~itvy~s~~D~AL~~ 169 (233)
T PF05990_consen 150 GSSARRITVYYSRNDRALKA 169 (233)
T ss_pred hhcCCCEEEEEcCCchHHHH
Confidence 33458999999999987654
|
|
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=98.73 E-value=4.3e-07 Score=72.50 Aligned_cols=40 Identities=23% Similarity=0.282 Sum_probs=35.7
Q ss_pred cCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEe
Q 025121 187 ASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSF 227 (257)
Q Consensus 187 ~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 227 (257)
.++-.+..|+..|..+|.+.-.++++.+++.|. +++++.+
T Consensus 292 ~~~~yvsYHs~~D~~~p~~~K~~l~~~l~~lgf-da~l~lI 331 (403)
T PF11144_consen 292 KKIIYVSYHSIKDDLAPAEDKEELYEILKNLGF-DATLHLI 331 (403)
T ss_pred cceEEEEEeccCCCCCCHHHHHHHHHHHHHcCC-CeEEEEe
Confidence 345577889999999999999999999999998 8888888
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.7e-08 Score=78.99 Aligned_cols=113 Identities=19% Similarity=0.240 Sum_probs=61.9
Q ss_pred CCceEEEEEccCCCCc--cchHH-Hhh-cCCC--CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025121 32 KHQATIVWLHGLGDNG--SSWSQ-LLE-SLPL--PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~--~~~~~-~~~-~l~~--~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
..+|++|++|||.++. ..|.. +.+ .+.. .++.|+++|+.. +. ...|.. .......+...
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~-------~a--~~~Y~~------a~~n~~~vg~~ 133 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSR-------GA--SNNYPQ------AVANTRLVGRQ 133 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HH-------HH--SS-HHH------HHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchh-------hc--cccccc------hhhhHHHHHHH
Confidence 4679999999999888 34543 444 3444 589999999431 00 000000 00011222333
Q ss_pred HHHHHHHhc-c-CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCccc--ccceEEEeccCCCCch
Q 025121 106 AAHIANLLS-T-EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYV--NLRAVVGLSGWLPGSR 170 (257)
Q Consensus 106 ~~~~~~~~~-~-~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~ 170 (257)
+..+...|. . ....+++.|+|||+||++|-.+..+. .. ++..+..+.|.-|..+
T Consensus 134 la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~-----------~~~~ki~rItgLDPAgP~F~ 191 (331)
T PF00151_consen 134 LAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYL-----------KGGGKIGRITGLDPAGPLFE 191 (331)
T ss_dssp HHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHT-----------TT---SSEEEEES-B-TTTT
T ss_pred HHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhc-----------cCcceeeEEEecCccccccc
Confidence 333333332 2 23446999999999999999999864 44 7999999988766544
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=98.64 E-value=3.6e-06 Score=63.91 Aligned_cols=180 Identities=15% Similarity=0.094 Sum_probs=114.3
Q ss_pred CceEEEEEccCCCCccc-hHHHh-----hcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025121 33 HQATIVWLHGLGDNGSS-WSQLL-----ESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~-~~~~~-----~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
++|++|-.|..|-+... |..+. ..+..+ +.++-+|.|||-.+... + +..-...++++.+
T Consensus 45 ~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~-------~-------p~~y~yPsmd~LA 109 (326)
T KOG2931|consen 45 NKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPS-------F-------PEGYPYPSMDDLA 109 (326)
T ss_pred CCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCcc-------C-------CCCCCCCCHHHHH
Confidence 57889999999987765 54432 333334 99999999987433110 0 1111245667777
Q ss_pred HHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch----------------
Q 025121 107 AHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR---------------- 170 (257)
Q Consensus 107 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------------- 170 (257)
+.+...++...-. .++-+|--.|+++-.++|..+ |+++.++|++++-.....
T Consensus 110 d~l~~VL~~f~lk-~vIg~GvGAGAyIL~rFAl~h-----------p~rV~GLvLIn~~~~a~gwiew~~~K~~s~~l~~ 177 (326)
T KOG2931|consen 110 DMLPEVLDHFGLK-SVIGMGVGAGAYILARFALNH-----------PERVLGLVLINCDPCAKGWIEWAYNKVSSNLLYY 177 (326)
T ss_pred HHHHHHHHhcCcc-eEEEecccccHHHHHHHHhcC-----------hhheeEEEEEecCCCCchHHHHHHHHHHHHHHHh
Confidence 7777777765544 888999999999999999954 999999999865211000
Q ss_pred -------------------------hhhhcc----c-----------------cch-HHHhh----hcCCCEEEEccCCC
Q 025121 171 -------------------------NLRNKI----E-----------------GSH-EAARR----AASLPILLTHGLCD 199 (257)
Q Consensus 171 -------------------------~~~~~~----~-----------------~~~-~~~~~----~~~~P~l~~~G~~D 199 (257)
.+.+.+ . +.. ..... ..++|+|++.|+.-
T Consensus 178 ~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~S 257 (326)
T KOG2931|consen 178 YGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDNS 257 (326)
T ss_pred hchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCCC
Confidence 000000 0 000 00001 23599999999988
Q ss_pred CcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHH
Q 025121 200 DVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCN 244 (257)
Q Consensus 200 ~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~ 244 (257)
+.+ +.+..+..++... +.++..+.+.|=.+..+.+..+.+
T Consensus 258 p~~--~~vv~~n~~Ldp~---~ttllk~~d~g~l~~e~qP~kl~e 297 (326)
T KOG2931|consen 258 PHV--SAVVECNSKLDPT---YTTLLKMADCGGLVQEEQPGKLAE 297 (326)
T ss_pred chh--hhhhhhhcccCcc---cceEEEEcccCCcccccCchHHHH
Confidence 764 3466677777654 678888888887776544444333
|
|
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.2e-05 Score=67.24 Aligned_cols=65 Identities=12% Similarity=0.124 Sum_probs=50.3
Q ss_pred CCCEEEEccCCCCcccchhhHHHHHHhhhc---------------------Cc----e-----eeEEEEecCCCCccCHH
Q 025121 188 SLPILLTHGLCDDVVPYKYGEKSANCLSIS---------------------GF----R-----HLTFKSFEGLGHYTVPK 237 (257)
Q Consensus 188 ~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~---------------------~~----~-----~~~~~~~~g~~H~~~~~ 237 (257)
.++||+.+|+.|-+|+.-..+.+.+.++-. |. . +.+++.+.++||++..+
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d 443 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMD 443 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChhh
Confidence 589999999999999998887777776511 11 2 46778888999999988
Q ss_pred HHHHHHHHHHHhcCc
Q 025121 238 EMDEVCNWLTARLGL 252 (257)
Q Consensus 238 ~~~~~~~~l~~~l~~ 252 (257)
.++.+.+.+.+++..
T Consensus 444 ~P~~~~~~i~~fl~~ 458 (462)
T PTZ00472 444 QPAVALTMINRFLRN 458 (462)
T ss_pred HHHHHHHHHHHHHcC
Confidence 887777777776653
|
|
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.5e-07 Score=76.53 Aligned_cols=120 Identities=17% Similarity=0.113 Sum_probs=76.5
Q ss_pred CCCCceEEEEEccCC---CCccchHHHhhcCCCCc-eEEEccCCCCCCcccCCCCcccccccCCCCC--CC--CCCchhh
Q 025121 30 KGKHQATIVWLHGLG---DNGSSWSQLLESLPLPN-IKWICPTAPTRPVAILGGFPCTAWFDVGELS--DD--GPEDWEG 101 (257)
Q Consensus 30 ~~~~~~~vi~~HG~~---~~~~~~~~~~~~l~~~g-~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~--~~--~~~~~~~ 101 (257)
..++.|++||+||.+ ++......-...|++.| +.||.+++|.--++. .+..... +. ......+
T Consensus 90 ~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGf---------L~~~~~~~~~~~~~n~Gl~D 160 (491)
T COG2272 90 PAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGF---------LDLSSLDTEDAFASNLGLLD 160 (491)
T ss_pred CCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCccccccee---------eehhhccccccccccccHHH
Confidence 345679999999965 33333222234555566 999999988533322 2221111 11 1134556
Q ss_pred HHHHHHHHHHHhccCCC-CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCC
Q 025121 102 LDASAAHIANLLSTEPA-DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP 167 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 167 (257)
....++++.+.|..... +++|.|+|+|.|++.++.+++.. .....+..+|+.||...
T Consensus 161 qilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P---------~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 161 QILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVP---------SAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCc---------cchHHHHHHHHhCCCCC
Confidence 66677778888877644 46999999999999999998742 33455677777777654
|
|
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.51 E-value=3.9e-07 Score=71.77 Aligned_cols=64 Identities=28% Similarity=0.449 Sum_probs=51.4
Q ss_pred hhhcC-CCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC----H---HHHHHHHHHHHHhc
Q 025121 184 RRAAS-LPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV----P---KEMDEVCNWLTARL 250 (257)
Q Consensus 184 ~~~~~-~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~----~---~~~~~~~~~l~~~l 250 (257)
...+. .|++++||.+|..||...+..+++..+.. +.+...+++++|... . +.+..+.+|+.+.+
T Consensus 227 ~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~---~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 227 AEKISPRPVLLVHGERDEVVPLRDAEDLYEAARER---PKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred HhhcCCcceEEEecCCCcccchhhhHHHHhhhccC---CceEEEecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 33444 79999999999999999999999999864 357788888899866 2 46788888888765
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=98.50 E-value=3.1e-07 Score=69.00 Aligned_cols=87 Identities=21% Similarity=0.338 Sum_probs=50.6
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCC--ce---EEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhH----
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLPLP--NI---KWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGL---- 102 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~--g~---~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~---- 102 (257)
++...|||+||+.++..+|..+...+... .+ .++..- + .........++
T Consensus 2 ~~~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~-----------------~-----~~n~~~T~~gI~~~g 59 (217)
T PF05057_consen 2 KPVHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLG-----------------Y-----SNNEFKTFDGIDVCG 59 (217)
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhc-----------------c-----cccccccchhhHHHH
Confidence 45669999999999999988766665421 11 111110 0 00011112223
Q ss_pred HHHHHHHHHHhccCCCC-ceEEEEEechhHHHHHHHHHh
Q 025121 103 DASAAHIANLLSTEPAD-VKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
...++.+.+.++..... .+|.++||||||.++-.++..
T Consensus 60 ~rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~~ 98 (217)
T PF05057_consen 60 ERLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALGL 98 (217)
T ss_pred HHHHHHHHHhccccccccccceEEEecccHHHHHHHHHH
Confidence 33444555555443332 489999999999999777664
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.6e-06 Score=73.60 Aligned_cols=116 Identities=18% Similarity=0.146 Sum_probs=70.1
Q ss_pred CCCceEEEEEccCCC---Cccc--hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025121 31 GKHQATIVWLHGLGD---NGSS--WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~---~~~~--~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
+++.|+||++||.+- +... ...++.... ++.|+.+++|.-..+... .............+....
T Consensus 92 ~~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~--~~~vv~~~yRlg~~g~~~---------~~~~~~~~n~g~~D~~~a 160 (493)
T cd00312 92 GNSLPVMVWIHGGGFMFGSGSLYPGDGLAREGD--NVIVVSINYRLGVLGFLS---------TGDIELPGNYGLKDQRLA 160 (493)
T ss_pred CCCCCEEEEEcCCccccCCCCCCChHHHHhcCC--CEEEEEeccccccccccc---------CCCCCCCcchhHHHHHHH
Confidence 356799999999542 2222 223333221 599999998742222111 011111122234556666
Q ss_pred HHHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCC
Q 025121 106 AAHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWL 166 (257)
Q Consensus 106 ~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 166 (257)
++++.+.+... .+.++|.|+|+|.||..+..++... ..+..+.++|+.||..
T Consensus 161 l~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~---------~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 161 LKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSP---------DSKGLFHRAISQSGSA 213 (493)
T ss_pred HHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCc---------chhHHHHHHhhhcCCc
Confidence 77777777664 3456999999999999999888742 2245677888777643
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=98.48 E-value=4.4e-08 Score=72.80 Aligned_cols=87 Identities=24% Similarity=0.260 Sum_probs=47.4
Q ss_pred eEEEEEccCCC-CccchHHHhhcCCCCceE---EEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025121 35 ATIVWLHGLGD-NGSSWSQLLESLPLPNIK---WICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 35 ~~vi~~HG~~~-~~~~~~~~~~~l~~~g~~---v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
.+|||+||.++ ....|..+.+.|.++||. ++++++-..... . .........+.+..+.
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~--------~----------~~~~~~~~~~~~~~l~ 63 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGS--------P----------SVQNAHMSCESAKQLR 63 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHH--------T----------HHHHHHB-HHHHHHHH
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCC--------C----------cccccccchhhHHHHH
Confidence 37999999998 567899999999989998 788874311000 0 0000000112223333
Q ss_pred HHhc---cCCCCceEEEEEechhHHHHHHHHHh
Q 025121 111 NLLS---TEPADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 111 ~~~~---~~~~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
.+++ ..... +|-|+||||||.++-.+...
T Consensus 64 ~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 64 AFIDAVLAYTGA-KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp HHHHHHHHHHT---EEEEEETCHHHHHHHHHHH
T ss_pred HHHHHHHHhhCC-EEEEEEcCCcCHHHHHHHHH
Confidence 3332 23445 99999999999999988864
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.1e-06 Score=66.87 Aligned_cols=104 Identities=20% Similarity=0.200 Sum_probs=75.1
Q ss_pred eEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhc
Q 025121 35 ATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLS 114 (257)
Q Consensus 35 ~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (257)
|+|+++|+.++....|..++..|. ....++..+.|+-+. ......+++++++...+.|.
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~-~~~~v~~l~a~g~~~--------------------~~~~~~~l~~~a~~yv~~Ir 59 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALG-PLLPVYGLQAPGYGA--------------------GEQPFASLDDMAAAYVAAIR 59 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhc-cCceeeccccCcccc--------------------cccccCCHHHHHHHHHHHHH
Confidence 579999999999999999999997 458888888774210 11224456677777777776
Q ss_pred cCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCC
Q 025121 115 TEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP 167 (257)
Q Consensus 115 ~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 167 (257)
+..+..++.|+|+|+||.+|..+|.+.... -..++.++.+..+.+
T Consensus 60 ~~QP~GPy~L~G~S~GG~vA~evA~qL~~~--------G~~Va~L~llD~~~~ 104 (257)
T COG3319 60 RVQPEGPYVLLGWSLGGAVAFEVAAQLEAQ--------GEEVAFLGLLDAVPP 104 (257)
T ss_pred HhCCCCCEEEEeeccccHHHHHHHHHHHhC--------CCeEEEEEEeccCCC
Confidence 666666999999999999999999875211 234566666655444
|
|
| >smart00824 PKS_TE Thioesterase | Back alignment and domain information |
|---|
Probab=98.40 E-value=4.2e-06 Score=62.38 Aligned_cols=175 Identities=15% Similarity=0.087 Sum_probs=93.3
Q ss_pred EEccCC--CCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhccC
Q 025121 39 WLHGLG--DNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTE 116 (257)
Q Consensus 39 ~~HG~~--~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (257)
++|..+ ++...|..+...+. ..+.++.++.++++.+. ... ..+...+..+...+...
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~-~~~~v~~~~~~g~~~~~-----------------~~~---~~~~~~~~~~~~~l~~~ 60 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALR-GRRDVSALPLPGFGPGE-----------------PLP---ASADALVEAQAEAVLRA 60 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcC-CCccEEEecCCCCCCCC-----------------CCC---CCHHHHHHHHHHHHHHh
Confidence 344544 56667889999997 57899999988643110 011 12233333333333332
Q ss_pred CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh-------hhh----------cccc-
Q 025121 117 PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN-------LRN----------KIEG- 178 (257)
Q Consensus 117 ~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------~~~----------~~~~- 178 (257)
....++.++|||+||.++..++.+... ....+.+++.+....+.... +.. ....
T Consensus 61 ~~~~~~~l~g~s~Gg~~a~~~a~~l~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (212)
T smart00824 61 AGGRPFVLVGHSSGGLLAHAVAARLEA--------RGIPPAAVVLLDTYPPGDPAPEGWLPELLRGVFEREDSFVPMDDA 132 (212)
T ss_pred cCCCCeEEEEECHHHHHHHHHHHHHHh--------CCCCCcEEEEEccCCCCCccchhhHHHHHHHHHhhhcccccccch
Confidence 223489999999999999998885321 12346666655443322110 000 0000
Q ss_pred ----ch-------HHHhhhcCCCEEEEccCCCCcc-cchhhHHHHHHhhhcCceeeEEEEecCCCCccC-HHHHHHHHHH
Q 025121 179 ----SH-------EAARRAASLPILLTHGLCDDVV-PYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-PKEMDEVCNW 245 (257)
Q Consensus 179 ----~~-------~~~~~~~~~P~l~~~G~~D~~v-~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~~ 245 (257)
.. .........|+.++.+++|... +.+....+.+... ...+.+.++| +|... .+....+.+-
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~----~~~~~~~~~g-~H~~~~~~~~~~~~~~ 207 (212)
T smart00824 133 RLTAMGAYLRLFGGWTPGPVAAPTLLVRASEPLAEWPDEDPDGWRAHWP----LPHTVVDVPG-DHFTMMEEHAAATARA 207 (212)
T ss_pred hhhHHHHHHHHhccCCCCCCCCCEEEEeccCCCCCCCCCCcccccCCCC----CCceeEEccC-chHHHHHHhHHHHHHH
Confidence 00 0012235679999999988654 2222222222211 1578889996 88765 3444444444
Q ss_pred HH
Q 025121 246 LT 247 (257)
Q Consensus 246 l~ 247 (257)
+.
T Consensus 208 ~~ 209 (212)
T smart00824 208 VH 209 (212)
T ss_pred HH
Confidence 43
|
Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. |
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.1e-05 Score=61.86 Aligned_cols=186 Identities=17% Similarity=0.156 Sum_probs=109.5
Q ss_pred EEEEccCC-CCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhcc
Q 025121 37 IVWLHGLG-DNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLST 115 (257)
Q Consensus 37 vi~~HG~~-~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (257)
+|++=||. ..........+...+.|+.++.+-.+.. ..+. ....+...++.+.+.+.+
T Consensus 2 lvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~-----------~~~~----------~~~~~~~~~~~l~~~l~~ 60 (240)
T PF05705_consen 2 LVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPA-----------DFFW----------PSKRLAPAADKLLELLSD 60 (240)
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHH-----------HHee----------eccchHHHHHHHHHHhhh
Confidence 34444554 4444455555555558999998875421 0000 013445556666666665
Q ss_pred CCCC--ceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCC---------------CCchh-----hh
Q 025121 116 EPAD--VKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWL---------------PGSRN-----LR 173 (257)
Q Consensus 116 ~~~~--~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---------------~~~~~-----~~ 173 (257)
.... .++.+-.+|.||...+..+...-..... .....++++++|.=|.+- +.... ..
T Consensus 61 ~~~~~~~~il~H~FSnGG~~~~~~l~~~~~~~~~-~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (240)
T PF05705_consen 61 SQSASPPPILFHSFSNGGSFLYSQLLEAYQSRKK-FGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLW 139 (240)
T ss_pred hccCCCCCEEEEEEECchHHHHHHHHHHHHhccc-ccccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHH
Confidence 4333 2899999999888877776521110000 011234477777555431 11100 00
Q ss_pred hc----c------------cc--------chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecC
Q 025121 174 NK----I------------EG--------SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEG 229 (257)
Q Consensus 174 ~~----~------------~~--------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g 229 (257)
.. + .. ..........+|-++++++.|.+++.+..++..+..++.|. +++...+++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~-~V~~~~f~~ 218 (240)
T PF05705_consen 140 PLLQFLLRLSIISYFIFGYPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGW-DVRAEKFED 218 (240)
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCC-eEEEecCCC
Confidence 00 0 00 00012233468999999999999999999999999999988 799999999
Q ss_pred CCCccC-----HHHHHHHHHH
Q 025121 230 LGHYTV-----PKEMDEVCNW 245 (257)
Q Consensus 230 ~~H~~~-----~~~~~~~~~~ 245 (257)
..|-.+ .+.++.+.+|
T Consensus 219 S~HV~H~r~~p~~Y~~~v~~f 239 (240)
T PF05705_consen 219 SPHVAHLRKHPDRYWRAVDEF 239 (240)
T ss_pred CchhhhcccCHHHHHHHHHhh
Confidence 999765 3345556555
|
|
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.39 E-value=2.6e-05 Score=59.03 Aligned_cols=127 Identities=17% Similarity=0.118 Sum_probs=73.4
Q ss_pred HHHHHHHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhh-ccccchH
Q 025121 105 SAAHIANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN-KIEGSHE 181 (257)
Q Consensus 105 ~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~ 181 (257)
..+.+.-++++. .+.++..++|||+||.+++..+. .+|+.+...+++||-+...+...- ......
T Consensus 120 L~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL-----------~~p~~F~~y~~~SPSlWw~n~~~l~~~~~~~- 187 (264)
T COG2819 120 LTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALL-----------TYPDCFGRYGLISPSLWWHNEAILREIESLK- 187 (264)
T ss_pred HHHhhHHHHhcccccCcccceeeeecchhHHHHHHHh-----------cCcchhceeeeecchhhhCCHHHhccccccc-
Confidence 344455555553 23357999999999999999998 458999999999985543332221 111111
Q ss_pred HHhhhcCCCEEEEccCC--CC---cccch---hhHHHHHHhhh-cCceeeEEEEecCCCCccC-HHHHHHHHHHHH
Q 025121 182 AARRAASLPILLTHGLC--DD---VVPYK---YGEKSANCLSI-SGFRHLTFKSFEGLGHYTV-PKEMDEVCNWLT 247 (257)
Q Consensus 182 ~~~~~~~~P~l~~~G~~--D~---~v~~~---~~~~~~~~l~~-~~~~~~~~~~~~g~~H~~~-~~~~~~~~~~l~ 247 (257)
... ..++.+.-|.. |. ....+ .+.+..+.+.. .+. .+.+..+++.+|.-. ...+...+.|+.
T Consensus 188 --~~~-~~~i~l~iG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~f~~~~~~~H~~~~~~~~~~al~~l~ 259 (264)
T COG2819 188 --LLK-TKRICLYIGSGELDSSRSIRMAENKQEAAELSSLLEKRTGA-RLVFQEEPLEHHGSVIHASLPSALRFLD 259 (264)
T ss_pred --cCC-CcceEEEecccccCcchhhhhhhHHHHHHHHHHHHhhccCC-ceEecccccccccchHHHHHHHHHHhhh
Confidence 111 44555554443 33 22222 23334444444 444 678888898788654 444556666654
|
|
| >COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=98.37 E-value=9.1e-06 Score=64.45 Aligned_cols=185 Identities=13% Similarity=0.109 Sum_probs=104.5
Q ss_pred CCCceEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCch
Q 025121 20 EFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDW 99 (257)
Q Consensus 20 ~~~~~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~ 99 (257)
.++..-+....++..-.-||+.|=|+..+.-+.+.+.|.++|+.|+.+|... .-| .....
T Consensus 246 aLPV~e~~a~~~~sd~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLR-----------YfW---------~~rtP 305 (456)
T COG3946 246 ALPVVEVPAKPGNSDTVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLR-----------YFW---------SERTP 305 (456)
T ss_pred CCCceeeccCCCCcceEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhh-----------hhh---------ccCCH
Confidence 3343333333334455778888888887777889999999999999999431 122 12335
Q ss_pred hhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCC-----CCCcccccceEEEeccCCCCchhhhh
Q 025121 100 EGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGN-----GIPYYVNLRAVVGLSGWLPGSRNLRN 174 (257)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~ 174 (257)
+.+..+...+.++........++.|+|+|+|+=+--....+.+...-.. -.........-+.+.+|+.....-.
T Consensus 306 e~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L~~~~r~~v~~~~ll~l~~~~~fe~~v~gWlg~~~~g~- 384 (456)
T COG3946 306 EQIAADLSRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRLPPATRQRVRMVSLLGLGRTADFEISVEGWLGMAGEGA- 384 (456)
T ss_pred HHHHHHHHHHHHHHHHhhCcceEEEEeecccchhhHHHHHhCCHHHHHHHHHHHHHhccccceEEEEEeeeeccCCcCC-
Confidence 5666666666666666555569999999999987766655432100000 0000111222234455554332211
Q ss_pred ccccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHH
Q 025121 175 KIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKE 238 (257)
Q Consensus 175 ~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~ 238 (257)
........+.....+.+|+|.+|+-.. +-.++.. ..+.+.+|| ||.|..+.
T Consensus 385 --~~~~~~~~~l~~~~v~CiYG~~e~d~~-------Cp~l~~~---~~~~v~lpG-gHHFd~dy 435 (456)
T COG3946 385 --GDVVPDIAKLPLARVQCIYGQEEKDTA-------CPSLKAK---GVDTVKLPG-GHHFDGDY 435 (456)
T ss_pred --CCcchhhhhCCcceeEEEecCcccccc-------CCcchhh---cceeEecCC-CcccCccH
Confidence 001111223345679999998765322 1122232 568899997 77776544
|
|
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=98.35 E-value=8.9e-06 Score=65.13 Aligned_cols=212 Identities=13% Similarity=0.113 Sum_probs=127.9
Q ss_pred EEeCCC-CCCceEEEEEccCCCC------ccchHHHhhcCC--CCceEEEccCCCCCCcccCC-CCcc-------ccccc
Q 025121 25 HVVRPK-GKHQATIVWLHGLGDN------GSSWSQLLESLP--LPNIKWICPTAPTRPVAILG-GFPC-------TAWFD 87 (257)
Q Consensus 25 ~~~~~~-~~~~~~vi~~HG~~~~------~~~~~~~~~~l~--~~g~~v~~~d~~~~g~~~~~-g~~~-------~~w~~ 87 (257)
++++.. ..+...+|++.|.... .......+..++ ..-..++..+-|.++....+ +... ..|-.
T Consensus 54 I~vP~~~~~~~~all~i~gG~~~~~~~~~~~~~~~~~~~~A~~t~siv~~l~qvPNQpl~f~~d~~~r~ED~iIAytW~~ 133 (367)
T PF10142_consen 54 IYVPKNDKNPDTALLFITGGSNRNWPGPPPDFDDELLQMIARATGSIVAILYQVPNQPLTFDNDPKPRTEDAIIAYTWRK 133 (367)
T ss_pred EEECCCCCCCceEEEEEECCcccCCCCCCCcchHHHHHHHHHhcCCEEEEeCcCCCCCeEeCCCCccccHHHHHHHHHHH
Confidence 444444 5667799999986511 111223334333 23445555567766654322 1111 12322
Q ss_pred CCC-CCCCCCCch---hhHHHHHHHHHHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEE
Q 025121 88 VGE-LSDDGPEDW---EGLDASAAHIANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVG 161 (257)
Q Consensus 88 ~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~ 161 (257)
+-. ....-+... ......++.+.+++++. ..-++++|.|.|==|+.++..++. ++||.+++-
T Consensus 134 fl~~~d~~w~l~~PMtka~vrAMD~vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa~------------D~RV~aivP 201 (367)
T PF10142_consen 134 FLETGDPEWPLHLPMTKAAVRAMDAVQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAAV------------DPRVKAIVP 201 (367)
T ss_pred HhccCCccchhhhhHHHHHHHHHHHHHHHHHhhcCCCccEEEEeCCchHhHHHHHhhcc------------CcceeEEee
Confidence 211 111111112 23444556666676654 123599999999999999999984 688888875
Q ss_pred ecc-CCCCchhhhhcc-----------------------c----------cchHHHhhhcCCCEEEEccCCCCcccchhh
Q 025121 162 LSG-WLPGSRNLRNKI-----------------------E----------GSHEAARRAASLPILLTHGLCDDVVPYKYG 207 (257)
Q Consensus 162 ~~~-~~~~~~~~~~~~-----------------------~----------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~ 207 (257)
+.- .+.....+...+ . ..+.......+.|-+++.|..|++..++..
T Consensus 202 ~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~~L~~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~ 281 (367)
T PF10142_consen 202 IVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEFDKLMQIVDPYSYRDRLTMPKYIINATGDEFFVPDSS 281 (367)
T ss_pred EEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchhhcCCHHHHHHHHhcCHHHHHHhcCccEEEEecCCCceeccCch
Confidence 431 111111111100 0 011223345699999999999999999999
Q ss_pred HHHHHHhhhcCceeeEEEEecCCCCccC-HHHHHHHHHHHHHhcCc
Q 025121 208 EKSANCLSISGFRHLTFKSFEGLGHYTV-PKEMDEVCNWLTARLGL 252 (257)
Q Consensus 208 ~~~~~~l~~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~~l~~~l~~ 252 (257)
.-+++.|+. +..+..+|+++|... .+..+.+..|+...+..
T Consensus 282 ~~y~d~L~G----~K~lr~vPN~~H~~~~~~~~~~l~~f~~~~~~~ 323 (367)
T PF10142_consen 282 NFYYDKLPG----EKYLRYVPNAGHSLIGSDVVQSLRAFYNRIQNG 323 (367)
T ss_pred HHHHhhCCC----CeeEEeCCCCCcccchHHHHHHHHHHHHHHHcC
Confidence 999999995 568999999999987 55678888898886554
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=98.32 E-value=2.1e-06 Score=73.64 Aligned_cols=115 Identities=14% Similarity=0.056 Sum_probs=67.9
Q ss_pred CceEEEEEccCCCCcc----chHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCC-CCCchhhHHHHHH
Q 025121 33 HQATIVWLHGLGDNGS----SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDD-GPEDWEGLDASAA 107 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~----~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~-~~~~~~~~~~~~~ 107 (257)
+.|++||+||.+-... ....-...++..+..||.+++|.-.++. ......... ......+...+++
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gf---------l~~~~~~~~~gN~Gl~Dq~~AL~ 194 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGF---------LSLGDLDAPSGNYGLLDQRLALK 194 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH----------BSSSTTSHBSTHHHHHHHHHHH
T ss_pred ccceEEEeecccccCCCcccccccccccccCCCEEEEEeccccccccc---------ccccccccCchhhhhhhhHHHHH
Confidence 5799999999553221 1122222334579999999987532221 211111111 2333456666777
Q ss_pred HHHHHhccCCC-CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025121 108 HIANLLSTEPA-DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 108 ~~~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
++.+.|..... +++|.|+|+|.||..+..++... .....+.++|+.||.
T Consensus 195 WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp---------~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 195 WVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSP---------SSKGLFHRAILQSGS 244 (535)
T ss_dssp HHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGG---------GGTTSBSEEEEES--
T ss_pred HHHhhhhhcccCCcceeeeeecccccccceeeecc---------ccccccccccccccc
Confidence 88888887654 46999999999999999888752 225679999999883
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=98.28 E-value=0.00011 Score=60.62 Aligned_cols=50 Identities=18% Similarity=0.317 Sum_probs=35.7
Q ss_pred HhhhcCCCEEEEccCCCCcccchhhHHH-------HHHhhhcCceeeEEEEecCCCCc
Q 025121 183 ARRAASLPILLTHGLCDDVVPYKYGEKS-------ANCLSISGFRHLTFKSFEGLGHY 233 (257)
Q Consensus 183 ~~~~~~~P~l~~~G~~D~~v~~~~~~~~-------~~~l~~~~~~~~~~~~~~g~~H~ 233 (257)
..+.+.+|++++.+..|.++|++++..+ .+.++..|. .+-+.+-+..||.
T Consensus 292 DLr~Ir~Piivfas~gDnITPP~QaL~WI~dlY~~~~ei~a~gQ-~IVY~~h~~vGHL 348 (581)
T PF11339_consen 292 DLRNIRSPIIVFASYGDNITPPQQALNWIPDLYPDTEEIKAAGQ-TIVYLLHESVGHL 348 (581)
T ss_pred ehhhCCCCEEEEeccCCCCCChhHhccchHhhcCCHHHHHhCCC-EEEEEecCCCCce
Confidence 4577899999999999999999988433 344444443 3344455778995
|
Their function is unknown. |
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.26 E-value=2.2e-05 Score=65.17 Aligned_cols=64 Identities=22% Similarity=0.294 Sum_probs=46.6
Q ss_pred CCCEEEEccCCCCcccchhhHHHHHHhhhcCc---------------------eeeEEEEecCCCCccCHHHHHHHHHHH
Q 025121 188 SLPILLTHGLCDDVVPYKYGEKSANCLSISGF---------------------RHLTFKSFEGLGHYTVPKEMDEVCNWL 246 (257)
Q Consensus 188 ~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~---------------------~~~~~~~~~g~~H~~~~~~~~~~~~~l 246 (257)
..+||+.+|..|-+||.-..+.+.+.+.-.+. .+.+++.+.++||.+..+.++.+.+.|
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~ 409 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQMF 409 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHHH
Confidence 49999999999999999888888888753211 146788999999999988888777777
Q ss_pred HHhcC
Q 025121 247 TARLG 251 (257)
Q Consensus 247 ~~~l~ 251 (257)
++++.
T Consensus 410 ~~fl~ 414 (415)
T PF00450_consen 410 RRFLK 414 (415)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 77664
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.22 E-value=7.3e-05 Score=54.66 Aligned_cols=87 Identities=21% Similarity=0.245 Sum_probs=56.1
Q ss_pred CceEEEEEccCCCCccc---hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSS---WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~---~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
.+..|||+-|.+.---. -..+.+.|.+.+|..+.+..+.+ +.|+++. .+.++++++
T Consensus 35 ~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ss----y~G~Gt~-----------------slk~D~edl 93 (299)
T KOG4840|consen 35 ESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSS----YNGYGTF-----------------SLKDDVEDL 93 (299)
T ss_pred eEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccc----ccccccc-----------------cccccHHHH
Confidence 34689999998865432 34577888889999999986632 2222211 123333444
Q ss_pred HHHhcc---CCCCceEEEEEechhHHHHHHHHHh
Q 025121 110 ANLLST---EPADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 110 ~~~~~~---~~~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
..++++ .....+|+|+|||-|+.-.+.++.+
T Consensus 94 ~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTn 127 (299)
T KOG4840|consen 94 KCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTN 127 (299)
T ss_pred HHHHHHhhccCcccceEEEecCccchHHHHHHHh
Confidence 444432 2223499999999999999988853
|
|
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=98.22 E-value=9.1e-05 Score=57.43 Aligned_cols=99 Identities=21% Similarity=0.299 Sum_probs=55.7
Q ss_pred eEEEEEccCCCCccc-----hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 35 ATIVWLHGLGDNGSS-----WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 35 ~~vi~~HG~~~~~~~-----~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
.+||+.||+|.+..+ +..+++.+ .|.-+.++..- .+ ...+|+ ..-.++++..++.+
T Consensus 26 ~P~ViwHG~GD~c~~~g~~~~~~l~~~~--~g~~~~~i~ig-------~~-~~~s~~---------~~~~~Qve~vce~l 86 (314)
T PLN02633 26 VPFIMLHGIGTQCSDATNANFTQLLTNL--SGSPGFCLEIG-------NG-VGDSWL---------MPLTQQAEIACEKV 86 (314)
T ss_pred CCeEEecCCCcccCCchHHHHHHHHHhC--CCCceEEEEEC-------CC-ccccce---------eCHHHHHHHHHHHH
Confidence 368899999987664 33344333 34444444310 01 111221 11244555555555
Q ss_pred HHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEecc
Q 025121 110 ANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG 164 (257)
Q Consensus 110 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 164 (257)
.. .... . +-+.++|+|+||.++=.++.+.+. .+.+.-+|.+++
T Consensus 87 ~~-~~~l-~-~G~naIGfSQGGlflRa~ierc~~---------~p~V~nlISlgg 129 (314)
T PLN02633 87 KQ-MKEL-S-QGYNIVGRSQGNLVARGLIEFCDG---------GPPVYNYISLAG 129 (314)
T ss_pred hh-chhh-h-CcEEEEEEccchHHHHHHHHHCCC---------CCCcceEEEecC
Confidence 44 2222 2 269999999999999999987521 134666666654
|
|
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=98.17 E-value=0.0002 Score=56.10 Aligned_cols=195 Identities=13% Similarity=0.039 Sum_probs=104.2
Q ss_pred CCCCCceEEEEEccCCCCccch-------HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhh
Q 025121 29 PKGKHQATIVWLHGLGDNGSSW-------SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEG 101 (257)
Q Consensus 29 ~~~~~~~~vi~~HG~~~~~~~~-------~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 101 (257)
+..++...||+.-|.++..+.. ..+.+.....+.+|+.+++||-|.+ .| .....+
T Consensus 132 ~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S--~G----------------~~s~~d 193 (365)
T PF05677_consen 132 PEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSS--TG----------------PPSRKD 193 (365)
T ss_pred CCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccC--CC----------------CCCHHH
Confidence 4445667999999988776651 1122222246899999998853322 22 112466
Q ss_pred HHHHHHHHHHHhcc-C--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEe-ccCCCCchhhhhcc-
Q 025121 102 LDASAAHIANLLST-E--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGL-SGWLPGSRNLRNKI- 176 (257)
Q Consensus 102 ~~~~~~~~~~~~~~-~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~- 176 (257)
+..+..++.+++.+ . ...++|++.|||+||.++...+...... ..+.++-++.- .++-..........
T Consensus 194 Lv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~-------~~dgi~~~~ikDRsfssl~~vas~~~~ 266 (365)
T PF05677_consen 194 LVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVLK-------GSDGIRWFLIKDRSFSSLAAVASQFFG 266 (365)
T ss_pred HHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcccc-------cCCCeeEEEEecCCcchHHHHHHHHHH
Confidence 66667777776654 2 2346999999999999999877643110 12223323222 22222111111111
Q ss_pred ----------c--cchHHHhhhcCCCEEEEccCC-------CCcccchhhHHHHHHhhhcCc-----eeeEEEEecCCCC
Q 025121 177 ----------E--GSHEAARRAASLPILLTHGLC-------DDVVPYKYGEKSANCLSISGF-----RHLTFKSFEGLGH 232 (257)
Q Consensus 177 ----------~--~~~~~~~~~~~~P~l~~~G~~-------D~~v~~~~~~~~~~~l~~~~~-----~~~~~~~~~g~~H 232 (257)
. -..........+|=+++++.+ |..++.+.+ ++..+.+... .+..++.-....|
T Consensus 267 ~~~~~l~~l~gWnidS~K~s~~l~cpeIii~~~d~~~~~i~Dgl~~~~~~--lA~~~l~~~~~~~~~~~Ki~i~~~~l~H 344 (365)
T PF05677_consen 267 PIGKLLIKLLGWNIDSAKNSEKLQCPEIIIYGVDSRSQLIGDGLFEPENC--LAAAFLDPPTAEKLSGKKIPIGERLLLH 344 (365)
T ss_pred HHHHHHHHHhccCCCchhhhccCCCCeEEEeccccchhhcccccCCcchh--hHHHhcCCcccccccccceecccccccc
Confidence 0 112223445679999999874 444444333 4444443210 0223444444566
Q ss_pred ccC--HHHHHHHHHHHHHhc
Q 025121 233 YTV--PKEMDEVCNWLTARL 250 (257)
Q Consensus 233 ~~~--~~~~~~~~~~l~~~l 250 (257)
.-. .+..+.+..-+.+.+
T Consensus 345 ~~~L~~~~~~~la~~I~~~~ 364 (365)
T PF05677_consen 345 NEPLDDETIQALAEHILDHF 364 (365)
T ss_pred cccCChHHHHHHHHHHHhhc
Confidence 533 445666666666544
|
|
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.15 E-value=1e-05 Score=64.91 Aligned_cols=102 Identities=22% Similarity=0.113 Sum_probs=68.3
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceE---EEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIK---WICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~---v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
.-+++++||++.+...|..+...+...|+. +..++.++. ...........+....+.
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--------------------~~~~~~~~~~~ql~~~V~ 118 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGG--------------------DGTYSLAVRGEQLFAYVD 118 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcchHHHhccccccccccc--------------------CCCccccccHHHHHHHHH
Confidence 448999999998988898888777767776 666664421 001111223344455555
Q ss_pred HHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025121 111 NLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 111 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
+.+..... .++.|+||||||.++..++... ..+.+++.++.+++.
T Consensus 119 ~~l~~~ga-~~v~LigHS~GG~~~ry~~~~~---------~~~~~V~~~~tl~tp 163 (336)
T COG1075 119 EVLAKTGA-KKVNLIGHSMGGLDSRYYLGVL---------GGANRVASVVTLGTP 163 (336)
T ss_pred HHHhhcCC-CceEEEeecccchhhHHHHhhc---------CccceEEEEEEeccC
Confidence 55544433 3999999999999999888754 223678888877664
|
|
| >KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=98.15 E-value=7.9e-06 Score=69.89 Aligned_cols=152 Identities=16% Similarity=0.101 Sum_probs=77.6
Q ss_pred ceEEEEEccCCCCccchHHHhhcCC----------------CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCC
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLP----------------LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPE 97 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~----------------~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~ 97 (257)
.-+|+|++|..|+...-+.++.... ...++.+++|.-+. +.. ..+..-.+
T Consensus 89 GIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe-------------~tA-m~G~~l~d 154 (973)
T KOG3724|consen 89 GIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE-------------FTA-MHGHILLD 154 (973)
T ss_pred CceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch-------------hhh-hccHhHHH
Confidence 4589999999988877665444322 12334444442110 000 00000112
Q ss_pred chhhHHHHHHHHHHHhcc--CCC---CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEecc-----CCC
Q 025121 98 DWEGLDASAAHIANLLST--EPA---DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG-----WLP 167 (257)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~--~~~---~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----~~~ 167 (257)
+.+-+.+++..+.++.+. +.. +..|+++||||||.+|..++.... ..+..+.-++..+. .++
T Consensus 155 QtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn--------~~~~sVntIITlssPH~a~Pl~ 226 (973)
T KOG3724|consen 155 QTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKN--------EVQGSVNTIITLSSPHAAPPLP 226 (973)
T ss_pred HHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhh--------hccchhhhhhhhcCcccCCCCC
Confidence 334455556666666655 222 346999999999999999887410 11333444444433 344
Q ss_pred CchhhhhccccchHHH---hh------hcCC-CEEEEccCCCCcccchhh
Q 025121 168 GSRNLRNKIEGSHEAA---RR------AASL-PILLTHGLCDDVVPYKYG 207 (257)
Q Consensus 168 ~~~~~~~~~~~~~~~~---~~------~~~~-P~l~~~G~~D~~v~~~~~ 207 (257)
....+.+.+....... .. ...+ =+-+.-|-.|..||.+..
T Consensus 227 ~D~~l~~fy~~vnn~W~k~~~~~~~~~ls~V~vVSisGG~~Dy~V~se~s 276 (973)
T KOG3724|consen 227 LDRFLLRFYLLVNNYWNKLQNNNSDPLLSHVGVVSISGGIRDYQVPSELS 276 (973)
T ss_pred CcHHHHHHHHHHHHHHHHHHhccccchhcceEEEEEecCccccccCcchh
Confidence 4444433332211111 11 1222 234445778999887654
|
|
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=98.11 E-value=7.3e-06 Score=67.61 Aligned_cols=96 Identities=15% Similarity=0.038 Sum_probs=57.6
Q ss_pred CCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhccCCCCceEEE
Q 025121 45 DNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPADVKVGI 124 (257)
Q Consensus 45 ~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l 124 (257)
.....|..+++.|.+.||.+ ..|+++.|+ +.+.. ......+.+....+.++.+.... .++.|
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gY------------DwR~~----~~~~~~~~~Lk~lIe~~~~~~g~-~kV~L 166 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGY------------DFRQS----NRLPETMDGLKKKLETVYKASGG-KKVNI 166 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCC------------Ccccc----ccHHHHHHHHHHHHHHHHHHcCC-CCEEE
Confidence 34466888999999888865 678776542 21110 00112233333344444433333 49999
Q ss_pred EEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025121 125 GGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 125 ~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
+||||||.++..++.+.+. .....++.+|.+++.
T Consensus 167 VGHSMGGlva~~fl~~~p~-------~~~k~I~~~I~la~P 200 (440)
T PLN02733 167 ISHSMGGLLVKCFMSLHSD-------VFEKYVNSWIAIAAP 200 (440)
T ss_pred EEECHhHHHHHHHHHHCCH-------hHHhHhccEEEECCC
Confidence 9999999999999875421 112346777777654
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.06 E-value=0.00012 Score=57.73 Aligned_cols=120 Identities=12% Similarity=0.080 Sum_probs=65.6
Q ss_pred CCceEEEEEccCCCCccc-hHHHhhcCC--CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSS-WSQLLESLP--LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~-~~~~~~~l~--~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
..+.+++|+||+..+-.+ -.+.++... ......+.+-+|-+|.-. + +..+......... ..+.
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~----------~---Yn~DreS~~~Sr~-aLe~ 179 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLL----------G---YNYDRESTNYSRP-ALER 179 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeee----------e---cccchhhhhhhHH-HHHH
Confidence 456799999998877654 223333332 244555666666433211 1 1111111112222 2333
Q ss_pred HHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCC
Q 025121 109 IANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPG 168 (257)
Q Consensus 109 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 168 (257)
+...|.+....++|.|++||||.++++..+.+...... ...+.+++-+|+.++=.+.
T Consensus 180 ~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~---~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 180 LLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRAD---RPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred HHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCC---cchhhhhhheEeeCCCCCh
Confidence 33333344434599999999999999999875422111 1146678888888775443
|
|
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.00022 Score=53.55 Aligned_cols=188 Identities=21% Similarity=0.245 Sum_probs=97.0
Q ss_pred CCceEEEEEccC--CCCcc-chHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025121 32 KHQATIVWLHGL--GDNGS-SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 32 ~~~~~vi~~HG~--~~~~~-~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
+|+.+|=|+-|. |.... .|+.+.+.|+++||.|++.-+.. + |+-... ...-...+....+.
T Consensus 15 ~P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-------t------fDH~~~---A~~~~~~f~~~~~~ 78 (250)
T PF07082_consen 15 RPKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-------T------FDHQAI---AREVWERFERCLRA 78 (250)
T ss_pred CCCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-------C------CcHHHH---HHHHHHHHHHHHHH
Confidence 466677777773 33333 48889999999999999965320 0 100000 00011122222222
Q ss_pred HHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEec--c-----CCCCchhhhhc----cc
Q 025121 109 IANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLS--G-----WLPGSRNLRNK----IE 177 (257)
Q Consensus 109 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~-----~~~~~~~~~~~----~~ 177 (257)
+.+-.......-+++=+|||+|+-+-+.+.... +..-++-+++| . .+|..+.+... +.
T Consensus 79 L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~-----------~~~r~gniliSFNN~~a~~aIP~~~~l~~~l~~EF~ 147 (250)
T PF07082_consen 79 LQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLF-----------DVERAGNILISFNNFPADEAIPLLEQLAPALRLEFT 147 (250)
T ss_pred HHHhcCCCcccCCeeeeecccchHHHHHHhhhc-----------cCcccceEEEecCChHHHhhCchHhhhccccccCcc
Confidence 221111111113788899999999999887642 33334444443 1 12222211111 11
Q ss_pred cchHHHh-----hhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC--H----------HHHH
Q 025121 178 GSHEAAR-----RAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV--P----------KEMD 240 (257)
Q Consensus 178 ~~~~~~~-----~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~----------~~~~ 240 (257)
..+.... .-.-..+++|-=.+|.+ ++...+.+.++......++....+| .|... + .-.+
T Consensus 148 PsP~ET~~li~~~Y~~~rnLLIkF~~D~i---Dqt~~L~~~L~~r~~~~~~~~~L~G-~HLTPl~q~~~~~~g~~ftP~d 223 (250)
T PF07082_consen 148 PSPEETRRLIRESYQVRRNLLIKFNDDDI---DQTDELEQILQQRFPDMVSIQTLPG-NHLTPLGQDLKWQVGSSFTPLD 223 (250)
T ss_pred CCHHHHHHHHHHhcCCccceEEEecCCCc---cchHHHHHHHhhhccccceEEeCCC-CCCCcCcCCcCCccCCccCchH
Confidence 1111111 11233467777777766 5667777777755333467788886 99643 1 1246
Q ss_pred HHHHHHHHhc
Q 025121 241 EVCNWLTARL 250 (257)
Q Consensus 241 ~~~~~l~~~l 250 (257)
.+.+|+++.+
T Consensus 224 a~~q~~k~~~ 233 (250)
T PF07082_consen 224 AVGQWLKQEV 233 (250)
T ss_pred HHHHHHHHHH
Confidence 6777776644
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.03 E-value=1.6e-05 Score=55.47 Aligned_cols=167 Identities=13% Similarity=0.100 Sum_probs=97.2
Q ss_pred EEEEEccCCCCccchH------HHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 36 TIVWLHGLGDNGSSWS------QLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 36 ~vi~~HG~~~~~~~~~------~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
+||.+.-.++.-..|. .+++.+...-...++++ |-...+|+.... +..+-...-.++
T Consensus 28 pVvvFpts~Grf~eyed~G~v~ala~fie~G~vQlft~~----------gldsESf~a~h~-------~~adr~~rH~Ay 90 (227)
T COG4947 28 PVVVFPTSGGRFNEYEDFGMVDALASFIEEGLVQLFTLS----------GLDSESFLATHK-------NAADRAERHRAY 90 (227)
T ss_pred cEEEEecCCCcchhhhhcccHHHHHHHHhcCcEEEEEec----------ccchHhHhhhcC-------CHHHHHHHHHHH
Confidence 4444444444444443 34455554455666666 222334443311 122223333444
Q ss_pred HHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccc------------
Q 025121 110 ANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIE------------ 177 (257)
Q Consensus 110 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~------------ 177 (257)
..++.++..+....+-|.||||+.|..+..++ |..+.++|++||.++..+.+-..+.
T Consensus 91 erYv~eEalpgs~~~sgcsmGayhA~nfvfrh-----------P~lftkvialSGvYdardffg~yyddDv~ynsP~dyl 159 (227)
T COG4947 91 ERYVIEEALPGSTIVSGCSMGAYHAANFVFRH-----------PHLFTKVIALSGVYDARDFFGGYYDDDVYYNSPSDYL 159 (227)
T ss_pred HHHHHHhhcCCCccccccchhhhhhhhhheeC-----------hhHhhhheeecceeeHHHhccccccCceeecChhhhc
Confidence 44444443334778899999999999999975 8999999999997654433222111
Q ss_pred ---cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCc
Q 025121 178 ---GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHY 233 (257)
Q Consensus 178 ---~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~ 233 (257)
..+........+.+.+..|.+|+..+. .+.+.+.+.++.+ +..+.+..|..|.
T Consensus 160 pg~~dp~~l~rlr~~~~vfc~G~e~~~L~~--~~~L~~~l~dKqi-paw~~~WggvaHd 215 (227)
T COG4947 160 PGLADPFRLERLRRIDMVFCIGDEDPFLDN--NQHLSRLLSDKQI-PAWMHVWGGVAHD 215 (227)
T ss_pred cCCcChHHHHHHhhccEEEEecCccccccc--hHHHHHHhccccc-cHHHHHhcccccc
Confidence 112233455577888899998887654 5667777776655 3445555555554
|
|
| >KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.01 E-value=3.4e-05 Score=60.70 Aligned_cols=89 Identities=18% Similarity=0.147 Sum_probs=62.3
Q ss_pred eEEEEEccCCCCccchHHHhhcCCCC---------ceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025121 35 ATIVWLHGLGDNGSSWSQLLESLPLP---------NIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 35 ~~vi~~HG~~~~~~~~~~~~~~l~~~---------g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
-+++++||+.++-.++..++..|... -+.||+|.+||-|.+..... .--...+.
T Consensus 153 ~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk-----------------~GFn~~a~ 215 (469)
T KOG2565|consen 153 KPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSK-----------------TGFNAAAT 215 (469)
T ss_pred cceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCcc-----------------CCccHHHH
Confidence 48999999999999998888887643 47999999997554432211 01112333
Q ss_pred HHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhc
Q 025121 106 AAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
+.-+.+++-...-+ +++|-|-.||..++..++...
T Consensus 216 ArvmrkLMlRLg~n-kffiqGgDwGSiI~snlasLy 250 (469)
T KOG2565|consen 216 ARVMRKLMLRLGYN-KFFIQGGDWGSIIGSNLASLY 250 (469)
T ss_pred HHHHHHHHHHhCcc-eeEeecCchHHHHHHHHHhhc
Confidence 44444554444333 999999999999999999853
|
|
| >KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00024 Score=53.53 Aligned_cols=87 Identities=26% Similarity=0.413 Sum_probs=51.7
Q ss_pred eEEEEEccCCCCccc--hHHHhhcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 35 ATIVWLHGLGDNGSS--WSQLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 35 ~~vi~~HG~~~~~~~--~~~~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
-++|++||++++..+ +..+.+.+. ..|..|++.|.- .|. ..+|+ ..-++++....+.+.
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig-------~g~-~~s~l---------~pl~~Qv~~~ce~v~- 85 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIG-------DGI-KDSSL---------MPLWEQVDVACEKVK- 85 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEec-------CCc-chhhh---------ccHHHHHHHHHHHHh-
Confidence 368899999988776 444444443 258888887731 120 01111 112334444444443
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhc
Q 025121 112 LLSTEPADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
... +. ..-+.++|.|+||.++-.++..-
T Consensus 86 ~m~-~l-sqGynivg~SQGglv~Raliq~c 113 (296)
T KOG2541|consen 86 QMP-EL-SQGYNIVGYSQGGLVARALIQFC 113 (296)
T ss_pred cch-hc-cCceEEEEEccccHHHHHHHHhC
Confidence 111 12 23789999999999999998864
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=97.94 E-value=4.7e-05 Score=58.40 Aligned_cols=102 Identities=20% Similarity=0.271 Sum_probs=47.1
Q ss_pred eEEEEEccCCCCcc---chHH---HhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025121 35 ATIVWLHGLGDNGS---SWSQ---LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 35 ~~vi~~HG~~~~~~---~~~~---~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
.+||+.||+|.+.. .+.. +++.. ..|.-|.+++.-. +. . -+. ...-...+.+.++.
T Consensus 6 ~PvViwHGmGD~~~~~~~m~~i~~~i~~~-~PG~yV~si~ig~-------~~--~--~D~------~~s~f~~v~~Qv~~ 67 (279)
T PF02089_consen 6 LPVVIWHGMGDSCCNPSSMGSIKELIEEQ-HPGTYVHSIEIGN-------DP--S--EDV------ENSFFGNVNDQVEQ 67 (279)
T ss_dssp --EEEE--TT--S--TTTHHHHHHHHHHH-STT--EEE--SSS-------SH--H--HHH------HHHHHSHHHHHHHH
T ss_pred CcEEEEEcCccccCChhHHHHHHHHHHHh-CCCceEEEEEECC-------Cc--c--hhh------hhhHHHHHHHHHHH
Confidence 47899999997642 3433 33333 2677777776320 00 0 000 00001223333444
Q ss_pred HHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEecc
Q 025121 109 IANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG 164 (257)
Q Consensus 109 ~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 164 (257)
+-+.++... ..+-+.++|+|+||.+.=.++.+.+ .+.+.-+|.+++
T Consensus 68 vc~~l~~~p~L~~G~~~IGfSQGgl~lRa~vq~c~----------~~~V~nlISlgg 114 (279)
T PF02089_consen 68 VCEQLANDPELANGFNAIGFSQGGLFLRAYVQRCN----------DPPVHNLISLGG 114 (279)
T ss_dssp HHHHHHH-GGGTT-EEEEEETCHHHHHHHHHHH-T----------SS-EEEEEEES-
T ss_pred HHHHHhhChhhhcceeeeeeccccHHHHHHHHHCC----------CCCceeEEEecC
Confidence 444443321 1237999999999999999998742 346788888766
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.89 E-value=7.6e-05 Score=62.65 Aligned_cols=122 Identities=14% Similarity=0.045 Sum_probs=72.7
Q ss_pred CCCCCceEEeCCCCCCceEEEEEccCCCCcc-----chHHHhh---cCCCCceEEEccCCCCCCcccCCCCcccccccCC
Q 025121 18 TFEFGRTHVVRPKGKHQATIVWLHGLGDNGS-----SWSQLLE---SLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVG 89 (257)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~vi~~HG~~~~~~-----~~~~~~~---~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~ 89 (257)
++.+...++.+....+.|+++..+-+.-.+. ....... .++.+||.|+..|.||++.+. |. ++..
T Consensus 29 GvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~Se--G~-----~~~~ 101 (563)
T COG2936 29 GVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSE--GV-----FDPE 101 (563)
T ss_pred CeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCC--cc-----ccee
Confidence 3444444555555678899998882221111 1223334 577899999999999875432 21 1110
Q ss_pred CCCCCCCCchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025121 90 ELSDDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
. .. ...+.++.|..+.++.--+.+|+.+|.|++|+..+.+|+.. |+.+++++..++.
T Consensus 102 ~-----~~---E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~-----------pPaLkai~p~~~~ 158 (563)
T COG2936 102 S-----SR---EAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQ-----------PPALKAIAPTEGL 158 (563)
T ss_pred c-----cc---cccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcC-----------Cchheeecccccc
Confidence 0 00 11222333333333333334999999999999999999954 7778887766553
|
|
| >PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00013 Score=53.91 Aligned_cols=36 Identities=17% Similarity=0.185 Sum_probs=26.9
Q ss_pred EEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC
Q 025121 192 LLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV 235 (257)
Q Consensus 192 l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 235 (257)
..+.|++|.++|++..+++.+.. +.+.+++ ++|+..
T Consensus 169 ~aiIg~~D~IFpp~nQ~~~W~~~-------~~~~~~~-~~Hy~F 204 (213)
T PF04301_consen 169 KAIIGKKDRIFPPENQKRAWQGR-------CTIVEID-APHYPF 204 (213)
T ss_pred EEEEcCCCEEeCHHHHHHHHhCc-------CcEEEec-CCCcCc
Confidence 37889999999998887777642 2455666 699865
|
|
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00012 Score=51.82 Aligned_cols=74 Identities=18% Similarity=0.047 Sum_probs=48.4
Q ss_pred CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhhhcCCCEEEEccC
Q 025121 118 ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGL 197 (257)
Q Consensus 118 ~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~G~ 197 (257)
...++.++|||+||.+|..++.+... ........++.++++......+.. ..........+..++..
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~-------~~~~~~~~~~~fg~p~~~~~~~~~------~~~~~~~~~~~~~i~~~ 92 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRG-------RGLGRLVRVYTFGPPRVGNAAFAE------DRLDPSDALFVDRIVND 92 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHh-------ccCCCceEEEEeCCCcccchHHHH------HhhhccCCccEEEEEEC
Confidence 34599999999999999999886411 002356667788776655544332 01122345678888888
Q ss_pred CCCcccc
Q 025121 198 CDDVVPY 204 (257)
Q Consensus 198 ~D~~v~~ 204 (257)
.|.+...
T Consensus 93 ~D~v~~~ 99 (153)
T cd00741 93 NDIVPRL 99 (153)
T ss_pred CCccCCC
Confidence 8876543
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.0043 Score=51.63 Aligned_cols=63 Identities=19% Similarity=0.248 Sum_probs=48.1
Q ss_pred CCCEEEEccCCCCcccchhhHHHHHHhhhcC---------------c----ee-eEEEEecCCCCccCHHHHHHHHHHHH
Q 025121 188 SLPILLTHGLCDDVVPYKYGEKSANCLSISG---------------F----RH-LTFKSFEGLGHYTVPKEMDEVCNWLT 247 (257)
Q Consensus 188 ~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~---------------~----~~-~~~~~~~g~~H~~~~~~~~~~~~~l~ 247 (257)
.+++|+..|+.|-+|+.-..+.+.+.++-.+ . .+ .++..+.++||.+. ..++...+-+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 5799999999999999988888888886211 1 23 77888899999994 56666666666
Q ss_pred HhcC
Q 025121 248 ARLG 251 (257)
Q Consensus 248 ~~l~ 251 (257)
+++.
T Consensus 430 ~fi~ 433 (437)
T PLN02209 430 RWIS 433 (437)
T ss_pred HHHc
Confidence 6654
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.0049 Score=51.29 Aligned_cols=64 Identities=19% Similarity=0.242 Sum_probs=47.8
Q ss_pred cCCCEEEEccCCCCcccchhhHHHHHHhhhcC---------------c----ee-eEEEEecCCCCccCHHHHHHHHHHH
Q 025121 187 ASLPILLTHGLCDDVVPYKYGEKSANCLSISG---------------F----RH-LTFKSFEGLGHYTVPKEMDEVCNWL 246 (257)
Q Consensus 187 ~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~---------------~----~~-~~~~~~~g~~H~~~~~~~~~~~~~l 246 (257)
...+||+..|+.|-+||.-..+.+.+.|+-.+ . .+ .++..+.++||.+. ..++...+-+
T Consensus 346 ~~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~ 424 (433)
T PLN03016 346 SGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMF 424 (433)
T ss_pred cCceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHH
Confidence 35899999999999999988888888876221 1 12 67888899999995 4566666666
Q ss_pred HHhcC
Q 025121 247 TARLG 251 (257)
Q Consensus 247 ~~~l~ 251 (257)
.+++.
T Consensus 425 ~~Fi~ 429 (433)
T PLN03016 425 QRWIS 429 (433)
T ss_pred HHHHc
Confidence 66554
|
|
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00014 Score=47.63 Aligned_cols=56 Identities=27% Similarity=0.339 Sum_probs=47.4
Q ss_pred CCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCH----HHHHHHHHHHHH
Q 025121 188 SLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVP----KEMDEVCNWLTA 248 (257)
Q Consensus 188 ~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~----~~~~~~~~~l~~ 248 (257)
..|+|++.++.|.++|++.++.+.+.+. +.+++.++|.||.... -..+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~-----~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP-----GSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC-----CceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 5999999999999999999999999998 5689999999998762 234666677764
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00042 Score=54.21 Aligned_cols=144 Identities=15% Similarity=0.123 Sum_probs=81.6
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
+.+..||++-|..+-.+. ..+..=++.||.|+..++||.+ .+.|-+ | ........+..++....
T Consensus 241 ngq~LvIC~EGNAGFYEv--G~m~tP~~lgYsvLGwNhPGFa--gSTG~P----~--------p~n~~nA~DaVvQfAI~ 304 (517)
T KOG1553|consen 241 NGQDLVICFEGNAGFYEV--GVMNTPAQLGYSVLGWNHPGFA--GSTGLP----Y--------PVNTLNAADAVVQFAIQ 304 (517)
T ss_pred CCceEEEEecCCccceEe--eeecChHHhCceeeccCCCCcc--ccCCCC----C--------cccchHHHHHHHHHHHH
Confidence 446689999986654331 1111112579999999998532 111211 0 11112222222222222
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh----------------hc
Q 025121 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR----------------NK 175 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----------------~~ 175 (257)
.+. ...+.|++.|+|.||+.+..+|.. -+.++++|+-+.|-+...... ..
T Consensus 305 ~Lg--f~~edIilygWSIGGF~~~waAs~------------YPdVkavvLDAtFDDllpLAl~rMP~~~~giV~~aiRnh 370 (517)
T KOG1553|consen 305 VLG--FRQEDIILYGWSIGGFPVAWAASN------------YPDVKAVVLDATFDDLLPLALFRMPTFFSGIVEHAIRNH 370 (517)
T ss_pred HcC--CCccceEEEEeecCCchHHHHhhc------------CCCceEEEeecchhhhhhHHhhhchHHHHHHHHHHHHHh
Confidence 222 234589999999999999999984 356899987766533221111 11
Q ss_pred cccchHHHhhhcCCCEEEEccCCCCcccch
Q 025121 176 IEGSHEAARRAASLPILLTHGLCDDVVPYK 205 (257)
Q Consensus 176 ~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~ 205 (257)
+.-........-+.|+.+|.-++|+++...
T Consensus 371 ~NLnnaell~ry~GPi~lIRRt~dEIitt~ 400 (517)
T KOG1553|consen 371 MNLNNAELLARYKGPIRLIRRTQDEIITTA 400 (517)
T ss_pred cccchHHHHHhhcCchhHhhhhhHhhhhcc
Confidence 111222344556889999999999887654
|
|
| >KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.015 Score=48.30 Aligned_cols=97 Identities=16% Similarity=0.084 Sum_probs=59.0
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCC------------------CCceEEEccCCCCCCcccCCCCcccccccCCCC-C
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLP------------------LPNIKWICPTAPTRPVAILGGFPCTAWFDVGEL-S 92 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~------------------~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~-~ 92 (257)
...|+|||+-|..+++..- .+...+. .+-..++.+|.|- .-| |+.... .
T Consensus 71 ~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~Pv-----GvG------FSYs~~~~ 138 (454)
T KOG1282|consen 71 ETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPV-----GVG------FSYSNTSS 138 (454)
T ss_pred CCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCC-----cCC------ccccCCCC
Confidence 3478999999998877543 2222221 1234666777662 112 222111 1
Q ss_pred CCCCCchhhHHHHHHHHHHHhccC--CCCceEEEEEechhHHHHHHHHHh
Q 025121 93 DDGPEDWEGLDASAAHIANLLSTE--PADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
.....+.....+....|.+++++. ....+++|.|.|++|...-.+|.+
T Consensus 139 ~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~ 188 (454)
T KOG1282|consen 139 DYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQE 188 (454)
T ss_pred cCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHH
Confidence 112345556677777788888764 334599999999999877777764
|
|
| >KOG1516 consensus Carboxylesterase and related proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00067 Score=58.51 Aligned_cols=97 Identities=16% Similarity=0.138 Sum_probs=60.4
Q ss_pred ceEEEEEccCCCCccc---h--HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025121 34 QATIVWLHGLGDNGSS---W--SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~---~--~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
.|++|++||.+-.... + ......+......|+.+.+|.-.++. +..+...........+......+
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF---------~st~d~~~~gN~gl~Dq~~AL~w 182 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGF---------LSTGDSAAPGNLGLFDQLLALRW 182 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceecee---------eecCCCCCCCcccHHHHHHHHHH
Confidence 7999999997532222 2 12222333457888888877532221 11121111233334466667777
Q ss_pred HHHHhccCC-CCceEEEEEechhHHHHHHHHH
Q 025121 109 IANLLSTEP-ADVKVGIGGFSMGAAVALYSAT 139 (257)
Q Consensus 109 ~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~ 139 (257)
+.+.|.... ++++|.|+|||.||..+..++.
T Consensus 183 v~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~ 214 (545)
T KOG1516|consen 183 VKDNIPSFGGDPKNVTLFGHSAGAASVSLLTL 214 (545)
T ss_pred HHHHHHhcCCCCCeEEEEeechhHHHHHHHhc
Confidence 777777764 4479999999999999988876
|
|
| >PLN02606 palmitoyl-protein thioesterase | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00073 Score=52.49 Aligned_cols=54 Identities=19% Similarity=0.107 Sum_probs=34.8
Q ss_pred hhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEecc
Q 025121 99 WEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG 164 (257)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 164 (257)
.++++..++.+.. .... . +-+.++|+|+||.+.=.++.+.+. .+.+.-+|.+++
T Consensus 77 ~~Qv~~vce~l~~-~~~L-~-~G~naIGfSQGglflRa~ierc~~---------~p~V~nlISlgg 130 (306)
T PLN02606 77 RQQASIACEKIKQ-MKEL-S-EGYNIVAESQGNLVARGLIEFCDN---------APPVINYVSLGG 130 (306)
T ss_pred HHHHHHHHHHHhc-chhh-c-CceEEEEEcchhHHHHHHHHHCCC---------CCCcceEEEecC
Confidence 4455555555544 2222 2 268999999999999999987521 134666666654
|
|
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.00089 Score=46.51 Aligned_cols=37 Identities=24% Similarity=0.307 Sum_probs=27.7
Q ss_pred HHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhc
Q 025121 104 ASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
...+.+.+++++... .++.+.|||+||.+|..++...
T Consensus 49 ~~~~~l~~~~~~~~~-~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 49 QILDALKELVEKYPD-YSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHSTT-SEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccC-ccchhhccchHHHHHHHHHHhh
Confidence 445555555555443 4999999999999999999864
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.00095 Score=54.83 Aligned_cols=43 Identities=19% Similarity=0.159 Sum_probs=30.9
Q ss_pred CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCC
Q 025121 119 DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWL 166 (257)
Q Consensus 119 ~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 166 (257)
..+++|+||||||.++..++........ ....|+++|.+++..
T Consensus 118 ~~kv~li~HSmGgl~~~~fl~~~~~~~W-----~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 118 GKKVVLIAHSMGGLVARYFLQWMPQEEW-----KDKYIKRFISIGTPF 160 (389)
T ss_pred CCcEEEEEeCCCchHHHHHHHhccchhh-----HHhhhhEEEEeCCCC
Confidence 4599999999999999999886411000 134588888887653
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0018 Score=48.79 Aligned_cols=56 Identities=21% Similarity=0.310 Sum_probs=39.6
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025121 101 GLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
....++..+.+.++.... ++.+.|||.||.+|...+... .....+++..+..+.++
T Consensus 67 ~q~~A~~yl~~~~~~~~~--~i~v~GHSkGGnLA~yaa~~~-------~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 67 QQKSALAYLKKIAKKYPG--KIYVTGHSKGGNLAQYAAANC-------DDEIQDRISKVYSFDGP 122 (224)
T ss_pred HHHHHHHHHHHHHHhCCC--CEEEEEechhhHHHHHHHHHc-------cHHHhhheeEEEEeeCC
Confidence 345556666666655432 699999999999999999863 11235678888887664
|
|
| >KOG2521 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.046 Score=43.80 Aligned_cols=64 Identities=17% Similarity=0.137 Sum_probs=54.0
Q ss_pred CCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC-----HHHHHHHHHHHHHhcCc
Q 025121 188 SLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-----PKEMDEVCNWLTARLGL 252 (257)
Q Consensus 188 ~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-----~~~~~~~~~~l~~~l~~ 252 (257)
..+.+.+.+..|.++|.+..+++.+..++.|+ +++..-+.++.|..+ ....+...+|++.....
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~-~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~~~ 293 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGV-NVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSVISS 293 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCc-eEEEeeccCccceeeeccCcHHHHHHHHHHHHhcccc
Confidence 67889999999999999999999999999888 788888888888544 66778899999886554
|
|
| >KOG3967 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0086 Score=43.85 Aligned_cols=23 Identities=17% Similarity=0.075 Sum_probs=20.6
Q ss_pred CceEEEEEechhHHHHHHHHHhc
Q 025121 119 DVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 119 ~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
...++++.||.||..++.+..+.
T Consensus 189 ~~sv~vvahsyGG~~t~~l~~~f 211 (297)
T KOG3967|consen 189 AESVFVVAHSYGGSLTLDLVERF 211 (297)
T ss_pred cceEEEEEeccCChhHHHHHHhc
Confidence 34899999999999999999975
|
|
| >COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0024 Score=50.60 Aligned_cols=60 Identities=13% Similarity=0.092 Sum_probs=47.8
Q ss_pred hhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHH-HHHHHHH
Q 025121 185 RAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDE-VCNWLTA 248 (257)
Q Consensus 185 ~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~-~~~~l~~ 248 (257)
.....|-.|+.+..|.++.++.+.-+++.|+. ...+..+|+..|...++..+. +..|+..
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG----~kaLrmvPN~~H~~~n~~i~esl~~flnr 386 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPG----EKALRMVPNDPHNLINQFIKESLEPFLNR 386 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCC----ceeeeeCCCCcchhhHHHHHHHHHHHHHH
Confidence 45688999999999999999999999999985 457889999999988765543 3334433
|
|
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0023 Score=47.11 Aligned_cols=40 Identities=15% Similarity=0.049 Sum_probs=33.8
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHh
Q 025121 101 GLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
.+.+...++..++++.....+++|+|||+|+.+...++..
T Consensus 76 ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e 115 (207)
T PF11288_consen 76 AYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKE 115 (207)
T ss_pred hHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHH
Confidence 4566777778888887766799999999999999999885
|
|
| >KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0072 Score=48.75 Aligned_cols=132 Identities=14% Similarity=0.073 Sum_probs=74.2
Q ss_pred cCCCCCceEEeCCC--CCCceEEEEEccCCCCccchHH---HhhcCC-CCceEEEccCCCCCCcccCCCCcccccccCCC
Q 025121 17 RTFEFGRTHVVRPK--GKHQATIVWLHGLGDNGSSWSQ---LLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGE 90 (257)
Q Consensus 17 ~~~~~~~~~~~~~~--~~~~~~vi~~HG~~~~~~~~~~---~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~ 90 (257)
...+|...|.+... .+...+|+|.-|.-++-..+.. ++-.++ +.+.-+|.+++|.-|.+..-|.. + + ..
T Consensus 61 ~~~tF~qRylin~~fw~~g~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~--s-~--k~ 135 (492)
T KOG2183|consen 61 DNKTFDQRYLINDDFWKKGEGPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQ--S-Y--KD 135 (492)
T ss_pred CccceeeEEEEecccccCCCCceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcch--h-c--cC
Confidence 34455566666543 2333689999997776654432 222222 44678888898877766554432 1 0 00
Q ss_pred CCCCCCCchhhHHHHHHHHHHHhccCC--CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEecc
Q 025121 91 LSDDGPEDWEGLDASAAHIANLLSTEP--ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG 164 (257)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 164 (257)
...-.-...++...+.+.+...++... ...+|+++|-|+||+++..+=. +||.-+.|+++-|.
T Consensus 136 ~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRl-----------KYPHiv~GAlAaSA 200 (492)
T KOG2183|consen 136 ARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRL-----------KYPHIVLGALAASA 200 (492)
T ss_pred hhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHh-----------cChhhhhhhhhccC
Confidence 000111122222223333334444332 1249999999999999988866 67887777765554
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.005 Score=51.59 Aligned_cols=128 Identities=14% Similarity=0.011 Sum_probs=62.4
Q ss_pred CCCceEEeCCC--CCCceEEEEEccCCCCccc-h--HHHhhcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCC
Q 025121 20 EFGRTHVVRPK--GKHQATIVWLHGLGDNGSS-W--SQLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSD 93 (257)
Q Consensus 20 ~~~~~~~~~~~--~~~~~~vi~~HG~~~~~~~-~--~~~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~ 93 (257)
+|...|.+... +++.|++|++-|=+ .... + ..+...|+ +.|-.++++++|.-|.+..-+.... ..
T Consensus 13 tf~qRY~~n~~~~~~~gpifl~~ggE~-~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~--------~n 83 (434)
T PF05577_consen 13 TFSQRYWVNDQYYKPGGPIFLYIGGEG-PIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLST--------EN 83 (434)
T ss_dssp EEEEEEEEE-TT--TTSEEEEEE--SS--HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGG--------ST
T ss_pred eEEEEEEEEhhhcCCCCCEEEEECCCC-ccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccch--------hh
Confidence 33344444332 33466666665533 2221 1 11333333 3578999999997766543221100 00
Q ss_pred CCCCchhhHHHHHHHHHHHhccCC---CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCC
Q 025121 94 DGPEDWEGLDASAAHIANLLSTEP---ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP 167 (257)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 167 (257)
-.-...++..+++..+...++... ...|++++|-|+||.+|..+-. +||..+.+.++-|+.+.
T Consensus 84 L~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~-----------kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 84 LRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRL-----------KYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHH-----------H-TTT-SEEEEET--CC
T ss_pred HHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHh-----------hCCCeeEEEEeccceee
Confidence 111233333333333333333221 2249999999999999999988 56999999999888653
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2 | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.18 Score=42.03 Aligned_cols=97 Identities=19% Similarity=0.204 Sum_probs=57.6
Q ss_pred eEEeCCCCCCceEEEEEccCCCCccchH--HHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhh
Q 025121 24 THVVRPKGKHQATIVWLHGLGDNGSSWS--QLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEG 101 (257)
Q Consensus 24 ~~~~~~~~~~~~~vi~~HG~~~~~~~~~--~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 101 (257)
.+++.|+.-+.|..|++-|+-. ...+. .+++.|. .-+- +.-|.|..|-. |..+. ...+..
T Consensus 279 ~yYFnPGD~KPPL~VYFSGyR~-aEGFEgy~MMk~Lg-~PfL-L~~DpRleGGa----------FYlGs-----~eyE~~ 340 (511)
T TIGR03712 279 IYYFNPGDFKPPLNVYFSGYRP-AEGFEGYFMMKRLG-APFL-LIGDPRLEGGA----------FYLGS-----DEYEQG 340 (511)
T ss_pred EEecCCcCCCCCeEEeeccCcc-cCcchhHHHHHhcC-CCeE-Eeeccccccce----------eeeCc-----HHHHHH
Confidence 5666788778889999999876 44444 3666664 3333 33355543322 22211 111223
Q ss_pred HHHHHHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhc
Q 025121 102 LDASAAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
+ .+.+.+.++... ....++|-|.|||.+-|+.+++..
T Consensus 341 I---~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 341 I---INVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKL 378 (511)
T ss_pred H---HHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccC
Confidence 3 333344444433 234899999999999999999853
|
This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >KOG1551 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.14 Score=39.16 Aligned_cols=52 Identities=13% Similarity=0.153 Sum_probs=38.2
Q ss_pred EEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC----HHHH-HHHHHHHHH
Q 025121 191 ILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV----PKEM-DEVCNWLTA 248 (257)
Q Consensus 191 ~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~----~~~~-~~~~~~l~~ 248 (257)
++++.+++|..+|......+.+..+ ++++..++ +||-.. .+.+ ..|.+-|++
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WP-----g~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R 365 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWP-----GCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDR 365 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCC-----CCEEEEee-cCceeeeehhchHHHHHHHHHHHh
Confidence 6788899999999988888888877 67888888 499532 3333 556666654
|
|
| >cd00519 Lipase_3 Lipase (class 3) | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0057 Score=46.44 Aligned_cols=23 Identities=35% Similarity=0.361 Sum_probs=20.1
Q ss_pred CceEEEEEechhHHHHHHHHHhc
Q 025121 119 DVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 119 ~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
..++.++|||+||.+|..++...
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHH
Confidence 34999999999999999988853
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.0064 Score=51.65 Aligned_cols=22 Identities=27% Similarity=0.090 Sum_probs=19.5
Q ss_pred CceEEEEEechhHHHHHHHHHh
Q 025121 119 DVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 119 ~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
..|++|+||||||.+++.++..
T Consensus 212 gkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 212 GKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred CCeEEEEEeCCchHHHHHHHHh
Confidence 3599999999999999998874
|
|
| >KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.009 Score=49.06 Aligned_cols=23 Identities=30% Similarity=0.270 Sum_probs=20.6
Q ss_pred ceEEEEEechhHHHHHHHHHhcc
Q 025121 120 VKVGIGGFSMGAAVALYSATCCA 142 (257)
Q Consensus 120 ~~i~l~G~S~Gg~~a~~~~~~~~ 142 (257)
+|++|++||||+.+.+.++.+..
T Consensus 182 kkVvlisHSMG~l~~lyFl~w~~ 204 (473)
T KOG2369|consen 182 KKVVLISHSMGGLYVLYFLKWVE 204 (473)
T ss_pred CceEEEecCCccHHHHHHHhccc
Confidence 59999999999999999988654
|
|
| >PLN02162 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.013 Score=48.34 Aligned_cols=37 Identities=19% Similarity=0.233 Sum_probs=26.6
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHh
Q 025121 103 DASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
.+..+.+.+++.+.. ..++.++|||+||.+|..++..
T Consensus 262 ~~I~~~L~~lL~k~p-~~kliVTGHSLGGALAtLaAa~ 298 (475)
T PLN02162 262 YTIRQMLRDKLARNK-NLKYILTGHSLGGALAALFPAI 298 (475)
T ss_pred HHHHHHHHHHHHhCC-CceEEEEecChHHHHHHHHHHH
Confidence 344455555665543 3499999999999999998763
|
|
| >PLN00413 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.014 Score=48.30 Aligned_cols=36 Identities=22% Similarity=0.441 Sum_probs=26.9
Q ss_pred HHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHh
Q 025121 104 ASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
+....+.+++++.. ..++.++|||+||.+|...+..
T Consensus 269 ~i~~~Lk~ll~~~p-~~kliVTGHSLGGALAtLaA~~ 304 (479)
T PLN00413 269 TILRHLKEIFDQNP-TSKFILSGHSLGGALAILFTAV 304 (479)
T ss_pred HHHHHHHHHHHHCC-CCeEEEEecCHHHHHHHHHHHH
Confidence 44556666665543 3489999999999999998863
|
|
| >PLN02310 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.015 Score=47.41 Aligned_cols=36 Identities=25% Similarity=0.355 Sum_probs=24.9
Q ss_pred HHHHHHHHhccC---CCCceEEEEEechhHHHHHHHHHh
Q 025121 105 SAAHIANLLSTE---PADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 105 ~~~~~~~~~~~~---~~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
....+..+++.. ....+|.++|||+||.+|...+..
T Consensus 191 Vl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 191 VMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 344444444432 223489999999999999998864
|
|
| >PLN02571 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.012 Score=48.02 Aligned_cols=39 Identities=26% Similarity=0.373 Sum_probs=27.9
Q ss_pred HHHHHHHHHHhccCCCC-ceEEEEEechhHHHHHHHHHhc
Q 025121 103 DASAAHIANLLSTEPAD-VKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
.+....+..+++..... .+|.++|||+||.+|...|...
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl 247 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVDI 247 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHHH
Confidence 44555666666544332 2799999999999999998753
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.013 Score=47.77 Aligned_cols=37 Identities=27% Similarity=0.336 Sum_probs=25.6
Q ss_pred HHHHHHHHHhccCCCC-ceEEEEEechhHHHHHHHHHh
Q 025121 104 ASAAHIANLLSTEPAD-VKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
+....+..+++..... .+|.++|||+||.+|+..|..
T Consensus 211 qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 211 QLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3444455555443322 259999999999999999874
|
|
| >PLN02934 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.015 Score=48.54 Aligned_cols=37 Identities=27% Similarity=0.389 Sum_probs=27.5
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHh
Q 025121 103 DASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
.+....+.+++++.. ..++++.|||+||.+|..++..
T Consensus 305 ~~v~~~lk~ll~~~p-~~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 305 YAVRSKLKSLLKEHK-NAKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred HHHHHHHHHHHHHCC-CCeEEEeccccHHHHHHHHHHH
Confidence 345555666665543 3499999999999999999863
|
|
| >PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids [] | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.031 Score=40.61 Aligned_cols=87 Identities=17% Similarity=0.043 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchH
Q 025121 102 LDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHE 181 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 181 (257)
.......+.+....- ++.+++|+|+|+|+.++..++...+. .....++|.++++++-+......- ..
T Consensus 64 ~~~~~~~i~~~~~~C-P~~kivl~GYSQGA~V~~~~~~~~~l-----~~~~~~~I~avvlfGdP~~~~~~~-~~------ 130 (179)
T PF01083_consen 64 VANLVRLIEEYAARC-PNTKIVLAGYSQGAMVVGDALSGDGL-----PPDVADRIAAVVLFGDPRRGAGQP-GI------ 130 (179)
T ss_dssp HHHHHHHHHHHHHHS-TTSEEEEEEETHHHHHHHHHHHHTTS-----SHHHHHHEEEEEEES-TTTBTTTT-TB------
T ss_pred HHHHHHHHHHHHHhC-CCCCEEEEecccccHHHHHHHHhccC-----ChhhhhhEEEEEEecCCcccCCcc-cc------
Confidence 344444444444443 34499999999999999999875100 012357788988887543321111 00
Q ss_pred HHhhhcCCCEEEEccCCCCccc
Q 025121 182 AARRAASLPILLTHGLCDDVVP 203 (257)
Q Consensus 182 ~~~~~~~~P~l~~~G~~D~~v~ 203 (257)
.......++-++-..|.++.
T Consensus 131 --~~~~~~~~~~~C~~gD~vC~ 150 (179)
T PF01083_consen 131 --PGDYSDRVRSYCNPGDPVCD 150 (179)
T ss_dssp --TCSCGGGEEEE-BTT-GGGG
T ss_pred --CcccccceeEEcCCCCcccC
Confidence 01112347788888888874
|
Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A .... |
| >PLN02408 phospholipase A1 | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.016 Score=46.74 Aligned_cols=38 Identities=32% Similarity=0.366 Sum_probs=27.0
Q ss_pred HHHHHHHHHhccCCCC-ceEEEEEechhHHHHHHHHHhc
Q 025121 104 ASAAHIANLLSTEPAD-VKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
+..+.+.++++..... .+|.++|||+||.+|...+...
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 3445555666554332 3699999999999999998853
|
|
| >PLN03037 lipase class 3 family protein; Provisional | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.022 Score=47.67 Aligned_cols=21 Identities=43% Similarity=0.551 Sum_probs=18.9
Q ss_pred ceEEEEEechhHHHHHHHHHh
Q 025121 120 VKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 120 ~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
.+|.|+|||+||.+|+..|..
T Consensus 318 ~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHH
Confidence 489999999999999999864
|
|
| >PLN02324 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.02 Score=46.83 Aligned_cols=38 Identities=21% Similarity=0.379 Sum_probs=27.3
Q ss_pred HHHHHHHHHHhccCCCC-ceEEEEEechhHHHHHHHHHh
Q 025121 103 DASAAHIANLLSTEPAD-VKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
.+....+.++++..... .+|.++|||+||.+|.+.|..
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 34455566666554332 379999999999999999874
|
|
| >PLN02802 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.029 Score=46.88 Aligned_cols=37 Identities=24% Similarity=0.395 Sum_probs=26.1
Q ss_pred HHHHHHHHhccCCCC-ceEEEEEechhHHHHHHHHHhc
Q 025121 105 SAAHIANLLSTEPAD-VKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 105 ~~~~~~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
....+.++++..... .+|.++|||+||.+|...+...
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 344555555544322 3799999999999999988743
|
|
| >PLN02753 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.032 Score=46.89 Aligned_cols=38 Identities=24% Similarity=0.405 Sum_probs=26.9
Q ss_pred HHHHHHHHHHhccCCC----CceEEEEEechhHHHHHHHHHh
Q 025121 103 DASAAHIANLLSTEPA----DVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~----~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
.+....+..++++... ..+|.++|||+||.+|...|..
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 3445555555554321 3499999999999999999874
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.14 Score=47.39 Aligned_cols=98 Identities=14% Similarity=0.194 Sum_probs=67.5
Q ss_pred CCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025121 31 GKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
....|+++|+|-+-+.......++..|.-.-| ... . ....+..++.+.+++..
T Consensus 2120 ~se~~~~Ffv~pIEG~tt~l~~la~rle~PaY---glQ---------------------~---T~~vP~dSies~A~~yi 2172 (2376)
T KOG1202|consen 2120 QSEEPPLFFVHPIEGFTTALESLASRLEIPAY---GLQ---------------------C---TEAVPLDSIESLAAYYI 2172 (2376)
T ss_pred cccCCceEEEeccccchHHHHHHHhhcCCcch---hhh---------------------c---cccCCcchHHHHHHHHH
Confidence 34678999999999998888888888862222 111 0 11223456677777777
Q ss_pred HHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEecc
Q 025121 111 NLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG 164 (257)
Q Consensus 111 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 164 (257)
+-+++..+..+.-++|+|+|+.++..++....+ .+....+|.+.|
T Consensus 2173 rqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe---------~~~~~~lillDG 2217 (2376)
T KOG1202|consen 2173 RQIRKVQPEGPYRLAGYSYGACLAFEMASQLQE---------QQSPAPLILLDG 2217 (2376)
T ss_pred HHHHhcCCCCCeeeeccchhHHHHHHHHHHHHh---------hcCCCcEEEecC
Confidence 777776666699999999999999999986522 233444777765
|
|
| >PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.13 Score=41.96 Aligned_cols=106 Identities=15% Similarity=0.060 Sum_probs=58.4
Q ss_pred CCCCceEEEEEccCCCCccch-HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025121 30 KGKHQATIVWLHGLGDNGSSW-SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 30 ~~~~~~~vi~~HG~~~~~~~~-~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
.+...|+|++.-|++-..... ....+.|. -+-+.+.+|.-+.+.... ..| ...+..+..++...
T Consensus 59 k~~drPtV~~T~GY~~~~~p~r~Ept~Lld---~NQl~vEhRfF~~SrP~p---~DW---------~~Lti~QAA~D~Hr 123 (448)
T PF05576_consen 59 KDFDRPTVLYTEGYNVSTSPRRSEPTQLLD---GNQLSVEHRFFGPSRPEP---ADW---------SYLTIWQAASDQHR 123 (448)
T ss_pred cCCCCCeEEEecCcccccCccccchhHhhc---cceEEEEEeeccCCCCCC---CCc---------ccccHhHhhHHHHH
Confidence 344568888888887654332 23444443 233344444321111111 112 11234444555555
Q ss_pred HHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEe
Q 025121 109 IANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGL 162 (257)
Q Consensus 109 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 162 (257)
+...++..... +-+-.|.|-||..++..=. -||+.+.+.|..
T Consensus 124 i~~A~K~iY~~-kWISTG~SKGGmTa~y~rr-----------FyP~DVD~tVaY 165 (448)
T PF05576_consen 124 IVQAFKPIYPG-KWISTGGSKGGMTAVYYRR-----------FYPDDVDGTVAY 165 (448)
T ss_pred HHHHHHhhccC-CceecCcCCCceeEEEEee-----------eCCCCCCeeeee
Confidence 66666666655 7889999999998887643 346666666643
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ]. |
| >PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.09 Score=42.25 Aligned_cols=73 Identities=23% Similarity=0.191 Sum_probs=49.9
Q ss_pred CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhhhcCCCEEEEccCC
Q 025121 119 DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLC 198 (257)
Q Consensus 119 ~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~G~~ 198 (257)
..+|.|+|||+|+.+....+...... .....+..+++++++.+........+ .....-.+.-++.++
T Consensus 219 ~RpVtLvG~SLGarvI~~cL~~L~~~------~~~~lVe~VvL~Gapv~~~~~~W~~~-------r~vVsGr~vN~YS~~ 285 (345)
T PF05277_consen 219 ERPVTLVGHSLGARVIYYCLLELAER------KAFGLVENVVLMGAPVPSDPEEWRKI-------RSVVSGRLVNVYSEN 285 (345)
T ss_pred CCceEEEeecccHHHHHHHHHHHHhc------cccCeEeeEEEecCCCCCCHHHHHHH-------HHHccCeEEEEecCc
Confidence 34899999999999999988754221 11334788888887776543322211 234577889999999
Q ss_pred CCcccc
Q 025121 199 DDVVPY 204 (257)
Q Consensus 199 D~~v~~ 204 (257)
|.+..+
T Consensus 286 D~vL~~ 291 (345)
T PF05277_consen 286 DWVLGF 291 (345)
T ss_pred HHHHHH
Confidence 987543
|
|
| >PLN02761 lipase class 3 family protein | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.059 Score=45.30 Aligned_cols=37 Identities=27% Similarity=0.366 Sum_probs=25.8
Q ss_pred HHHHHHHHHhccCC-----CCceEEEEEechhHHHHHHHHHh
Q 025121 104 ASAAHIANLLSTEP-----ADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 104 ~~~~~~~~~~~~~~-----~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
+....+..+++... ...+|.++|||+||.+|...|..
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 34455555554331 22389999999999999999864
|
|
| >PLN02719 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.059 Score=45.21 Aligned_cols=39 Identities=21% Similarity=0.348 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhccCCC----CceEEEEEechhHHHHHHHHHhc
Q 025121 103 DASAAHIANLLSTEPA----DVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~----~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
.+....+.++++.... ..+|.++|||+||.+|...|...
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl 319 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDV 319 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHH
Confidence 3344555555554321 23899999999999999988743
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.088 Score=44.57 Aligned_cols=63 Identities=14% Similarity=0.212 Sum_probs=50.8
Q ss_pred cCCCEEEEccCCCCcccchhhHHHHHHhhhcCc-------eeeEEEEecCCCCccC------HHHHHHHHHHHHHh
Q 025121 187 ASLPILLTHGLCDDVVPYKYGEKSANCLSISGF-------RHLTFKSFEGLGHYTV------PKEMDEVCNWLTAR 249 (257)
Q Consensus 187 ~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~-------~~~~~~~~~g~~H~~~------~~~~~~~~~~l~~~ 249 (257)
..-.+++.||..|.+||+.....+++++.+.-. .-.++..+||++|-.- .+.+..+.+|+.+-
T Consensus 352 ~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G 427 (474)
T PF07519_consen 352 RGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENG 427 (474)
T ss_pred cCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCC
Confidence 357899999999999999999999988876421 2368999999999532 56788999999764
|
It also includes several bacterial homologues of unknown function. |
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.04 Score=32.27 Aligned_cols=20 Identities=25% Similarity=0.639 Sum_probs=11.8
Q ss_pred CCCceEEEEEccCCCCccch
Q 025121 31 GKHQATIVWLHGLGDNGSSW 50 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~ 50 (257)
..++|+|++.||+.+++..|
T Consensus 40 ~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 40 NKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp TTT--EEEEE--TT--GGGG
T ss_pred CCCCCcEEEECCcccChHHH
Confidence 35788999999999999887
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.41 E-value=0.079 Score=42.93 Aligned_cols=28 Identities=25% Similarity=0.484 Sum_probs=20.0
Q ss_pred CCCceEEEEEccCCC-CccchHHHhhcCC
Q 025121 31 GKHQATIVWLHGLGD-NGSSWSQLLESLP 58 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~-~~~~~~~~~~~l~ 58 (257)
.++...|++.||+.+ +...|...+....
T Consensus 77 ~k~~HLvVlthGi~~~~~~~~~~~~~~~~ 105 (405)
T KOG4372|consen 77 TKPKHLVVLTHGLHGADMEYWKEKIEQMT 105 (405)
T ss_pred cCCceEEEeccccccccHHHHHHHHHhhh
Confidence 345679999999887 5666766665554
|
|
| >PLN02847 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=94.39 E-value=0.077 Score=45.34 Aligned_cols=22 Identities=27% Similarity=0.309 Sum_probs=19.4
Q ss_pred ceEEEEEechhHHHHHHHHHhc
Q 025121 120 VKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 120 ~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
-+++++|||+||.+|..++...
T Consensus 251 YkLVITGHSLGGGVAALLAilL 272 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYIL 272 (633)
T ss_pred CeEEEeccChHHHHHHHHHHHH
Confidence 3999999999999999988753
|
|
| >KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.092 Score=40.46 Aligned_cols=37 Identities=22% Similarity=0.255 Sum_probs=28.1
Q ss_pred HHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhc
Q 025121 105 SAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 105 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
++-++...+++...+.+|.|.|||+||.+|.++..+.
T Consensus 261 a~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 261 AALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HHHHHHHHHHHhCCCceEEEeccccchHHHHHhcccc
Confidence 3444455556666667999999999999999998753
|
|
| >COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism] | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.092 Score=40.46 Aligned_cols=37 Identities=22% Similarity=0.255 Sum_probs=28.1
Q ss_pred HHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhc
Q 025121 105 SAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 105 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
++-++...+++...+.+|.|.|||+||.+|.++..+.
T Consensus 261 a~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 261 AALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HHHHHHHHHHHhCCCceEEEeccccchHHHHHhcccc
Confidence 3444455556666667999999999999999998753
|
|
| >COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.24 E-value=0.33 Score=40.70 Aligned_cols=97 Identities=22% Similarity=0.191 Sum_probs=51.4
Q ss_pred CceEEEEEccCCCCccchHHHhhcCC------------------CCceEEEccCCCCCCcccCCCCcccccccCCCCCCC
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLP------------------LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDD 94 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~------------------~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~ 94 (257)
+.|+++++.|..+++..+..+.+.-- ...-.++.+|+|- ..| |+.. ....
T Consensus 100 ~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPv-----GTG------fS~a-~~~e 167 (498)
T COG2939 100 NRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPV-----GTG------FSRA-LGDE 167 (498)
T ss_pred CCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCc-----ccC------cccc-cccc
Confidence 58999999999999887765433210 0112444455331 111 1111 1111
Q ss_pred CCCchhhHHHHHHHHH----HHhccC-CCCceEEEEEechhHHHHHHHHHhc
Q 025121 95 GPEDWEGLDASAAHIA----NLLSTE-PADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 95 ~~~~~~~~~~~~~~~~----~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
...+...+.+++..+. +.+.+. ....+.+|+|.|+||+-+..+|...
T Consensus 168 ~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L 219 (498)
T COG2939 168 KKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHEL 219 (498)
T ss_pred cccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHH
Confidence 2222333333333333 333222 1123899999999999888888743
|
|
| >KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.94 E-value=0.087 Score=44.71 Aligned_cols=63 Identities=17% Similarity=0.105 Sum_probs=46.9
Q ss_pred CCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC------HH---HHHHHHHHHHHhcCcC
Q 025121 188 SLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV------PK---EMDEVCNWLTARLGLE 253 (257)
Q Consensus 188 ~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~------~~---~~~~~~~~l~~~l~~~ 253 (257)
-.|+.|+...-|+.. +....++.+++..|. .+++.++++.-|.+. +| .-+.-++-|+..|...
T Consensus 787 LPp~~i~ac~mDP~L--DD~vmfA~kLr~lG~-~v~l~vle~lPHGFLnft~ls~E~~~~~~~CI~rl~~~L~~~ 858 (880)
T KOG4388|consen 787 LPPVHIVACAMDPML--DDSVMFARKLRNLGQ-PVTLRVLEDLPHGFLNFTALSRETRQAAELCIERLRLVLTPP 858 (880)
T ss_pred CCCceEEEeccCcch--hHHHHHHHHHHhcCC-ceeehhhhcCCccceeHHhhCHHHHHHHHHHHHHHHHHhCCC
Confidence 367999999999884 457779999999885 899999999999876 22 3345556666665543
|
|
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=93.66 E-value=1 Score=32.59 Aligned_cols=63 Identities=14% Similarity=0.084 Sum_probs=40.8
Q ss_pred CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEecc-CCCCchhhhhccccchHHHhhhcCCCEEEEccC
Q 025121 119 DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG-WLPGSRNLRNKIEGSHEAARRAASLPILLTHGL 197 (257)
Q Consensus 119 ~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~G~ 197 (257)
..++.++|||+|+.++-..+... ...+..++++.. -+.... . .........++...+.
T Consensus 108 ~~~~tv~GHSYGS~v~G~A~~~~-----------~~~vddvv~~GSPG~g~~~-a---------~~l~~~~~~v~a~~a~ 166 (177)
T PF06259_consen 108 DAHLTVVGHSYGSTVVGLAAQQG-----------GLRVDDVVLVGSPGMGVDS-A---------SDLGVPPGHVYAMTAP 166 (177)
T ss_pred CCCEEEEEecchhHHHHHHhhhC-----------CCCcccEEEECCCCCCCCC-H---------HHcCCCCCcEEEeeCC
Confidence 34999999999999999998742 456777776643 332211 0 1112223568888888
Q ss_pred CCCcc
Q 025121 198 CDDVV 202 (257)
Q Consensus 198 ~D~~v 202 (257)
.|.+-
T Consensus 167 ~D~I~ 171 (177)
T PF06259_consen 167 GDPIA 171 (177)
T ss_pred CCCcc
Confidence 88764
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >KOG4569 consensus Predicted lipase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.51 E-value=0.13 Score=41.55 Aligned_cols=22 Identities=27% Similarity=0.315 Sum_probs=19.7
Q ss_pred ceEEEEEechhHHHHHHHHHhc
Q 025121 120 VKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 120 ~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
-+|.+.|||+||.+|...|...
T Consensus 171 ~~i~vTGHSLGgAlA~laa~~i 192 (336)
T KOG4569|consen 171 YSIWVTGHSLGGALASLAALDL 192 (336)
T ss_pred cEEEEecCChHHHHHHHHHHHH
Confidence 3999999999999999998854
|
|
| >PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE) | Back alignment and domain information |
|---|
Probab=92.99 E-value=0.57 Score=35.44 Aligned_cols=44 Identities=25% Similarity=0.178 Sum_probs=32.1
Q ss_pred hhhHHHHHHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhcc
Q 025121 99 WEGLDASAAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCA 142 (257)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~ 142 (257)
..++.+-++.+.+.+.... ..++++++|+|+|+.++...+.+..
T Consensus 26 ~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~ 70 (225)
T PF08237_consen 26 DESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLA 70 (225)
T ss_pred chHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHH
Confidence 3455666666666665532 3459999999999999999988753
|
A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands []. |
| >PF03283 PAE: Pectinacetylesterase | Back alignment and domain information |
|---|
Probab=92.49 E-value=4.8 Score=32.97 Aligned_cols=23 Identities=26% Similarity=0.244 Sum_probs=19.3
Q ss_pred CCceEEEEEechhHHHHHHHHHh
Q 025121 118 ADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 118 ~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
..++++|.|.|.||..++..+-.
T Consensus 154 ~a~~vlltG~SAGG~g~~~~~d~ 176 (361)
T PF03283_consen 154 NAKQVLLTGCSAGGLGAILHADY 176 (361)
T ss_pred ccceEEEeccChHHHHHHHHHHH
Confidence 34699999999999999987654
|
|
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=92.44 E-value=1.1 Score=35.88 Aligned_cols=64 Identities=20% Similarity=0.256 Sum_probs=48.1
Q ss_pred CCCEEEEccCCCCcccchhhHHHHHHhhhc---------------Cc----ee-eEEEEecCCCCccCHHHHHHHHHHHH
Q 025121 188 SLPILLTHGLCDDVVPYKYGEKSANCLSIS---------------GF----RH-LTFKSFEGLGHYTVPKEMDEVCNWLT 247 (257)
Q Consensus 188 ~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~---------------~~----~~-~~~~~~~g~~H~~~~~~~~~~~~~l~ 247 (257)
.++||+..|+.|-+|+.-..+.+.+.|.-. |. .+ .++..+.++||.+. ..++...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 479999999999999998888888888621 11 12 77888889999985 46666666666
Q ss_pred HhcCc
Q 025121 248 ARLGL 252 (257)
Q Consensus 248 ~~l~~ 252 (257)
+++..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 66543
|
|
| >PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase | Back alignment and domain information |
|---|
Probab=92.41 E-value=0.24 Score=36.05 Aligned_cols=63 Identities=13% Similarity=0.132 Sum_probs=44.3
Q ss_pred hcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC-------HHHHHHHHHHHHH
Q 025121 186 AASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-------PKEMDEVCNWLTA 248 (257)
Q Consensus 186 ~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-------~~~~~~~~~~l~~ 248 (257)
..+++++-|=|+.|.++...+.....+.+..........++.+|+||.-. .+....+.+||.+
T Consensus 132 I~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 132 IRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 35788999999999999987765555544432222557888899999743 4556777777764
|
This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. |
| >PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase | Back alignment and domain information |
|---|
Probab=91.98 E-value=0.59 Score=37.51 Aligned_cols=43 Identities=12% Similarity=0.053 Sum_probs=30.7
Q ss_pred hhhHHHHHHHHHHHhccCC--CCceEEEEEechhHHHHHHHHHhc
Q 025121 99 WEGLDASAAHIANLLSTEP--ADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
.....+....|..+++... ...+++|.|.|+||.-+-.++...
T Consensus 28 ~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I 72 (319)
T PLN02213 28 ISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEI 72 (319)
T ss_pred HHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHH
Confidence 3444666777777775542 345899999999999888777653
|
|
| >KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=90.28 E-value=8.1 Score=30.86 Aligned_cols=60 Identities=15% Similarity=0.105 Sum_probs=39.6
Q ss_pred hcCCCEEEEccCCCCcccchhhHHHHHHhhhcCc------------------------eeeEEEEecCCCCccCHHHHHH
Q 025121 186 AASLPILLTHGLCDDVVPYKYGEKSANCLSISGF------------------------RHLTFKSFEGLGHYTVPKEMDE 241 (257)
Q Consensus 186 ~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~------------------------~~~~~~~~~g~~H~~~~~~~~~ 241 (257)
...+.|.+..|..|-+|.....+...+++.-... ++..+..++-+||.+..+..+.
T Consensus 323 ~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~s~~l~gy~ktyknl~f~wilraghmvp~Dnp~~ 402 (414)
T KOG1283|consen 323 NNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITVSRVLEGYEKTYKNLSFFWILRAGHMVPADNPAA 402 (414)
T ss_pred hCCceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccceeecchhhhhhccceeEEeecccCcccCCCHHH
Confidence 3457888999999988887776666666542111 2456667777888877665555
Q ss_pred HHHH
Q 025121 242 VCNW 245 (257)
Q Consensus 242 ~~~~ 245 (257)
+..-
T Consensus 403 a~hm 406 (414)
T KOG1283|consen 403 ASHM 406 (414)
T ss_pred Hhhh
Confidence 4443
|
|
| >KOG2029 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=90.19 E-value=1.6 Score=37.55 Aligned_cols=39 Identities=23% Similarity=0.151 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHhcc-CCC-CceEEEEEechhHHHHHHHHHh
Q 025121 102 LDASAAHIANLLST-EPA-DVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 102 ~~~~~~~~~~~~~~-~~~-~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
++.-...+.+.+.+ ... +.+|+.+||||||.++=.++..
T Consensus 506 l~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLld 546 (697)
T KOG2029|consen 506 LAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLD 546 (697)
T ss_pred HHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHH
Confidence 33333344444433 333 4589999999999888777764
|
|
| >KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=89.83 E-value=2.7 Score=35.43 Aligned_cols=93 Identities=16% Similarity=0.115 Sum_probs=51.0
Q ss_pred ceEEEEEccCCC---CccchHHHhhcCC-CCceEEEccCCCCCCcccCCCCcccccccC-CCCCCCCCCchhhHHHHHHH
Q 025121 34 QATIVWLHGLGD---NGSSWSQLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDV-GELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 34 ~~~vi~~HG~~~---~~~~~~~~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~-~~~~~~~~~~~~~~~~~~~~ 108 (257)
.-++|++-|.|- ++.---.-.+.|+ ..+..|+.+++|--.++. ... +..+.+.....-+...++.+
T Consensus 135 ~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGF---------L~l~~~~eaPGNmGl~DQqLAl~W 205 (601)
T KOG4389|consen 135 LTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGF---------LYLPGHPEAPGNMGLLDQQLALQW 205 (601)
T ss_pred ceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceE---------EecCCCCCCCCccchHHHHHHHHH
Confidence 348899999663 2222112235555 346677777765322211 111 11222223334444556677
Q ss_pred HHHHhccCC-CCceEEEEEechhHHHHH
Q 025121 109 IANLLSTEP-ADVKVGIGGFSMGAAVAL 135 (257)
Q Consensus 109 ~~~~~~~~~-~~~~i~l~G~S~Gg~~a~ 135 (257)
+.+.+.... ++.+|.|+|.|.|+.-..
T Consensus 206 V~~Ni~aFGGnp~~vTLFGESAGaASv~ 233 (601)
T KOG4389|consen 206 VQENIAAFGGNPSRVTLFGESAGAASVV 233 (601)
T ss_pred HHHhHHHhCCCcceEEEeccccchhhhh
Confidence 777776653 446999999999986443
|
|
| >PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB) | Back alignment and domain information |
|---|
Probab=89.01 E-value=1.1 Score=38.63 Aligned_cols=48 Identities=19% Similarity=0.341 Sum_probs=35.9
Q ss_pred hcCCCEEEEccCCCCcccchhhHHHHHHhhh-c-Cc-eeeEEEEecCCCCc
Q 025121 186 AASLPILLTHGLCDDVVPYKYGEKSANCLSI-S-GF-RHLTFKSFEGLGHY 233 (257)
Q Consensus 186 ~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~-~-~~-~~~~~~~~~g~~H~ 233 (257)
...+|++++||..|.++|..+..+-+-.+.. . +. ...+++++.++.|+
T Consensus 553 L~GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHf 603 (690)
T PF10605_consen 553 LHGKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHF 603 (690)
T ss_pred cCCCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeec
Confidence 3478999999999999999877555555443 2 22 36789999988885
|
These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space |
| >PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein | Back alignment and domain information |
|---|
Probab=88.93 E-value=0.63 Score=30.88 Aligned_cols=26 Identities=19% Similarity=0.308 Sum_probs=13.9
Q ss_pred CCCCCCceEEEEEccCCCCccchHHH
Q 025121 28 RPKGKHQATIVWLHGLGDNGSSWSQL 53 (257)
Q Consensus 28 ~~~~~~~~~vi~~HG~~~~~~~~~~~ 53 (257)
.+.++...+||++||+.++--.|..+
T Consensus 86 rs~~~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 86 RSKRPNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp --S-TT-EEEEEE--SS--GGGGHHH
T ss_pred eCCCCCCeEEEEECCCCccHHhHHhh
Confidence 44455566999999999998877654
|
Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A. |
| >KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only] | Back alignment and domain information |
|---|
Probab=88.37 E-value=1.8 Score=36.37 Aligned_cols=111 Identities=14% Similarity=0.040 Sum_probs=67.2
Q ss_pred CCCceEEEEEccCCCCccch--------HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhH
Q 025121 31 GKHQATIVWLHGLGDNGSSW--------SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGL 102 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~--------~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 102 (257)
.+..|+.|+|-|=|.....| ..+++. .|..|+..++|.-|.+..-+ ..+. .....-+.
T Consensus 83 ~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~Akk---fgA~v~~lEHRFYG~S~P~~----------~~st-~nlk~LSs 148 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKK---FGATVFQLEHRFYGQSSPIG----------DLST-SNLKYLSS 148 (514)
T ss_pred cCCCceEEEEcCCCCCCCCccccCcchHHHHHHH---hCCeeEEeeeeccccCCCCC----------CCcc-cchhhhhH
Confidence 35567788887755444333 334444 47889999988655432211 1111 11223334
Q ss_pred HHHHHHHHHHhccC---C---CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCC
Q 025121 103 DASAAHIANLLSTE---P---ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWL 166 (257)
Q Consensus 103 ~~~~~~~~~~~~~~---~---~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 166 (257)
.+++.++..+++.. . .+.+.+.+|-|+-|.++..+=. .||+.+.+.++-|+.+
T Consensus 149 ~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~-----------~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 149 LQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFRE-----------KYPELTVGSVASSAPV 207 (514)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHH-----------hCchhheeecccccce
Confidence 45555555555432 1 1238999999999999988766 5799999988877754
|
|
| >COG2830 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=84.07 E-value=1.9 Score=30.46 Aligned_cols=19 Identities=26% Similarity=0.263 Sum_probs=17.4
Q ss_pred eEEEEEechhHHHHHHHHH
Q 025121 121 KVGIGGFSMGAAVALYSAT 139 (257)
Q Consensus 121 ~i~l~G~S~Gg~~a~~~~~ 139 (257)
.+.|+.+|||-++|-+++.
T Consensus 58 hirlvAwSMGVwvAeR~lq 76 (214)
T COG2830 58 HIRLVAWSMGVWVAERVLQ 76 (214)
T ss_pred hhhhhhhhHHHHHHHHHHh
Confidence 6789999999999999987
|
|
| >COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=84.06 E-value=19 Score=28.47 Aligned_cols=62 Identities=11% Similarity=0.146 Sum_probs=42.9
Q ss_pred CCCEEEEccCCCCcccchhh---HHHHHHhhhcCceeeEEEEecCCCCccC-------HHHHHHHHHHHHHhcCc
Q 025121 188 SLPILLTHGLCDDVVPYKYG---EKSANCLSISGFRHLTFKSFEGLGHYTV-------PKEMDEVCNWLTARLGL 252 (257)
Q Consensus 188 ~~P~l~~~G~~D~~v~~~~~---~~~~~~l~~~~~~~~~~~~~~g~~H~~~-------~~~~~~~~~~l~~~l~~ 252 (257)
++-++-+-|+.|.+--..+. ..++..+++. ..+...-|+.||.-. .+...++.+|+.+.-+.
T Consensus 339 ~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~---mk~hy~qp~vGHYGVFnGsrfr~eIvPri~dFI~~~d~~ 410 (415)
T COG4553 339 NVALFTVEGENDDISGVGQTKAAHDLCSNIPED---MKQHYMQPDVGHYGVFNGSRFREEIVPRIRDFIRRYDRS 410 (415)
T ss_pred ceeEEEeecccccccccchhHHHHHHHhcChHH---HHHHhcCCCCCccceeccchHHHHHHHHHHHHHHHhCcc
Confidence 56788889999998765544 4444444443 346778899999643 45668889999886543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 257 | ||||
| 1fj2_A | 232 | Crystal Structure Of The Human Acyl Protein Thioest | 1e-25 | ||
| 4f21_A | 246 | Crystal Structure Of CarboxylesterasePHOSPHOLIPASE | 2e-20 | ||
| 1auo_A | 218 | Carboxylesterase From Pseudomonas Fluorescens Lengt | 4e-20 | ||
| 3u0v_A | 239 | Crystal Structure Analysis Of Human Lyplal1 Length | 1e-18 | ||
| 3cn7_A | 226 | Crystal Structure Analysis Of The Carboxylesterase | 3e-16 | ||
| 4ftw_A | 285 | Crystal Structure Of A Carboxyl Esterase N110cL145H | 4e-07 | ||
| 4fhz_A | 285 | Crystal Structure Of A Carboxyl Esterase At 2.0 Ang | 6e-06 |
| >pdb|1FJ2|A Chain A, Crystal Structure Of The Human Acyl Protein Thioesterase 1 At 1.5 A Resolution Length = 232 | Back alignment and structure |
|
| >pdb|4F21|A Chain A, Crystal Structure Of CarboxylesterasePHOSPHOLIPASE FAMILY PROTEIN From Francisella Tularensis Length = 246 | Back alignment and structure |
|
| >pdb|1AUO|A Chain A, Carboxylesterase From Pseudomonas Fluorescens Length = 218 | Back alignment and structure |
|
| >pdb|3U0V|A Chain A, Crystal Structure Analysis Of Human Lyplal1 Length = 239 | Back alignment and structure |
|
| >pdb|3CN7|A Chain A, Crystal Structure Analysis Of The Carboxylesterase Pa3859 From Pseudomonas Aeruginosa Pao1- Monoclinic Crystal Form Length = 226 | Back alignment and structure |
|
| >pdb|4FTW|A Chain A, Crystal Structure Of A Carboxyl Esterase N110cL145H AT 2.3 ANGSTROM Resolution Length = 285 | Back alignment and structure |
|
| >pdb|4FHZ|A Chain A, Crystal Structure Of A Carboxyl Esterase At 2.0 Angstrom Resolution Length = 285 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 Length = 232 | Back alignment and structure |
|---|
Score = 237 bits (606), Expect = 4e-79
Identities = 71/231 (30%), Positives = 111/231 (48%), Gaps = 21/231 (9%)
Query: 25 HVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTA 84
+V K A +++LHGLGD G W++ + +IK+ICP AP RPV + +
Sbjct: 14 AIVPAARKATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPS 73
Query: 85 WFDVGELSDDGPEDWEGLDASAAHIANLLSTEPADV----KVGIGGFSMGAAVALYSATC 140
WFD+ LS D ED G+ +A +I L+ E + ++ +GGFS G A++LY+A
Sbjct: 74 WFDIIGLSPDSQEDESGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALT 133
Query: 141 CALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDD 200
L V LS WLP + G + IL HG CD
Sbjct: 134 -----------TQQKLAGVTALSCWLPLRASFPQGPIGG-----ANRDISILQCHGDCDP 177
Query: 201 VVPYKYGEKSANCL-SISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250
+VP +G + L ++ ++TFK++EG+ H + +EM +V ++ L
Sbjct: 178 LVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEMMDVKQFIDKLL 228
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* Length = 218 | Back alignment and structure |
|---|
Score = 236 bits (604), Expect = 5e-79
Identities = 64/235 (27%), Positives = 106/235 (45%), Gaps = 25/235 (10%)
Query: 23 RTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLP--LPNIKWICPTAPTRPVAILGGF 80
+++P A ++WLHGLG + + + E+L L +++ P APTRPV I GG+
Sbjct: 3 EPLILQPAKPADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGY 62
Query: 81 PCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPA----DVKVGIGGFSMGAAVALY 136
+W+D+ +S E L+ SA + +L+ + ++ + GFS G AV +
Sbjct: 63 EMPSWYDIKAMSPARSISLEELEVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFH 122
Query: 137 SATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHG 196
+A + L V+ LS + P E + +P L HG
Sbjct: 123 TAFIN----------WQGPLGGVIALSTYAP-------TFGDELELSASQQRIPALCLHG 165
Query: 197 LCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251
DDVV G + L G T++ + +GH +P+E+ ++ WL ARLG
Sbjct: 166 QYDDVVQNAMGRSAFEHLKSRGVTV-TWQEY-PMGHEVLPQEIHDIGAWLAARLG 218
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} Length = 239 | Back alignment and structure |
|---|
Score = 235 bits (601), Expect = 3e-78
Identities = 61/243 (25%), Positives = 109/243 (44%), Gaps = 26/243 (10%)
Query: 23 RTHVVRPKGKHQATIVWLHGLGDNGSSWSQLL-----ESLPLPNIKWICPTAPTRPVAIL 77
+ +V P G+H A++++LHG GD+G + + L +IK I PTAP R +
Sbjct: 12 QRCIVSPAGRHSASLIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPM 71
Query: 78 GGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPADV----KVGIGGFSMGAAV 133
G WFD ++++D PE E +D + +L+ E ++ IGGFSMG +
Sbjct: 72 KGGISNVWFDRFKITNDCPEHLESIDVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCM 131
Query: 134 ALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILL 193
A++ A + ++ V LS +L + + ++ S+ +
Sbjct: 132 AMHLAYR-----------NHQDVAGVFALSSFLNKASAVYQALQKSN-----GVLPELFQ 175
Query: 194 THGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLGLE 253
HG D++V + + E++ + L G F SF + H E+D + W+ +L E
Sbjct: 176 CHGTADELVLHSWAEETNSMLKSLGVTT-KFHSFPNVYHELSKTELDILKLWILTKLPGE 234
Query: 254 GSR 256
+
Sbjct: 235 MEK 237
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* Length = 226 | Back alignment and structure |
|---|
Score = 234 bits (598), Expect = 6e-78
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 26/231 (11%)
Query: 26 VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLP--LPNIKWICPTAPTRPVAILGGFPCT 83
++ A I+WLHGLG + + + + E+L LP+ ++I P AP++ V + GG+
Sbjct: 16 LILDAPNADACIIWLHGLGADRTDFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMP 75
Query: 84 AWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPAD----VKVGIGGFSMGAAVALYSAT 139
+W+D+ S D + L+ASA + L+ + A ++ + GFS G AV L++A
Sbjct: 76 SWYDILAFSPARAIDEDQLNASADQVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAF 135
Query: 140 CCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCD 199
Y L V+ LS + P +L R +P+L HG D
Sbjct: 136 RR----------YAQPLGGVLALSTYAPTFDDL--------ALDERHKRIPVLHLHGSQD 177
Query: 200 DVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250
DVV G + + L G + + +GH +E+ ++ WL RL
Sbjct: 178 DVVDPALGRAAHDALQAQGVEV-GWHDY-PMGHEVSLEEIHDIGAWLRKRL 226
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} Length = 209 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 9e-33
Identities = 44/230 (19%), Positives = 72/230 (31%), Gaps = 37/230 (16%)
Query: 25 HVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTA 84
+V + K A ++ LH G + ++ E + P+ + + G
Sbjct: 7 YVFKAGRKDLAPLLLLHSTGGDEHQLVEIAEMIA-PSHPILSIRG---RINEQGVN---R 59
Query: 85 WFDVGELSDDGPE--DWEGLDASAAHIANLLSTEPADV-----KVGIGGFSMGAAVALYS 137
+F + L E D E LD + + +S K+ G+S GA VAL
Sbjct: 60 YFKLRGLGGFTKENFDLESLDEETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALN- 118
Query: 138 ATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGL 197
R N ++ G E + + L++
Sbjct: 119 ----MFLRGKI------NFDKIIAFHGMQL----------EDFEQTVQLDDKHVFLSYAP 158
Query: 198 CDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLT 247
D +VP K L SG + L GH +E+ WLT
Sbjct: 159 NDMIVPQKNFGDLKGDLEDSGCQ-LEIYESSL-GHQLTQEEVLAAKKWLT 206
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 Length = 226 | Back alignment and structure |
|---|
Score = 114 bits (286), Expect = 3e-31
Identities = 42/257 (16%), Positives = 67/257 (26%), Gaps = 43/257 (16%)
Query: 3 YSHQTVGSGSRAARRTFEFGRT----HVVR-PKGKHQATIVWLHGLGDNGSSWSQLLESL 57
+ H SG F HV + K + ++ LHG G N L E +
Sbjct: 2 HHHHHHSSGVDLGTENLYFQSNAMMKHVFQKGKDTSKPVLLLLHGTGGNELDLLPLAEIV 61
Query: 58 PLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL---- 113
+ G P +F +G D E L + L
Sbjct: 62 D-SEASVLSVRGNVLE----NGMP--RFFR---RLAEGIFDEEDLIFRTKELNEFLDEAA 111
Query: 114 -STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL 172
+ + G+S GA +A Y N L+ V +P
Sbjct: 112 KEYKFDRNNIVAIGYSNGANIAASLLF-----HYEN------ALKGAVLHHPMVPRR--- 157
Query: 173 RNKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGH 232
A + + G D + E+ L + +T GH
Sbjct: 158 -------GMQLANLAGKSVFIAAGTNDPICSSAESEELKVLLENANAN-VTMHWENR-GH 208
Query: 233 YTVPKEMDEVCNWLTAR 249
E+++ W
Sbjct: 209 QLTMGEVEKAKEWYDKA 225
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 Length = 223 | Back alignment and structure |
|---|
Score = 113 bits (283), Expect = 1e-30
Identities = 34/233 (14%), Positives = 64/233 (27%), Gaps = 39/233 (16%)
Query: 25 HVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTA 84
++ + + + LHG G + ++ L + P + + GF
Sbjct: 21 RLLGAGKESRECLFLLHGSGVDETTLVPLARRIA-PTATLVAARG---RIPQEDGF---R 73
Query: 85 WFDVGELSDDGPEDWEGLDASAAHIANLLSTE-----PADVKVGIGGFSMGAAVALYSAT 139
WF+ D + + + A A A + G+S GA +
Sbjct: 74 WFE---RIDPTRFEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSS--- 127
Query: 140 CCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCD 199
+ + +R L H A A + L+ G D
Sbjct: 128 --LMLLHPG------IVRLAALLRPMPV----------LDHVPATDLAGIRTLIIAGAAD 169
Query: 200 DVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLGL 252
+ + LS G + + GH + V WL + +
Sbjct: 170 ETYG-PFVPALVTLLSRHGAE-VDARIIPS-GHDIGDPDAAIVRQWLAGPIAI 219
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 Length = 251 | Back alignment and structure |
|---|
Score = 113 bits (283), Expect = 2e-30
Identities = 40/230 (17%), Positives = 66/230 (28%), Gaps = 36/230 (15%)
Query: 25 HVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTA 84
H R V LHG G + + + L P + P +
Sbjct: 53 HKSRAGVAGAPLFVLLHGTGGDENQFFDFGARLL-PQATILSPVGD------VSEHGAAR 105
Query: 85 WFDVGELSDDGPEDWEGLDASAAHIANLLSTEPADV---KVGIGGFSMGAAVALYSATCC 141
+F + +G D L+ + +A+ + V GFS GA +
Sbjct: 106 FFR---RTGEGVYDMVDLERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLI-- 160
Query: 142 ALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDV 201
A V + +P + + + +L+T G D +
Sbjct: 161 ---EQPE------LFDAAVLMHPLIP----------FEPKISPAKPTRRVLITAGERDPI 201
Query: 202 VPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251
P + + L G G GH E+D V +L A G
Sbjct: 202 CPVQLTKALEESLKAQGGTV-ETVWHPG-GHEIRSGEIDAVRGFLAAYGG 249
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} Length = 243 | Back alignment and structure |
|---|
Score = 69.6 bits (169), Expect = 2e-14
Identities = 37/238 (15%), Positives = 69/238 (28%), Gaps = 37/238 (15%)
Query: 40 LHGLGDNGSS----WSQLLESLPLPNIKWICPTAPTR--PVAILGGFPCTAWFDVGE--- 90
LHG NG S + + L N++ AP + W +
Sbjct: 11 LHGFLQNGKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADV 70
Query: 91 ----LSDDGPEDWEGLDASAAHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGR 145
+ + + + P D GI G S GAA++ +
Sbjct: 71 NRAWFYHSEISHELDISEGLKSVVDHIKANGPYD---GIVGLSQGAALSSI-----ITNK 122
Query: 146 YGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAA-------SLPILLTHGLC 198
+P + + V +SG+ + + E R + ++ +G
Sbjct: 123 ISELVPDHPQFKVSVVISGYSFTEPDPEHPGELRITEKFRDSFAVKPDMKTKMIFIYGAS 182
Query: 199 DDVVPYKYGEKSANCLSISGF---RHLTFKSFEGLGHYTVP---KEMDEVCNWLTARL 250
D VP + + + + G GH VP + + +T+ L
Sbjct: 183 DQAVPSVRSKYLYDIYLKAQNGNKEKVLAYEHPG-GHM-VPNKKDIIRPIVEQITSSL 238
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 Length = 238 | Back alignment and structure |
|---|
Score = 64.0 bits (155), Expect = 2e-12
Identities = 43/228 (18%), Positives = 62/228 (27%), Gaps = 18/228 (7%)
Query: 29 PKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDV 88
P+ A ++ LHGL + LL + AP + V
Sbjct: 20 PEAPK-ALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYV 78
Query: 89 GELSDDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVAL-----YSATCCAL 143
E+ E A + + + G S+GA VA L
Sbjct: 79 EEVYRVALGFKEEARRVAEEAERRF-----GLPLFLAGGSLGAFVAHLLLAEGFRPRGVL 133
Query: 144 GRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVP 203
G+G P + + L +P+L HG D +VP
Sbjct: 134 AFIGSGFPMKL------PQGQVVEDPGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVP 187
Query: 204 YKYGEKSANCLSISGF-RHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250
EK+ L L EG GH P +L L
Sbjct: 188 LARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWL 235
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A Length = 380 | Back alignment and structure |
|---|
Score = 53.5 bits (128), Expect = 2e-08
Identities = 36/201 (17%), Positives = 64/201 (31%), Gaps = 31/201 (15%)
Query: 37 IVWLHGLGDNGSS-WSQLLESLPLPNIKWICPTAPTRPVAIL---GGFPCTAWFDVGELS 92
+V+LHG G+ G+ + Q+ + + W P + P ++W +
Sbjct: 177 VVFLHGAGERGTDNYLQVAGNRG--AVVWAQPRYQVVHPCFVLAPQCPPNSSWSTLFTDR 234
Query: 93 DDGPEDWEGLDASAAHIANLLSTEPADV-KVGIGGFSMGAAVALYSATCCALGRYGNGIP 151
++ + L A I LL D ++ I G SMG + +
Sbjct: 235 ENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIM-----EFPELF- 288
Query: 152 YYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSA 211
A + + G G R +PI + H D VVP +
Sbjct: 289 -----AAAIPICGG------------GDVSKVERIKDIPIWVFHAEDDPVVPVENSRVLV 331
Query: 212 NCLSISGFRHLTFKSFEGLGH 232
L+ G + + +E
Sbjct: 332 KKLAEIGGKV-RYTEYEKGFM 351
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 2e-08
Identities = 32/278 (11%), Positives = 68/278 (24%), Gaps = 88/278 (31%)
Query: 21 FGRTHVVRPKGKHQATIVWLHGLGDNGSSW-----SQLLESLPLPNIKWICPTAPTRPVA 75
+ + + + +HG + + L +
Sbjct: 14 NAYLDMPKNNPEKCPLCIIIHGFTGHSEERHIVAVQETLNEI------------------ 55
Query: 76 ILGGFPCTAWFDV-------GELSDDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFS 128
G D+ G+ D W + A + + + G S
Sbjct: 56 ---GVATLR-ADMYGHGKSDGKFEDHTLFKWLT-NILAV--VDYAKKLDFVTDIYMAGHS 108
Query: 129 MGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG------WLPGSRNLRNKIE----- 177
G + +A + I +A++ LS L K +
Sbjct: 109 QGGLSVMLAA-----AMERDII------KALIPLSPAAMIPEIARTGELLGLKFDPENIP 157
Query: 178 -------------------GSHEAARRAASL--PILLTHGLCDDVVPYKYGEKSANCLSI 216
+ P+L+ HG D+ VPY+ +
Sbjct: 158 DELDAWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQY-- 215
Query: 217 SGFRHLTFKSFEGLGH-YTVPKEM--DEVCNWLTARLG 251
++ + G H Y E+ + V ++ ++
Sbjct: 216 ---KNCKLVTIPGDTHCYDHHLELVTEAVKEFMLEQIA 250
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A Length = 247 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 1e-07
Identities = 36/243 (14%), Positives = 61/243 (25%), Gaps = 50/243 (20%)
Query: 29 PKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDV 88
G+ ++ LHG N + L L P G
Sbjct: 13 EAGER--AVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYK--------GH-GVPP--- 58
Query: 89 GELSDDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSAT--------- 139
EL GP+DW + L + + K+ + G S+G +L
Sbjct: 59 EELVHTGPDDWW---QDVMNGYEFLKNKGYE-KIAVAGLSLGGVFSLKLGYTVPIEGIVT 114
Query: 140 -CCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEA---------------A 183
C + Y L S + +
Sbjct: 115 MCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPMKTLKALQELIADV 174
Query: 184 RRAAS---LPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHY-TVPKEM 239
R P + D+++ N + K +E GH T+ +E
Sbjct: 175 RDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESP---VKQIKWYEQSGHVITLDQEK 231
Query: 240 DEV 242
D++
Sbjct: 232 DQL 234
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 1e-07
Identities = 47/260 (18%), Positives = 79/260 (30%), Gaps = 70/260 (26%)
Query: 25 HVVRPKGKHQATIVWLHGLGDN--GSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPC 82
P G+ + HG N S ++ SL NI +
Sbjct: 37 TREEPFGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVR---------------- 80
Query: 83 TAWFD-------VGELSDDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVAL 135
FD G+ + + DA+A I N + T+P + + G + G VA
Sbjct: 81 ---FDFNGHGDSDGKFENMTVLNEIE-DANA--ILNYVKTDPHVRNIYLVGHAQGGVVAS 134
Query: 136 YSATCCALGRYGNGIPYYV---------------NLRAVVGLSGWLPGSRNLRNKIEG-- 178
A G Y + I V N + V +P ++ G
Sbjct: 135 MLA-----GLYPDLIKKVVLLAPAATLKGDALEGNTQGVTYNPDHIPDRLPFKDLTLGGF 189
Query: 179 ------SHEAARRAASL--PILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGL 230
+A P+ L HG D VV +K +++ T EG
Sbjct: 190 YLRIAQQLPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQI-----YQNSTLHLIEGA 244
Query: 231 GH-YTVPKE---MDEVCNWL 246
H ++ + ++ ++L
Sbjct: 245 DHCFSDSYQKNAVNLTTDFL 264
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} Length = 245 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 2e-07
Identities = 36/244 (14%), Positives = 63/244 (25%), Gaps = 71/244 (29%)
Query: 31 GKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDV-- 88
K T++++HG G N + +L + L + C D+
Sbjct: 13 KKSPNTLLFVHGSGCNLKIFGELEKYLE--------------------DYNCILL-DLKG 51
Query: 89 -GELSDDGPEDWEGLDASAAHIANL---LSTEPADVKVGIGGFSMGAAVALYSAT----- 139
GE S G + ++AN + + G+SMG A+ L A
Sbjct: 52 HGE-S-KGQCPS-TVYGYIDNVANFITNSEVTKHQKNITLIGYSMGGAIVLGVALKKLPN 108
Query: 140 ------CCALGRYGNGIPYYVNLRAVVGLSGWL----------PGSRNLRNKIEGSHEAA 183
R+ ++ L P S +E +
Sbjct: 109 VRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLECIGGIDNPLSEKYFETLEKDPDIM 168
Query: 184 RRAA---------------SLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFE 228
+P+ + + +Y E + S K FE
Sbjct: 169 INDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEVENS-----ELKIFE 223
Query: 229 GLGH 232
H
Sbjct: 224 TGKH 227
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 48.0 bits (114), Expect = 8e-07
Identities = 34/245 (13%), Positives = 68/245 (27%), Gaps = 57/245 (23%)
Query: 29 PKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDV 88
+V LH + + + + +L P G D
Sbjct: 19 EGTDT--GVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLFS--------GHGTVEPLD- 67
Query: 89 GELSDDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGN 148
L+ P+ W S+A +A++ + KV + G S+G A+ +
Sbjct: 68 -ILTKGNPDIW--WAESSAAVAHMTAKYA---KVFVFGLSLGGIFAMKALE-----TLPG 116
Query: 149 GI-------PYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAA-------------- 187
P +V G+L + + S E+ + A
Sbjct: 117 ITAGGVFSSPILPGKHHLV--PGFLKYAEYMNRLAGKSDESTQILAYLPGQLAAIDQFAT 174
Query: 188 ---------SLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHY-TVPK 237
P + D++V + + + L + + F ++ H TV
Sbjct: 175 TVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINA--ARVDFHWYDDAKHVITVNS 232
Query: 238 EMDEV 242
+
Sbjct: 233 AHHAL 237
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 Length = 386 | Back alignment and structure |
|---|
Score = 48.1 bits (114), Expect = 1e-06
Identities = 30/176 (17%), Positives = 56/176 (31%), Gaps = 18/176 (10%)
Query: 96 PEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSAT-------CCALG---- 144
D+E ++ + L D +G+ G S+G AL SA C + G
Sbjct: 200 AGDYEKYTSAVVDLLTKLEAIRND-AIGVLGRSLGGNYALKSAACEPRLAACISWGGFSD 258
Query: 145 ---RYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDV 201
+ + V + ++ +E ++ A P + HG+ D
Sbjct: 259 LDYWDLETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIAC--PTYILHGV-HDE 315
Query: 202 VPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLGLEGSRA 257
VP + + + + K + H + E+ +WL L A
Sbjct: 316 VPLSFVDTVLELVPAEHLNLVVEKDGDHCCHNLGIRPRLEMADWLYDVLVAGKKVA 371
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 Length = 305 | Back alignment and structure |
|---|
Score = 46.2 bits (109), Expect = 4e-06
Identities = 32/239 (13%), Positives = 57/239 (23%), Gaps = 62/239 (25%)
Query: 29 PKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDV 88
TI+ G ++ L E L GF +D
Sbjct: 30 NVPFKNNTILIASGFARRMDHFAGLAEYL------------------STNGFHVFR-YDS 70
Query: 89 --------GELSDDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATC 140
G + + S + + L T+ +G+ S+ A VA +
Sbjct: 71 LHHVGLSSGSIDEFTMTTG---KNSLCTVYHWLQTKGTQ-NIGLIAASLSARVAYEVISD 126
Query: 141 CALGRYGNGIPYYV-------------------NLRAVVGLSGWLPGSRNL--------R 173
L + L + G GS
Sbjct: 127 LELSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHW 186
Query: 174 NKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGH 232
+ ++ + + S+P++ DD V + + H S G H
Sbjct: 187 DTLDSTLDKVANT-SVPLIAFTANNDDWVKQEEVYDMLAHI---RTGHCKLYSLLGSSH 241
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} Length = 269 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 6e-06
Identities = 22/103 (21%), Positives = 35/103 (33%), Gaps = 19/103 (18%)
Query: 36 TIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDG 95
+V+LHG + ++ +E N I P G GE
Sbjct: 18 VLVFLHGFLSDSRTYHNHIEKFT-DNYHVITIDLP--------GH--------GE-DQSS 59
Query: 96 PEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSA 138
++ D + +L + + G+SMG VALY A
Sbjct: 60 MDETWNFDYITTLLDRILDKYKDK-SITLFGYSMGGRVALYYA 101
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} Length = 290 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 1e-05
Identities = 37/250 (14%), Positives = 71/250 (28%), Gaps = 53/250 (21%)
Query: 26 VVRPKGKHQATIVWLHGLG---DNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPC 82
++ P G ++++HG G + ++ L G C
Sbjct: 22 LLTPTGM--PGVLFVHGWGGSQHHSLVRAREAVGL---------------------GCIC 58
Query: 83 TAWFDV-------GELSDDGPEDWEGLDASAA--HIANLLSTEPADVKVGIGGFSMGAAV 133
FD+ D AA +A+L + + + G S G +
Sbjct: 59 MT-FDLRGHEGYASMRQSVTRAQNL-DDIKAAYDQLASLPYVDAH--SIAVVGLSYGGYL 114
Query: 134 ALYSAT------CCALGRYGNGIPYYVNLR-AVVGLSGWLPGSRNLRNKIEGSHEAARRA 186
+ ++ + ++ + R + AA
Sbjct: 115 SALLTRERPVEWLALRSPALYKDAHWDQPKVSLNADPDLMDYRRRALAPGDNLALAACAQ 174
Query: 187 ASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKE-----MDE 241
+LL D +VP+ A+ + + R LT + G H KE
Sbjct: 175 YKGDVLLVEAENDVIVPHPVMRNYADAFTNA--RSLTSRVIAGADHALSVKEHQQEYTRA 232
Query: 242 VCNWLTARLG 251
+ +WLT +
Sbjct: 233 LIDWLTEMVV 242
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} Length = 422 | Back alignment and structure |
|---|
Score = 44.4 bits (104), Expect = 2e-05
Identities = 35/172 (20%), Positives = 54/172 (31%), Gaps = 27/172 (15%)
Query: 92 SDDGPEDWEG--LDASAAHIANLLSTEPADV-KVGIGGFSMGAAVALYSAT--------- 139
+D P + + L+ + +L +G+ G S+GA + L A+
Sbjct: 194 FEDLPNNMDNISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKNVSATV 253
Query: 140 ---------CCALGRYGNGIPY--YVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRA-- 186
A+ + IP Y R V SG + + G +
Sbjct: 254 SINGSGISGNTAINYKHSSIPPLGYDLRRIKVAFSGLVDIVDIRNALVGGYKNPSMIPIE 313
Query: 187 -ASLPILLTHGLCDDVVP-YKYGEKSANCLSISGFRHLTFKSFEGLGHYTVP 236
A PILL G D Y + + L G + G GHY P
Sbjct: 314 KAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGHYIEP 365
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 7e-05
Identities = 23/198 (11%), Positives = 41/198 (20%), Gaps = 41/198 (20%)
Query: 87 DVGELSDDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSAT------- 139
++ DW + + L + + G SMG + LY A
Sbjct: 81 HYEDMERTTFHDW--VASVEEGYGWLKQRCQ---TIFVTGLSMGGTLTLYLAEHHPDICG 135
Query: 140 ----CCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNK---------------IEGSH 180
A+ L +N K
Sbjct: 136 IVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKELAYEKTPTASLLQLARLMA 195
Query: 181 EAARRAA--SLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHY-TVPK 237
+ + P L+ D VVP + + H T+
Sbjct: 196 QTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGI---SSTEKEIVRLRNSYHVATLDY 252
Query: 238 EMDEV----CNWLTARLG 251
+ + + G
Sbjct: 253 DQPMIIERSLEFFAKHAG 270
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 Length = 264 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 1e-04
Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 21/117 (17%)
Query: 23 RTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPC 82
+ H +P +V +HGL +G+ W +L L + P G
Sbjct: 6 QLHFAKP-TARTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLP--------GH-- 54
Query: 83 TAWFDVGELSDDGPEDWEGLDASAAHIANLLSTE-PADVKVGIGGFSMGAAVALYSA 138
G + + D + I + ++V V + G+S+G + ++
Sbjct: 55 ------GT-NPERHCD--NFAEAVEMIEQTVQAHVTSEVPVILVGYSLGGRLIMHGL 102
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} Length = 306 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 2e-04
Identities = 17/117 (14%), Positives = 34/117 (29%), Gaps = 23/117 (19%)
Query: 21 FGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPV-AI-LG 78
FG+THV+ + +V LHG + + W + + A+ +
Sbjct: 54 FGQTHVIASGPEDAPPLVLLHGALFSSTMWYPNIADW-----------SSKYRTYAVDII 102
Query: 79 GFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVAL 135
G A + ++ + K + G S+G +
Sbjct: 103 GDK---------NKSIPENVSGTRTDYANWLLDVFDNLGIE-KSHMIGLSLGGLHTM 149
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} Length = 289 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 2e-04
Identities = 30/145 (20%), Positives = 50/145 (34%), Gaps = 28/145 (19%)
Query: 1 MSYSHQTVGSGSRAARRTFEFG--RTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESL- 57
MSY QT + SR R H G+ T+V LHG G + W+ ++
Sbjct: 2 MSYQPQTEAATSRFLNVEEAGKTLRIHFND-CGQGDETVVLLHGSGPGATGWANFSRNID 60
Query: 58 PLPNIKWICPTAPTRPVAI-LGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLST- 115
PL + R + + G+ G+ SD D +A + +++
Sbjct: 61 PLVEAGY-------RVILLDCPGW--------GK-SDSVVNSGSRSDLNARILKSVVDQL 104
Query: 116 --EPADVKVGIGGFSMGAAVALYSA 138
+ G SMG ++
Sbjct: 105 DIAKIHL----LGNSMGGHSSVAFT 125
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} Length = 292 | Back alignment and structure |
|---|
Score = 40.7 bits (95), Expect = 2e-04
Identities = 24/135 (17%), Positives = 42/135 (31%), Gaps = 23/135 (17%)
Query: 6 QTVGSGSRAA--RRTFEFGRTHVVRPKGKHQATIVWLHGLGDNGSS--WSQLLESLPLPN 61
Q +G GS AA + + + V+L G G ++ ++ +++ LP +
Sbjct: 11 QQMGRGSMAALNKEMVNTLLGPIYTCHREGNPCFVFLSGAGFFSTADNFANIIDKLP-DS 69
Query: 62 IKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPADVK 121
I + AP G S + GL I +
Sbjct: 70 IGILTIDAP--------NS--------GY-SPVSNQANVGLRDWVNAILMIFEHFKFQ-S 111
Query: 122 VGIGGFSMGAAVALY 136
+ S+G AL
Sbjct: 112 YLLCVHSIGGFAALQ 126
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} Length = 272 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 3e-04
Identities = 34/249 (13%), Positives = 57/249 (22%), Gaps = 76/249 (30%)
Query: 36 TIVWLHGLGDNGSSWSQLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDD 94
I++LHGL + S E L + + I P G G SD
Sbjct: 23 PIIFLHGLSLDKQSTCLFFEPLSNVGQYQRIYLDLP--------GM--------GN-SDP 65
Query: 95 GPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSA-----------TCCAL 143
+ I + A + + G S G +A A C +
Sbjct: 66 ISPST-SDNVLETLIEAIEEIIGAR-RFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPV 123
Query: 144 GRYGNGIPYYVNLRAVVGLSGWLPGSR-------------------NLRNKIEGSHEAAR 184
+ ++ ++ + +N I +
Sbjct: 124 ITADHSKRLTGKHINILEEDINPVENKEYFADFLSMNVIINNQAWHDYQNLIIPGLQKED 183
Query: 185 RAA---------------------SLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLT 223
+ P + G D VV Y+ K N +
Sbjct: 184 KTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQLKLIN-----HNENGE 238
Query: 224 FKSFEGLGH 232
GH
Sbjct: 239 IVLLNRTGH 247
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} Length = 398 | Back alignment and structure |
|---|
Score = 40.5 bits (94), Expect = 3e-04
Identities = 33/255 (12%), Positives = 73/255 (28%), Gaps = 44/255 (17%)
Query: 30 KGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAW---- 85
A I+ + G G N + P N ++ P + G+ A
Sbjct: 116 NKPVPA-ILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIAVAVDNPA 174
Query: 86 ----FDVGELSDDGPEDWEGLDASAAHI---------------ANLLSTEPADV---KVG 123
D+ + D++ + + N + T+ + ++
Sbjct: 175 AGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQK-HIRKDRIV 233
Query: 124 IGGFSMGAAVALYSAT------CCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIE 177
+ GFS+G + T + + + +G P ++R+ I
Sbjct: 234 VSGFSLGTEPMMVLGTLDTSIYAFVYNDFLCQTQERAEVMTMPDKNGRRPFPNSIRHLIP 293
Query: 178 G------SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLG 231
+ A PI+LT G D + K+ + ++ ++
Sbjct: 294 DFWKNFNFPDIVAALAPRPIILTEGGLDRDLDLV--RKAYAIVGTPD--NVKIYHYKKFS 349
Query: 232 HYTVPKEMDEVCNWL 246
K ++ + L
Sbjct: 350 DPDTRKNVEYLPEGL 364
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* Length = 398 | Back alignment and structure |
|---|
Score = 40.5 bits (94), Expect = 4e-04
Identities = 22/113 (19%), Positives = 34/113 (30%), Gaps = 5/113 (4%)
Query: 28 RPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILG--GFPCTAW 85
R + + +V+LHG G + W L L V ++ +A
Sbjct: 46 RSRTATRLNLVFLHGSGMSKVVWEYYLPRLVA---ADAEGNYAIDKVLLIDQVNHGDSAV 102
Query: 86 FDVGELSDDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSA 138
+ G L + D L S + + G SMG AL
Sbjct: 103 RNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACD 155
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} Length = 446 | Back alignment and structure |
|---|
Score = 40.2 bits (93), Expect = 4e-04
Identities = 30/173 (17%), Positives = 49/173 (28%), Gaps = 27/173 (15%)
Query: 92 SDDGPEDWEGLDASAAHIA-NLLSTEPADV--KVGIGGFSMGAAVALYSAT--------- 139
+D P+ E L A N L + P VG+ G S G + L A+
Sbjct: 210 YEDLPKTMETLHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKGITAAV 269
Query: 140 --CCALGRYG-----NGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASL--- 189
++ G G + G ++ + + E + + +
Sbjct: 270 VINGSVANVGGTLRYKGETLPPVGVNRNRIKVTKDGYADIVDVLNSPLEGPDQKSFIPVE 329
Query: 190 ----PILLTHGLCDDVVP-YKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPK 237
L G D Y ++ L G R + GHY P
Sbjct: 330 RAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGHYIEPP 382
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* Length = 318 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 5e-04
Identities = 37/260 (14%), Positives = 70/260 (26%), Gaps = 49/260 (18%)
Query: 26 VVRPKGKHQA-TIVWLHGLGDNGSSWSQLLESLPLPNIKWIC--------PTAPTRPVAI 76
P + IV HG S ++ E + + + ++
Sbjct: 73 YAVPDKEGPHPAIVKYHGYN--ASYDGEIHEMVNWALHGYATFGMLVRGQQRSEDTSISP 130
Query: 77 LGGFPCTAWFDVGELSDD---GPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAV 133
G W G L D + + I++ + ++G+ G S G +
Sbjct: 131 HGHAL--GWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDET--RIGVTGGSQGGGL 186
Query: 134 ALYSAT------CCALGRYGNGIPYYVNLRAVVGLS--GWLPGSRNLRNKIEGSHEAARR 185
+ +A PY N + ++ + + +
Sbjct: 187 TIAAAALSDIPKAAVADY-----PYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQA 241
Query: 186 AASL--------------PILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLG 231
+L P+L++ GL D V P + N L K + G
Sbjct: 242 MKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLETKK----ELKVYRYFG 297
Query: 232 HYTVPKEMDEVCNWLTARLG 251
H +P E + L
Sbjct: 298 HEYIPAFQTEKLAFFKQILK 317
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} Length = 342 | Back alignment and structure |
|---|
Score = 39.7 bits (93), Expect = 5e-04
Identities = 16/91 (17%), Positives = 27/91 (29%), Gaps = 12/91 (13%)
Query: 176 IEGSHEAARRAA--SLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGH- 232
+ R ++P LL G D + K + T K +EG H
Sbjct: 232 LNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELA---KSQDKTLKIYEGAYHV 288
Query: 233 ----YTVPKE--MDEVCNWLTARLGLEGSRA 257
E+ W++ R G+ +
Sbjct: 289 LHKELPEVTNSVFHEINMWVSQRTATAGTAS 319
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* Length = 303 | Back alignment and structure |
|---|
Score = 39.6 bits (93), Expect = 5e-04
Identities = 16/91 (17%), Positives = 27/91 (29%), Gaps = 12/91 (13%)
Query: 176 IEGSHEAARRAA--SLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGH- 232
+ R ++P LL G D + K + T K +EG H
Sbjct: 214 LNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELA---KSQDKTLKIYEGAYHV 270
Query: 233 ----YTVPKE--MDEVCNWLTARLGLEGSRA 257
E+ W++ R G+ +
Sbjct: 271 LHKELPEVTNSVFHEINMWVSQRTATAGTAS 301
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} Length = 258 | Back alignment and structure |
|---|
Score = 39.2 bits (91), Expect = 6e-04
Identities = 37/248 (14%), Positives = 60/248 (24%), Gaps = 52/248 (20%)
Query: 9 GSGSRAARRTFEFGRTHVVRPKGKHQAT-----IVWLHGLGDNGSSWSQLLESLPLPNIK 63
SG E + RP+ Q I+W +G G S+++ LL
Sbjct: 19 RSGPYTVSSQSEGPSCRIYRPRDLGQGGVRHPVILWGNGTGAGPSTYAGLLSHW------ 72
Query: 64 WICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPADV--- 120
A V G E LD T +
Sbjct: 73 -----ASHGFVVAAAETSNAGT---------GREMLACLDYLVRENDTPYGTYSGKLNTG 118
Query: 121 KVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSH 180
+VG G S G ++ + +R + + G G
Sbjct: 119 RVGTSGHSQGGGGSIMAGQ-------------DTRVRTTAPIQPYTLG--------LGHD 157
Query: 181 EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMD 240
A++R P+ L G D + + + + H+
Sbjct: 158 SASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRRANVPVFWGE---RRYVSHFEPVGSGG 214
Query: 241 EVCNWLTA 248
TA
Sbjct: 215 AYRGPSTA 222
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* Length = 273 | Back alignment and structure |
|---|
Score = 38.8 bits (90), Expect = 8e-04
Identities = 27/134 (20%), Positives = 39/134 (29%), Gaps = 28/134 (20%)
Query: 36 TIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDG 95
V +HG G SW +L L K G
Sbjct: 6 HFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAA----------------SGTDLRK- 48
Query: 96 PEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVN 155
E+ L + L+ + AD KV + G S+G G P +
Sbjct: 49 IEELRTLYDYTLPLMELMESLSADEKVILVGHSLGGMNL---------GLAMEKYPQKI- 98
Query: 156 LRAVVGLSGWLPGS 169
A V L+ ++P S
Sbjct: 99 -YAAVFLAAFMPDS 111
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 257 | |||
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 100.0 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.98 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.98 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.97 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.97 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.97 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.97 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 99.96 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 99.95 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 99.95 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.95 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 99.95 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 99.95 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.95 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.95 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.95 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.94 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 99.94 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 99.94 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 99.94 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 99.94 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 99.94 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 99.94 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.94 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.94 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 99.94 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 99.94 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 99.94 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.93 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 99.93 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 99.93 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 99.93 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 99.93 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.93 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 99.93 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 99.93 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 99.93 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.93 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 99.93 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.93 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.93 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.93 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 99.93 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.93 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.93 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 99.93 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.93 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 99.93 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 99.93 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.93 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 99.93 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 99.93 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.93 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 99.93 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 99.93 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.93 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.93 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.93 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 99.93 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 99.93 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.93 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 99.93 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.92 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 99.92 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 99.92 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 99.92 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.92 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.92 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 99.92 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 99.92 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.92 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 99.92 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.92 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.92 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.92 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.92 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 99.92 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.92 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.92 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 99.92 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.92 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 99.92 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 99.92 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 99.92 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 99.92 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 99.92 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.92 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 99.92 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.91 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 99.91 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 99.91 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 99.91 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.91 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.91 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.91 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.91 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 99.91 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.91 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.91 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.91 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 99.91 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 99.91 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.91 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 99.91 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 99.91 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.91 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 99.91 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 99.91 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.91 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 99.91 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 99.91 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.91 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.91 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.91 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.91 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.9 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.9 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 99.9 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.9 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 99.9 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.9 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.9 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 99.9 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.9 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.9 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 99.9 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.9 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.9 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.9 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.9 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.9 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.9 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.9 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 99.9 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.9 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.89 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 99.89 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.89 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.89 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.89 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.89 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.89 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 99.89 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.89 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.89 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.89 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.88 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.88 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.88 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.88 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.88 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.88 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.88 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.87 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.87 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.87 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.87 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.87 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.87 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.86 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.86 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.86 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.86 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.86 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 99.77 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.86 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.86 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 99.86 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.86 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.86 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.85 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 99.85 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.85 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 99.85 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.85 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.85 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 99.85 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.84 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 99.84 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.84 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.83 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.83 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.83 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.82 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 99.82 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.81 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 99.8 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 99.8 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.8 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.79 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 99.79 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 99.78 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 99.77 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 99.74 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.74 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.74 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.74 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.73 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 99.72 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 99.71 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 99.7 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 99.69 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 99.69 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.69 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.66 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 99.65 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.65 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 99.64 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 99.63 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 99.61 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 99.6 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 99.59 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 99.57 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.55 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.53 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 99.51 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 99.51 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 99.46 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 99.43 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 99.43 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 99.42 | |
| 2px6_A | 316 | Thioesterase domain; thioesaterse domain, orlistat | 99.41 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 99.4 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 99.39 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 99.36 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 99.35 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 99.25 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 99.23 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 99.21 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 99.15 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 99.14 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 99.12 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 99.12 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 98.82 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 98.7 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 98.65 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 98.57 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 98.57 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 98.55 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 98.55 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 98.48 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 98.29 | |
| 2vsq_A | 1304 | Surfactin synthetase subunit 3; ligase, peptidyl c | 98.28 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 98.25 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 98.23 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 98.22 | |
| 1cpy_A | 421 | Serine carboxypeptidase; hydrolase (carboxypeptida | 98.13 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 97.98 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.65 | |
| 1tib_A | 269 | Lipase; hydrolase(carboxylic esterase); 1.84A {The | 97.63 | |
| 1tia_A | 279 | Lipase; hydrolase(carboxylic esterase); 2.10A {Pen | 97.49 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 97.45 | |
| 3hc7_A | 254 | Gene 12 protein, GP12; alpha/beta sandwich, cell a | 97.33 | |
| 1tgl_A | 269 | Triacyl-glycerol acylhydrolase; carboxylic esteras | 97.13 | |
| 4az3_A | 300 | Lysosomal protective protein 32 kDa chain; hydrola | 96.99 | |
| 1whs_B | 153 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 96.99 | |
| 4az3_B | 155 | Lysosomal protective protein 20 kDa chain; hydrola | 96.83 | |
| 3qpa_A | 197 | Cutinase; alpha-beta hydrolase fold, esterase, hyd | 96.65 | |
| 1lgy_A | 269 | Lipase, triacylglycerol lipase; hydrolase (carboxy | 96.65 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 96.6 | |
| 1uwc_A | 261 | Feruloyl esterase A; hydrolase, serine esterase, x | 96.55 | |
| 3g7n_A | 258 | Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A | 96.46 | |
| 3uue_A | 279 | LIP1, secretory lipase (family 3); LID-domain, hyd | 96.4 | |
| 3ngm_A | 319 | Extracellular lipase; secret lipase, hydrolase; 2. | 96.39 | |
| 1gxs_A | 270 | P-(S)-hydroxymandelonitrIle lyase chain A; inhibit | 96.3 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 96.29 | |
| 3dcn_A | 201 | Cutinase, cutin hydrolase; catalytic triad, secret | 96.25 | |
| 3o0d_A | 301 | YALI0A20350P, triacylglycerol lipase; alpha/beta-h | 96.23 | |
| 3aja_A | 302 | Putative uncharacterized protein; alpha-beta hydro | 96.15 | |
| 2czq_A | 205 | Cutinase-like protein; alpha/beta hydrolase fold, | 96.11 | |
| 3qpd_A | 187 | Cutinase 1; alpha-beta hydrolase fold, esterase, h | 96.06 | |
| 1gxs_B | 158 | P-(S)-hydroxymandelonitrIle lyase chain B; inhibit | 95.08 | |
| 1qoz_A | 207 | AXE, acetyl xylan esterase; hydrolase, xylan degra | 94.81 | |
| 1g66_A | 207 | Acetyl xylan esterase II; serine hydrolase, acetyl | 94.71 | |
| 2ory_A | 346 | Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Ph | 94.56 | |
| 1ac5_A | 483 | KEX1(delta)P; carboxypeptidase, hydrolase, glycopr | 93.55 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 92.98 | |
| 2yij_A | 419 | Phospholipase A1-iigamma; hydrolase; 2.00A {Arabid | 91.73 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 91.29 |
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-31 Score=201.08 Aligned_cols=210 Identities=29% Similarity=0.574 Sum_probs=161.5
Q ss_pred eEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCC--CceEEEccCCCCCCcccCCCCcccccccCCCCCCCC---CCc
Q 025121 24 THVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPL--PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDG---PED 98 (257)
Q Consensus 24 ~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~--~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~---~~~ 98 (257)
..+++|.++.+++|||+||+|++..+|..+++.+.. .++.+++|+.|.++.....+....+||+........ ..+
T Consensus 27 y~ii~P~~~~~~~VI~LHG~G~~~~dl~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~~~~~~~~~~~~~d 106 (246)
T 4f21_A 27 YELMEPAKQARFCVIWLHGLGADGHDFVDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDIKSLDANSLNRVVD 106 (246)
T ss_dssp EEEECCSSCCCEEEEEEEC--CCCCCGGGGGGGCCSCCTTEEEEEECGGGSCTTTHHHHHHHSCTTCCCC---CGGGGSC
T ss_pred ceEeCCCCcCCeEEEEEcCCCCCHHHHHHHHHHhhhcCCCeEEEeCCCCccccccCCCCCcccccccccccccchhhhhh
Confidence 445677778889999999999999999999988863 589999999886665555555567898875433221 112
Q ss_pred hhhHHHHHHHHHHHhc----cCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhh
Q 025121 99 WEGLDASAAHIANLLS----TEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN 174 (257)
Q Consensus 99 ~~~~~~~~~~~~~~~~----~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 174 (257)
.+.+...+..+..+++ ...+.++|+|+|+|+||.+++.++.+ ++..++++++++|+++....+..
T Consensus 107 ~~~i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~-----------~~~~~a~~i~~sG~lp~~~~~~~ 175 (246)
T 4f21_A 107 VEGINSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAIT-----------SQRKLGGIMALSTYLPAWDNFKG 175 (246)
T ss_dssp CC-CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTT-----------CSSCCCEEEEESCCCTTHHHHST
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHh-----------CccccccceehhhccCccccccc
Confidence 2334444444444432 23445699999999999999999985 48899999999999987665444
Q ss_pred ccccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 175 KIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 175 ~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
.... ...++|++++||+.|++||++.++++.+.|++.|. ++++.+++|.||.+.++.++.+.+||.+.|+
T Consensus 176 ~~~~------~~~~~Pvl~~HG~~D~vVp~~~~~~~~~~L~~~g~-~v~~~~y~g~gH~i~~~~l~~~~~fL~k~l~ 245 (246)
T 4f21_A 176 KITS------INKGLPILVCHGTDDQVLPEVLGHDLSDKLKVSGF-ANEYKHYVGMQHSVCMEEIKDISNFIAKTFK 245 (246)
T ss_dssp TCCG------GGTTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTC-CEEEEEESSCCSSCCHHHHHHHHHHHHHHTT
T ss_pred cccc------cccCCchhhcccCCCCccCHHHHHHHHHHHHHCCC-CeEEEEECCCCCccCHHHHHHHHHHHHHHhC
Confidence 3222 23578999999999999999999999999999988 8999999999999999999999999999886
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.7e-31 Score=198.86 Aligned_cols=190 Identities=19% Similarity=0.285 Sum_probs=147.9
Q ss_pred CCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH---
Q 025121 28 RPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA--- 104 (257)
Q Consensus 28 ~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~--- 104 (257)
.|.++.+++|||+||+|++..+|..+++.|...++.|++||.+++ +||+....... ..+...+.+
T Consensus 16 ~P~~~a~~~Vv~lHG~G~~~~~~~~l~~~l~~~~~~v~~P~~~g~-----------~w~~~~~~~~~-~~~~~~~~~~~~ 83 (210)
T 4h0c_A 16 VPVQRAKKAVVMLHGRGGTAADIISLQKVLKLDEMAIYAPQATNN-----------SWYPYSFMAPV-QQNQPALDSALA 83 (210)
T ss_dssp SCTTTCSEEEEEECCTTCCHHHHHGGGGTSSCTTEEEEEECCGGG-----------CSSSSCTTSCG-GGGTTHHHHHHH
T ss_pred CCcccCCcEEEEEeCCCCCHHHHHHHHHHhCCCCeEEEeecCCCC-----------CccccccCCCc-ccchHHHHHHHH
Confidence 455677899999999999999999999999889999999997743 56654332211 112223333
Q ss_pred HHHHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHH
Q 025121 105 SAAHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAA 183 (257)
Q Consensus 105 ~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 183 (257)
.+..+.+.+... .+.++|+|+|+|+||.+++.++.+. +.+++++++++++++...........
T Consensus 84 ~i~~~~~~~~~~~i~~~ri~l~G~S~Gg~~a~~~a~~~-----------p~~~~~vv~~sg~l~~~~~~~~~~~~----- 147 (210)
T 4h0c_A 84 LVGEVVAEIEAQGIPAEQIYFAGFSQGACLTLEYTTRN-----------ARKYGGIIAFTGGLIGQELAIGNYKG----- 147 (210)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHT-----------BSCCSEEEEETCCCCSSSCCGGGCCB-----
T ss_pred HHHHHHHHHHHhCCChhhEEEEEcCCCcchHHHHHHhC-----------cccCCEEEEecCCCCChhhhhhhhhh-----
Confidence 333443333333 3456999999999999999999864 88999999999988765443332211
Q ss_pred hhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHH
Q 025121 184 RRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLT 247 (257)
Q Consensus 184 ~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~ 247 (257)
....+|++++||++|++||++.++++++.|++.|. ++++++|||.||.+..+.++.+.+||.
T Consensus 148 -~~~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~~~g~-~v~~~~ypg~gH~i~~~el~~i~~wL~ 209 (210)
T 4h0c_A 148 -DFKQTPVFISTGNPDPHVPVSRVQESVTILEDMNA-AVSQVVYPGRPHTISGDEIQLVNNTIL 209 (210)
T ss_dssp -CCTTCEEEEEEEESCTTSCHHHHHHHHHHHHHTTC-EEEEEEEETCCSSCCHHHHHHHHHTTT
T ss_pred -hccCCceEEEecCCCCccCHHHHHHHHHHHHHCCC-CeEEEEECCCCCCcCHHHHHHHHHHHc
Confidence 23478999999999999999999999999999988 899999999999999999999999985
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.98 E-value=1.6e-30 Score=196.65 Aligned_cols=212 Identities=33% Similarity=0.590 Sum_probs=172.3
Q ss_pred EEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025121 25 HVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 25 ~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
++.++.+++.|+|||+||++++...|..+++.|+..||.|+++|.|+++.....+.....||+..+..........++.+
T Consensus 14 ~~~p~~~~~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~~~~~~~~~~~~~~ 93 (232)
T 1fj2_A 14 AIVPAARKATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQ 93 (232)
T ss_dssp EEECCSSCCSEEEEEECCSSSCHHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHH
T ss_pred cccCCCCCCCceEEEEecCCCccchHHHHHHHHhcCCcEEEecCCCccccccccccccccccccccCCcccccccHHHHH
Confidence 45566667889999999999999999999999988899999999999888877788888898876554444445566777
Q ss_pred HHHHHHHHhccC----CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccch
Q 025121 105 SAAHIANLLSTE----PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSH 180 (257)
Q Consensus 105 ~~~~~~~~~~~~----~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 180 (257)
.++++..+++.. .+.++++|+|||+||.+++.++.+ ++++++++++++++.+.........
T Consensus 94 ~~~~~~~~i~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~-----------~~~~v~~~i~~~~~~~~~~~~~~~~---- 158 (232)
T 1fj2_A 94 AAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALT-----------TQQKLAGVTALSCWLPLRASFPQGP---- 158 (232)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTT-----------CSSCCSEEEEESCCCTTGGGSCSSC----
T ss_pred HHHHHHHHHHHHhcCCCCcCCEEEEEECHHHHHHHHHHHh-----------CCCceeEEEEeecCCCCCccccccc----
Confidence 777776666552 233599999999999999999985 3788999999999887655432211
Q ss_pred HHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCc-eeeEEEEecCCCCccCHHHHHHHHHHHHHhcCc
Q 025121 181 EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGF-RHLTFKSFEGLGHYTVPKEMDEVCNWLTARLGL 252 (257)
Q Consensus 181 ~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~-~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 252 (257)
......++|+++++|++|.+++.+.++.+.+.+++.+. ++++++++++++|.+..+..+.+.+||.+.++.
T Consensus 159 -~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~H~~~~~~~~~i~~~l~~~l~~ 230 (232)
T 1fj2_A 159 -IGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEMMDVKQFIDKLLPP 230 (232)
T ss_dssp -CCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEETTCCSSCCHHHHHHHHHHHHHHSCC
T ss_pred -cccccCCCCEEEEecCCCccCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCcccCHHHHHHHHHHHHHhcCC
Confidence 11345689999999999999999999999999987654 158999999999999999999999999998864
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=198.06 Aligned_cols=215 Identities=28% Similarity=0.485 Sum_probs=172.5
Q ss_pred CceEEeCCCCCCceEEEEEccCCCCccchHHHhhcCC-----CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCC
Q 025121 22 GRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLP-----LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGP 96 (257)
Q Consensus 22 ~~~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~-----~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~ 96 (257)
...+++++.+++.|+|||+||++++...|..+++.|. ..++.|+++|.|.++.....+.....||+.........
T Consensus 11 ~~~~~~~~~~~~~p~vv~lHG~g~~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 90 (239)
T 3u0v_A 11 LQRCIVSPAGRHSASLIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCP 90 (239)
T ss_dssp CCEEEECCSSCCCEEEEEECCTTCCHHHHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSC
T ss_pred CCceecCCCCCCCcEEEEEecCCCchhhHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccc
Confidence 3456667777889999999999999999887776654 35899999999988777777777788988766555555
Q ss_pred CchhhHHHHHHHHHHHhcc---C-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhh
Q 025121 97 EDWEGLDASAAHIANLLST---E-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL 172 (257)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~---~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 172 (257)
.....+.+.++++..+++. . ...++++|+||||||.+++.++.+. +++++++++++++.+.....
T Consensus 91 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-----------~~~~~~~v~~~~~~~~~~~~ 159 (239)
T 3u0v_A 91 EHLESIDVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRN-----------HQDVAGVFALSSFLNKASAV 159 (239)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHH-----------CTTSSEEEEESCCCCTTCHH
T ss_pred cchhhHHHHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhC-----------ccccceEEEecCCCCchhHH
Confidence 6666777777777776654 1 2345999999999999999999864 78999999999988765543
Q ss_pred hhccccchHHHhhhcCCC-EEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 173 RNKIEGSHEAARRAASLP-ILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 173 ~~~~~~~~~~~~~~~~~P-~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
.... ......+| +++++|++|.++|.+.++.+.+.+++.+. ++++++++|++|.+..+..+.+.+||.+.+.
T Consensus 160 ~~~~------~~~~~~~pp~li~~G~~D~~v~~~~~~~~~~~l~~~~~-~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 232 (239)
T 3u0v_A 160 YQAL------QKSNGVLPELFQCHGTADELVLHSWAEETNSMLKSLGV-TTKFHSFPNVYHELSKTELDILKLWILTKLP 232 (239)
T ss_dssp HHHH------HHCCSCCCCEEEEEETTCSSSCHHHHHHHHHHHHHTTC-CEEEEEETTCCSSCCHHHHHHHHHHHHHHCC
T ss_pred HHHH------HhhccCCCCEEEEeeCCCCccCHHHHHHHHHHHHHcCC-cEEEEEeCCCCCcCCHHHHHHHHHHHHHhCC
Confidence 3221 12345667 99999999999999999999999998877 7899999999999999999999999999987
Q ss_pred cCC
Q 025121 252 LEG 254 (257)
Q Consensus 252 ~~~ 254 (257)
...
T Consensus 233 ~~~ 235 (239)
T 3u0v_A 233 GEM 235 (239)
T ss_dssp ---
T ss_pred Ccc
Confidence 543
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=195.51 Aligned_cols=208 Identities=30% Similarity=0.567 Sum_probs=165.0
Q ss_pred eEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCC--CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhh
Q 025121 24 THVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPL--PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEG 101 (257)
Q Consensus 24 ~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~--~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 101 (257)
.+++++.+++.|+||++||++++...|..+++.|++ .||.|+++|+|+++.....|.....||+..+...........
T Consensus 4 ~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~ 83 (218)
T 1auo_A 4 PLILQPAKPADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEE 83 (218)
T ss_dssp CEEECCSSCCSEEEEEECCTTCCTTTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHH
T ss_pred ceecCCCCCCCcEEEEEecCCCChhhHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCcccccchHH
Confidence 345566677889999999999999999999999987 899999999997766556677777888775444333344555
Q ss_pred HHHHHHHHHHHhcc----CCCCceEEEEEechhHHHHHHHHH-hccccCCCCCCCcccccceEEEeccCCCCchhhhhcc
Q 025121 102 LDASAAHIANLLST----EPADVKVGIGGFSMGAAVALYSAT-CCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI 176 (257)
Q Consensus 102 ~~~~~~~~~~~~~~----~~~~~~i~l~G~S~Gg~~a~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 176 (257)
+.+.++++..+++. ....++++++|||+||.+++.++. +. +++++++++++++.+. +.+...+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~-----------~~~~~~~v~~~~~~~~-~~~~~~~ 151 (218)
T 1auo_A 84 LEVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINW-----------QGPLGGVIALSTYAPT-FGDELEL 151 (218)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTC-----------CSCCCEEEEESCCCTT-CCTTCCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcC-----------CCCccEEEEECCCCCC-chhhhhh
Confidence 66666666655544 233459999999999999999998 64 7789999999998775 1111111
Q ss_pred ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 177 EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 177 ~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
.....++|+++++|++|.++|.+.++.+.+.++..+. ++++++++ ++|.+..+..+.+.+||.+.++
T Consensus 152 ------~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~g~-~~~~~~~~-~gH~~~~~~~~~~~~~l~~~l~ 218 (218)
T 1auo_A 152 ------SASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGV-TVTWQEYP-MGHEVLPQEIHDIGAWLAARLG 218 (218)
T ss_dssp ------CHHHHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTC-CEEEEEES-CSSSCCHHHHHHHHHHHHHHHC
T ss_pred ------hhcccCCCEEEEEeCCCceecHHHHHHHHHHHHhCCC-ceEEEEec-CCCccCHHHHHHHHHHHHHHhC
Confidence 1245689999999999999999999999999998766 78999999 9999999999999999998763
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.9e-30 Score=192.99 Aligned_cols=201 Identities=30% Similarity=0.564 Sum_probs=165.8
Q ss_pred CCCCCceEEEEEccCCCCccchHHHhhcCCC--CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025121 29 PKGKHQATIVWLHGLGDNGSSWSQLLESLPL--PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 29 ~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~--~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
..+++.|+||++||++++...|..+++.|++ .||.|+++|+|+++.....|+....|++..+...........+.+.+
T Consensus 19 ~~~~~~~~vv~lHG~~~~~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~~~~~ 98 (226)
T 3cn9_A 19 DAPNADACIIWLHGLGADRTDFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAIDEDQLNASA 98 (226)
T ss_dssp CCTTCCEEEEEECCTTCCGGGGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTCBCHHHHHHHH
T ss_pred cCCCCCCEEEEEecCCCChHHHHHHHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccccccchhHHHHH
Confidence 4456788999999999999999999999976 89999999999988887888888889887655444445566677777
Q ss_pred HHHHHHhccC----CCCceEEEEEechhHHHHHHHHH-hccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchH
Q 025121 107 AHIANLLSTE----PADVKVGIGGFSMGAAVALYSAT-CCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHE 181 (257)
Q Consensus 107 ~~~~~~~~~~----~~~~~i~l~G~S~Gg~~a~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 181 (257)
+++..+++.. ....+++|+|||+||.+++.++. +. +++++++++++++++....+ .
T Consensus 99 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~-----------~~~~~~~v~~~~~~~~~~~~--~------ 159 (226)
T 3cn9_A 99 DQVIALIDEQRAKGIAAERIILAGFSQGGAVVLHTAFRRY-----------AQPLGGVLALSTYAPTFDDL--A------ 159 (226)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHTC-----------SSCCSEEEEESCCCGGGGGC--C------
T ss_pred HHHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcC-----------ccCcceEEEecCcCCCchhh--h------
Confidence 7776666542 33359999999999999999998 65 77899999999988765443 1
Q ss_pred HHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 182 AARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 182 ~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
.....+++|+++++|++|.++|.+.++.+.+.++..+. ++++++++ ++|.+..+..+.+.+||.+.+
T Consensus 160 ~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~l~~~g~-~~~~~~~~-~gH~~~~~~~~~i~~~l~~~l 226 (226)
T 3cn9_A 160 LDERHKRIPVLHLHGSQDDVVDPALGRAAHDALQAQGV-EVGWHDYP-MGHEVSLEEIHDIGAWLRKRL 226 (226)
T ss_dssp CCTGGGGCCEEEEEETTCSSSCHHHHHHHHHHHHHTTC-CEEEEEES-CCSSCCHHHHHHHHHHHHHHC
T ss_pred hcccccCCCEEEEecCCCCccCHHHHHHHHHHHHHcCC-ceeEEEec-CCCCcchhhHHHHHHHHHhhC
Confidence 11245689999999999999999999999999998766 78999999 999999999999999998764
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-30 Score=199.46 Aligned_cols=202 Identities=28% Similarity=0.419 Sum_probs=150.4
Q ss_pred CCCCCceEEEEEccCCCCccchHHHhhcCCC--CceEEEccCCCCCCcccCCCCcccccccCCCCCCC-CCCchhhHHHH
Q 025121 29 PKGKHQATIVWLHGLGDNGSSWSQLLESLPL--PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDD-GPEDWEGLDAS 105 (257)
Q Consensus 29 ~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~--~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~-~~~~~~~~~~~ 105 (257)
..+++.|+|||+||+|++..+|..+++.|.. .++.+++|+.|........| .+||+....... .....+.+.+.
T Consensus 61 ~~~~~~plVI~LHG~G~~~~~~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G---~~Wfd~~~~~~~~~~~~~~~~~~~ 137 (285)
T 4fhz_A 61 APGEATSLVVFLHGYGADGADLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFG---FQWFPIPWLDGSSETAAAEGMAAA 137 (285)
T ss_dssp CTTCCSEEEEEECCTTBCHHHHHTTHHHHGGGSTTEEEEEECCSEECTTSSSC---EESSCCHHHHCCCHHHHHHHHHHH
T ss_pred CCCCCCcEEEEEcCCCCCHHHHHHHHHHHHHhCCCeEEEecCCCcccccCCCc---ccccccccccCcccchhhHHHHHH
Confidence 3456789999999999999988877766642 58999999977432222222 478875322111 11122333333
Q ss_pred HHHHHHHhc----c-CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccch
Q 025121 106 AAHIANLLS----T-EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSH 180 (257)
Q Consensus 106 ~~~~~~~~~----~-~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 180 (257)
...+..+++ + ..+.++|+|+|+|+||.+++.++.+. +..+++++.++|+++.......
T Consensus 138 ~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~-----------p~~~a~vv~~sG~l~~~~~~~~------ 200 (285)
T 4fhz_A 138 ARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRR-----------AEEIAGIVGFSGRLLAPERLAE------ 200 (285)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHS-----------SSCCSEEEEESCCCSCHHHHHH------
T ss_pred HHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhC-----------cccCceEEEeecCccCchhhhh------
Confidence 444444332 2 24456999999999999999999864 8899999999999876544332
Q ss_pred HHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcCcCC
Q 025121 181 EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLGLEG 254 (257)
Q Consensus 181 ~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~~~ 254 (257)
....++|++++||++|.+||++.++++.+.|++.|. ++++++|+|.||.+.++.++.+.+||++.|....
T Consensus 201 ---~~~~~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~~~g~-~~~~~~y~g~gH~i~~~~l~~~~~fL~~~Lpd~~ 270 (285)
T 4fhz_A 201 ---EARSKPPVLLVHGDADPVVPFADMSLAGEALAEAGF-TTYGHVMKGTGHGIAPDGLSVALAFLKERLPDAC 270 (285)
T ss_dssp ---HCCCCCCEEEEEETTCSSSCTHHHHHHHHHHHHTTC-CEEEEEETTCCSSCCHHHHHHHHHHHHHHCC---
T ss_pred ---hhhhcCcccceeeCCCCCcCHHHHHHHHHHHHHCCC-CEEEEEECCCCCCCCHHHHHHHHHHHHHHCcCCc
Confidence 234578999999999999999999999999999998 8999999999999999999999999999986543
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-28 Score=192.38 Aligned_cols=184 Identities=15% Similarity=0.111 Sum_probs=132.3
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.+.||++||++++...|..+++.|+++||+|+++|+||||.+...- ......++.+++..+.+.+
T Consensus 51 ~~~VlllHG~~~s~~~~~~la~~La~~Gy~Via~Dl~GhG~S~~~~---------------~~~~~~~~~~d~~~~~~~l 115 (281)
T 4fbl_A 51 RIGVLVSHGFTGSPQSMRFLAEGFARAGYTVATPRLTGHGTTPAEM---------------AASTASDWTADIVAAMRWL 115 (281)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCTTSSSCHHHH---------------HTCCHHHHHHHHHHHHHHH
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCccc---------------cCCCHHHHHHHHHHHHHHH
Confidence 4569999999999999999999999899999999999987543110 0011233333344444444
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhh-------------------
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN------------------- 174 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~------------------- 174 (257)
+.. .++++|+||||||.+++.++.+. |++++++|++++.+........
T Consensus 116 ~~~--~~~v~lvG~S~GG~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (281)
T 4fbl_A 116 EER--CDVLFMTGLSMGGALTVWAAGQF-----------PERFAGIMPINAALRMESPDLAALAFNPDAPAELPGIGSDI 182 (281)
T ss_dssp HHH--CSEEEEEEETHHHHHHHHHHHHS-----------TTTCSEEEEESCCSCCCCHHHHHHHTCTTCCSEEECCCCCC
T ss_pred HhC--CCeEEEEEECcchHHHHHHHHhC-----------chhhhhhhcccchhcccchhhHHHHHhHhhHHhhhcchhhh
Confidence 322 23899999999999999999964 8899999999875432110000
Q ss_pred ---cc-----c--------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCC
Q 025121 175 ---KI-----E--------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGH 232 (257)
Q Consensus 175 ---~~-----~--------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H 232 (257)
.. . .........+++|+|+++|++|.++|++.++.+++.++.. ++++++++++||
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~---~~~l~~~~~~gH 259 (281)
T 4fbl_A 183 KAEGVKELAYPVTPVPAIKHLITIGAVAEMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIGST---EKELLWLENSYH 259 (281)
T ss_dssp SSTTCCCCCCSEEEGGGHHHHHHHHHHHHHHGGGCCSCEEEEEESSCSSSCTHHHHHHHHHCCCS---SEEEEEESSCCS
T ss_pred hhHHHHHhhhccCchHHHHHHHHhhhhccccccccCCCEEEEEeCCCCCcCHHHHHHHHHhCCCC---CcEEEEECCCCC
Confidence 00 0 0011234567899999999999999999999999998754 679999999999
Q ss_pred ccCH-----HHHHHHHHHHHH
Q 025121 233 YTVP-----KEMDEVCNWLTA 248 (257)
Q Consensus 233 ~~~~-----~~~~~~~~~l~~ 248 (257)
.+.. +..+.+.+||++
T Consensus 260 ~~~~e~~~e~v~~~i~~FL~~ 280 (281)
T 4fbl_A 260 VATLDNDKELILERSLAFIRK 280 (281)
T ss_dssp CGGGSTTHHHHHHHHHHHHHT
T ss_pred cCccccCHHHHHHHHHHHHHh
Confidence 8652 245778888875
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=7.3e-27 Score=178.87 Aligned_cols=188 Identities=12% Similarity=0.087 Sum_probs=134.8
Q ss_pred CCceEEEEEccCCCC--ccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDN--GSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
.+.|+|||+||++++ ...|..+++.|++.||+|+++|+||+|.+.... .........+++..+
T Consensus 25 ~~~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~---------------~~~~~~~~~~d~~~~ 89 (251)
T 2wtm_A 25 EKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKSDGKF---------------EDHTLFKWLTNILAV 89 (251)
T ss_dssp SSEEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCG---------------GGCCHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCCCCCCCCCcc---------------ccCCHHHHHHHHHHH
Confidence 467899999999999 778999999998789999999999887543110 001133334445555
Q ss_pred HHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhh---------------hh
Q 025121 110 ANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL---------------RN 174 (257)
Q Consensus 110 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---------------~~ 174 (257)
.+.+.+....++++|+||||||.+++.++.+. |++++++|++++........ ..
T Consensus 90 ~~~l~~~~~~~~~~lvGhS~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (251)
T 2wtm_A 90 VDYAKKLDFVTDIYMAGHSQGGLSVMLAAAME-----------RDIIKALIPLSPAAMIPEIARTGELLGLKFDPENIPD 158 (251)
T ss_dssp HHHHTTCTTEEEEEEEEETHHHHHHHHHHHHT-----------TTTEEEEEEESCCTTHHHHHHHTEETTEECBTTBCCS
T ss_pred HHHHHcCcccceEEEEEECcchHHHHHHHHhC-----------cccceEEEEECcHHHhHHHHhhhhhccccCCchhcch
Confidence 56665433224999999999999999999854 88899999998754211100 00
Q ss_pred cc-----------------ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHH
Q 025121 175 KI-----------------EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPK 237 (257)
Q Consensus 175 ~~-----------------~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~ 237 (257)
.+ ..........+++|+|+++|++|.++|++.++.+.+.++ ++++++++++||.+ .+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~-----~~~~~~~~~~gH~~-~~ 232 (251)
T 2wtm_A 159 ELDAWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQYK-----NCKLVTIPGDTHCY-DH 232 (251)
T ss_dssp EEEETTTEEEETHHHHHHTTCCHHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHSS-----SEEEEEETTCCTTC-TT
T ss_pred HHhhhhccccchHHHHHHHccCHHHHHHhcCCCEEEEEeCCCCCcChHHHHHHHHhCC-----CcEEEEECCCCccc-ch
Confidence 00 001112345678999999999999999999999988875 67999999999998 54
Q ss_pred H----HHHHHHHHHHhcC
Q 025121 238 E----MDEVCNWLTARLG 251 (257)
Q Consensus 238 ~----~~~~~~~l~~~l~ 251 (257)
. .+.+.+||.+.+.
T Consensus 233 ~~~~~~~~i~~fl~~~~~ 250 (251)
T 2wtm_A 233 HLELVTEAVKEFMLEQIA 250 (251)
T ss_dssp THHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHhcc
Confidence 4 4667777766543
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-26 Score=179.63 Aligned_cols=200 Identities=18% Similarity=0.181 Sum_probs=142.0
Q ss_pred EeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025121 26 VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 26 ~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
.+.+.++++|+|||+||++++...|..+++.|+..||.|+++|+||+|.+..... .........++
T Consensus 34 ~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~--------------~~~~~~~~~~d 99 (303)
T 3pe6_A 34 YWAPTGTPKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERM--------------VVSDFHVFVRD 99 (303)
T ss_dssp EECCSSCCSEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCSSTT--------------CCSSTHHHHHH
T ss_pred EeccCCCCCeEEEEECCCCchhhHHHHHHHHHHhCCCcEEEeCCCCCCCCCCCCC--------------CCCCHHHHHHH
Confidence 3455566789999999999999999999999987899999999998765432110 01122233333
Q ss_pred HHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc---------
Q 025121 106 AAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI--------- 176 (257)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--------- 176 (257)
+..+.+.+.......+++|+|||+||.+++.++.+. +++++++++++++...........
T Consensus 100 ~~~~l~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 168 (303)
T 3pe6_A 100 VLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAER-----------PGHFAGMVLISPLVLANPESATTFKVLAAKVLN 168 (303)
T ss_dssp HHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHS-----------TTTCSEEEEESCSSSBCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccCCceEEEEEeCHHHHHHHHHHHhC-----------cccccEEEEECccccCchhccHHHHHHHHHHHH
Confidence 333333333333334999999999999999999954 888999999998754331110000
Q ss_pred ----------------c--------------------------------cchHHHhhhcCCCEEEEccCCCCcccchhhH
Q 025121 177 ----------------E--------------------------------GSHEAARRAASLPILLTHGLCDDVVPYKYGE 208 (257)
Q Consensus 177 ----------------~--------------------------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~ 208 (257)
. .........+++|+++++|++|.+++.+.++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~ 248 (303)
T 3pe6_A 169 SVLPNLSSGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAY 248 (303)
T ss_dssp TTCCSCCCCCCCGGGTCSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSBCHHHHH
T ss_pred HhcccccCCccchhhhhcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHHhhcCCCCEEEEeeCCCCCCChHHHH
Confidence 0 0001234567999999999999999999999
Q ss_pred HHHHHhhhcCceeeEEEEecCCCCccCH-------HHHHHHHHHHHHhcCcC
Q 025121 209 KSANCLSISGFRHLTFKSFEGLGHYTVP-------KEMDEVCNWLTARLGLE 253 (257)
Q Consensus 209 ~~~~~l~~~~~~~~~~~~~~g~~H~~~~-------~~~~~~~~~l~~~l~~~ 253 (257)
.+.+.++.. ++++++++++||.+.. +.++.+.+||.+.+...
T Consensus 249 ~~~~~~~~~---~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~~~~~ 297 (303)
T 3pe6_A 249 LLMELAKSQ---DKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTATA 297 (303)
T ss_dssp HHHHHCCCS---SEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHTTC--
T ss_pred HHHHhcccC---CceEEEeCCCccceeccchHHHHHHHHHHHHHHhccCCCC
Confidence 999998743 5799999999998863 34567888888877644
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.4e-26 Score=182.61 Aligned_cols=199 Identities=18% Similarity=0.185 Sum_probs=143.2
Q ss_pred EeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025121 26 VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 26 ~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
.+.+.++++|+|||+||++++...|..+++.|+..||.|+++|+||+|.+..... .........++
T Consensus 52 ~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~--------------~~~~~~~~~~d 117 (342)
T 3hju_A 52 YWKPTGTPKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERM--------------VVSDFHVFVRD 117 (342)
T ss_dssp EECCSSCCSEEEEEECCTTCCGGGGHHHHHHHHTTTEEEEEECCTTSTTSCSSTT--------------CCSCTHHHHHH
T ss_pred EeCCCCCCCcEEEEECCCCcccchHHHHHHHHHhCCCeEEEEcCCCCcCCCCcCC--------------CcCcHHHHHHH
Confidence 3345567789999999999999999999999988899999999998765432110 11123333333
Q ss_pred HHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc---------
Q 025121 106 AAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI--------- 176 (257)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--------- 176 (257)
+..+.+.+.......+++|+|||+||.+++.++.+. +++++++|+++++...........
T Consensus 118 ~~~~l~~l~~~~~~~~v~l~G~S~Gg~~a~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 186 (342)
T 3hju_A 118 VLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAER-----------PGHFAGMVLISPLVLANPESATTFKVLAAKVLN 186 (342)
T ss_dssp HHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHS-----------TTTCSEEEEESCCCSCCTTTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhC-----------ccccceEEEECcccccchhhhhHHHHHHHHHHH
Confidence 333334443333345999999999999999999964 789999999998754321110000
Q ss_pred ----------------cc--------------------------------chHHHhhhcCCCEEEEccCCCCcccchhhH
Q 025121 177 ----------------EG--------------------------------SHEAARRAASLPILLTHGLCDDVVPYKYGE 208 (257)
Q Consensus 177 ----------------~~--------------------------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~ 208 (257)
.. ........+++|+|+++|++|.+++.+.++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~ 266 (342)
T 3hju_A 187 LVLPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAY 266 (342)
T ss_dssp HHCTTCBCCCCCGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSSCHHHHH
T ss_pred HhccccccCcccccccccchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHHhCCcCEEEEEeCCCcccChHHHH
Confidence 00 001234567899999999999999999999
Q ss_pred HHHHHhhhcCceeeEEEEecCCCCccCH-------HHHHHHHHHHHHhcCc
Q 025121 209 KSANCLSISGFRHLTFKSFEGLGHYTVP-------KEMDEVCNWLTARLGL 252 (257)
Q Consensus 209 ~~~~~l~~~~~~~~~~~~~~g~~H~~~~-------~~~~~~~~~l~~~l~~ 252 (257)
.+.+.++.. ++++++++++||.+.. +.++.+.+||.+.+..
T Consensus 267 ~~~~~~~~~---~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~~~~ 314 (342)
T 3hju_A 267 LLMELAKSQ---DKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTAT 314 (342)
T ss_dssp HHHHHCCCS---SEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCC---CceEEEECCCCchhhcCChHHHHHHHHHHHHHHhcccCC
Confidence 999998753 5799999999999773 3456788899887654
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-26 Score=175.70 Aligned_cols=187 Identities=14% Similarity=0.056 Sum_probs=135.3
Q ss_pred CCceEEEEEccCCCC-ccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDN-GSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~-~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
+..++|||+||++++ ...|..+++.|.+.||+|+++|+||+|.+..... ......+.+.++++.
T Consensus 21 ~~~~~vvllHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~---------------~~~~~~~~~~~~~~~ 85 (254)
T 2ocg_A 21 EGDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDR---------------DFPADFFERDAKDAV 85 (254)
T ss_dssp CCSEEEEEECCTTCCHHHHCHHHHHHSCTTTEEEEEECCTTSTTCCSSCC---------------CCCTTHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCCCccchHHHHHHHhhCCCeEEEECCCCCCCCCCCCC---------------CCChHHHHHHHHHHH
Confidence 345689999999888 6679999999988889999999998876532110 011122455666777
Q ss_pred HHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh----------hhh------
Q 025121 111 NLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN----------LRN------ 174 (257)
Q Consensus 111 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----------~~~------ 174 (257)
++++..... +++|+||||||.+++.++.+. |++++++|++++....... ...
T Consensus 86 ~~l~~l~~~-~~~l~GhS~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (254)
T 2ocg_A 86 DLMKALKFK-KVSLLGWSDGGITALIAAAKY-----------PSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTR 153 (254)
T ss_dssp HHHHHTTCS-SEEEEEETHHHHHHHHHHHHC-----------TTTEEEEEEESCCSBCCHHHHHHHHTTSCGGGSCHHHH
T ss_pred HHHHHhCCC-CEEEEEECHhHHHHHHHHHHC-----------hHHhhheeEeccccccChhhHHHHHHHHHHHHHHHHhH
Confidence 777665443 899999999999999999964 8899999998764321100 000
Q ss_pred -------------------------ccc----cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEE
Q 025121 175 -------------------------KIE----GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFK 225 (257)
Q Consensus 175 -------------------------~~~----~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~ 225 (257)
... .........+++|+++++|++|.++|.+.++.+.+.++ +.+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-----~~~~~ 228 (254)
T 2ocg_A 154 KPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVK-----GSRLH 228 (254)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHST-----TCEEE
T ss_pred HHHHHHhcchhhHHHHHHHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCCHHHHHHHHHhCC-----CCEEE
Confidence 000 00011234678999999999999999999888888886 56899
Q ss_pred EecCCCCccCHHHHHHHHHHHHHhc
Q 025121 226 SFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 226 ~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
+++++||....+..+.+.+.+.+++
T Consensus 229 ~~~~~gH~~~~e~p~~~~~~i~~fl 253 (254)
T 2ocg_A 229 LMPEGKHNLHLRFADEFNKLAEDFL 253 (254)
T ss_dssp EETTCCTTHHHHTHHHHHHHHHHHH
T ss_pred EcCCCCCchhhhCHHHHHHHHHHHh
Confidence 9999999988776666666666554
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-26 Score=177.73 Aligned_cols=183 Identities=17% Similarity=0.197 Sum_probs=135.3
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
...|+|||+||++++...|..+++.|+ .+|+|+++|+||+|.+.... ....++.+.++++..
T Consensus 13 ~~~~~vvllHG~~~~~~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~-----------------~~~~~~~~~a~dl~~ 74 (268)
T 3v48_A 13 ADAPVVVLISGLGGSGSYWLPQLAVLE-QEYQVVCYDQRGTGNNPDTL-----------------AEDYSIAQMAAELHQ 74 (268)
T ss_dssp TTCCEEEEECCTTCCGGGGHHHHHHHH-TTSEEEECCCTTBTTBCCCC-----------------CTTCCHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCccHHHHHHHHHHHh-hcCeEEEECCCCCCCCCCCc-----------------cccCCHHHHHHHHHH
Confidence 456899999999999999999999997 57999999999887543210 112345666777777
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh------------------
Q 025121 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR------------------ 173 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------------------ 173 (257)
+++..... +++|+||||||.+++.++.+. |+++.++++++++........
T Consensus 75 ~l~~l~~~-~~~lvGhS~GG~ia~~~A~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (268)
T 3v48_A 75 ALVAAGIE-HYAVVGHALGALVGMQLALDY-----------PASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAW 142 (268)
T ss_dssp HHHHTTCC-SEEEEEETHHHHHHHHHHHHC-----------TTTEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCC-CeEEEEecHHHHHHHHHHHhC-----------hhhceEEEEeccccccchhhhHHHHHHHHHHhccchhhh
Confidence 77765544 899999999999999999964 899999999987643211000
Q ss_pred -----------hcccc--------------------------------chHHHhhhcCCCEEEEccCCCCcccchhhHHH
Q 025121 174 -----------NKIEG--------------------------------SHEAARRAASLPILLTHGLCDDVVPYKYGEKS 210 (257)
Q Consensus 174 -----------~~~~~--------------------------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~ 210 (257)
..... ........+++|+++++|++|.++|.+.++.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~l 222 (268)
T 3v48_A 143 VEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSEL 222 (268)
T ss_dssp HHHHHHHHSCHHHHHTTHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGGGCCSCEEEEEETTCSSSCTHHHHHH
T ss_pred hhhhhhhcCchhhhhcccccchhhHHHHHhhcCchhHHHHHHHHHhccchhhhhhcCCCCeEEEEeCCCcccCHHHHHHH
Confidence 00000 00012345789999999999999999999999
Q ss_pred HHHhhhcCceeeEEEEecCCCCccCHHHH----HHHHHHHHHh
Q 025121 211 ANCLSISGFRHLTFKSFEGLGHYTVPKEM----DEVCNWLTAR 249 (257)
Q Consensus 211 ~~~l~~~~~~~~~~~~~~g~~H~~~~~~~----~~~~~~l~~~ 249 (257)
.+.++ +.++++++++||..+.+.. +.+.+||.+.
T Consensus 223 ~~~~p-----~~~~~~~~~~GH~~~~e~p~~~~~~i~~fl~~~ 260 (268)
T 3v48_A 223 HAALP-----DSQKMVMPYGGHACNVTDPETFNALLLNGLASL 260 (268)
T ss_dssp HHHCS-----SEEEEEESSCCTTHHHHCHHHHHHHHHHHHHHH
T ss_pred HHhCC-----cCeEEEeCCCCcchhhcCHHHHHHHHHHHHHHh
Confidence 99887 6789999999999885554 4455565543
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-26 Score=172.20 Aligned_cols=192 Identities=20% Similarity=0.219 Sum_probs=145.3
Q ss_pred eCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCC--CCCCchhhHHH
Q 025121 27 VRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSD--DGPEDWEGLDA 104 (257)
Q Consensus 27 ~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~--~~~~~~~~~~~ 104 (257)
.++.+++.| ||++||++++...|..+++.|. .++.|+++|.|.... +...||+..+... ........+..
T Consensus 10 ~~~~~~~~p-vv~lHG~g~~~~~~~~~~~~l~-~~~~v~~~~~~~~~~------g~~~~~~~~g~g~~~~~~~~~~~~~~ 81 (209)
T 3og9_A 10 KAGRKDLAP-LLLLHSTGGDEHQLVEIAEMIA-PSHPILSIRGRINEQ------GVNRYFKLRGLGGFTKENFDLESLDE 81 (209)
T ss_dssp ECCCTTSCC-EEEECCTTCCTTTTHHHHHHHS-TTCCEEEECCSBCGG------GCCBSSCBCSCTTCSGGGBCHHHHHH
T ss_pred eCCCCCCCC-EEEEeCCCCCHHHHHHHHHhcC-CCceEEEecCCcCCC------CcccceecccccccccCCCCHHHHHH
Confidence 344445677 9999999999999999999998 899999999874321 2346665322111 11223444555
Q ss_pred HHHHHHHHhc----cC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccc
Q 025121 105 SAAHIANLLS----TE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGS 179 (257)
Q Consensus 105 ~~~~~~~~~~----~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 179 (257)
.+..+.++++ .. .+.++++|+||||||.+++.++.+ ++++++++++++++++......
T Consensus 82 ~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~-----------~~~~~~~~v~~~~~~~~~~~~~------ 144 (209)
T 3og9_A 82 ETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLR-----------GKINFDKIIAFHGMQLEDFEQT------ 144 (209)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHT-----------TSCCCSEEEEESCCCCCCCCCC------
T ss_pred HHHHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHh-----------CCcccceEEEECCCCCCccccc------
Confidence 5555544443 22 233599999999999999999985 4889999999999876543221
Q ss_pred hHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHh
Q 025121 180 HEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTAR 249 (257)
Q Consensus 180 ~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 249 (257)
.....+|+++++|++|.++|.+.++++.+.+++.+. ++++.+++ ++|.+..+..+.+.+||.+.
T Consensus 145 ----~~~~~~p~li~~G~~D~~v~~~~~~~~~~~l~~~~~-~~~~~~~~-~gH~~~~~~~~~~~~~l~~~ 208 (209)
T 3og9_A 145 ----VQLDDKHVFLSYAPNDMIVPQKNFGDLKGDLEDSGC-QLEIYESS-LGHQLTQEEVLAAKKWLTET 208 (209)
T ss_dssp ----CCCTTCEEEEEECTTCSSSCHHHHHHHHHHHHHTTC-EEEEEECS-STTSCCHHHHHHHHHHHHHH
T ss_pred ----ccccCCCEEEEcCCCCCccCHHHHHHHHHHHHHcCC-ceEEEEcC-CCCcCCHHHHHHHHHHHHhh
Confidence 134578999999999999999999999999999887 78999998 69999999999999999863
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-26 Score=173.98 Aligned_cols=190 Identities=15% Similarity=0.117 Sum_probs=142.2
Q ss_pred CCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025121 28 RPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 28 ~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
++..+++|+|||+||++++...|..+++.|+. ++.|+++|.|++.. + ...|++..... ......+.+.++
T Consensus 24 ~~~~~~~p~vv~lHG~g~~~~~~~~~~~~l~~-~~~vv~~d~~~~~~----~--g~~~~~~~~~~---~~~~~~~~~~~~ 93 (223)
T 3b5e_A 24 GAGKESRECLFLLHGSGVDETTLVPLARRIAP-TATLVAARGRIPQE----D--GFRWFERIDPT---RFEQKSILAETA 93 (223)
T ss_dssp STTSSCCCEEEEECCTTBCTTTTHHHHHHHCT-TSEEEEECCSEEET----T--EEESSCEEETT---EECHHHHHHHHH
T ss_pred CCCCCCCCEEEEEecCCCCHHHHHHHHHhcCC-CceEEEeCCCCCcC----C--ccccccccCCC---cccHHHHHHHHH
Confidence 34444568999999999999999999999974 99999999875321 1 23454432111 122344444444
Q ss_pred HHHHHhcc-----CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHH
Q 025121 108 HIANLLST-----EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEA 182 (257)
Q Consensus 108 ~~~~~~~~-----~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 182 (257)
++.++++. ....++++|+|||+||.+++.++.+. +++++++++++++++.....
T Consensus 94 ~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----------~~~~~~~v~~~~~~~~~~~~---------- 152 (223)
T 3b5e_A 94 AFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLH-----------PGIVRLAALLRPMPVLDHVP---------- 152 (223)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHS-----------TTSCSEEEEESCCCCCSSCC----------
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhC-----------ccccceEEEecCccCccccc----------
Confidence 44444432 22345999999999999999999854 78899999999987653210
Q ss_pred HhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 183 ARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 183 ~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
.....++|+++++|++|.++|.+.++ +.+.+++.+. ++++++++ ++|.+..+..+.+.+||.+.+.
T Consensus 153 ~~~~~~~P~li~~G~~D~~v~~~~~~-~~~~l~~~g~-~~~~~~~~-~gH~~~~~~~~~i~~~l~~~~~ 218 (223)
T 3b5e_A 153 ATDLAGIRTLIIAGAADETYGPFVPA-LVTLLSRHGA-EVDARIIP-SGHDIGDPDAAIVRQWLAGPIA 218 (223)
T ss_dssp CCCCTTCEEEEEEETTCTTTGGGHHH-HHHHHHHTTC-EEEEEEES-CCSCCCHHHHHHHHHHHHCC--
T ss_pred cccccCCCEEEEeCCCCCcCCHHHHH-HHHHHHHCCC-ceEEEEec-CCCCcCHHHHHHHHHHHHhhhh
Confidence 12345789999999999999999999 9999998877 78999999 8999999999999999988665
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.95 E-value=7.5e-26 Score=171.19 Aligned_cols=209 Identities=19% Similarity=0.117 Sum_probs=141.5
Q ss_pred EeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCccc-ccccCCCCCCCCCCchhhHHH
Q 025121 26 VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCT-AWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 26 ~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~-~w~~~~~~~~~~~~~~~~~~~ 104 (257)
++.+.+ +.|+||++||++++...|..+++.|++.||.|+++|+|++|.+........ ..+.. ..........+
T Consensus 17 ~~~~~~-~~~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~~~~-----~~~~~~~~~~~ 90 (238)
T 1ufo_A 17 ARIPEA-PKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVE-----EVYRVALGFKE 90 (238)
T ss_dssp EEEESS-CCEEEEEECCTTCCHHHHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTTHHH-----HHHHHHHHHHH
T ss_pred EEecCC-CccEEEEECCCcccchHHHHHHHHHHhCCCEEEEecCCCCccCCCCCCcccccchhh-----hHHHHHHHHHH
Confidence 344444 788999999999999999999999988899999999998764432110000 00000 00000122233
Q ss_pred HHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch--hh-------hhc
Q 025121 105 SAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR--NL-------RNK 175 (257)
Q Consensus 105 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~-------~~~ 175 (257)
++..+.+.+.+... .+++++|||+||.+++.++.+. +..+++++++++...... .. ...
T Consensus 91 d~~~~~~~l~~~~~-~~i~l~G~S~Gg~~a~~~a~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (238)
T 1ufo_A 91 EARRVAEEAERRFG-LPLFLAGGSLGAFVAHLLLAEG-----------FRPRGVLAFIGSGFPMKLPQGQVVEDPGVLAL 158 (238)
T ss_dssp HHHHHHHHHHHHHC-CCEEEEEETHHHHHHHHHHHTT-----------CCCSCEEEESCCSSCCCCCTTCCCCCHHHHHH
T ss_pred HHHHHHHHHHhccC-CcEEEEEEChHHHHHHHHHHhc-----------cCcceEEEEecCCccchhhhhhccCCcccchh
Confidence 33333344332222 4999999999999999999853 777888887765432211 00 000
Q ss_pred cccchHHHhhhc-CCCEEEEccCCCCcccchhhHHHHHHhh-hcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcCc
Q 025121 176 IEGSHEAARRAA-SLPILLTHGLCDDVVPYKYGEKSANCLS-ISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLGL 252 (257)
Q Consensus 176 ~~~~~~~~~~~~-~~P~l~~~G~~D~~v~~~~~~~~~~~l~-~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 252 (257)
............ ++|+++++|++|.++|.+.++.+.+.++ ..+.++++++++++++|.+..+..+.+.+||.++++.
T Consensus 159 ~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~l~~~l~~ 237 (238)
T 1ufo_A 159 YQAPPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWLEA 237 (238)
T ss_dssp HHSCGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHHHHC
T ss_pred hcCChhhhhhhccCCcEEEEECCCCCccCcHHHHHHHHHHhhcCCCCceEEEEeCCCCcccHHHHHHHHHHHHHHHHhc
Confidence 000111223345 8999999999999999999999999998 6543257899999999999999999999999998754
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=7.2e-26 Score=174.72 Aligned_cols=194 Identities=20% Similarity=0.089 Sum_probs=137.6
Q ss_pred CCCCCCceEEEEEccCCCC--ccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025121 28 RPKGKHQATIVWLHGLGDN--GSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 28 ~~~~~~~~~vi~~HG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
.+.+++.|+|||+||++++ ...|..+++.|+..||.|+++|+||+|.+.... .........++
T Consensus 40 ~p~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~---------------~~~~~~~~~~d 104 (270)
T 3pfb_A 40 EPFGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGKF---------------ENMTVLNEIED 104 (270)
T ss_dssp ECSSSSEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCG---------------GGCCHHHHHHH
T ss_pred cCCCCCCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccccccCCCCCC---------------CccCHHHHHHh
Confidence 4455668999999999988 455888999998889999999999876443210 01123333444
Q ss_pred HHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhh-----------
Q 025121 106 AAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN----------- 174 (257)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----------- 174 (257)
+..+.+.+......++++|+|||+||.+++.++.+. ++++++++++++..........
T Consensus 105 ~~~~i~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----------p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (270)
T 3pfb_A 105 ANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLY-----------PDLIKKVVLLAPAATLKGDALEGNTQGVTYNPD 173 (270)
T ss_dssp HHHHHHHHHTCTTEEEEEEEEETHHHHHHHHHHHHC-----------TTTEEEEEEESCCTHHHHHHHHTEETTEECCTT
T ss_pred HHHHHHHHHhCcCCCeEEEEEeCchhHHHHHHHHhC-----------chhhcEEEEeccccccchhhhhhhhhccccCcc
Confidence 444445544433335999999999999999999954 7889999999886432210000
Q ss_pred ----c----------------cccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCcc
Q 025121 175 ----K----------------IEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYT 234 (257)
Q Consensus 175 ----~----------------~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~ 234 (257)
. ...........+++|+++++|++|.++|.+.++.+.+.++ ++++++++++||.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~ 248 (270)
T 3pfb_A 174 HIPDRLPFKDLTLGGFYLRIAQQLPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIYQ-----NSTLHLIEGADHCF 248 (270)
T ss_dssp SCCSEEEETTEEEEHHHHHHHHHCCHHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHCS-----SEEEEEETTCCTTC
T ss_pred cccccccccccccchhHhhcccccCHHHHHhhCCccEEEEEcCCCCCCCHHHHHHHHHhCC-----CCeEEEcCCCCccc
Confidence 0 0011123445678999999999999999999999888876 67999999999999
Q ss_pred CHHHHHHHHHHHHHhcCc
Q 025121 235 VPKEMDEVCNWLTARLGL 252 (257)
Q Consensus 235 ~~~~~~~~~~~l~~~l~~ 252 (257)
..+..+.+.+.+.+++..
T Consensus 249 ~~~~~~~~~~~i~~fl~~ 266 (270)
T 3pfb_A 249 SDSYQKNAVNLTTDFLQN 266 (270)
T ss_dssp CTHHHHHHHHHHHHHHC-
T ss_pred CccchHHHHHHHHHHHhh
Confidence 866666666666665543
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=99.94 E-value=9.4e-26 Score=174.38 Aligned_cols=184 Identities=18% Similarity=0.158 Sum_probs=126.8
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.++|||+||++++...|..+++.|...||+|+++|+||+|.+..+. ...++.+.++++..++
T Consensus 19 g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~------------------~~~~~~~~a~d~~~~l 80 (271)
T 3ia2_A 19 GKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPW------------------TGNDYDTFADDIAQLI 80 (271)
T ss_dssp SSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTSCCCS------------------SCCSHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCcHHHHHHHHHHHHhCCceEEEecCCCCccCCCCC------------------CCCCHHHHHHHHHHHH
Confidence 3579999999999999999999998789999999999887543211 1123344555555555
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh------------h---hh----
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN------------L---RN---- 174 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------------~---~~---- 174 (257)
+..... +++|+||||||.+++.++.+. .++++++++++++..+.... + ..
T Consensus 81 ~~l~~~-~~~lvGhS~GG~~~~~~~a~~----------~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (271)
T 3ia2_A 81 EHLDLK-EVTLVGFSMGGGDVARYIARH----------GSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARFKTELLK 149 (271)
T ss_dssp HHHTCC-SEEEEEETTHHHHHHHHHHHH----------CSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHH
T ss_pred HHhCCC-CceEEEEcccHHHHHHHHHHh----------CCcccceEEEEccCCccccCCCCCcccccHHHHHHHHHHHHh
Confidence 544333 899999999999777766642 37789999988764331100 0 00
Q ss_pred ------------cccc------------------------------------chHHHhhhcCCCEEEEccCCCCcccchh
Q 025121 175 ------------KIEG------------------------------------SHEAARRAASLPILLTHGLCDDVVPYKY 206 (257)
Q Consensus 175 ------------~~~~------------------------------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~ 206 (257)
.... ........+++|+|+++|++|.++|++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~~~p~~~ 229 (271)
T 3ia2_A 150 DRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQIVPFET 229 (271)
T ss_dssp HHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCBCHHHHTTCCSCEEEEEETTCSSSCGGG
T ss_pred hHHHHHHHhhHhhhccccccccCHHHHHHHHhhhhhccHHHHHHHHHHhhccCCcccccCCCCCEEEEEeCCCCcCChHH
Confidence 0000 0001134578999999999999999988
Q ss_pred hHHHH-HHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 207 GEKSA-NCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 207 ~~~~~-~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
..++. +.++ +.++++++++||.+..+..+.+.+-+.+++.
T Consensus 230 ~~~~~~~~~~-----~~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl~ 270 (271)
T 3ia2_A 230 TGKVAAELIK-----GAELKVYKDAPHGFAVTHAQQLNEDLLAFLK 270 (271)
T ss_dssp THHHHHHHST-----TCEEEEETTCCTTHHHHTHHHHHHHHHHHHT
T ss_pred HHHHHHHhCC-----CceEEEEcCCCCcccccCHHHHHHHHHHHhh
Confidence 55544 4444 6799999999999987766666666655553
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=6.6e-26 Score=175.09 Aligned_cols=182 Identities=15% Similarity=0.115 Sum_probs=135.3
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
..|+|||+||++.+...|..++..|+ .+|+|+++|+||||.+.... ...++.+.++++..+
T Consensus 26 ~~p~lvl~hG~~~~~~~w~~~~~~L~-~~~~vi~~D~rG~G~S~~~~------------------~~~~~~~~a~dl~~~ 86 (266)
T 3om8_A 26 EKPLLALSNSIGTTLHMWDAQLPALT-RHFRVLRYDARGHGASSVPP------------------GPYTLARLGEDVLEL 86 (266)
T ss_dssp TSCEEEEECCTTCCGGGGGGGHHHHH-TTCEEEEECCTTSTTSCCCC------------------SCCCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCccCHHHHHHHHHHhh-cCcEEEEEcCCCCCCCCCCC------------------CCCCHHHHHHHHHHH
Confidence 46899999999999999999999997 58999999999887543211 123456667777777
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCC--Cchhhh-----------------
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP--GSRNLR----------------- 173 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~----------------- 173 (257)
++..... +++|+||||||.+++.++.++ |++++++|++++... ....+.
T Consensus 87 l~~l~~~-~~~lvGhS~Gg~va~~~A~~~-----------P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (266)
T 3om8_A 87 LDALEVR-RAHFLGLSLGGIVGQWLALHA-----------PQRIERLVLANTSAWLGPAAQWDERIAAVLQAEDMSETAA 154 (266)
T ss_dssp HHHTTCS-CEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESCCSBCCCSHHHHHHHHHHHHCSSSHHHHH
T ss_pred HHHhCCC-ceEEEEEChHHHHHHHHHHhC-----------hHhhheeeEecCcccCCchhHHHHHHHHHHccccHHHHHH
Confidence 7766544 899999999999999999964 999999999865321 100000
Q ss_pred ----hccc-----cc------------------------------hHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHh
Q 025121 174 ----NKIE-----GS------------------------------HEAARRAASLPILLTHGLCDDVVPYKYGEKSANCL 214 (257)
Q Consensus 174 ----~~~~-----~~------------------------------~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l 214 (257)
..+. .. .......+++|+|+++|++|.++|.+.++.+.+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~~l~~~i 234 (266)
T 3om8_A 155 GFLGNWFPPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAASHGELIAASI 234 (266)
T ss_dssp HHHHHHSCHHHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGGCCSCEEEEEETTCSSSCHHHHHHHHHHS
T ss_pred HHHHHhcChhhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcCCCCCEEEEEeCCCCCCCHHHHHHHHHhC
Confidence 0000 00 00123567899999999999999999999999998
Q ss_pred hhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 215 SISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 215 ~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
+ +.++++++ +||..+.|..+.+.+.|.+++.
T Consensus 235 p-----~a~~~~i~-~gH~~~~e~p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 235 A-----GARLVTLP-AVHLSNVEFPQAFEGAVLSFLG 265 (266)
T ss_dssp T-----TCEEEEES-CCSCHHHHCHHHHHHHHHHHHT
T ss_pred C-----CCEEEEeC-CCCCccccCHHHHHHHHHHHhc
Confidence 7 66889998 6999987777776666666553
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=5.6e-26 Score=176.76 Aligned_cols=192 Identities=18% Similarity=0.172 Sum_probs=133.9
Q ss_pred EEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025121 25 HVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 25 ~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
+.|...++ .++|||+||++++...|..++..|.+.||+|+++|+||+|.+.... ...++.+
T Consensus 19 l~y~~~G~-g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~------------------~~~~~~~ 79 (281)
T 3fob_A 19 IYYEDHGT-GKPVVLIHGWPLSGRSWEYQVPALVEAGYRVITYDRRGFGKSSQPW------------------EGYEYDT 79 (281)
T ss_dssp EEEEEESS-SEEEEEECCTTCCGGGGTTTHHHHHHTTEEEEEECCTTSTTSCCCS------------------SCCSHHH
T ss_pred EEEEECCC-CCeEEEECCCCCcHHHHHHHHHHHHhCCCEEEEeCCCCCCCCCCCc------------------cccCHHH
Confidence 44444443 4679999999999999999988887789999999999887543211 1223455
Q ss_pred HHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc-------h-----h-
Q 025121 105 SAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS-------R-----N- 171 (257)
Q Consensus 105 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~-----~- 171 (257)
.++++.++++..... +++|+||||||.+++.++.+. .|+++++++++++..+.. . .
T Consensus 80 ~a~dl~~ll~~l~~~-~~~lvGhS~GG~i~~~~~a~~----------~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 148 (281)
T 3fob_A 80 FTSDLHQLLEQLELQ-NVTLVGFSMGGGEVARYISTY----------GTDRIEKVVFAGAVPPYLYKSEDHPEGALDDAT 148 (281)
T ss_dssp HHHHHHHHHHHTTCC-SEEEEEETTHHHHHHHHHHHH----------CSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHH
T ss_pred HHHHHHHHHHHcCCC-cEEEEEECccHHHHHHHHHHc----------cccceeEEEEecCCCcchhccccccccccchhH
Confidence 566666666665444 899999999999888776642 278899998887542210 0 0
Q ss_pred ---hh----------------hccc------c-------------------------------chHHHhhhcCCCEEEEc
Q 025121 172 ---LR----------------NKIE------G-------------------------------SHEAARRAASLPILLTH 195 (257)
Q Consensus 172 ---~~----------------~~~~------~-------------------------------~~~~~~~~~~~P~l~~~ 195 (257)
+. ..+. . ........+++|+|+++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~ 228 (281)
T 3fob_A 149 IETFKSGVINDRLAFLDEFTKGFFAAGDRTDLVSESFRLYNWDIAAGASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIH 228 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCSSCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEE
T ss_pred HHHHHHHhhhhHHHHHHHHHHHhcccccccccchHHHHHHhhhhhcccChHHHHHHHHHccccchhhhhhhcCCCEEEEe
Confidence 00 0000 0 00112355789999999
Q ss_pred cCCCCcccchhh-HHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 196 GLCDDVVPYKYG-EKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 196 G~~D~~v~~~~~-~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
|++|.++|++.+ +.+.+.++ +.++++++++||.++.+..+.+.+-+.++++
T Consensus 229 G~~D~~~p~~~~~~~~~~~~p-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl~ 280 (281)
T 3fob_A 229 GDSDATVPFEYSGKLTHEAIP-----NSKVALIKGGPHGLNATHAKEFNEALLLFLK 280 (281)
T ss_dssp ETTCSSSCGGGTHHHHHHHST-----TCEEEEETTCCTTHHHHTHHHHHHHHHHHHC
T ss_pred cCCCCCcCHHHHHHHHHHhCC-----CceEEEeCCCCCchhhhhHHHHHHHHHHHhh
Confidence 999999999876 55566666 6799999999999987777666666666553
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=99.94 E-value=7.9e-26 Score=173.94 Aligned_cols=190 Identities=15% Similarity=0.130 Sum_probs=137.9
Q ss_pred CCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025121 31 GKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
++.+|+|||+||++++...|..+++.|++ ||.|+++|+||+|.+..... + .....++.+.++++.
T Consensus 17 g~~~p~vv~~HG~~~~~~~~~~~~~~l~~-g~~v~~~D~~G~G~S~~~~~------~--------~~~~~~~~~~~~~~~ 81 (269)
T 4dnp_A 17 GSGERVLVLAHGFGTDQSAWNRILPFFLR-DYRVVLYDLVCAGSVNPDFF------D--------FRRYTTLDPYVDDLL 81 (269)
T ss_dssp CSCSSEEEEECCTTCCGGGGTTTGGGGTT-TCEEEEECCTTSTTSCGGGC------C--------TTTCSSSHHHHHHHH
T ss_pred CCCCCEEEEEeCCCCcHHHHHHHHHHHhC-CcEEEEEcCCCCCCCCCCCC------C--------ccccCcHHHHHHHHH
Confidence 34568999999999999999999999986 99999999998875522110 0 011123455566666
Q ss_pred HHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhh-----------hh-----
Q 025121 111 NLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL-----------RN----- 174 (257)
Q Consensus 111 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-----------~~----- 174 (257)
.+++..... +++|+||||||.+++.++.+. |+++++++++++........ ..
T Consensus 82 ~~~~~~~~~-~~~l~GhS~Gg~~a~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (269)
T 4dnp_A 82 HILDALGID-CCAYVGHSVSAMIGILASIRR-----------PELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAM 149 (269)
T ss_dssp HHHHHTTCC-SEEEEEETHHHHHHHHHHHHC-----------TTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHH
T ss_pred HHHHhcCCC-eEEEEccCHHHHHHHHHHHhC-----------cHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhc
Confidence 666655434 999999999999999999954 88999999998753211000 00
Q ss_pred ------cc---------------------------------------ccchHHHhhhcCCCEEEEccCCCCcccchhhHH
Q 025121 175 ------KI---------------------------------------EGSHEAARRAASLPILLTHGLCDDVVPYKYGEK 209 (257)
Q Consensus 175 ------~~---------------------------------------~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~ 209 (257)
.. ..........+++|+++++|++|.++|.+.++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~ 229 (269)
T 4dnp_A 150 EANYEAWVNGFAPLAVGADVPAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATY 229 (269)
T ss_dssp HHCHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBCHHHHHH
T ss_pred cccHHHHHHHhhhhhccCCChhHHHHHHHHHHccCcchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccCHHHHHH
Confidence 00 000011234568999999999999999999999
Q ss_pred HHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 210 SANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 210 ~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
+.+.++. .+++++++++||....+..+.+.+.|.+++.
T Consensus 230 ~~~~~~~----~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 267 (269)
T 4dnp_A 230 LKNHLGG----KNTVHWLNIEGHLPHLSAPTLLAQELRRALS 267 (269)
T ss_dssp HHHHSSS----CEEEEEEEEESSCHHHHCHHHHHHHHHHHHC
T ss_pred HHHhCCC----CceEEEeCCCCCCccccCHHHHHHHHHHHHh
Confidence 9998863 2799999999999887777777777766654
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=99.94 E-value=6.6e-26 Score=173.18 Aligned_cols=183 Identities=13% Similarity=0.128 Sum_probs=127.2
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.++|||+||++++...|..+++.|++.||+|+++|+||||.+.... .......+.+++.++.+++
T Consensus 16 ~~~vvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~GhG~s~~~~---------------~~~~~~~~~~d~~~~~~~l 80 (247)
T 1tqh_A 16 ERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEEL---------------VHTGPDDWWQDVMNGYEFL 80 (247)
T ss_dssp SCEEEEECCTTCCTHHHHHHHHHHHHTTCEEEECCCTTSSSCHHHH---------------TTCCHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCChHHHHHHHHHHHHCCCEEEecccCCCCCCHHHh---------------cCCCHHHHHHHHHHHHHHH
Confidence 4689999999999999999999997789999999999887321100 0112334444455555566
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc--hhhh-------h----------
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--RNLR-------N---------- 174 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~-------~---------- 174 (257)
++.... +++|+||||||.+++.++.+. | ++++|++++..... .... .
T Consensus 81 ~~~~~~-~~~lvG~SmGG~ia~~~a~~~-----------p--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (247)
T 1tqh_A 81 KNKGYE-KIAVAGLSLGGVFSLKLGYTV-----------P--IEGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSE 146 (247)
T ss_dssp HHHTCC-CEEEEEETHHHHHHHHHHTTS-----------C--CSCEEEESCCSSCCCHHHHHHHHHHHHHHHHHHHTCCH
T ss_pred HHcCCC-eEEEEEeCHHHHHHHHHHHhC-----------C--CCeEEEEcceeecCcchhhhHHHHHHHHHhhcccccch
Confidence 544333 899999999999999999853 5 88888765433211 0000 0
Q ss_pred --------ccc----c----------chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCC
Q 025121 175 --------KIE----G----------SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGH 232 (257)
Q Consensus 175 --------~~~----~----------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H 232 (257)
... . ........+++|+|+++|++|.++|++.++.+.+.++.. ++++++++++||
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~~---~~~~~~~~~~gH 223 (247)
T 1tqh_A 147 EQIEQEMEKFKQTPMKTLKALQELIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESP---VKQIKWYEQSGH 223 (247)
T ss_dssp HHHHHHHHHHTTSCCTTHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCS---SEEEEEETTCCS
T ss_pred HHHHhhhhcccCCCHHHHHHHHHHHHHHHhhcccCCCCEEEEecCCCCCCCcchHHHHHHhcCCC---ceEEEEeCCCce
Confidence 000 0 001123467899999999999999999999999988742 469999999999
Q ss_pred ccCHH-----HHHHHHHHHHH
Q 025121 233 YTVPK-----EMDEVCNWLTA 248 (257)
Q Consensus 233 ~~~~~-----~~~~~~~~l~~ 248 (257)
....+ ..+.+.+||.+
T Consensus 224 ~~~~e~~~~~~~~~i~~Fl~~ 244 (247)
T 1tqh_A 224 VITLDQEKDQLHEDIYAFLES 244 (247)
T ss_dssp SGGGSTTHHHHHHHHHHHHHH
T ss_pred eeccCccHHHHHHHHHHHHHh
Confidence 97632 34566677764
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=99.94 E-value=7.3e-26 Score=175.74 Aligned_cols=181 Identities=20% Similarity=0.180 Sum_probs=129.8
Q ss_pred eEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhc
Q 025121 35 ATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLS 114 (257)
Q Consensus 35 ~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (257)
++|||+||++++...|..+++.|++.||+|+++|+||+|.+.... ...++.+.++++..+++
T Consensus 24 ~pvvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~------------------~~~~~~~~a~dl~~~l~ 85 (277)
T 1brt_A 24 QPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPT------------------TGYDYDTFAADLNTVLE 85 (277)
T ss_dssp SEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS------------------SCCSHHHHHHHHHHHHH
T ss_pred CeEEEECCCCCcHHHHHHHHHHHhhCCCEEEEeCCCCCCCCCCCC------------------CCccHHHHHHHHHHHHH
Confidence 469999999999999999999998779999999999887543211 12234455555655555
Q ss_pred cCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCccc-ccceEEEeccCCCCc------------hh-h--------
Q 025121 115 TEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYV-NLRAVVGLSGWLPGS------------RN-L-------- 172 (257)
Q Consensus 115 ~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~------------~~-~-------- 172 (257)
..... +++|+||||||.+++.++.+. |+ +++++|++++..+.. .. +
T Consensus 86 ~l~~~-~~~lvGhS~Gg~va~~~a~~~-----------p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (277)
T 1brt_A 86 TLDLQ-DAVLVGFSTGTGEVARYVSSY-----------GTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVK 153 (277)
T ss_dssp HHTCC-SEEEEEEGGGHHHHHHHHHHH-----------CSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHH
T ss_pred HhCCC-ceEEEEECccHHHHHHHHHHc-----------CcceEEEEEEecCcCccccccccCccccccHHHHHHHHHHHh
Confidence 54333 899999999999999999964 77 899999987643210 00 0
Q ss_pred -------hh----ccc-------cch------------------------------HHHhhhcCCCEEEEccCCCCcccc
Q 025121 173 -------RN----KIE-------GSH------------------------------EAARRAASLPILLTHGLCDDVVPY 204 (257)
Q Consensus 173 -------~~----~~~-------~~~------------------------------~~~~~~~~~P~l~~~G~~D~~v~~ 204 (257)
.. .+. ... ......+++|+++++|++|.++|.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~ 233 (277)
T 1brt_A 154 ADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPI 233 (277)
T ss_dssp HCHHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSSCG
T ss_pred cCchhhHHHHHHHHhhccccccccCCHHHHHHHHHHHhccchHHHHHHHHHHhccchhhcccCCCCeEEEecCCCccCCh
Confidence 00 000 000 002245689999999999999999
Q ss_pred hhh-HHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 205 KYG-EKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 205 ~~~-~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
+.+ +.+.+.++ +.++++++++||..+.+..+.+.+.|.+++
T Consensus 234 ~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 275 (277)
T 1brt_A 234 ENTARVFHKALP-----SAEYVEVEGAPHGLLWTHAEEVNTALLAFL 275 (277)
T ss_dssp GGTHHHHHHHCT-----TSEEEEETTCCTTHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCC-----CCcEEEeCCCCcchhhhCHHHHHHHHHHHH
Confidence 888 88888886 668999999999988666555555555444
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.94 E-value=6.8e-26 Score=178.19 Aligned_cols=183 Identities=15% Similarity=0.104 Sum_probs=127.1
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCC-CcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTR-PVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~-g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
+.|+||++||++++...|..+++.|+..||+|+++|+||| |.+.... .......+.+++..+.+
T Consensus 34 ~~~~VvllHG~g~~~~~~~~~~~~L~~~G~~Vi~~D~rGh~G~S~~~~---------------~~~~~~~~~~D~~~~~~ 98 (305)
T 1tht_A 34 KNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSI---------------DEFTMTTGKNSLCTVYH 98 (305)
T ss_dssp CSCEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEECCCBCC-----------------------CCCHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCccCchHHHHHHHHHHHCCCEEEEeeCCCCCCCCCCcc---------------cceehHHHHHHHHHHHH
Confidence 5689999999999999999999999878999999999987 6442110 01123344455555556
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhh------------cc---
Q 025121 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN------------KI--- 176 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~------------~~--- 176 (257)
+++.... .+++|+||||||.+++.++.+ + ++.+++++++.......... ..
T Consensus 99 ~l~~~~~-~~~~lvGhSmGG~iA~~~A~~------------~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (305)
T 1tht_A 99 WLQTKGT-QNIGLIAASLSARVAYEVISD------------L-ELSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPND 164 (305)
T ss_dssp HHHHTTC-CCEEEEEETHHHHHHHHHTTT------------S-CCSEEEEESCCSCHHHHHHHHHSSCGGGSCGGGCCSE
T ss_pred HHHhCCC-CceEEEEECHHHHHHHHHhCc------------c-CcCEEEEecCchhHHHHHHHHhhhhhhhcchhhCccc
Confidence 6553332 499999999999999999873 4 78888887764321100000 00
Q ss_pred ----------------------cc--chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCC
Q 025121 177 ----------------------EG--SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGH 232 (257)
Q Consensus 177 ----------------------~~--~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H 232 (257)
.. ........+++|+|+++|++|.++|++.++.+.+.++.. ++++++++++||
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~i~~~---~~~l~~i~~agH 241 (305)
T 1tht_A 165 LDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTG---HCKLYSLLGSSH 241 (305)
T ss_dssp EEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCTTC---CEEEEEETTCCS
T ss_pred ccccccccCHHHHHHHHHhccccchhhHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhcCCC---CcEEEEeCCCCC
Confidence 00 011234567899999999999999999988888877533 679999999999
Q ss_pred ccCHHHHHHHHHHHHH
Q 025121 233 YTVPKEMDEVCNWLTA 248 (257)
Q Consensus 233 ~~~~~~~~~~~~~l~~ 248 (257)
.+. +..+.+.+|+.+
T Consensus 242 ~~~-e~p~~~~~fl~~ 256 (305)
T 1tht_A 242 DLG-ENLVVLRNFYQS 256 (305)
T ss_dssp CTT-SSHHHHHHHHHH
T ss_pred chh-hCchHHHHHHHH
Confidence 986 555556666654
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.94 E-value=3.8e-26 Score=174.82 Aligned_cols=194 Identities=20% Similarity=0.196 Sum_probs=138.8
Q ss_pred eEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHH
Q 025121 24 THVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLD 103 (257)
Q Consensus 24 ~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 103 (257)
.+++.+.+++.|+||++||++++...|..+++.|+. +|.|+++|.+.+|.+ ...|++.... .......+.
T Consensus 52 ~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~-~~~v~~~~~d~~g~g------~s~~~~~~~~---~~~~~~~~~ 121 (251)
T 2r8b_A 52 FHKSRAGVAGAPLFVLLHGTGGDENQFFDFGARLLP-QATILSPVGDVSEHG------AARFFRRTGE---GVYDMVDLE 121 (251)
T ss_dssp CEEEECCCTTSCEEEEECCTTCCHHHHHHHHHHHST-TSEEEEECCSEEETT------EEESSCBCGG---GCBCHHHHH
T ss_pred eEEEeCCCCCCcEEEEEeCCCCCHhHHHHHHHhcCC-CceEEEecCCcCCCC------CcccccCCCC---CcCCHHHHH
Confidence 344555556789999999999999999999999985 599999953332221 1233322111 111233333
Q ss_pred HHHHHHHHHh----ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccc
Q 025121 104 ASAAHIANLL----STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGS 179 (257)
Q Consensus 104 ~~~~~~~~~~----~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 179 (257)
+.+.++.+++ ++. ...+++|+||||||.+++.++.+. ++++++++++++..+....
T Consensus 122 ~~~~~~~~~l~~~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~-----------p~~v~~~v~~~~~~~~~~~-------- 181 (251)
T 2r8b_A 122 RATGKMADFIKANREHY-QAGPVIGLGFSNGANILANVLIEQ-----------PELFDAAVLMHPLIPFEPK-------- 181 (251)
T ss_dssp HHHHHHHHHHHHHHHHH-TCCSEEEEEETHHHHHHHHHHHHS-----------TTTCSEEEEESCCCCSCCC--------
T ss_pred HHHHHHHHHHHHHHhcc-CCCcEEEEEECHHHHHHHHHHHhC-----------CcccCeEEEEecCCCcccc--------
Confidence 3333333333 222 334999999999999999999854 7889999999988764320
Q ss_pred hHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 180 HEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 180 ~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
.....+++|+++++|++|.+++.+.++.+.+.+++.+. ++++ .+++++|.+..+..+.+.+||.+.++
T Consensus 182 --~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~-~~~~-~~~~~gH~~~~~~~~~~~~~l~~~l~ 249 (251)
T 2r8b_A 182 --ISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGG-TVET-VWHPGGHEIRSGEIDAVRGFLAAYGG 249 (251)
T ss_dssp --CCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSS-EEEE-EEESSCSSCCHHHHHHHHHHHGGGC-
T ss_pred --ccccccCCcEEEeccCCCccCCHHHHHHHHHHHHHcCC-eEEE-EecCCCCccCHHHHHHHHHHHHHhcC
Confidence 01134578999999999999999999999999997654 5555 66678999999999999999998875
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.7e-25 Score=173.98 Aligned_cols=191 Identities=18% Similarity=0.149 Sum_probs=138.1
Q ss_pred CCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025121 28 RPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 28 ~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
.+.+...|+|||+||++++...|..+++.|++.||.|+++|+||+|.+.... ....++.+.++
T Consensus 40 ~~~~~~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-----------------~~~~~~~~~~~ 102 (315)
T 4f0j_A 40 APKKANGRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQVGFCKSSKPA-----------------HYQYSFQQLAA 102 (315)
T ss_dssp CCSSCCSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS-----------------SCCCCHHHHHH
T ss_pred CCCCCCCCeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeecCCCCCCCCCC-----------------ccccCHHHHHH
Confidence 3444667899999999999999999999998889999999999876543211 11234455566
Q ss_pred HHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh--------hc----
Q 025121 108 HIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR--------NK---- 175 (257)
Q Consensus 108 ~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--------~~---- 175 (257)
++..+++..... +++|+|||+||.+++.++.+. ++++++++++++......... ..
T Consensus 103 ~~~~~~~~~~~~-~~~l~G~S~Gg~~a~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (315)
T 4f0j_A 103 NTHALLERLGVA-RASVIGHSMGGMLATRYALLY-----------PRQVERLVLVNPIGLEDWKALGVPWRSVDDWYRRD 170 (315)
T ss_dssp HHHHHHHHTTCS-CEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESCSCSSCHHHHTCCCCCHHHHHHHH
T ss_pred HHHHHHHHhCCC-ceEEEEecHHHHHHHHHHHhC-----------cHhhheeEEecCcccCCcccccchhhhhHHHHhhc
Confidence 666666655444 999999999999999999964 889999999987532110000 00
Q ss_pred c-----------------------------------c--------------------cchHHHhhhcCCCEEEEccCCCC
Q 025121 176 I-----------------------------------E--------------------GSHEAARRAASLPILLTHGLCDD 200 (257)
Q Consensus 176 ~-----------------------------------~--------------------~~~~~~~~~~~~P~l~~~G~~D~ 200 (257)
. . .........+++|+++++|++|.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~lii~G~~D~ 250 (315)
T 4f0j_A 171 LQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQPVVYELDRLQMPTLLLIGEKDN 250 (315)
T ss_dssp TTCCHHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCC
T ss_pred ccCChHHHHHHHHHHHhccccCCchHHHHHHHHHHhhccCcchhhHHHHHhcCccccchhhhhcccCCCCeEEEEecCCC
Confidence 0 0 00001245678999999999999
Q ss_pred ccc----------------chhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcCc
Q 025121 201 VVP----------------YKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLGL 252 (257)
Q Consensus 201 ~v~----------------~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 252 (257)
++| .+.++.+.+.++ ++++++++++||.+..+..+.+.+.|.+++..
T Consensus 251 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~ 313 (315)
T 4f0j_A 251 TAIGKDAAPAELKARLGNYAQLGKDAARRIP-----QATLVEFPDLGHTPQIQAPERFHQALLEGLQT 313 (315)
T ss_dssp CCTTGGGSCHHHHTTSCCHHHHHHHHHHHST-----TEEEEEETTCCSCHHHHSHHHHHHHHHHHHCC
T ss_pred cCccccccccccccccccchhhhhHHHhhcC-----CceEEEeCCCCcchhhhCHHHHHHHHHHHhcc
Confidence 999 555566666664 67999999999998877777777777776653
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-25 Score=174.88 Aligned_cols=182 Identities=21% Similarity=0.203 Sum_probs=130.1
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.++|||+||++++...|..+++.|++.||+|+++|+||+|.+.... ...++.+.++++..++
T Consensus 23 ~~pvvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~------------------~~~~~~~~~~dl~~~l 84 (279)
T 1hkh_A 23 GQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVN------------------TGYDYDTFAADLHTVL 84 (279)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCCCS------------------SCCSHHHHHHHHHHHH
T ss_pred CCcEEEEcCCCchhhHHhhhHHHHHhCCcEEEEeCCCCCCCCCCCC------------------CCCCHHHHHHHHHHHH
Confidence 3569999999999999999999998789999999999887543211 1123444555555555
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCccc-ccceEEEeccCCCCch------------hh---h----
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYV-NLRAVVGLSGWLPGSR------------NL---R---- 173 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~------------~~---~---- 173 (257)
+..... +++|+||||||.+++.++.+. |+ +++++|++++..+... .+ .
T Consensus 85 ~~l~~~-~~~lvGhS~Gg~va~~~a~~~-----------p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (279)
T 1hkh_A 85 ETLDLR-DVVLVGFSMGTGELARYVARY-----------GHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAK 152 (279)
T ss_dssp HHHTCC-SEEEEEETHHHHHHHHHHHHH-----------CSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHH
T ss_pred HhcCCC-ceEEEEeChhHHHHHHHHHHc-----------CccceeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhh
Confidence 544333 899999999999999999864 77 8999999886433110 00 0
Q ss_pred ---------------h-------ccc---------------------------cchHHHhhhc---CCCEEEEccCCCCc
Q 025121 174 ---------------N-------KIE---------------------------GSHEAARRAA---SLPILLTHGLCDDV 201 (257)
Q Consensus 174 ---------------~-------~~~---------------------------~~~~~~~~~~---~~P~l~~~G~~D~~ 201 (257)
. ... .........+ ++|+++++|++|.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~P~lii~G~~D~~ 232 (279)
T 1hkh_A 153 GDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNI 232 (279)
T ss_dssp HCHHHHHHHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSS
T ss_pred hhhhhhHHHHHhhhhhcccCCcccccHHHHHhhhhhhccCcHHHHHHHHHHHhhchhhhHHHhccCCCCEEEEEcCCCcc
Confidence 0 000 0000122345 89999999999999
Q ss_pred ccchhh-HHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 202 VPYKYG-EKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 202 v~~~~~-~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
+|.+.+ +.+.+.++ +.++++++++||.+..+..+.+.+.|.+++
T Consensus 233 ~~~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 277 (279)
T 1hkh_A 233 LPIDATARRFHQAVP-----EADYVEVEGAPHGLLWTHADEVNAALKTFL 277 (279)
T ss_dssp SCTTTTHHHHHHHCT-----TSEEEEETTCCTTHHHHTHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHhCC-----CeeEEEeCCCCccchhcCHHHHHHHHHHHh
Confidence 999887 88888776 679999999999988666666555555544
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=7e-26 Score=174.34 Aligned_cols=188 Identities=13% Similarity=0.114 Sum_probs=137.7
Q ss_pred CCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 30 KGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 30 ~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
....+|+|||+||++++...|..+++.|.+.||.|+++|+||+|.+... .....++.+.++++
T Consensus 8 ~~~~~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~-----------------~~~~~~~~~~~~~~ 70 (267)
T 3sty_A 8 SPFVKKHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLGASGINPKQ-----------------ALQIPNFSDYLSPL 70 (267)
T ss_dssp --CCCCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTCSCC-----------------GGGCCSHHHHHHHH
T ss_pred CCCCCCeEEEECCCCCCcchHHHHHHHHHhcCCeEEEeccccCCCCCCc-----------------CCccCCHHHHHHHH
Confidence 3456789999999999999999999999877999999999987654321 11124567778888
Q ss_pred HHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh-----hc---------
Q 025121 110 ANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR-----NK--------- 175 (257)
Q Consensus 110 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-----~~--------- 175 (257)
.++++......+++|+||||||.+++.++.+. |+++++++++++..+...... ..
T Consensus 71 ~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (267)
T 3sty_A 71 MEFMASLPANEKIILVGHALGGLAISKAMETF-----------PEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLD 139 (267)
T ss_dssp HHHHHTSCTTSCEEEEEETTHHHHHHHHHHHS-----------GGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTT
T ss_pred HHHHHhcCCCCCEEEEEEcHHHHHHHHHHHhC-----------hhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhh
Confidence 88887764345999999999999999999964 889999999887543221000 00
Q ss_pred --c-------------------------ccc-h--------------------H------HHhhhcCCCEEEEccCCCCc
Q 025121 176 --I-------------------------EGS-H--------------------E------AARRAASLPILLTHGLCDDV 201 (257)
Q Consensus 176 --~-------------------------~~~-~--------------------~------~~~~~~~~P~l~~~G~~D~~ 201 (257)
. ... . . ......++|+++++|++|.+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~ 219 (267)
T 3sty_A 140 NCVTYENGPTNPPTTLIAGPKFLATNVYHLSPIEDLALATALVRPLYLYLAEDISKEVVLSSKRYGSVKRVFIVATENDA 219 (267)
T ss_dssp CEEECTTCTTSCCCEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCCHHHHHHHCCCCTTTGGGSCEEEEECCCSCH
T ss_pred hhhhhhhhhhcccchhhhhHHHHHHhhcccCCHHHHHHHHHhhccchhHHHHHhhcchhcccccccCCCEEEEEeCCCCc
Confidence 0 000 0 0 00112258999999999999
Q ss_pred ccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 202 VPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 202 v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
++.+..+.+.+.++ ++++++++++||.++.+..+.+.+.|.+++
T Consensus 220 ~~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 263 (267)
T 3sty_A 220 LKKEFLKLMIEKNP-----PDEVKEIEGSDHVTMMSKPQQLFTTLLSIA 263 (267)
T ss_dssp HHHHHHHHHHHHSC-----CSEEEECTTCCSCHHHHSHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHhCC-----CceEEEeCCCCccccccChHHHHHHHHHHH
Confidence 99999999988886 679999999999988666555555555544
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-25 Score=169.18 Aligned_cols=198 Identities=15% Similarity=0.104 Sum_probs=137.3
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
++.|+||++||++++...|..+++.|++.||.|+++|++++|.+...-.....++.. ...........+++..+.+
T Consensus 30 ~~~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~d~~~~~~ 105 (241)
T 3f67_A 30 GPLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPELYFRQGDPNEYHDIPTLFKE----LVSKVPDAQVLADLDHVAS 105 (241)
T ss_dssp SCEEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECTTTTTCCGGGCCSHHHHHHH----TGGGSCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecccccCCCCCchhhHHHHHHH----hhhcCCchhhHHHHHHHHH
Confidence 567999999999999988999999998899999999998874322111000000000 0000112333444555555
Q ss_pred HhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhhhcCCC
Q 025121 112 LLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLP 190 (257)
Q Consensus 112 ~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 190 (257)
.+.... ...+++|+|||+||.+++.++.+. + .+.+++++.+.+....... ....+......+++|
T Consensus 106 ~l~~~~~d~~~i~l~G~S~Gg~~a~~~a~~~-----------~-~~~~~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~P 171 (241)
T 3f67_A 106 WAARHGGDAHRLLITGFCWGGRITWLYAAHN-----------P-QLKAAVAWYGKLVGEKSLN--SPKHPVDIAVDLNAP 171 (241)
T ss_dssp HHHTTTEEEEEEEEEEETHHHHHHHHHHTTC-----------T-TCCEEEEESCCCSCCCCSS--SCCCHHHHGGGCCSC
T ss_pred HHHhccCCCCeEEEEEEcccHHHHHHHHhhC-----------c-CcceEEEEeccccCCCccC--CccCHHHhhhhcCCC
Confidence 555443 235999999999999999999853 4 4777887776654322111 112233445667899
Q ss_pred EEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC------------HHHHHHHHHHHHH
Q 025121 191 ILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV------------PKEMDEVCNWLTA 248 (257)
Q Consensus 191 ~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~------------~~~~~~~~~~l~~ 248 (257)
+++++|++|.++|.+.++.+.+.+++.+. +++++++++++|.+. .+.++.+.+||.+
T Consensus 172 ~l~~~g~~D~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 240 (241)
T 3f67_A 172 VLGLYGAKDASIPQDTVETMRQALRAANA-TAEIVVYPEADHAFNADYRASYHEESAKDGWQRMLAWFAQ 240 (241)
T ss_dssp EEEEEETTCTTSCHHHHHHHHHHHHHTTC-SEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTT
T ss_pred EEEEEecCCCCCCHHHHHHHHHHHHHcCC-CcEEEEECCCCcceecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999988765 789999999999875 2346677777754
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.2e-26 Score=176.57 Aligned_cols=188 Identities=15% Similarity=0.160 Sum_probs=136.9
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
+.+|+|||+||++++...|..+++.|++ ||.|+++|+||+|.+..... ......++.+.++++..
T Consensus 26 ~~~~~vv~lHG~~~~~~~~~~~~~~l~~-g~~v~~~d~~G~G~s~~~~~--------------~~~~~~~~~~~~~~~~~ 90 (282)
T 3qvm_A 26 GGEKTVLLAHGFGCDQNMWRFMLPELEK-QFTVIVFDYVGSGQSDLESF--------------STKRYSSLEGYAKDVEE 90 (282)
T ss_dssp CSSCEEEEECCTTCCGGGGTTTHHHHHT-TSEEEECCCTTSTTSCGGGC--------------CTTGGGSHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCCcchHHHHHHHHhc-CceEEEEecCCCCCCCCCCC--------------CccccccHHHHHHHHHH
Confidence 4458999999999999999999999985 99999999998765432110 01123356666777777
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhh-----------------
Q 025121 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN----------------- 174 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----------------- 174 (257)
+++.... .+++|+|||+||.+++.++.+. |+++++++++++..........
T Consensus 91 ~~~~~~~-~~~~lvG~S~Gg~~a~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (282)
T 3qvm_A 91 ILVALDL-VNVSIIGHSVSSIIAGIASTHV-----------GDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLM 158 (282)
T ss_dssp HHHHTTC-CSEEEEEETHHHHHHHHHHHHH-----------GGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHH
T ss_pred HHHHcCC-CceEEEEecccHHHHHHHHHhC-----------chhhheEEEecCcchhccCchhhhchhccccHHHHHHHH
Confidence 7766544 3999999999999999999854 8899999999876432211000
Q ss_pred --------------------------cc--------------------ccchHHHhhhcCCCEEEEccCCCCcccchhhH
Q 025121 175 --------------------------KI--------------------EGSHEAARRAASLPILLTHGLCDDVVPYKYGE 208 (257)
Q Consensus 175 --------------------------~~--------------------~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~ 208 (257)
.+ ..........+++|+++++|++|.++|.+.++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~ 238 (282)
T 3qvm_A 159 DKNYIGWANYLAPLVMGASHSSELIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQ 238 (282)
T ss_dssp HHCHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCCHHHHH
T ss_pred hcchhhHHHHHHhhccCCccchhhHHHHHHHHhcCCcHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCCHHHHH
Confidence 00 00001133567899999999999999999999
Q ss_pred HHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 209 KSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 209 ~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
.+.+.++ +.++++++++||.+..+..+.+.+.+.+++.
T Consensus 239 ~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 276 (282)
T 3qvm_A 239 YMAENIP-----NSQLELIQAEGHCLHMTDAGLITPLLIHFIQ 276 (282)
T ss_dssp HHHHHSS-----SEEEEEEEEESSCHHHHCHHHHHHHHHHHHH
T ss_pred HHHHhCC-----CCcEEEecCCCCcccccCHHHHHHHHHHHHH
Confidence 9988886 6799999999999876555555555444444
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-25 Score=171.86 Aligned_cols=184 Identities=14% Similarity=0.130 Sum_probs=139.6
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
..|+|||+||++++...|..+++.|++ +|.|+++|+||+|.+.... .....++.+.++++..+
T Consensus 22 ~~~~vv~~HG~~~~~~~~~~~~~~L~~-~~~vi~~d~~G~G~s~~~~----------------~~~~~~~~~~~~~~~~~ 84 (278)
T 3oos_A 22 EGPPLCVTHLYSEYNDNGNTFANPFTD-HYSVYLVNLKGCGNSDSAK----------------NDSEYSMTETIKDLEAI 84 (278)
T ss_dssp SSSEEEECCSSEECCTTCCTTTGGGGG-TSEEEEECCTTSTTSCCCS----------------SGGGGSHHHHHHHHHHH
T ss_pred CCCeEEEEcCCCcchHHHHHHHHHhhc-CceEEEEcCCCCCCCCCCC----------------CcccCcHHHHHHHHHHH
Confidence 456899999999999999999999985 9999999999876543211 11233456667777777
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch----------------hhhh--
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR----------------NLRN-- 174 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----------------~~~~-- 174 (257)
++..... +++|+|||+||.+++.++.+. |+++++++++++...... .+..
T Consensus 85 ~~~l~~~-~~~lvG~S~Gg~~a~~~a~~~-----------p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (278)
T 3oos_A 85 REALYIN-KWGFAGHSAGGMLALVYATEA-----------QESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIM 152 (278)
T ss_dssp HHHTTCS-CEEEEEETHHHHHHHHHHHHH-----------GGGEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHHHHHHH
T ss_pred HHHhCCC-eEEEEeecccHHHHHHHHHhC-----------chhhCeEEEecCccccccccccchhhhhhchhHHHHHHHH
Confidence 7665444 999999999999999999964 889999999988655000 0000
Q ss_pred -------------------------------------------------------ccccchHHHhhhcCCCEEEEccCCC
Q 025121 175 -------------------------------------------------------KIEGSHEAARRAASLPILLTHGLCD 199 (257)
Q Consensus 175 -------------------------------------------------------~~~~~~~~~~~~~~~P~l~~~G~~D 199 (257)
............+++|+++++|++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D 232 (278)
T 3oos_A 153 NALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHD 232 (278)
T ss_dssp HHHTCTTSCHHHHHHHHHHHHHHHCSCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCHHHHTTCCSCEEEEEETTC
T ss_pred HhhcccccCchHHHHHHHHHhhcccCCcHHHHHHhhccccchhHHHHHHHhhhcccccccHHHHHhCCCCCEEEEEeccC
Confidence 0000011234567899999999999
Q ss_pred CcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 200 DVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 200 ~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
.++|.+.++.+.+.++ ++++++++++||.+..+..+.+.+.|.+++
T Consensus 233 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 278 (278)
T 3oos_A 233 VQCPYIFSCEIANLIP-----NATLTKFEESNHNPFVEEIDKFNQFVNDTL 278 (278)
T ss_dssp SSSCHHHHHHHHHHST-----TEEEEEETTCSSCHHHHSHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHhhCC-----CcEEEEcCCcCCCcccccHHHHHHHHHhhC
Confidence 9999999999999886 679999999999999888888888887654
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.2e-25 Score=172.90 Aligned_cols=184 Identities=17% Similarity=0.144 Sum_probs=127.3
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
..++|||+||++++...|..+++.|++.||+|+++|+||||.+.... ...++.+.++++..+
T Consensus 21 ~~~~vvllHG~~~~~~~w~~~~~~L~~~g~~vi~~D~~G~G~S~~~~------------------~~~~~~~~~~d~~~~ 82 (276)
T 1zoi_A 21 DAPVIHFHHGWPLSADDWDAQLLFFLAHGYRVVAHDRRGHGRSSQVW------------------DGHDMDHYADDVAAV 82 (276)
T ss_dssp TSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS------------------SCCSHHHHHHHHHHH
T ss_pred CCCeEEEECCCCcchhHHHHHHHHHHhCCCEEEEecCCCCCCCCCCC------------------CCCCHHHHHHHHHHH
Confidence 34689999999999999999999998789999999999887543211 112344555555555
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc------------hhh--------
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS------------RNL-------- 172 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------~~~-------- 172 (257)
++..... +++|+||||||.+++.++.+. .|++++++|++++..+.. ...
T Consensus 83 l~~l~~~-~~~lvGhS~Gg~ia~~~a~~~----------~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (276)
T 1zoi_A 83 VAHLGIQ-GAVHVGHSTGGGEVVRYMARH----------PEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQAQVA 151 (276)
T ss_dssp HHHHTCT-TCEEEEETHHHHHHHHHHHHC----------TTSCCCCEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHH
T ss_pred HHHhCCC-ceEEEEECccHHHHHHHHHHh----------CHHheeeeEEecCCCccccccccccccccHHHHHHHHHHHH
Confidence 5544333 899999999999999987742 278899999887532210 000
Q ss_pred ----------h--hccc-------c------------------------------chHHHhhhcCCCEEEEccCCCCccc
Q 025121 173 ----------R--NKIE-------G------------------------------SHEAARRAASLPILLTHGLCDDVVP 203 (257)
Q Consensus 173 ----------~--~~~~-------~------------------------------~~~~~~~~~~~P~l~~~G~~D~~v~ 203 (257)
. .... . ........+++|+|+++|++|.++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~ 231 (276)
T 1zoi_A 152 SNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTEDLKGIQQPVLVMHGDDDQIVP 231 (276)
T ss_dssp HCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHHHCCSCEEEEEETTCSSSC
T ss_pred HhHHHHHHHhhhccccccccccccccHHHHHHHHhhhhhhhHHHHHHHHHHhcccchhhhccccCCCEEEEEcCCCcccC
Confidence 0 0000 0 0001234578999999999999999
Q ss_pred chhh-HHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 204 YKYG-EKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 204 ~~~~-~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
.+.. +.+.+.++ +.++++++++||.++.+..+.+.+-+.+++
T Consensus 232 ~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 274 (276)
T 1zoi_A 232 YENSGVLSAKLLP-----NGALKTYKGYPHGMPTTHADVINADLLAFI 274 (276)
T ss_dssp STTTHHHHHHHST-----TEEEEEETTCCTTHHHHTHHHHHHHHHHHH
T ss_pred hHHHHHHHHhhCC-----CceEEEcCCCCCchhhhCHHHHHHHHHHHh
Confidence 8844 44555554 679999999999988666666655555554
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.7e-25 Score=171.97 Aligned_cols=183 Identities=20% Similarity=0.171 Sum_probs=126.3
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.++|||+||++++...|..+++.|++.||+|+++|+||||.+.... ...++.+.++++..++
T Consensus 19 ~~~vvllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~------------------~~~~~~~~~~dl~~~l 80 (273)
T 1a8s_A 19 GQPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPW------------------SGNDMDTYADDLAQLI 80 (273)
T ss_dssp SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS------------------SCCSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCcHHHHhhHHhhHhhCCcEEEEECCCCCCCCCCCC------------------CCCCHHHHHHHHHHHH
Confidence 4689999999999999999999998789999999999887543210 1124455566666666
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc------------hhh---------
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS------------RNL--------- 172 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------~~~--------- 172 (257)
+..... +++|+||||||.+++.++.+. .|+++++++++++..+.. ...
T Consensus 81 ~~l~~~-~~~lvGhS~Gg~ia~~~a~~~----------~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (273)
T 1a8s_A 81 EHLDLR-DAVLFGFSTGGGEVARYIGRH----------GTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLA 149 (273)
T ss_dssp HHTTCC-SEEEEEETHHHHHHHHHHHHH----------CSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHH
T ss_pred HHhCCC-CeEEEEeChHHHHHHHHHHhc----------CchheeEEEEEcccCcccccCccccccCcHHHHHHHHHHhHh
Confidence 655433 899999999999999977642 267899998887532210 000
Q ss_pred ------h-----hccc-------c------------------------------chHHHhhhcCCCEEEEccCCCCcccc
Q 025121 173 ------R-----NKIE-------G------------------------------SHEAARRAASLPILLTHGLCDDVVPY 204 (257)
Q Consensus 173 ------~-----~~~~-------~------------------------------~~~~~~~~~~~P~l~~~G~~D~~v~~ 204 (257)
. .... . ........+++|+|+++|++|.++|.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~ 229 (273)
T 1a8s_A 150 DRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPI 229 (273)
T ss_dssp HHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHTCCSCEEEEEETTCSSSCS
T ss_pred hHHHHHHHhhcccccCcCCcccccCHHHHHHHHHhccccchhHHHHHHHHHhccChhhhhhcCCCCEEEEECCCCccCCh
Confidence 0 0000 0 00012345789999999999999998
Q ss_pred hhh-HHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 205 KYG-EKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 205 ~~~-~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
+.. +.+.+.++ +.++++++++||.++.+..+.+.+-+.+++
T Consensus 230 ~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 271 (273)
T 1a8s_A 230 EASGIASAALVK-----GSTLKIYSGAPHGLTDTHKDQLNADLLAFI 271 (273)
T ss_dssp TTTHHHHHHHST-----TCEEEEETTCCSCHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC-----CcEEEEeCCCCCcchhhCHHHHHHHHHHHH
Confidence 854 44455554 679999999999987665555554444443
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-24 Score=165.52 Aligned_cols=188 Identities=17% Similarity=0.124 Sum_probs=135.7
Q ss_pred EeCCCCCCceEEEEEccCCCCcc-----chHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchh
Q 025121 26 VVRPKGKHQATIVWLHGLGDNGS-----SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWE 100 (257)
Q Consensus 26 ~~~~~~~~~~~vi~~HG~~~~~~-----~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~ 100 (257)
++.+.+++.|+||++||+++... .|..+++.|+..||.|+++|+|++|.+... ......
T Consensus 39 ~~~p~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~----------------~~~~~~ 102 (249)
T 2i3d_A 39 YQPSKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGE----------------FDHGAG 102 (249)
T ss_dssp EECCSSTTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSC----------------CCSSHH
T ss_pred EEcCCCCCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCCCCCCCC----------------CCCccc
Confidence 44555567889999999853332 347788888888999999999976543211 011123
Q ss_pred hHHHHHHHHHHHhcc-CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccc
Q 025121 101 GLDASAAHIANLLST-EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGS 179 (257)
Q Consensus 101 ~~~~~~~~~~~~~~~-~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 179 (257)
.+ +++..+.+.+.. .....+++|+|||+||.+++.++.+. +. +++++++++.......
T Consensus 103 ~~-~d~~~~i~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----------p~-v~~~v~~~~~~~~~~~-------- 161 (249)
T 2i3d_A 103 EL-SDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRR-----------PE-IEGFMSIAPQPNTYDF-------- 161 (249)
T ss_dssp HH-HHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHC-----------TT-EEEEEEESCCTTTSCC--------
T ss_pred hH-HHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcC-----------CC-ccEEEEEcCchhhhhh--------
Confidence 33 333334444433 23334899999999999999999863 55 9999999987654321
Q ss_pred hHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhc-CceeeEEEEecCCCCccC---HHHHHHHHHHHHHhcCcC
Q 025121 180 HEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSIS-GFRHLTFKSFEGLGHYTV---PKEMDEVCNWLTARLGLE 253 (257)
Q Consensus 180 ~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~-~~~~~~~~~~~g~~H~~~---~~~~~~~~~~l~~~l~~~ 253 (257)
.....+++|+++++|++|.+++.+.++.+.+.++.. +. +++++++++++|.+. .+..+.+.+||.+.+...
T Consensus 162 --~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~H~~~~~~~~~~~~i~~fl~~~l~~~ 236 (249)
T 2i3d_A 162 --SFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGI-LITHRTLPGANHFFNGKVDELMGECEDYLDRRLNGE 236 (249)
T ss_dssp --TTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTC-CEEEEEETTCCTTCTTCHHHHHHHHHHHHHHHHTTC
T ss_pred --hhhcccCCCEEEEEcCCCCCCCHHHHHHHHHHHhhccCC-ceeEEEECCCCcccccCHHHHHHHHHHHHHHhcCCC
Confidence 112356899999999999999999999999999852 32 679999999999986 445688999999887643
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.93 E-value=5e-25 Score=170.10 Aligned_cols=181 Identities=13% Similarity=0.114 Sum_probs=133.0
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.|+|||+||++++...|..+++.|+ .+|+|+++|+||||.+.... ...++.+.++++..++
T Consensus 26 ~~~vvllHG~~~~~~~~~~~~~~L~-~~~~vi~~D~~G~G~S~~~~------------------~~~~~~~~~~dl~~~l 86 (266)
T 2xua_A 26 APWIVLSNSLGTDLSMWAPQVAALS-KHFRVLRYDTRGHGHSEAPK------------------GPYTIEQLTGDVLGLM 86 (266)
T ss_dssp CCEEEEECCTTCCGGGGGGGHHHHH-TTSEEEEECCTTSTTSCCCS------------------SCCCHHHHHHHHHHHH
T ss_pred CCeEEEecCccCCHHHHHHHHHHHh-cCeEEEEecCCCCCCCCCCC------------------CCCCHHHHHHHHHHHH
Confidence 6799999999999999999999997 46999999999887543211 1134556666777777
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch--hh-------------------
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR--NL------------------- 172 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~------------------- 172 (257)
+..... +++|+||||||.+++.+|.+. |++++++|++++...... .+
T Consensus 87 ~~l~~~-~~~lvGhS~Gg~va~~~A~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (266)
T 2xua_A 87 DTLKIA-RANFCGLSMGGLTGVALAARH-----------ADRIERVALCNTAARIGSPEVWVPRAVKARTEGMHALADAV 154 (266)
T ss_dssp HHTTCC-SEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESCCSSCSCHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HhcCCC-ceEEEEECHHHHHHHHHHHhC-----------hhhhheeEEecCCCCCCchHHHHHHHHHHHhcChHHHHHHH
Confidence 665444 899999999999999999964 889999999876532210 00
Q ss_pred -hhcccc-----c------------------------------hHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhh
Q 025121 173 -RNKIEG-----S------------------------------HEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSI 216 (257)
Q Consensus 173 -~~~~~~-----~------------------------------~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~ 216 (257)
...+.. . .......+++|+++++|++|.++|.+.++.+.+.++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~- 233 (266)
T 2xua_A 155 LPRWFTADYMEREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQGRELAQAIA- 233 (266)
T ss_dssp HHHHSCHHHHHHCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHST-
T ss_pred HHHHcCcccccCCHHHHHHHHHHHhhCCHHHHHHHHHHHhccCchhhhccCCCCEEEEEcCCCCcCCHHHHHHHHHhCC-
Confidence 000000 0 001234568999999999999999998888888887
Q ss_pred cCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 217 SGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 217 ~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
+.++++++ +||.+..+..+.+.+.+.+++.
T Consensus 234 ----~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~ 263 (266)
T 2xua_A 234 ----GARYVELD-ASHISNIERADAFTKTVVDFLT 263 (266)
T ss_dssp ----TCEEEEES-CCSSHHHHTHHHHHHHHHHHHT
T ss_pred ----CCEEEEec-CCCCchhcCHHHHHHHHHHHHH
Confidence 56899999 9999887666666666655554
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.93 E-value=5.9e-25 Score=170.15 Aligned_cols=184 Identities=22% Similarity=0.218 Sum_probs=129.2
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.++|||+||++++...|..+++.|.+.||+|+++|+||||.+.... ...++.+.++++..++
T Consensus 19 g~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~------------------~~~~~~~~~~dl~~~l 80 (274)
T 1a8q_A 19 GRPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVW------------------DGYDFDTFADDLNDLL 80 (274)
T ss_dssp SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS------------------SCCSHHHHHHHHHHHH
T ss_pred CceEEEECCCcchHHHHHHHHHHHHhCCCeEEEEcCCCCCCCCCCC------------------CCCcHHHHHHHHHHHH
Confidence 4689999999999999999999998789999999999887543210 1123455566666666
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc------------hhh---h-----
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS------------RNL---R----- 173 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------~~~---~----- 173 (257)
+..... +++|+||||||.+++.++.+. .|++++++|++++..+.. ..+ .
T Consensus 81 ~~l~~~-~~~lvGhS~Gg~ia~~~a~~~----------~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (274)
T 1a8q_A 81 TDLDLR-DVTLVAHSMGGGELARYVGRH----------GTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLT 149 (274)
T ss_dssp HHTTCC-SEEEEEETTHHHHHHHHHHHH----------CSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHH
T ss_pred HHcCCC-ceEEEEeCccHHHHHHHHHHh----------hhHheeeeeEecCCCccccccccCcccchHHHHHHHHHHhhc
Confidence 655433 899999999999999987642 267899999887643210 000 0
Q ss_pred -----------hccc-------c------------------------------chHHHhhhcCCCEEEEccCCCCcccch
Q 025121 174 -----------NKIE-------G------------------------------SHEAARRAASLPILLTHGLCDDVVPYK 205 (257)
Q Consensus 174 -----------~~~~-------~------------------------------~~~~~~~~~~~P~l~~~G~~D~~v~~~ 205 (257)
.... . ........+++|+++++|++|.++|.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~ 229 (274)
T 1a8q_A 150 ERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPID 229 (274)
T ss_dssp HHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCGG
T ss_pred cHHHHHHHhcccccccccccccccHHHHHHHHHHhhhcChHHHHHHHhhhhcCcHHHHhhcCCCCEEEEecCcCCCCCcH
Confidence 0000 0 000123457899999999999999988
Q ss_pred hh-HHHHHHhhhcCceeeEEEEecCCCCccCHH--HHHHHHHHHHHhcC
Q 025121 206 YG-EKSANCLSISGFRHLTFKSFEGLGHYTVPK--EMDEVCNWLTARLG 251 (257)
Q Consensus 206 ~~-~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~--~~~~~~~~l~~~l~ 251 (257)
.. +.+.+.++ +.++++++++||.++.+ ..+.+.+-+.+++.
T Consensus 230 ~~~~~~~~~~~-----~~~~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 230 ATGRKSAQIIP-----NAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp GTHHHHHHHST-----TCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhCC-----CceEEEECCCCCceecccCCHHHHHHHHHHHhc
Confidence 54 44455554 67999999999998876 77766666666553
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-25 Score=171.65 Aligned_cols=186 Identities=16% Similarity=0.170 Sum_probs=134.7
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
+..++|||+||++++...|..++..|+..||+|+++|+||||.+... .....++.+.++++.+
T Consensus 8 ~~g~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~-----------------~~~~~~~~~~a~dl~~ 70 (264)
T 2wfl_A 8 KQQKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRR-----------------LDEIHTFRDYSEPLME 70 (264)
T ss_dssp -CCCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCC-----------------GGGCCSHHHHHHHHHH
T ss_pred CCCCeEEEECCCccccchHHHHHHHHHhCCCEEEEeecCCCCCCCCC-----------------cccccCHHHHHHHHHH
Confidence 45678999999999999999999999767999999999988654211 0112345666777777
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch--------hhhh------c--
Q 025121 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR--------NLRN------K-- 175 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~~~------~-- 175 (257)
+++.....++++|+||||||.+++.++.++ |++++++|++++..+... .+.. .
T Consensus 71 ~l~~l~~~~~~~lvGhSmGG~va~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (264)
T 2wfl_A 71 VMASIPPDEKVVLLGHSFGGMSLGLAMETY-----------PEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLD 139 (264)
T ss_dssp HHHHSCTTCCEEEEEETTHHHHHHHHHHHC-----------GGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTTTTTT
T ss_pred HHHHhCCCCCeEEEEeChHHHHHHHHHHhC-----------hhhhceeEEEeeccCCCCcchhhHHHHhhhcCcchhhhh
Confidence 777664224899999999999999999864 888999888876422100 0000 0
Q ss_pred ----------------------c-----ccch-H----------------HH---------hhhcCCCEEEEccCCCCcc
Q 025121 176 ----------------------I-----EGSH-E----------------AA---------RRAASLPILLTHGLCDDVV 202 (257)
Q Consensus 176 ----------------------~-----~~~~-~----------------~~---------~~~~~~P~l~~~G~~D~~v 202 (257)
. .... . .. ....++|+++++|++|.++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~ 219 (264)
T 2wfl_A 140 SQFSTYGNPENPGMSMILGPQFMALKMFQNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSF 219 (264)
T ss_dssp CEEEEESCTTSCEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCHHHHTTSCCCCTTTGGGSCEEEEEETTCSSS
T ss_pred hhhhhccCCCCCcchhhhhHHHHHHHHhcCCCHHHHHHHHhccCCCcccccccccccccChHHhCCCCeEEEEeCCcCCC
Confidence 0 0000 0 00 0113689999999999999
Q ss_pred cchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 203 PYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 203 ~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
|.+.++.+.+.++ +.++++++++||..+.|..+.+.+.+.+++
T Consensus 220 ~~~~~~~~~~~~p-----~~~~~~i~~~gH~~~~e~P~~~~~~l~~f~ 262 (264)
T 2wfl_A 220 PVEFQKWFVESVG-----ADKVKEIKEADHMGMLSQPREVCKCLLDIS 262 (264)
T ss_dssp CHHHHHHHHHHHC-----CSEEEEETTCCSCHHHHSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCC-----CceEEEeCCCCCchhhcCHHHHHHHHHHHh
Confidence 9999888988886 669999999999999887777777666654
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.93 E-value=5.9e-25 Score=169.68 Aligned_cols=185 Identities=15% Similarity=0.104 Sum_probs=134.1
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
.+|+|||+||++++...|..+++.|++.||.|+++|+||+|.+.... .......+.+++..+.+.
T Consensus 39 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~---------------~~~~~~~~~~d~~~~i~~ 103 (270)
T 3rm3_A 39 GPVGVLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDM---------------ERTTFHDWVASVEEGYGW 103 (270)
T ss_dssp SSEEEEEECCTTCCGGGTHHHHHHHHHTTCEEEECCCTTCSSCHHHH---------------HTCCHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCChhHHHHHHHHHHHCCCEEEEeCCCCCCCCcccc---------------ccCCHHHHHHHHHHHHHH
Confidence 45899999999999999999999998889999999999876442110 011233334444444444
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc----------------
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI---------------- 176 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---------------- 176 (257)
+... ..+++|+|||+||.+++.++.+. |. +++++++++............
T Consensus 104 l~~~--~~~i~l~G~S~Gg~~a~~~a~~~-----------p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (270)
T 3rm3_A 104 LKQR--CQTIFVTGLSMGGTLTLYLAEHH-----------PD-ICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDL 169 (270)
T ss_dssp HHTT--CSEEEEEEETHHHHHHHHHHHHC-----------TT-CCEEEEESCCSCCHHHHHHSCC---CCSEEECCCCCC
T ss_pred HHhh--CCcEEEEEEcHhHHHHHHHHHhC-----------CC-ccEEEEEcceecccccccchhcchhHHHHHHHhCccc
Confidence 4433 34999999999999999999964 66 999999988654322111000
Q ss_pred ----------c--------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCC
Q 025121 177 ----------E--------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGH 232 (257)
Q Consensus 177 ----------~--------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H 232 (257)
. .........+++|+++++|++|.++|.+.++.+.+.++.. +++++++++++|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~---~~~~~~~~~~gH 246 (270)
T 3rm3_A 170 KNPDVKELAYEKTPTASLLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGISST---EKEIVRLRNSYH 246 (270)
T ss_dssp SCTTCCCCCCSEEEHHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHSCCS---SEEEEEESSCCS
T ss_pred cccchHhhcccccChhHHHHHHHHHHHHHhhhhhcCCCEEEEECCCCcccCHHHHHHHHHhcCCC---cceEEEeCCCCc
Confidence 0 0011234567899999999999999999999999998754 569999999999
Q ss_pred ccCH-----HHHHHHHHHHHHh
Q 025121 233 YTVP-----KEMDEVCNWLTAR 249 (257)
Q Consensus 233 ~~~~-----~~~~~~~~~l~~~ 249 (257)
.+.. +..+.+.+||.+.
T Consensus 247 ~~~~~~~~~~~~~~i~~fl~~~ 268 (270)
T 3rm3_A 247 VATLDYDQPMIIERSLEFFAKH 268 (270)
T ss_dssp CGGGSTTHHHHHHHHHHHHHHH
T ss_pred ccccCccHHHHHHHHHHHHHhc
Confidence 9863 3457777888764
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-25 Score=172.14 Aligned_cols=182 Identities=14% Similarity=0.184 Sum_probs=134.5
Q ss_pred eEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhc
Q 025121 35 ATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLS 114 (257)
Q Consensus 35 ~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (257)
|+|||+||++++...|..+++.|++.||.|+++|+||+|.+... .....++.+.++++.++++
T Consensus 5 ~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~-----------------~~~~~~~~~~~~~l~~~l~ 67 (258)
T 3dqz_A 5 HHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELAASGIDPRP-----------------IQAVETVDEYSKPLIETLK 67 (258)
T ss_dssp CEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSSC-----------------GGGCCSHHHHHHHHHHHHH
T ss_pred CcEEEECCCCCccccHHHHHHHHHhCCCEEEEecCCCCcCCCCC-----------------CCccccHHHhHHHHHHHHH
Confidence 79999999999999999999999878999999999987654321 1112456777888888887
Q ss_pred cCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhh----------------ccc-
Q 025121 115 TEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN----------------KIE- 177 (257)
Q Consensus 115 ~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----------------~~~- 177 (257)
......+++|+||||||.+++.++.+ +|++++++|++++..+....... ...
T Consensus 68 ~l~~~~~~~lvGhS~Gg~~a~~~a~~-----------~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (258)
T 3dqz_A 68 SLPENEEVILVGFSFGGINIALAADI-----------FPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSS 136 (258)
T ss_dssp TSCTTCCEEEEEETTHHHHHHHHHTT-----------CGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEE
T ss_pred HhcccCceEEEEeChhHHHHHHHHHh-----------ChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccch
Confidence 76543599999999999999999995 48899999999885442210000 000
Q ss_pred ------------------------cc--------------------------hHHHhhhcCCCEEEEccCCCCcccchhh
Q 025121 178 ------------------------GS--------------------------HEAARRAASLPILLTHGLCDDVVPYKYG 207 (257)
Q Consensus 178 ------------------------~~--------------------------~~~~~~~~~~P~l~~~G~~D~~v~~~~~ 207 (257)
.. ........++|+++++|++|.++|.+..
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 216 (258)
T 3dqz_A 137 HETRNGTMSLLKMGPKFMKARLYQNCPIEDYELAKMLHRQGSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIPCDFI 216 (258)
T ss_dssp EEETTEEEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCEECCHHHHHTSCCCCTTTGGGSCEEEEEETTCSSSCHHHH
T ss_pred hhhhccChhhhhhhHHHHHHHhhccCCHHHHHHHHHhccCCchhhhhhhccccccccccccCCEEEEECCCCeeeCHHHH
Confidence 00 0001122368999999999999999999
Q ss_pred HHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHh
Q 025121 208 EKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTAR 249 (257)
Q Consensus 208 ~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 249 (257)
+.+.+.++ +.++++++++||....+..+.+.+.|.++
T Consensus 217 ~~~~~~~~-----~~~~~~~~~~gH~~~~~~p~~~~~~i~~f 253 (258)
T 3dqz_A 217 RWMIDNFN-----VSKVYEIDGGDHMVMLSKPQKLFDSLSAI 253 (258)
T ss_dssp HHHHHHSC-----CSCEEEETTCCSCHHHHSHHHHHHHHHHH
T ss_pred HHHHHhCC-----cccEEEcCCCCCchhhcChHHHHHHHHHH
Confidence 99999886 56899999999998865554444444443
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-25 Score=169.12 Aligned_cols=184 Identities=17% Similarity=0.187 Sum_probs=138.0
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEcc--CCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICP--TAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~--d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
++.|+||++||++++...|..+++.|+. ||.|+++ |.+++|.+ .|+.... ........+.+.+..+
T Consensus 36 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~-g~~v~~~~~d~~g~g~s--------~~~~~~~---~~~~~~~~~~~~~~~~ 103 (226)
T 2h1i_A 36 TSKPVLLLLHGTGGNELDLLPLAEIVDS-EASVLSVRGNVLENGMP--------RFFRRLA---EGIFDEEDLIFRTKEL 103 (226)
T ss_dssp TTSCEEEEECCTTCCTTTTHHHHHHHHT-TSCEEEECCSEEETTEE--------ESSCEEE---TTEECHHHHHHHHHHH
T ss_pred CCCcEEEEEecCCCChhHHHHHHHHhcc-CceEEEecCcccCCcch--------hhccccC---ccCcChhhHHHHHHHH
Confidence 5788999999999999999999999985 9999999 65544322 2221100 0011233344444444
Q ss_pred HHHh----ccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHh
Q 025121 110 ANLL----STEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAAR 184 (257)
Q Consensus 110 ~~~~----~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 184 (257)
.+++ +... ...+++++|||+||.+++.++.+. +++++++++++++.+..... ..
T Consensus 104 ~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----------~~~~~~~v~~~~~~~~~~~~----------~~ 162 (226)
T 2h1i_A 104 NEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHY-----------ENALKGAVLHHPMVPRRGMQ----------LA 162 (226)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHC-----------TTSCSEEEEESCCCSCSSCC----------CC
T ss_pred HHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhC-----------hhhhCEEEEeCCCCCcCccc----------cc
Confidence 4433 3332 335999999999999999999854 77899999999987654311 11
Q ss_pred hhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 185 RAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 185 ~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
...++|+++++|++|.+++.+.++.+.+.+++.+. ++++ ++++++|.+..+..+.+.+||.+.+
T Consensus 163 ~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~-~~~~-~~~~~gH~~~~~~~~~~~~~l~~~l 226 (226)
T 2h1i_A 163 NLAGKSVFIAAGTNDPICSSAESEELKVLLENANA-NVTM-HWENRGHQLTMGEVEKAKEWYDKAF 226 (226)
T ss_dssp CCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTC-EEEE-EEESSTTSCCHHHHHHHHHHHHHHC
T ss_pred cccCCcEEEEeCCCCCcCCHHHHHHHHHHHHhcCC-eEEE-EeCCCCCCCCHHHHHHHHHHHHHhC
Confidence 23579999999999999999999999999998765 6777 9999999999999999999998764
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6.4e-25 Score=166.15 Aligned_cols=195 Identities=18% Similarity=0.162 Sum_probs=139.3
Q ss_pred EEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcc-cc-------cccCCCCCCCCC
Q 025121 25 HVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPC-TA-------WFDVGELSDDGP 96 (257)
Q Consensus 25 ~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~-~~-------w~~~~~~~~~~~ 96 (257)
+++.+.+.+.|+||++||++++...|..+++.|++.||.|+++|+|++|.+....... .. |. ..
T Consensus 19 ~~~~p~~~~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~--------~~ 90 (236)
T 1zi8_A 19 LVGSPAKAPAPVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQREQAYKLW--------QA 90 (236)
T ss_dssp EEECCSSCSEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTCHHHHHHHHHHH--------HH
T ss_pred EEECCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccccccCCCcccccccchhhhhhhhhhh--------hc
Confidence 3444445678999999999999999999999998889999999999876433211000 00 00 00
Q ss_pred CchhhHHHHHHHHHHHhccCCC-CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhc
Q 025121 97 EDWEGLDASAAHIANLLSTEPA-DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNK 175 (257)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 175 (257)
.......+++..+.+.+..... ..+++++|||+||.+++.++.+. + +++++++++.....
T Consensus 91 ~~~~~~~~d~~~~~~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----------~--~~~~v~~~~~~~~~------ 151 (236)
T 1zi8_A 91 FDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASKG-----------Y--VDRAVGYYGVGLEK------ 151 (236)
T ss_dssp CCHHHHHHHHHHHHHHHTSSTTEEEEEEEEEETHHHHHHHHHHHHT-----------C--SSEEEEESCSSGGG------
T ss_pred cCcchhhHHHHHHHHHHHhccCCCCCEEEEEECcCHHHHHHHhccC-----------C--ccEEEEecCccccc------
Confidence 1123334444444555554432 35999999999999999999853 4 88888887754221
Q ss_pred cccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCH------------HHHHHHH
Q 025121 176 IEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVP------------KEMDEVC 243 (257)
Q Consensus 176 ~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~------------~~~~~~~ 243 (257)
.......+++|+++++|++|.++|.+.++.+.+.++..+ +++++++++++|.+.. +..+.+.
T Consensus 152 ----~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~ 225 (236)
T 1zi8_A 152 ----QLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANP--LLQVHWYEEAGHSFARTGSSGYVASAAALANERTL 225 (236)
T ss_dssp ----CGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCT--TEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHH
T ss_pred ----chhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHHHhCC--CceEEEECCCCcccccCCCCccCHHHHHHHHHHHH
Confidence 112234568999999999999999999999999997643 6799999999997762 3568899
Q ss_pred HHHHHhcCc
Q 025121 244 NWLTARLGL 252 (257)
Q Consensus 244 ~~l~~~l~~ 252 (257)
+||.+.++.
T Consensus 226 ~fl~~~l~~ 234 (236)
T 1zi8_A 226 DFLVPLQSR 234 (236)
T ss_dssp HHHGGGCC-
T ss_pred HHHHHhcCC
Confidence 999888764
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-24 Score=160.17 Aligned_cols=182 Identities=19% Similarity=0.220 Sum_probs=134.6
Q ss_pred eCCCCCCceEEEEEccCCCCccchHH--HhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025121 27 VRPKGKHQATIVWLHGLGDNGSSWSQ--LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 27 ~~~~~~~~~~vi~~HG~~~~~~~~~~--~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
+.+.+ +.|+||++||++++...|.. +++.|++.||.|+++|.|++|.+.... .......++.+
T Consensus 21 ~~~~~-~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~--------------~~~~~~~~~~~ 85 (207)
T 3bdi_A 21 MVTDS-NRRSIALFHGYSFTSMDWDKADLFNNYSKIGYNVYAPDYPGFGRSASSE--------------KYGIDRGDLKH 85 (207)
T ss_dssp ECCTT-CCEEEEEECCTTCCGGGGGGGTHHHHHHTTTEEEEEECCTTSTTSCCCT--------------TTCCTTCCHHH
T ss_pred EeccC-CCCeEEEECCCCCCccccchHHHHHHHHhCCCeEEEEcCCcccccCccc--------------CCCCCcchHHH
Confidence 44444 67899999999999999999 999998889999999999765431100 00011114556
Q ss_pred HHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHh
Q 025121 105 SAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAAR 184 (257)
Q Consensus 105 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 184 (257)
.++.+..+++.... ++++++|||+||.+++.++.+. ++++++++++++..... + ....
T Consensus 86 ~~~~~~~~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~-----------~~~~~~~v~~~~~~~~~--~--------~~~~ 143 (207)
T 3bdi_A 86 AAEFIRDYLKANGV-ARSVIMGASMGGGMVIMTTLQY-----------PDIVDGIIAVAPAWVES--L--------KGDM 143 (207)
T ss_dssp HHHHHHHHHHHTTC-SSEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESCCSCGG--G--------HHHH
T ss_pred HHHHHHHHHHHcCC-CceEEEEECccHHHHHHHHHhC-----------chhheEEEEeCCccccc--h--------hHHH
Confidence 66666666665543 3999999999999999999854 77899999999863221 1 2233
Q ss_pred hhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 185 RAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 185 ~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
...++|+++++|++|.+++.+..+.+.+.++ +++++++++++|.+..+..+.+.+.+.+++
T Consensus 144 ~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl 204 (207)
T 3bdi_A 144 KKIRQKTLLVWGSKDHVVPIALSKEYASIIS-----GSRLEIVEGSGHPVYIEKPEEFVRITVDFL 204 (207)
T ss_dssp TTCCSCEEEEEETTCTTTTHHHHHHHHHHST-----TCEEEEETTCCSCHHHHSHHHHHHHHHHHH
T ss_pred hhccCCEEEEEECCCCccchHHHHHHHHhcC-----CceEEEeCCCCCCccccCHHHHHHHHHHHH
Confidence 4568999999999999999999999988885 678999999999987554444444444443
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.93 E-value=4.2e-25 Score=171.08 Aligned_cols=184 Identities=21% Similarity=0.177 Sum_probs=126.2
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
..++|||+||++++...|..++..|++.||+|+++|+||||.+.... ...++.+.++++..+
T Consensus 20 ~~~~vvllHG~~~~~~~w~~~~~~l~~~g~~vi~~D~~G~G~S~~~~------------------~~~~~~~~~~dl~~~ 81 (275)
T 1a88_A 20 DGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPS------------------TGHDMDTYAADVAAL 81 (275)
T ss_dssp TSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS------------------SCCSHHHHHHHHHHH
T ss_pred CCceEEEECCCCCchhhHHHHHHHHHHCCceEEEEcCCcCCCCCCCC------------------CCCCHHHHHHHHHHH
Confidence 34689999999999999999999998789999999999887543211 112344555555555
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc------------hhh--------
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS------------RNL-------- 172 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------~~~-------- 172 (257)
++..... +++|+||||||.+++.++.+. .|++++++|++++..+.. ..+
T Consensus 82 l~~l~~~-~~~lvGhS~Gg~ia~~~a~~~----------~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (275)
T 1a88_A 82 TEALDLR-GAVHIGHSTGGGEVARYVARA----------EPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALA 150 (275)
T ss_dssp HHHHTCC-SEEEEEETHHHHHHHHHHHHS----------CTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHHHH
T ss_pred HHHcCCC-ceEEEEeccchHHHHHHHHHh----------CchheEEEEEecCCCcccccCccCcccCCHHHHHHHHHHHh
Confidence 5544333 899999999999999877642 278899999887643210 000
Q ss_pred -------h-----hccc-------c------------------------------chHHHhhhcCCCEEEEccCCCCccc
Q 025121 173 -------R-----NKIE-------G------------------------------SHEAARRAASLPILLTHGLCDDVVP 203 (257)
Q Consensus 173 -------~-----~~~~-------~------------------------------~~~~~~~~~~~P~l~~~G~~D~~v~ 203 (257)
. .... . ........+++|+++++|++|.++|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~ 230 (275)
T 1a88_A 151 ANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVP 230 (275)
T ss_dssp HCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCSSSC
T ss_pred hhHHHHHHhhhccccccccCcccccCHHHHHHHHHHhhhcchHhHHHHHhhhhhcccccccccCCCCEEEEecCCCccCC
Confidence 0 0000 0 0001234578999999999999999
Q ss_pred chhh-HHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 204 YKYG-EKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 204 ~~~~-~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
++.. +.+.+.++ ++++++++++||.++.+..+.+.+-|.+++
T Consensus 231 ~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 273 (275)
T 1a88_A 231 YADAAPKSAELLA-----NATLKSYEGLPHGMLSTHPEVLNPDLLAFV 273 (275)
T ss_dssp STTTHHHHHHHST-----TEEEEEETTCCTTHHHHCHHHHHHHHHHHH
T ss_pred cHHHHHHHHhhCC-----CcEEEEcCCCCccHHHhCHHHHHHHHHHHh
Confidence 8854 44445554 679999999999988665555555554443
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.93 E-value=5.9e-25 Score=170.82 Aligned_cols=205 Identities=20% Similarity=0.220 Sum_probs=140.2
Q ss_pred CCCceEEEEEccCCCCccchHHH---hhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCC----CCCCCC----ch
Q 025121 31 GKHQATIVWLHGLGDNGSSWSQL---LESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGEL----SDDGPE----DW 99 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~~~---~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~----~~~~~~----~~ 99 (257)
+++.|+||++||++++...|... .+.++..|+.|+++|.++||.+..... .| +.+.. ...... ..
T Consensus 44 ~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~~~~~---~~-~~G~g~~~~~~~~~~~~~~~~ 119 (280)
T 3i6y_A 44 GAKVPVLYWLSGLTCSDENFMQKAGAQRLAAELGIAIVAPDTSPRGEGVADDE---GY-DLGQGAGFYVNATQAPWNRHY 119 (280)
T ss_dssp TCCEEEEEEECCTTCCSSHHHHHSCCHHHHHHHTCEEEEECSSCCSTTCCCCS---ST-TSSTTCCTTCBCCSTTGGGTC
T ss_pred CCCccEEEEecCCCCChhHHhhcccHHHHHhhCCeEEEEeCCcccccccCccc---cc-ccccCccccccccCCCccchh
Confidence 56789999999999998888763 344445699999999988876554331 11 11100 000000 01
Q ss_pred hhHHHHHHHHHHHhccCCC-CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh-----
Q 025121 100 EGLDASAAHIANLLSTEPA-DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR----- 173 (257)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----- 173 (257)
.......+.+..+++.... .++++|+||||||.+++.++.+. |+.++++++++|.+.......
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~-----------p~~~~~~v~~s~~~~~~~~~~~~~~~ 188 (280)
T 3i6y_A 120 QMYDYVVNELPELIESMFPVSDKRAIAGHSMGGHGALTIALRN-----------PERYQSVSAFSPINNPVNCPWGQKAF 188 (280)
T ss_dssp BHHHHHHTHHHHHHHHHSSEEEEEEEEEETHHHHHHHHHHHHC-----------TTTCSCEEEESCCCCGGGSHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCeEEEEECHHHHHHHHHHHhC-----------CccccEEEEeCCccccccCchHHHHH
Confidence 1123333455555543322 25999999999999999999964 889999999999765432110
Q ss_pred ---------hccccchHHHhhhc--CCCEEEEccCCCCcccchh-hHHHHHHhhhcCceeeEEEEecCCCCccC--HHHH
Q 025121 174 ---------NKIEGSHEAARRAA--SLPILLTHGLCDDVVPYKY-GEKSANCLSISGFRHLTFKSFEGLGHYTV--PKEM 239 (257)
Q Consensus 174 ---------~~~~~~~~~~~~~~--~~P~l~~~G~~D~~v~~~~-~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~ 239 (257)
.+....+....... .+|+++++|++|.+++.+. ++.+.+.+++.++ +++++++||++|.+. .+.+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~l~~~g~-~~~~~~~~g~~H~~~~~~~~~ 267 (280)
T 3i6y_A 189 TAYLGKDTDTWREYDASLLMRAAKQYVPALVDQGEADNFLAEQLKPEVLEAAASSNNY-PLELRSHEGYDHSYYFIASFI 267 (280)
T ss_dssp HHHHCSCGGGTGGGCHHHHHHHCSSCCCEEEEEETTCTTHHHHTCHHHHHHHHHHTTC-CEEEEEETTCCSSHHHHHHHH
T ss_pred HHhcCCchHHHHhcCHHHHHHhcCCCccEEEEEeCCCccccchhhHHHHHHHHHHcCC-CceEEEeCCCCccHHHHHHhH
Confidence 00111112222333 4899999999999999765 7899999999887 899999999999865 5678
Q ss_pred HHHHHHHHHhcC
Q 025121 240 DEVCNWLTARLG 251 (257)
Q Consensus 240 ~~~~~~l~~~l~ 251 (257)
+++++|+.+.|+
T Consensus 268 ~~~l~~~~~~l~ 279 (280)
T 3i6y_A 268 EDHLRFHSNYLN 279 (280)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHhhcc
Confidence 899999998875
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.5e-25 Score=171.12 Aligned_cols=197 Identities=14% Similarity=0.017 Sum_probs=138.1
Q ss_pred CCceEEEEEccCC---CCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025121 32 KHQATIVWLHGLG---DNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 32 ~~~~~vi~~HG~~---~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
.+.|+||++||.+ ++...|..+++.|++.||.|+++|+|++|.+.... . .+....++...++.
T Consensus 41 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~----~----------~~~~~~d~~~~~~~ 106 (276)
T 3hxk_A 41 YTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVMNKGTNYN----F----------LSQNLEEVQAVFSL 106 (276)
T ss_dssp CCBCEEEEECCSTTTSCCGGGSHHHHHHHHHTTCEEEEEECCCTTSCCCSC----T----------HHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCccccCCchhhHHHHHHHHHCCCEEEEecCccCCCcCCCC----c----------CchHHHHHHHHHHH
Confidence 5679999999943 55667788888888889999999999765422100 0 01112334444444
Q ss_pred HHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhc-----------c
Q 025121 109 IANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNK-----------I 176 (257)
Q Consensus 109 ~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~ 176 (257)
+.+..... .+..+++|+||||||.+++.++.+ ..+.+++++++++|+.......... .
T Consensus 107 l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~----------~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~ 176 (276)
T 3hxk_A 107 IHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNS----------EQIHRPKGVILCYPVTSFTFGWPSDLSHFNFEIENIS 176 (276)
T ss_dssp HHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSS----------CSTTCCSEEEEEEECCBTTSSCSSSSSSSCCCCSCCG
T ss_pred HHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhh----------ccCCCccEEEEecCcccHHhhCCcchhhhhcCchhhh
Confidence 44443332 233599999999999999999974 1378899999998876532221100 0
Q ss_pred ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC-----------------HHHH
Q 025121 177 EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-----------------PKEM 239 (257)
Q Consensus 177 ~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-----------------~~~~ 239 (257)
............+|+++++|++|.++|.+.+..+++.++..+. +++++++++++|.+. .+..
T Consensus 177 ~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~-~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~ 255 (276)
T 3hxk_A 177 EYNISEKVTSSTPPTFIWHTADDEGVPIYNSLKYCDRLSKHQV-PFEAHFFESGPHGVSLANRTTAPSDAYCLPSVHRWV 255 (276)
T ss_dssp GGBTTTTCCTTSCCEEEEEETTCSSSCTHHHHHHHHHHHTTTC-CEEEEEESCCCTTCTTCSTTSCSSSTTCCHHHHTHH
T ss_pred hCChhhccccCCCCEEEEecCCCceeChHHHHHHHHHHHHcCC-CeEEEEECCCCCCccccCccccccccccCchHHHHH
Confidence 0111122345688999999999999999999999999998876 789999999999765 2345
Q ss_pred HHHHHHHHHhcCcC
Q 025121 240 DEVCNWLTARLGLE 253 (257)
Q Consensus 240 ~~~~~~l~~~l~~~ 253 (257)
+.+.+||++..+..
T Consensus 256 ~~~~~wl~~~~~~~ 269 (276)
T 3hxk_A 256 SWASDWLERQIKNL 269 (276)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCcccc
Confidence 78888998876544
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.2e-25 Score=170.15 Aligned_cols=182 Identities=16% Similarity=0.059 Sum_probs=131.7
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCC-CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPL-PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~-~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
..|+|||+||++++...|..++..|.. .||.|+++|+||+|.+.... . .++.+.++++.+
T Consensus 20 ~~~~vv~lhG~~~~~~~~~~~~~~l~~~~g~~v~~~d~~G~G~s~~~~------------------~-~~~~~~~~~~~~ 80 (272)
T 3fsg_A 20 SGTPIIFLHGLSLDKQSTCLFFEPLSNVGQYQRIYLDLPGMGNSDPIS------------------P-STSDNVLETLIE 80 (272)
T ss_dssp CSSEEEEECCTTCCHHHHHHHHTTSTTSTTSEEEEECCTTSTTCCCCS------------------S-CSHHHHHHHHHH
T ss_pred CCCeEEEEeCCCCcHHHHHHHHHHHhccCceEEEEecCCCCCCCCCCC------------------C-CCHHHHHHHHHH
Confidence 356899999999999999999999986 69999999999876432211 0 345566666666
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh--------------hcc-
Q 025121 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR--------------NKI- 176 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--------------~~~- 176 (257)
+++......+++|+||||||.+++.++.+. |+++++++++++......... ..+
T Consensus 81 ~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (272)
T 3fsg_A 81 AIEEIIGARRFILYGHSYGGYLAQAIAFHL-----------KDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVEN 149 (272)
T ss_dssp HHHHHHTTCCEEEEEEEHHHHHHHHHHHHS-----------GGGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCCCTT
T ss_pred HHHHHhCCCcEEEEEeCchHHHHHHHHHhC-----------hHhhheeEEECcccccCccccccccchhhhhhhhhcccC
Confidence 666522234999999999999999999954 889999999987642110000 000
Q ss_pred -----------------------------------------------ccchHHHhhhcCCCEEEEccCCCCcccchhhHH
Q 025121 177 -----------------------------------------------EGSHEAARRAASLPILLTHGLCDDVVPYKYGEK 209 (257)
Q Consensus 177 -----------------------------------------------~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~ 209 (257)
..........+++|+++++|++|.++|.+..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 229 (272)
T 3fsg_A 150 KEYFADFLSMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQLK 229 (272)
T ss_dssp GGGHHHHHHHCSEESHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEEEETTCTTTCSHHHHH
T ss_pred HHHHHHHHHHhccCCCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEEEeCCCCcCCHHHHHH
Confidence 000000224568999999999999999999888
Q ss_pred HHHHhhhcCceeeEEEEecCCCCccCHHHH----HHHHHHHHHh
Q 025121 210 SANCLSISGFRHLTFKSFEGLGHYTVPKEM----DEVCNWLTAR 249 (257)
Q Consensus 210 ~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~----~~~~~~l~~~ 249 (257)
+.+.++ ++++++++++||.+..+.. +.+.+||.+.
T Consensus 230 ~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 268 (272)
T 3fsg_A 230 LINHNE-----NGEIVLLNRTGHNLMIDQREAVGFHFDLFLDEL 268 (272)
T ss_dssp HHTTCT-----TEEEEEESSCCSSHHHHTHHHHHHHHHHHHHHH
T ss_pred HHHhcC-----CCeEEEecCCCCCchhcCHHHHHHHHHHHHHHh
Confidence 888775 6799999999999875544 4555666554
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4.1e-25 Score=168.20 Aligned_cols=189 Identities=14% Similarity=0.115 Sum_probs=134.8
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
..++|||+||++++...|..+++.|++.||.|+++|+|++|.+..... .. ......+.+++..+.+.
T Consensus 21 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~-----~~--------~~~~~~~~~d~~~~i~~ 87 (251)
T 3dkr_A 21 TDTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDI-----LT--------KGNPDIWWAESSAAVAH 87 (251)
T ss_dssp SSEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCTTCSSSCTHHH-----HH--------HCCHHHHHHHHHHHHHH
T ss_pred CCceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecCCCCCCCCChhhh-----cC--------cccHHHHHHHHHHHHHH
Confidence 457999999999999999999999988899999999998764321100 00 00123333444444455
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhh------------------
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN------------------ 174 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~------------------ 174 (257)
+... ..+++|+|||+||.+++.++.+. ++.+++++++++..........
T Consensus 88 l~~~--~~~~~l~G~S~Gg~~a~~~a~~~-----------p~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (251)
T 3dkr_A 88 MTAK--YAKVFVFGLSLGGIFAMKALETL-----------PGITAGGVFSSPILPGKHHLVPGFLKYAEYMNRLAGKSDE 154 (251)
T ss_dssp HHTT--CSEEEEEESHHHHHHHHHHHHHC-----------SSCCEEEESSCCCCTTCBCHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHh--cCCeEEEEechHHHHHHHHHHhC-----------ccceeeEEEecchhhccchhhHHHHHHHHHHHhhcccCcc
Confidence 5444 44999999999999999999964 7889999988887653211000
Q ss_pred ----------ccc------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHH-
Q 025121 175 ----------KIE------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPK- 237 (257)
Q Consensus 175 ----------~~~------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~- 237 (257)
... .........+++|+++++|++|.++|.+.++.+.+.++.. . +++++++++++|.+..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~gH~~~~~~ 232 (251)
T 3dkr_A 155 STQILAYLPGQLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINA-A-RVDFHWYDDAKHVITVNS 232 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTC-S-CEEEEEETTCCSCTTTST
T ss_pred hhhHHhhhHHHHHHHHHHHHHHhccccccCCCEEEEecCCCcccChHHHHHHHHHhcCC-C-CceEEEeCCCCccccccc
Confidence 000 0011234556899999999999999999999999999862 1 67999999999998633
Q ss_pred ----HHHHHHHHHHHh
Q 025121 238 ----EMDEVCNWLTAR 249 (257)
Q Consensus 238 ----~~~~~~~~l~~~ 249 (257)
..+.+.+||.+.
T Consensus 233 ~~~~~~~~i~~fl~~~ 248 (251)
T 3dkr_A 233 AHHALEEDVIAFMQQE 248 (251)
T ss_dssp THHHHHHHHHHHHHTT
T ss_pred chhHHHHHHHHHHHhh
Confidence 356677777654
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.93 E-value=1e-24 Score=170.15 Aligned_cols=179 Identities=15% Similarity=0.091 Sum_probs=128.5
Q ss_pred CceEEEEEccCCCCcc-chHHHhhcCCCCceEEEccCCCCCCcccC-CCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGS-SWSQLLESLPLPNIKWICPTAPTRPVAIL-GGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~~~g~~~~-~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
..|+|||+||++++.. .|..++..|+ .+|+|+++|+||||.+.. .. .....++.+.++++.
T Consensus 24 ~~~~vvllHG~~~~~~~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~~----------------~~~~~~~~~~a~dl~ 86 (286)
T 2yys_A 24 EGPALFVLHGGPGGNAYVLREGLQDYL-EGFRVVYFDQRGSGRSLELPQ----------------DPRLFTVDALVEDTL 86 (286)
T ss_dssp TSCEEEEECCTTTCCSHHHHHHHGGGC-TTSEEEEECCTTSTTSCCCCS----------------CGGGCCHHHHHHHHH
T ss_pred CCCEEEEECCCCCcchhHHHHHHHHhc-CCCEEEEECCCCCCCCCCCcc----------------CcccCcHHHHHHHHH
Confidence 4578999999999999 8999999996 689999999998875432 10 000234566667777
Q ss_pred HHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch---hh---------------
Q 025121 111 NLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR---NL--------------- 172 (257)
Q Consensus 111 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~--------------- 172 (257)
.+++..... +++|+||||||.+++.++.+. |+ ++++|++++...... ..
T Consensus 87 ~ll~~l~~~-~~~lvGhS~Gg~ia~~~a~~~-----------p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (286)
T 2yys_A 87 LLAEALGVE-RFGLLAHGFGAVVALEVLRRF-----------PQ-AEGAILLAPWVNFPWLAARLAEAAGLAPLPDPEEN 153 (286)
T ss_dssp HHHHHTTCC-SEEEEEETTHHHHHHHHHHHC-----------TT-EEEEEEESCCCBHHHHHHHHHHHTTCCCCSCHHHH
T ss_pred HHHHHhCCC-cEEEEEeCHHHHHHHHHHHhC-----------cc-hheEEEeCCccCcHHHHHHHHHHhccccchhHHHH
Confidence 777665443 899999999999999999964 88 999999887541110 00
Q ss_pred -hhc---------------c---------------cc------------------chHHHhhhcCCCEEEEccCCCCccc
Q 025121 173 -RNK---------------I---------------EG------------------SHEAARRAASLPILLTHGLCDDVVP 203 (257)
Q Consensus 173 -~~~---------------~---------------~~------------------~~~~~~~~~~~P~l~~~G~~D~~v~ 203 (257)
... . .. ........+++|+++++|++|.+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~ 233 (286)
T 2yys_A 154 LKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLDYTPYLTPERRPLYVLVGERDGTSY 233 (286)
T ss_dssp HHHHHHHSCHHHHHHHHHCSSHHHHHHHHHHHHHTTCCCCSHHHHHHHHTTGGGCBCGGGCCCCSSCEEEEEETTCTTTT
T ss_pred HHHHhccCChHHHHHhhhccCCccccChHHHHHHHhhccccccchhhcccccccCChhhhhhhcCCCEEEEEeCCCCcCC
Confidence 000 0 00 0000123467899999999999999
Q ss_pred chhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHH----HHHHHHHHH
Q 025121 204 YKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEM----DEVCNWLTA 248 (257)
Q Consensus 204 ~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~----~~~~~~l~~ 248 (257)
.+ ++.+.+ ++ +.++++++++||..+.+.. +.+.+|+.+
T Consensus 234 ~~-~~~~~~-~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 275 (286)
T 2yys_A 234 PY-AEEVAS-RL-----RAPIRVLPEAGHYLWIDAPEAFEEAFKEALAA 275 (286)
T ss_dssp TT-HHHHHH-HH-----TCCEEEETTCCSSHHHHCHHHHHHHHHHHHHT
T ss_pred Hh-HHHHHh-CC-----CCCEEEeCCCCCCcChhhHHHHHHHHHHHHHh
Confidence 99 888888 86 5689999999999875544 445555544
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=9.6e-25 Score=168.92 Aligned_cols=184 Identities=16% Similarity=0.194 Sum_probs=131.2
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
.+|+|||+||++++...|..+++.|+ .+|+|+++|+||||.+..... ......++.+.++++.++
T Consensus 19 g~~~vvllHG~~~~~~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~~--------------~~~~~~~~~~~a~dl~~~ 83 (271)
T 1wom_A 19 GKASIMFAPGFGCDQSVWNAVAPAFE-EDHRVILFDYVGSGHSDLRAY--------------DLNRYQTLDGYAQDVLDV 83 (271)
T ss_dssp CSSEEEEECCTTCCGGGGTTTGGGGT-TTSEEEECCCSCCSSSCCTTC--------------CTTGGGSHHHHHHHHHHH
T ss_pred CCCcEEEEcCCCCchhhHHHHHHHHH-hcCeEEEECCCCCCCCCCCcc--------------cccccccHHHHHHHHHHH
Confidence 44789999999999999999999997 479999999999875532110 001123556667777777
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch---------------hhh----
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR---------------NLR---- 173 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------------~~~---- 173 (257)
++..... +++|+||||||.+++.++.+. |++++++|++++...... .+.
T Consensus 84 l~~l~~~-~~~lvGhS~GG~va~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (271)
T 1wom_A 84 CEALDLK-ETVFVGHSVGALIGMLASIRR-----------PELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMME 151 (271)
T ss_dssp HHHTTCS-CEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHH
T ss_pred HHHcCCC-CeEEEEeCHHHHHHHHHHHhC-----------HHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHh
Confidence 7765444 899999999999999999964 889999998876321000 000
Q ss_pred ----hc--------cc--c------------------------------chHHHhhhcCCCEEEEccCCCCcccchhhHH
Q 025121 174 ----NK--------IE--G------------------------------SHEAARRAASLPILLTHGLCDDVVPYKYGEK 209 (257)
Q Consensus 174 ----~~--------~~--~------------------------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~ 209 (257)
.+ .. . ........+++|+++++|++|.++|.+.++.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~ 231 (271)
T 1wom_A 152 KNYIGWATVFAATVLNQPDRPEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKY 231 (271)
T ss_dssp HCHHHHHHHHHHHHHCCTTCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHTTCCSCEEEEEEETCSSSCHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCCCchHHHHHHHHHHhcCCcHHHHHHHHHHhCcchHHhccccCCCEEEEEcCCCCcCCHHHHHH
Confidence 00 00 0 0001224568999999999999999988888
Q ss_pred HHHHhhhcCceeeEEEEecCCCCccCHHHH----HHHHHHHHH
Q 025121 210 SANCLSISGFRHLTFKSFEGLGHYTVPKEM----DEVCNWLTA 248 (257)
Q Consensus 210 ~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~----~~~~~~l~~ 248 (257)
+.+.++ +.++++++++||.++.+.. +.+.+|+.+
T Consensus 232 ~~~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 269 (271)
T 1wom_A 232 MHQHLP-----YSSLKQMEARGHCPHMSHPDETIQLIGDYLKA 269 (271)
T ss_dssp HHHHSS-----SEEEEEEEEESSCHHHHCHHHHHHHHHHHHHH
T ss_pred HHHHCC-----CCEEEEeCCCCcCccccCHHHHHHHHHHHHHh
Confidence 888876 6799999999999875544 445555544
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-24 Score=161.28 Aligned_cols=175 Identities=17% Similarity=0.100 Sum_probs=124.5
Q ss_pred CCCceEEEEEccC-----CCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025121 31 GKHQATIVWLHGL-----GDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 31 ~~~~~~vi~~HG~-----~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
.++.|+||++||. ..+...|..+++.|++.||.|+++|+|++|.+...- .. .....++
T Consensus 28 ~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~----------------~~-~~~~~~d 90 (208)
T 3trd_A 28 IEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQGRY----------------DN-GVGEVED 90 (208)
T ss_dssp CCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCC----------------CT-TTHHHHH
T ss_pred CCCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCCCCCCCc----------------cc-hHHHHHH
Confidence 3478999999993 333444778889998889999999999775432110 11 1122233
Q ss_pred HHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhh
Q 025121 106 AAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARR 185 (257)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (257)
+..+.+.+.......+++++|||+||.+++.++. . + ++++++++++....... ....
T Consensus 91 ~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~-~-----------~-~v~~~v~~~~~~~~~~~----------~~~~ 147 (208)
T 3trd_A 91 LKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVAY-D-----------Q-KVAQLISVAPPVFYEGF----------ASLT 147 (208)
T ss_dssp HHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHHH-H-----------S-CCSEEEEESCCTTSGGG----------TTCC
T ss_pred HHHHHHHHHHhCCCCeEEEEEeCHHHHHHHHHhc-c-----------C-CccEEEEeccccccCCc----------hhhh
Confidence 3333333333333359999999999999999994 2 4 89999999987733221 1123
Q ss_pred hcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 186 AASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 186 ~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
..++|+++++|++|.++|.+.++++.+.++. +++++++++++|.+..+. +.+.+++.+++
T Consensus 148 ~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~~~H~~~~~~-~~~~~~i~~fl 207 (208)
T 3trd_A 148 QMASPWLIVQGDQDEVVPFEQVKAFVNQISS----PVEFVVMSGASHFFHGRL-IELRELLVRNL 207 (208)
T ss_dssp SCCSCEEEEEETTCSSSCHHHHHHHHHHSSS----CCEEEEETTCCSSCTTCH-HHHHHHHHHHH
T ss_pred hcCCCEEEEECCCCCCCCHHHHHHHHHHccC----ceEEEEeCCCCCcccccH-HHHHHHHHHHh
Confidence 4589999999999999999999999888874 379999999999988554 66666666554
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=99.93 E-value=9.1e-25 Score=172.36 Aligned_cols=181 Identities=18% Similarity=0.150 Sum_probs=131.2
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.|+||++||++++...|..+++.|+. +|.|+++|.||+|.+... ....++.+.++++..++
T Consensus 68 ~p~vv~lhG~~~~~~~~~~~~~~L~~-~~~v~~~D~~G~G~S~~~------------------~~~~~~~~~~~dl~~~l 128 (314)
T 3kxp_A 68 GPLMLFFHGITSNSAVFEPLMIRLSD-RFTTIAVDQRGHGLSDKP------------------ETGYEANDYADDIAGLI 128 (314)
T ss_dssp SSEEEEECCTTCCGGGGHHHHHTTTT-TSEEEEECCTTSTTSCCC------------------SSCCSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHc-CCeEEEEeCCCcCCCCCC------------------CCCCCHHHHHHHHHHHH
Confidence 67999999999999999999999985 799999999987654311 11223344455555555
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc-----------------
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI----------------- 176 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------------- 176 (257)
+.... ++++|+|||+||.+++.++.+. ++++++++++++............
T Consensus 129 ~~l~~-~~v~lvG~S~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (314)
T 3kxp_A 129 RTLAR-GHAILVGHSLGARNSVTAAAKY-----------PDLVRSVVAIDFTPYIETEALDALEARVNAGSQLFEDIKAV 196 (314)
T ss_dssp HHHTS-SCEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESCCTTCCHHHHHHHHHHTTTTCSCBSSHHHH
T ss_pred HHhCC-CCcEEEEECchHHHHHHHHHhC-----------hhheeEEEEeCCCCCCCcchhhHHHHHhhhchhhhcCHHHH
Confidence 44333 3999999999999999999964 789999999977543221100000
Q ss_pred --------cc---------------------------------------chHHHhhhcCCCEEEEccCCCCcccchhhHH
Q 025121 177 --------EG---------------------------------------SHEAARRAASLPILLTHGLCDDVVPYKYGEK 209 (257)
Q Consensus 177 --------~~---------------------------------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~ 209 (257)
.. ........+++|+|+++|++|.++|.+.++.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~~~~~~~~~ 276 (314)
T 3kxp_A 197 EAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTKPVLIVRGESSKLVSAAALAK 276 (314)
T ss_dssp HHHHHHHSTTSCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHHCCSCEEEEEETTCSSSCHHHHHH
T ss_pred HHHHHhhcccCchHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhcCCCCEEEEecCCCccCCHHHHHH
Confidence 00 1112234679999999999999999999999
Q ss_pred HHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 210 SANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 210 ~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
+.+.++ ++++++++|+||.+..+..+.+.+.+.+++
T Consensus 277 ~~~~~~-----~~~~~~~~g~gH~~~~e~~~~~~~~i~~fl 312 (314)
T 3kxp_A 277 TSRLRP-----DLPVVVVPGADHYVNEVSPEITLKAITNFI 312 (314)
T ss_dssp HHHHCT-----TSCEEEETTCCSCHHHHCHHHHHHHHHHHH
T ss_pred HHHhCC-----CceEEEcCCCCCcchhhCHHHHHHHHHHHH
Confidence 998886 568999999999987665555555555444
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=99.93 E-value=3.5e-25 Score=172.79 Aligned_cols=190 Identities=17% Similarity=0.139 Sum_probs=134.7
Q ss_pred EEeCCCCCCceEEEEEccCCCCccchH-HHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHH
Q 025121 25 HVVRPKGKHQATIVWLHGLGDNGSSWS-QLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLD 103 (257)
Q Consensus 25 ~~~~~~~~~~~~vi~~HG~~~~~~~~~-~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 103 (257)
+.+...+ ..|+|||+||++++...|. .++..|...||.|+++|+||+|.+.... ..++.
T Consensus 35 l~y~~~g-~~~~vv~lHG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~~-------------------~~~~~ 94 (293)
T 3hss_A 35 LAYDDNG-TGDPVVFIAGRGGAGRTWHPHQVPAFLAAGYRCITFDNRGIGATENAE-------------------GFTTQ 94 (293)
T ss_dssp EEEEEEC-SSEEEEEECCTTCCGGGGTTTTHHHHHHTTEEEEEECCTTSGGGTTCC-------------------SCCHH
T ss_pred EEEEEcC-CCCEEEEECCCCCchhhcchhhhhhHhhcCCeEEEEccCCCCCCCCcc-------------------cCCHH
Confidence 3333333 4678999999999999998 6777776689999999999876432110 12344
Q ss_pred HHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhc--------
Q 025121 104 ASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNK-------- 175 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-------- 175 (257)
+.++++..+++..... +++|+|||+||.+++.++.+. |+++++++++++...........
T Consensus 95 ~~~~~~~~~l~~l~~~-~~~lvGhS~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 162 (293)
T 3hss_A 95 TMVADTAALIETLDIA-PARVVGVSMGAFIAQELMVVA-----------PELVSSAVLMATRGRLDRARQFFNKAEAELY 162 (293)
T ss_dssp HHHHHHHHHHHHHTCC-SEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESCCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCC-cEEEEeeCccHHHHHHHHHHC-----------hHHHHhhheecccccCChhhhHHHHHHHHHH
Confidence 4555555555544333 899999999999999999964 88999999998864332100000
Q ss_pred -------------------c-------------------------------------ccchHHHhhhcCCCEEEEccCCC
Q 025121 176 -------------------I-------------------------------------EGSHEAARRAASLPILLTHGLCD 199 (257)
Q Consensus 176 -------------------~-------------------------------------~~~~~~~~~~~~~P~l~~~G~~D 199 (257)
. ..........+++|+++++|++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D 242 (293)
T 3hss_A 163 DSGVQLPPTYDARARLLENFSRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADD 242 (293)
T ss_dssp HHTCCCCHHHHHHHHHHHHSCHHHHTCHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTC
T ss_pred hhcccchhhHHHHHHHhhhcccccccccccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCC
Confidence 0 00001123557899999999999
Q ss_pred CcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 200 DVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 200 ~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
.++|.+.++.+.+.++ ++++++++++||.+..+..+.+.+.|.+++.
T Consensus 243 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 289 (293)
T 3hss_A 243 VVTPPYLGREVADALP-----NGRYLQIPDAGHLGFFERPEAVNTAMLKFFA 289 (293)
T ss_dssp SSSCHHHHHHHHHHST-----TEEEEEETTCCTTHHHHSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHCC-----CceEEEeCCCcchHhhhCHHHHHHHHHHHHH
Confidence 9999999999998886 6799999999999886655555555555443
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-24 Score=164.36 Aligned_cols=179 Identities=20% Similarity=0.177 Sum_probs=134.4
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
+++|+|||+||++++...|. ++..|. +||.|+++|+|++|.+.. ....++.+.++++.+
T Consensus 14 ~~~~~vv~~hG~~~~~~~~~-~~~~l~-~g~~v~~~d~~g~g~s~~-------------------~~~~~~~~~~~~~~~ 72 (245)
T 3e0x_A 14 KSPNTLLFVHGSGCNLKIFG-ELEKYL-EDYNCILLDLKGHGESKG-------------------QCPSTVYGYIDNVAN 72 (245)
T ss_dssp TCSCEEEEECCTTCCGGGGT-TGGGGC-TTSEEEEECCTTSTTCCS-------------------CCCSSHHHHHHHHHH
T ss_pred CCCCEEEEEeCCcccHHHHH-HHHHHH-hCCEEEEecCCCCCCCCC-------------------CCCcCHHHHHHHHHH
Confidence 35789999999999999999 888887 899999999998764421 112345666677777
Q ss_pred Hh------ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh---hcc------
Q 025121 112 LL------STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR---NKI------ 176 (257)
Q Consensus 112 ~~------~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~------ 176 (257)
++ +... +++|+|||+||.+++.++.+ .+++ +++++++++......... ..+
T Consensus 73 ~~~~~~~~~~~~---~~~l~G~S~Gg~~a~~~a~~----------~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 138 (245)
T 3e0x_A 73 FITNSEVTKHQK---NITLIGYSMGGAIVLGVALK----------KLPN-VRKVVSLSGGARFDKLDKDFMEKIYHNQLD 138 (245)
T ss_dssp HHHHCTTTTTCS---CEEEEEETHHHHHHHHHHTT----------TCTT-EEEEEEESCCSBCTTSCHHHHHHHHTTCCC
T ss_pred HHHhhhhHhhcC---ceEEEEeChhHHHHHHHHHH----------hCcc-ccEEEEecCCCccccccHHHHHHHHHHHHH
Confidence 77 4443 99999999999999999985 0377 999999988765411000 000
Q ss_pred -----------------------c---------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcC
Q 025121 177 -----------------------E---------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISG 218 (257)
Q Consensus 177 -----------------------~---------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~ 218 (257)
. .........+++|+++++|++|.++|.+..+.+.+.++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--- 215 (245)
T 3e0x_A 139 NNYLLECIGGIDNPLSEKYFETLEKDPDIMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEVE--- 215 (245)
T ss_dssp HHHHHHHHTCSCSHHHHHHHTTSCSSHHHHHHHHHHHHHCBCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSS---
T ss_pred hhcCcccccccchHHHHHHHHHHhcCcHHHHHHHHHhccccHHHHHHhCCCCEEEEEeCCCCCCCHHHHHHHHHHcC---
Confidence 0 00011235678999999999999999999999998886
Q ss_pred ceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 219 FRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 219 ~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
++++++++++||.+..+..+.+.+.+.+++
T Consensus 216 --~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 245 (245)
T 3e0x_A 216 --NSELKIFETGKHFLLVVNAKGVAEEIKNFI 245 (245)
T ss_dssp --SEEEEEESSCGGGHHHHTHHHHHHHHHTTC
T ss_pred --CceEEEeCCCCcceEEecHHHHHHHHHhhC
Confidence 679999999999988777777777776653
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-24 Score=169.03 Aligned_cols=187 Identities=17% Similarity=0.149 Sum_probs=135.7
Q ss_pred CceEEEEEccCCCCccchHH-HhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQ-LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~-~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
..|+|||+||++++...|.. +++.|++.||+|+++|+||+|.+.... ......++.+.++++..
T Consensus 22 ~~~~vvllHG~~~~~~~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~~---------------~~~~~~~~~~~a~dl~~ 86 (298)
T 1q0r_A 22 ADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRD---------------FAAHPYGFGELAADAVA 86 (298)
T ss_dssp TSCEEEEECCTTCCGGGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCC---------------TTTSCCCHHHHHHHHHH
T ss_pred CCCeEEEEcCCCCCccchHHHHHHHHHhCCCEEEeeCCCCCCCCCCCC---------------CCcCCcCHHHHHHHHHH
Confidence 45689999999999999987 558888789999999999887543200 00112345666667777
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCC-CC---------------------c
Q 025121 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWL-PG---------------------S 169 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~---------------------~ 169 (257)
+++..... +++|+||||||.+++.++.++ |++++++|++++.. .. .
T Consensus 87 ~l~~l~~~-~~~lvGhS~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (298)
T 1q0r_A 87 VLDGWGVD-RAHVVGLSMGATITQVIALDH-----------HDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLPGP 154 (298)
T ss_dssp HHHHTTCS-SEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSCCC
T ss_pred HHHHhCCC-ceEEEEeCcHHHHHHHHHHhC-----------chhhheeEEecccCCCcccccchhhhhhhhhhhcccccc
Confidence 77665444 899999999999999999964 77888888776432 10 0
Q ss_pred --hh---hhh-------------------------c--c-------------------ccc------------hHHH-hh
Q 025121 170 --RN---LRN-------------------------K--I-------------------EGS------------HEAA-RR 185 (257)
Q Consensus 170 --~~---~~~-------------------------~--~-------------------~~~------------~~~~-~~ 185 (257)
.. +.. . . ... .... ..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 234 (298)
T 1q0r_A 155 QQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAELR 234 (298)
T ss_dssp CHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGGGGGGG
T ss_pred cHHHHHHHhccCcccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccCCccchhhhhhhhhcCccccccccc
Confidence 00 000 0 0 000 0112 45
Q ss_pred hcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 186 AASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 186 ~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
.+++|+|+++|++|.++|.+.++.+.+.++ +.++++++++||....+..+.+.+||.+...
T Consensus 235 ~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p-----~~~~~~i~~~gHe~p~~~~~~i~~fl~~~~~ 295 (298)
T 1q0r_A 235 EVTVPTLVIQAEHDPIAPAPHGKHLAGLIP-----TARLAEIPGMGHALPSSVHGPLAEVILAHTR 295 (298)
T ss_dssp GCCSCEEEEEETTCSSSCTTHHHHHHHTST-----TEEEEEETTCCSSCCGGGHHHHHHHHHHHHH
T ss_pred ccCCCEEEEEeCCCccCCHHHHHHHHHhCC-----CCEEEEcCCCCCCCcHHHHHHHHHHHHHHhh
Confidence 678999999999999999999888888876 6799999999997777788999999987653
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-24 Score=168.35 Aligned_cols=183 Identities=13% Similarity=0.127 Sum_probs=138.5
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
+..|+||++||++++...|..+++.|...||.|+++|+||+|.+.... .....++.+.++++..
T Consensus 24 ~~~~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~----------------~~~~~~~~~~~~~~~~ 87 (286)
T 3qit_A 24 PEHPVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFGHGRSSHLE----------------MVTSYSSLTFLAQIDR 87 (286)
T ss_dssp TTSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS----------------SGGGCSHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcccchHHHHHHHhhhcCeEEEEECCCCCCCCCCCC----------------CCCCcCHHHHHHHHHH
Confidence 456799999999999999999999998889999999999876443211 1123345666777777
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhh-------------------
Q 025121 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL------------------- 172 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~------------------- 172 (257)
+++..... +++++|||+||.+++.++.+. |+++++++++++..+.....
T Consensus 88 ~~~~~~~~-~~~l~G~S~Gg~~a~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (286)
T 3qit_A 88 VIQELPDQ-PLLLVGHSMGAMLATAIASVR-----------PKKIKELILVELPLPAEESKKESAVNQLTTCLDYLSSTP 155 (286)
T ss_dssp HHHHSCSS-CEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESCCCCCCC---CCHHHHHHHHHHHHTCCC
T ss_pred HHHhcCCC-CEEEEEeCHHHHHHHHHHHhC-----------hhhccEEEEecCCCCCccccchhhhHHHHHHHHHHhccc
Confidence 77665443 999999999999999999964 88999999998765432111
Q ss_pred ----h-hc-------------------------------------------------------cccchHHHhhhcCCCEE
Q 025121 173 ----R-NK-------------------------------------------------------IEGSHEAARRAASLPIL 192 (257)
Q Consensus 173 ----~-~~-------------------------------------------------------~~~~~~~~~~~~~~P~l 192 (257)
. .. ...........+++|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l 235 (286)
T 3qit_A 156 QHPIFPDVATAASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQYLEMLKSIQVPTT 235 (286)
T ss_dssp CCCCBSSHHHHHHHHHHHSTTSCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCTTHHHHHHHHHHHCCSCEE
T ss_pred cccccccHHHHHHHhhcCCcccCHHHHHHHhhccccccccceeeeechhhhccccccccccccchhHHHHHHhccCCCeE
Confidence 0 00 00000112356799999
Q ss_pred EEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHH
Q 025121 193 LTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTA 248 (257)
Q Consensus 193 ~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~ 248 (257)
+++|++|.++|.+..+.+.+.++ ++++++++| ||.+..+..+.+.+.|.+
T Consensus 236 ~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~g-gH~~~~e~p~~~~~~i~~ 285 (286)
T 3qit_A 236 LVYGDSSKLNRPEDLQQQKMTMT-----QAKRVFLSG-GHNLHIDAAAALASLILT 285 (286)
T ss_dssp EEEETTCCSSCHHHHHHHHHHST-----TSEEEEESS-SSCHHHHTHHHHHHHHHC
T ss_pred EEEeCCCcccCHHHHHHHHHHCC-----CCeEEEeeC-CchHhhhChHHHHHHhhc
Confidence 99999999999999999888886 568999999 999998888888887754
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.4e-25 Score=173.87 Aligned_cols=184 Identities=16% Similarity=0.154 Sum_probs=138.1
Q ss_pred eEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHH
Q 025121 24 THVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLD 103 (257)
Q Consensus 24 ~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 103 (257)
.++++....+.|+|||+||++++...|..+++.|++.||.|+++|++++|.+.. ....++.
T Consensus 86 ~~~~p~~~~~~p~vv~~HG~~~~~~~~~~~~~~la~~G~~vv~~d~~g~g~s~~-------------------~~~~d~~ 146 (306)
T 3vis_A 86 TIYYPRENNTYGAIAISPGYTGTQSSIAWLGERIASHGFVVIAIDTNTTLDQPD-------------------SRARQLN 146 (306)
T ss_dssp EEEEESSCSCEEEEEEECCTTCCHHHHHHHHHHHHTTTEEEEEECCSSTTCCHH-------------------HHHHHHH
T ss_pred EEEeeCCCCCCCEEEEeCCCcCCHHHHHHHHHHHHhCCCEEEEecCCCCCCCcc-------------------hHHHHHH
Confidence 344444445789999999999999999999999998999999999886532110 0112333
Q ss_pred HHHHHHHHH----hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccc
Q 025121 104 ASAAHIANL----LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGS 179 (257)
Q Consensus 104 ~~~~~~~~~----~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 179 (257)
..++++.+. +......++++++|||+||.+++.++.+. + .++++++++++.....
T Consensus 147 ~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~-----------p-~v~~~v~~~~~~~~~~--------- 205 (306)
T 3vis_A 147 AALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQR-----------P-DLKAAIPLTPWHLNKS--------- 205 (306)
T ss_dssp HHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHC-----------T-TCSEEEEESCCCSCCC---------
T ss_pred HHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhC-----------C-CeeEEEEeccccCccc---------
Confidence 333333332 11122335999999999999999999853 4 4999999998765311
Q ss_pred hHHHhhhcCCCEEEEccCCCCcccch-hhHHHHHHhhhcCceeeEEEEecCCCCccC----HHHHHHHHHHHHHhcCcC
Q 025121 180 HEAARRAASLPILLTHGLCDDVVPYK-YGEKSANCLSISGFRHLTFKSFEGLGHYTV----PKEMDEVCNWLTARLGLE 253 (257)
Q Consensus 180 ~~~~~~~~~~P~l~~~G~~D~~v~~~-~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~----~~~~~~~~~~l~~~l~~~ 253 (257)
...+++|+++++|++|.++|.+ ..+.+++.++..+ +++++++++++|.+. .+..+.+.+||.+.+...
T Consensus 206 ----~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~~--~~~~~~~~g~gH~~~~~~~~~~~~~i~~fl~~~l~~~ 278 (306)
T 3vis_A 206 ----WRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPSPT--DKAYLELDGASHFAPNITNKTIGMYSVAWLKRFVDED 278 (306)
T ss_dssp ----CTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCTTS--CEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHHHSCC
T ss_pred ----cccCCCCEEEEecCCCcccCcchhHHHHHHHhccCC--CceEEEECCCCccchhhchhHHHHHHHHHHHHHccCc
Confidence 2345799999999999999998 6899999998754 578999999999886 346788999999987654
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-24 Score=168.12 Aligned_cols=203 Identities=13% Similarity=0.023 Sum_probs=132.8
Q ss_pred CCCceEEEEEcc---CCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025121 31 GKHQATIVWLHG---LGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 31 ~~~~~~vi~~HG---~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
..+.|+||++|| .+++...|..+++.|++.||.|+++|+|++|... . ..+....++.+.+.
T Consensus 32 ~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~--~--------------~~~~~~~d~~~~~~ 95 (277)
T 3bxp_A 32 AVDYPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQLIVGDQ--S--------------VYPWALQQLGATID 95 (277)
T ss_dssp CCCEEEEEEECCSTTTSCCCTTHHHHHHHHHHTTCEEEEEECCCSTTTC--C--------------CTTHHHHHHHHHHH
T ss_pred CCCccEEEEECCCccccCCCccchHHHHHHHHCCCEEEEEecccCCCCC--c--------------cCchHHHHHHHHHH
Confidence 457899999999 6677778889999998889999999999765100 0 11122334444444
Q ss_pred HHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCC---CCCCCcccccceEEEeccCCCCchhh------h-hc-
Q 025121 108 HIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRY---GNGIPYYVNLRAVVGLSGWLPGSRNL------R-NK- 175 (257)
Q Consensus 108 ~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~------~-~~- 175 (257)
.+.+..... ....+++|+|||+||.+++.++.+.+.... ......+.+++++++++|+......+ . ..
T Consensus 96 ~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~ 175 (277)
T 3bxp_A 96 WITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVIDLTAGFPTTSAARNQIT 175 (277)
T ss_dssp HHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESCCCBTTSSSSSSHHHHHHHC
T ss_pred HHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCCcccCCCCCCCccccchhcc
Confidence 444443322 223489999999999999999986311000 00000257799999999876432111 1 00
Q ss_pred ---cccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC-----------------
Q 025121 176 ---IEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV----------------- 235 (257)
Q Consensus 176 ---~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~----------------- 235 (257)
.............+|+|+++|++|.++|++.++.+++.+++.+. +++++++++++|.+.
T Consensus 176 ~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~-~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~ 254 (277)
T 3bxp_A 176 TDARLWAAQRLVTPASKPAFVWQTATDESVPPINSLKYVQAMLQHQV-ATAYHLFGSGIHGLALANHVTQKPGKDKYLND 254 (277)
T ss_dssp SCGGGSBGGGGCCTTSCCEEEEECTTCCCSCTHHHHHHHHHHHHTTC-CEEEEECCCC----------------CHHHHH
T ss_pred chhhhcCHhhccccCCCCEEEEeeCCCCccChHHHHHHHHHHHHCCC-eEEEEEeCCCCcccccccccccCccccccccc
Confidence 01111223344578999999999999999999999999998876 789999999999653
Q ss_pred --HHHHHHHHHHHHHhc
Q 025121 236 --PKEMDEVCNWLTARL 250 (257)
Q Consensus 236 --~~~~~~~~~~l~~~l 250 (257)
.+..+.+.+||.+..
T Consensus 255 ~~~~~~~~~~~fl~~~~ 271 (277)
T 3bxp_A 255 QAAIWPQLALRWLQEQG 271 (277)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHhcc
Confidence 122577778887653
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.2e-25 Score=160.47 Aligned_cols=170 Identities=14% Similarity=0.060 Sum_probs=123.8
Q ss_pred CCceEEEEEccCCCCccchH--HHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWS--QLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~--~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
+++|+||++||++++...|. .+++.|++.||.|+++|+|++|.+... .....+.+.+..+
T Consensus 2 ~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~------------------~~~~~~~~~~~~~ 63 (176)
T 2qjw_A 2 MSRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDLDARRDL------------------GQLGDVRGRLQRL 63 (176)
T ss_dssp CSSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCCCHHHHTCGGG------------------CTTCCHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCC------------------CCCCCHHHHHHHH
Confidence 46789999999999887655 788888878999999999876543210 0122334455555
Q ss_pred HHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhhhcCC
Q 025121 110 ANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASL 189 (257)
Q Consensus 110 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (257)
.+.+++.....+++++|||+||.+++.++.+. + ++++++++++........ ....++
T Consensus 64 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-----------~--~~~~v~~~~~~~~~~~~~----------~~~~~~ 120 (176)
T 2qjw_A 64 LEIARAATEKGPVVLAGSSLGSYIAAQVSLQV-----------P--TRALFLMVPPTKMGPLPA----------LDAAAV 120 (176)
T ss_dssp HHHHHHHHTTSCEEEEEETHHHHHHHHHHTTS-----------C--CSEEEEESCCSCBTTBCC----------CCCCSS
T ss_pred HHHHHhcCCCCCEEEEEECHHHHHHHHHHHhc-----------C--hhheEEECCcCCccccCc----------ccccCC
Confidence 55555443335999999999999999999853 4 999999998765432111 345689
Q ss_pred CEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 190 PILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 190 P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
|+++++|++|.++|.+.++.+.+.+ +++++++ +++|.+. +..+.+.+++.+++
T Consensus 121 P~l~i~g~~D~~~~~~~~~~~~~~~------~~~~~~~-~~~H~~~-~~~~~~~~~i~~fl 173 (176)
T 2qjw_A 121 PISIVHAWHDELIPAADVIAWAQAR------SARLLLV-DDGHRLG-AHVQAASRAFAELL 173 (176)
T ss_dssp CEEEEEETTCSSSCHHHHHHHHHHH------TCEEEEE-SSCTTCT-TCHHHHHHHHHHHH
T ss_pred CEEEEEcCCCCccCHHHHHHHHHhC------CceEEEe-CCCcccc-ccHHHHHHHHHHHH
Confidence 9999999999999999999998887 3477888 7899985 44455555555444
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-24 Score=165.57 Aligned_cols=175 Identities=15% Similarity=0.164 Sum_probs=129.4
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.|+|||+||++++...|..+++.|+ .||.|+++|+||+|.+.... ..++.+.++++.+++
T Consensus 23 ~~~vv~lHG~~~~~~~~~~~~~~l~-~~~~vi~~d~~G~G~S~~~~-------------------~~~~~~~~~~~~~~~ 82 (262)
T 3r0v_A 23 GPPVVLVGGALSTRAGGAPLAERLA-PHFTVICYDRRGRGDSGDTP-------------------PYAVEREIEDLAAII 82 (262)
T ss_dssp SSEEEEECCTTCCGGGGHHHHHHHT-TTSEEEEECCTTSTTCCCCS-------------------SCCHHHHHHHHHHHH
T ss_pred CCcEEEECCCCcChHHHHHHHHHHh-cCcEEEEEecCCCcCCCCCC-------------------CCCHHHHHHHHHHHH
Confidence 5689999999999999999999998 89999999999876443210 224555666666666
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhh-------hh------------
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL-------RN------------ 174 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-------~~------------ 174 (257)
+... .+++|+|||+||.+++.++.+ +| ++++++++++........ ..
T Consensus 83 ~~l~--~~~~l~G~S~Gg~ia~~~a~~-----------~p-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (262)
T 3r0v_A 83 DAAG--GAAFVFGMSSGAGLSLLAAAS-----------GL-PITRLAVFEPPYAVDDSRPPVPPDYQTRLDALLAEGRRG 148 (262)
T ss_dssp HHTT--SCEEEEEETHHHHHHHHHHHT-----------TC-CEEEEEEECCCCCCSTTSCCCCTTHHHHHHHHHHTTCHH
T ss_pred HhcC--CCeEEEEEcHHHHHHHHHHHh-----------CC-CcceEEEEcCCcccccccchhhhHHHHHHHHHhhccchh
Confidence 6654 499999999999999999995 37 999999998754322100 00
Q ss_pred --------c-----------cc-------------------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHH
Q 025121 175 --------K-----------IE-------------------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKS 210 (257)
Q Consensus 175 --------~-----------~~-------------------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~ 210 (257)
. +. .........+++|+++++|++|.++|.+.++.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~ 228 (262)
T 3r0v_A 149 DAVTYFMTEGVGVPPDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIPTLVMDGGASPAWIRHTAQEL 228 (262)
T ss_dssp HHHHHHHHHTSCCCHHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSCEEEEECTTCCHHHHHHHHHH
T ss_pred hHHHHHhhcccCCCHHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCCEEEEeecCCCCCCHHHHHHH
Confidence 0 00 001123345689999999999999999999999
Q ss_pred HHHhhhcCceeeEEEEecCCCCccCHHH-HHHHHHHHH
Q 025121 211 ANCLSISGFRHLTFKSFEGLGHYTVPKE-MDEVCNWLT 247 (257)
Q Consensus 211 ~~~l~~~~~~~~~~~~~~g~~H~~~~~~-~~~~~~~l~ 247 (257)
.+.++ +.++++++++||...++. .+.+.+||.
T Consensus 229 ~~~~~-----~~~~~~~~~~gH~~~p~~~~~~i~~fl~ 261 (262)
T 3r0v_A 229 ADTIP-----NARYVTLENQTHTVAPDAIAPVLVEFFT 261 (262)
T ss_dssp HHHST-----TEEEEECCCSSSSCCHHHHHHHHHHHHC
T ss_pred HHhCC-----CCeEEEecCCCcccCHHHHHHHHHHHHh
Confidence 99886 679999999999654443 345556653
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.93 E-value=8.9e-25 Score=171.96 Aligned_cols=186 Identities=13% Similarity=0.058 Sum_probs=132.7
Q ss_pred CCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCC-CcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025121 30 KGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTR-PVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 30 ~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~-g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
..+..|+|||+||++++...|..++..|++ ||+|+++|+||+ |.+.... ...++.+.+++
T Consensus 63 g~~~~~~vv~lHG~~~~~~~~~~~~~~L~~-g~~vi~~D~~G~gG~s~~~~------------------~~~~~~~~~~~ 123 (306)
T 2r11_A 63 GPEDAPPLVLLHGALFSSTMWYPNIADWSS-KYRTYAVDIIGDKNKSIPEN------------------VSGTRTDYANW 123 (306)
T ss_dssp SCTTSCEEEEECCTTTCGGGGTTTHHHHHH-HSEEEEECCTTSSSSCEECS------------------CCCCHHHHHHH
T ss_pred CCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEecCCCCCCCCCCCC------------------CCCCHHHHHHH
Confidence 334568999999999999999998888874 999999999987 4432210 12234555566
Q ss_pred HHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhh--------------
Q 025121 109 IANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN-------------- 174 (257)
Q Consensus 109 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-------------- 174 (257)
+..+++..... +++|+||||||.+++.++.+. |++++++|++++..........
T Consensus 124 l~~~l~~l~~~-~~~lvG~S~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (306)
T 2r11_A 124 LLDVFDNLGIE-KSHMIGLSLGGLHTMNFLLRM-----------PERVKSAAILSPAETFLPFHHDFYKYALGLTASNGV 191 (306)
T ss_dssp HHHHHHHTTCS-SEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESCSSBTSCCCHHHHHHHHTTTSTTHH
T ss_pred HHHHHHhcCCC-ceeEEEECHHHHHHHHHHHhC-----------ccceeeEEEEcCccccCcccHHHHHHHhHHHHHHHH
Confidence 66666554443 899999999999999999954 8899999999886532110000
Q ss_pred -----cc------------------------------------ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHH
Q 025121 175 -----KI------------------------------------EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANC 213 (257)
Q Consensus 175 -----~~------------------------------------~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~ 213 (257)
.. ..........+++|+++++|++|.++|.+.+.++.+.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~ 271 (306)
T 2r11_A 192 ETFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTDEELRSARVPILLLLGEHEVIYDPHSALHRASS 271 (306)
T ss_dssp HHHHHHHTTTCCCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSCBCCHHHHHTCCSCEEEEEETTCCSSCHHHHHHHHHH
T ss_pred HHHHHHhhCCccccccccccccHHHHHHHHhhhhhhhhccCCCCCCCHHHHhcCCCCEEEEEeCCCcccCHHHHHHHHHH
Confidence 00 0011223456789999999999999998887755554
Q ss_pred -hhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 214 -LSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 214 -l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
++ ++++++++++||.+..+..+.+.+.|.+++.
T Consensus 272 ~~~-----~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 305 (306)
T 2r11_A 272 FVP-----DIEAEVIKNAGHVLSMEQPTYVNERVMRFFN 305 (306)
T ss_dssp HST-----TCEEEEETTCCTTHHHHSHHHHHHHHHHHHC
T ss_pred HCC-----CCEEEEeCCCCCCCcccCHHHHHHHHHHHHh
Confidence 43 6799999999999886666666666655543
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.93 E-value=6.2e-25 Score=169.19 Aligned_cols=184 Identities=18% Similarity=0.181 Sum_probs=135.8
Q ss_pred eEEeCCC--CCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhh
Q 025121 24 THVVRPK--GKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEG 101 (257)
Q Consensus 24 ~~~~~~~--~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 101 (257)
.++++.. +.+.|+|||+||++++...|..+++.|+..||.|+++|+++++... .....+
T Consensus 42 ~l~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~-------------------~~~~~d 102 (262)
T 1jfr_A 42 TIYYPTSTADGTFGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTNTTLDQP-------------------DSRGRQ 102 (262)
T ss_dssp EEEEESCCTTCCEEEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECCSSTTCCH-------------------HHHHHH
T ss_pred eEEecCCCCCCCCCEEEEeCCcCCCchhHHHHHHHHHhCCCEEEEeCCCCCCCCC-------------------chhHHH
Confidence 3444433 3567899999999999999999999998889999999988653210 001223
Q ss_pred HHHHHHHHHHH--hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccc
Q 025121 102 LDASAAHIANL--LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGS 179 (257)
Q Consensus 102 ~~~~~~~~~~~--~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 179 (257)
+...++.+.+. +.......+++|+||||||.+++.++.+. +. ++++++++++....
T Consensus 103 ~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----------p~-v~~~v~~~p~~~~~---------- 160 (262)
T 1jfr_A 103 LLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSR-----------TS-LKAAIPLTGWNTDK---------- 160 (262)
T ss_dssp HHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHC-----------TT-CSEEEEESCCCSCC----------
T ss_pred HHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcC-----------cc-ceEEEeecccCccc----------
Confidence 33334444331 01112234999999999999999999853 44 99999999875411
Q ss_pred hHHHhhhcCCCEEEEccCCCCcccchh-hHHHHHHhhhcCceeeEEEEecCCCCccC----HHHHHHHHHHHHHhcCcC
Q 025121 180 HEAARRAASLPILLTHGLCDDVVPYKY-GEKSANCLSISGFRHLTFKSFEGLGHYTV----PKEMDEVCNWLTARLGLE 253 (257)
Q Consensus 180 ~~~~~~~~~~P~l~~~G~~D~~v~~~~-~~~~~~~l~~~~~~~~~~~~~~g~~H~~~----~~~~~~~~~~l~~~l~~~ 253 (257)
....+++|+++++|++|.+++.+. ++.+.+.++. +. +++++++++++|.+. .+..+.+.+||.+.+...
T Consensus 161 ---~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~~-~~-~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl~~~l~~~ 234 (262)
T 1jfr_A 161 ---TWPELRTPTLVVGADGDTVAPVATHSKPFYESLPG-SL-DKAYLELRGASHFTPNTSDTTIAKYSISWLKRFIDSD 234 (262)
T ss_dssp ---CCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCT-TS-CEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHHHSCC
T ss_pred ---cccccCCCEEEEecCccccCCchhhHHHHHHHhhc-CC-CceEEEeCCCCcCCcccchHHHHHHHHHHHHHHhcCc
Confidence 123458999999999999999998 9999999964 22 679999999999886 445789999999988754
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=9.4e-25 Score=169.23 Aligned_cols=184 Identities=18% Similarity=0.177 Sum_probs=131.0
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
+++|||+||++++...|..+++.|+..||+|+++|+||+|.+... .....++.+.++++.+++
T Consensus 4 ~~~vvllHG~~~~~~~w~~~~~~L~~~g~rVia~Dl~G~G~S~~~-----------------~~~~~~~~~~a~dl~~~l 66 (273)
T 1xkl_A 4 GKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRK-----------------IEELRTLYDYTLPLMELM 66 (273)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEECCCTTSTTCCCC-----------------GGGCCSHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCcchHHHHHHHHHhCCCEEEEecCCCCCCCccC-----------------cccccCHHHHHHHHHHHH
Confidence 468999999999999999999999767999999999988654211 011235677777888888
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch--------hhhh------c----
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR--------NLRN------K---- 175 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~~~------~---- 175 (257)
+.....++++|+||||||.+++.++.+. |++++++|++++..+... .+.. .
T Consensus 67 ~~l~~~~~~~lvGhSmGG~va~~~a~~~-----------P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (273)
T 1xkl_A 67 ESLSADEKVILVGHSLGGMNLGLAMEKY-----------PQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQ 135 (273)
T ss_dssp HTSCSSSCEEEEEETTHHHHHHHHHHHC-----------GGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCE
T ss_pred HHhccCCCEEEEecCHHHHHHHHHHHhC-----------hHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHHHHH
Confidence 7764224999999999999999999864 888999888876432100 0000 0
Q ss_pred --------------c-----------ccch-H----------------HH---------hhhcCCCEEEEccCCCCcccc
Q 025121 176 --------------I-----------EGSH-E----------------AA---------RRAASLPILLTHGLCDDVVPY 204 (257)
Q Consensus 176 --------------~-----------~~~~-~----------------~~---------~~~~~~P~l~~~G~~D~~v~~ 204 (257)
. .... . .. ....++|+++++|++|.++|+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p~ 215 (273)
T 1xkl_A 136 FLPYGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPE 215 (273)
T ss_dssp EEECSCTTSCCEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTH
T ss_pred HhhccCCCCCccccccCHHHHHHHhhccCCHHHHHHHHHhcCCCchhhhhhhcccccchhhhCCCCeEEEEeCCccCCCH
Confidence 0 0000 0 00 011468999999999999999
Q ss_pred hhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 205 KYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 205 ~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
+.++.+.+.++ +.++++++++||..+.|..+.+.+.|.+++
T Consensus 216 ~~~~~~~~~~p-----~~~~~~i~~aGH~~~~e~P~~~~~~i~~fl 256 (273)
T 1xkl_A 216 EFQRWQIDNIG-----VTEAIEIKGADHMAMLCEPQKLCASLLEIA 256 (273)
T ss_dssp HHHHHHHHHHC-----CSEEEEETTCCSCHHHHSHHHHHHHHHHHH
T ss_pred HHHHHHHHhCC-----CCeEEEeCCCCCCchhcCHHHHHHHHHHHH
Confidence 99888988886 669999999999988665544444444433
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-24 Score=168.43 Aligned_cols=215 Identities=15% Similarity=0.138 Sum_probs=141.1
Q ss_pred eEEeCCC--CCCceEEEEEccCCCCccchHHH---hhcCCCCceEEEccCCCCCCcccCCCCcc------cccccCCCCC
Q 025121 24 THVVRPK--GKHQATIVWLHGLGDNGSSWSQL---LESLPLPNIKWICPTAPTRPVAILGGFPC------TAWFDVGELS 92 (257)
Q Consensus 24 ~~~~~~~--~~~~~~vi~~HG~~~~~~~~~~~---~~~l~~~g~~v~~~d~~~~g~~~~~g~~~------~~w~~~~~~~ 92 (257)
.++.++. +++.|+||++||++++...|... .+.+...|+.|+++|.+++|.+....... ..|+.... .
T Consensus 32 ~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~~~~~~~~~g~~~~~~~~~~-~ 110 (278)
T 3e4d_A 32 AVYVPPKAIHEPCPVVWYLSGLTCTHANVMEKGEYRRMASELGLVVVCPDTSPRGNDVPDELTNWQMGKGAGFYLDAT-E 110 (278)
T ss_dssp EEEECGGGGTSCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCTTCTTSBTTBCTTSBCC-S
T ss_pred EEEcCCCCCCCCCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEecCCcccCcccccccccccccCCccccccCC-c
Confidence 3344443 56789999999999999888763 33344459999999999887664332100 11111100 0
Q ss_pred CCCCCchhhHHHHHHHHHHHhccCCC--CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch
Q 025121 93 DDGPEDWEGLDASAAHIANLLSTEPA--DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR 170 (257)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 170 (257)
................+.+++++... .++++|+||||||.+++.++.+. ++.++++++++|.+....
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-----------p~~~~~~v~~~~~~~~~~ 179 (278)
T 3e4d_A 111 EPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKN-----------PERFKSCSAFAPIVAPSS 179 (278)
T ss_dssp TTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHC-----------TTTCSCEEEESCCSCGGG
T ss_pred CcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhC-----------CcccceEEEeCCcccccC
Confidence 00011111223333445555554322 25999999999999999999964 889999999998764332
Q ss_pred hhh------h--------ccccchHHHh--hhcCCCEEEEccCCCCcccchh-hHHHHHHhhhcCceeeEEEEecCCCCc
Q 025121 171 NLR------N--------KIEGSHEAAR--RAASLPILLTHGLCDDVVPYKY-GEKSANCLSISGFRHLTFKSFEGLGHY 233 (257)
Q Consensus 171 ~~~------~--------~~~~~~~~~~--~~~~~P~l~~~G~~D~~v~~~~-~~~~~~~l~~~~~~~~~~~~~~g~~H~ 233 (257)
... . +......... ....+|+++++|++|.+++.+. ++.+.+.+++.+. ++++++++|++|.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~g~-~~~~~~~~g~~H~ 258 (278)
T 3e4d_A 180 ADWSEPALEKYLGADRAAWRRYDACSLVEDGARFPEFLIDQGKADSFLEKGLRPWLFEEAIKGTDI-GLTLRMHDRYDHS 258 (278)
T ss_dssp CTTTHHHHHHHHCSCGGGGGGGCHHHHHHTTCCCSEEEEEEETTCTTHHHHTCTHHHHHHHTTSSC-EEEEEEETTCCSS
T ss_pred CccchhhHHHhcCCcHHHHHhcChhhHhhcCCCCCcEEEEecCCCcccccchhHHHHHHHHHHcCC-CceEEEeCCCCcC
Confidence 110 0 0011111111 1235699999999999999643 7889999999887 7999999999998
Q ss_pred cC--HHHHHHHHHHHHHhcC
Q 025121 234 TV--PKEMDEVCNWLTARLG 251 (257)
Q Consensus 234 ~~--~~~~~~~~~~l~~~l~ 251 (257)
+. .+.++.+++|+.+.|+
T Consensus 259 ~~~~~~~~~~~l~~~~~~l~ 278 (278)
T 3e4d_A 259 YYFISTFMDDHLKWHAERLG 278 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 64 5678889999988764
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-24 Score=171.91 Aligned_cols=180 Identities=17% Similarity=0.157 Sum_probs=130.4
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.|+|||+||++++...|..++..|+ .+|+|+++|+||+|.+.... ...++.+.++++..++
T Consensus 29 ~~pvvllHG~~~~~~~w~~~~~~L~-~~~~via~Dl~G~G~S~~~~------------------~~~~~~~~a~dl~~ll 89 (316)
T 3afi_E 29 APVVLFLHGNPTSSHIWRNILPLVS-PVAHCIAPDLIGFGQSGKPD------------------IAYRFFDHVRYLDAFI 89 (316)
T ss_dssp SCEEEEECCTTCCGGGGTTTHHHHT-TTSEEEEECCTTSTTSCCCS------------------SCCCHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCchHHHHHHHHHHh-hCCEEEEECCCCCCCCCCCC------------------CCCCHHHHHHHHHHHH
Confidence 3489999999999999999999997 45999999999887543211 1234566677777777
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCC------c-----------hh-----
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPG------S-----------RN----- 171 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~-----------~~----- 171 (257)
+..... +++|+||||||.+++.+|.+. |++++++|++++..+. . ..
T Consensus 90 ~~l~~~-~~~lvGhS~Gg~va~~~A~~~-----------P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (316)
T 3afi_E 90 EQRGVT-SAYLVAQDWGTALAFHLAARR-----------PDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARAVF 157 (316)
T ss_dssp HHTTCC-SEEEEEEEHHHHHHHHHHHHC-----------TTTEEEEEEEEECCCBSSGGGTTCCCCGGGHHHHHHHHHHH
T ss_pred HHcCCC-CEEEEEeCccHHHHHHHHHHC-----------HHhhhheeeeccCCCcchhhhccchhhccccccchhHHHHH
Confidence 765544 999999999999999999964 8899999988753210 0 00
Q ss_pred --h----------------h-hccc-----cc--------------h-----------------------------HHHh
Q 025121 172 --L----------------R-NKIE-----GS--------------H-----------------------------EAAR 184 (257)
Q Consensus 172 --~----------------~-~~~~-----~~--------------~-----------------------------~~~~ 184 (257)
+ . .... .. . ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 237 (316)
T 3afi_E 158 RKFRTPGEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEALQSAHAAL 237 (316)
T ss_dssp HHHTSTTHHHHHHTTSCHHHHTTTGGGCSSCCCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHH
T ss_pred HHhcCCchhhHHHhccchHHHHhcccccCCCCCHHHHHHHHhhcCCccchhHHHHHHHhccccccchhhhhHHHHHHHhh
Confidence 0 0 0000 00 0 0011
Q ss_pred hhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHH----HHHHHHHHHh
Q 025121 185 RAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEM----DEVCNWLTAR 249 (257)
Q Consensus 185 ~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~----~~~~~~l~~~ 249 (257)
..+++|+++++|++|.++|.+.++.+.+.++ +.++++++++||.++.|.. +.+.+||.+.
T Consensus 238 ~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p-----~~~~~~i~~~GH~~~~e~p~~~~~~i~~fl~~~ 301 (316)
T 3afi_E 238 AASSYPKLLFTGEPGALVSPEFAERFAASLT-----RCALIRLGAGLHYLQEDHADAIGRSVAGWIAGI 301 (316)
T ss_dssp HHCCSCEEEEEEEECSSSCHHHHHHHHHHSS-----SEEEEEEEEECSCHHHHHHHHHHHHHHHHHHHH
T ss_pred hccCCCeEEEecCCCCccCHHHHHHHHHhCC-----CCeEEEcCCCCCCchhhCHHHHHHHHHHHHhhc
Confidence 2368999999999999999988888888886 6799999999999886654 4455566543
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=170.20 Aligned_cols=187 Identities=13% Similarity=0.080 Sum_probs=139.6
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
+..|+|||+||++++...|..+++.|+ .||.|+++|+||+|.+.... ...++.+.++++..
T Consensus 30 ~~~~~vl~lHG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~------------------~~~~~~~~~~~~~~ 90 (299)
T 3g9x_A 30 RDGTPVLFLHGNPTSSYLWRNIIPHVA-PSHRCIAPDLIGMGKSDKPD------------------LDYFFDDHVRYLDA 90 (299)
T ss_dssp SSSCCEEEECCTTCCGGGGTTTHHHHT-TTSCEEEECCTTSTTSCCCC------------------CCCCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHHc-cCCEEEeeCCCCCCCCCCCC------------------CcccHHHHHHHHHH
Confidence 346789999999999999999999996 69999999999876543211 12344555666666
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh--hh-------h--------
Q 025121 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN--LR-------N-------- 174 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~-------~-------- 174 (257)
+++..... +++|+|||+||.+++.++.+. |+++++++++++..+.... .. .
T Consensus 91 ~~~~~~~~-~~~lvG~S~Gg~~a~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (299)
T 3g9x_A 91 FIEALGLE-EVVLVIHDWGSALGFHWAKRN-----------PERVKGIACMEFIRPFPTWDEWPEFARETFQAFRTADVG 158 (299)
T ss_dssp HHHHTTCC-SEEEEEEHHHHHHHHHHHHHS-----------GGGEEEEEEEEECCCBSSGGGSCGGGHHHHHHHTSSSHH
T ss_pred HHHHhCCC-cEEEEEeCccHHHHHHHHHhc-----------chheeEEEEecCCcchhhhhhcchHHHHHHHHHcCCCcc
Confidence 66655434 899999999999999999964 8899999998854332200 00 0
Q ss_pred ---------------------c------------ccc----------------------------chHHHhhhcCCCEEE
Q 025121 175 ---------------------K------------IEG----------------------------SHEAARRAASLPILL 193 (257)
Q Consensus 175 ---------------------~------------~~~----------------------------~~~~~~~~~~~P~l~ 193 (257)
. ... ........+++|+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~ 238 (299)
T 3g9x_A 159 RELIIDQNAFIEGALPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVPKLL 238 (299)
T ss_dssp HHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEE
T ss_pred hhhhccchhhHHHhhhhhhccCCCHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhhhhhhhhhhcccCCCCeEE
Confidence 0 000 000113456899999
Q ss_pred EccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcCcCC
Q 025121 194 THGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLGLEG 254 (257)
Q Consensus 194 ~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~~~ 254 (257)
++|++|.++|.+.++.+.+.++ ++++++++++||.+..+..+.+.+.|.+.+....
T Consensus 239 i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~e~p~~~~~~i~~~~~~~~ 294 (299)
T 3g9x_A 239 FWGTPGVLIPPAEAARLAESLP-----NCKTVDIGPGLHYLQEDNPDLIGSEIARWLPALH 294 (299)
T ss_dssp EEEEECSSSCHHHHHHHHHHST-----TEEEEEEEEESSCHHHHCHHHHHHHHHHHSGGGC
T ss_pred EecCCCCCCCHHHHHHHHhhCC-----CCeEEEeCCCCCcchhcCHHHHHHHHHHHHhhhh
Confidence 9999999999999999998886 6789999999999998888888888888765443
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-24 Score=166.68 Aligned_cols=181 Identities=17% Similarity=0.146 Sum_probs=127.6
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
..++|||+||++++...|..++..|++ .|+|+++|+||||.+... . ..++.+.++++.++
T Consensus 15 ~~~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~----------------~---~~~~~~~a~dl~~~ 74 (255)
T 3bf7_A 15 NNSPIVLVHGLFGSLDNLGVLARDLVN-DHNIIQVDVRNHGLSPRE----------------P---VMNYPAMAQDLVDT 74 (255)
T ss_dssp CCCCEEEECCTTCCTTTTHHHHHHHTT-TSCEEEECCTTSTTSCCC----------------S---CCCHHHHHHHHHHH
T ss_pred CCCCEEEEcCCcccHhHHHHHHHHHHh-hCcEEEecCCCCCCCCCC----------------C---CcCHHHHHHHHHHH
Confidence 457899999999999999999999974 499999999988654311 0 12334555666666
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCC--CC-c--hh-h--------------
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWL--PG-S--RN-L-------------- 172 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~-~--~~-~-------------- 172 (257)
++..... +++|+||||||.+++.++.+. |++++++|++++.. .. . .. +
T Consensus 75 l~~l~~~-~~~lvGhS~Gg~va~~~a~~~-----------p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (255)
T 3bf7_A 75 LDALQID-KATFIGHSMGGKAVMALTALA-----------PDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTR 142 (255)
T ss_dssp HHHHTCS-CEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSCCCSH
T ss_pred HHHcCCC-CeeEEeeCccHHHHHHHHHhC-----------cHhhccEEEEcCCcccCCcccHHHHHHHHHhccccccccH
Confidence 6554333 899999999999999999964 88999998875321 10 0 00 0
Q ss_pred -------hhcccc------------------chH-----H-------HhhhcCCCEEEEccCCCCcccchhhHHHHHHhh
Q 025121 173 -------RNKIEG------------------SHE-----A-------ARRAASLPILLTHGLCDDVVPYKYGEKSANCLS 215 (257)
Q Consensus 173 -------~~~~~~------------------~~~-----~-------~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~ 215 (257)
...... ... . ....+++|+++++|++|.+++.+.++.+.+.++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~ 222 (255)
T 3bf7_A 143 QQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFP 222 (255)
T ss_dssp HHHHHHHTTTCCCHHHHHHHHTTEETTEESSCHHHHHHTHHHHHCCCCCCCCCSCEEEECBTTCSTTCGGGHHHHHHHCT
T ss_pred HHHHHHHhhhcchhHHHHHHHHhccCCceeecHHHHHhhhhhccccccccccCCCeEEEECCCCCCCCHHHHHHHHHHCC
Confidence 000000 000 0 012467999999999999999988888888876
Q ss_pred hcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 216 ISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 216 ~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
+.++++++++||.++.+..+.+.+.+.+++
T Consensus 223 -----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 252 (255)
T 3bf7_A 223 -----QARAHVIAGAGHWVHAEKPDAVLRAIRRYL 252 (255)
T ss_dssp -----TEEECCBTTCCSCHHHHCHHHHHHHHHHHH
T ss_pred -----CCeEEEeCCCCCccccCCHHHHHHHHHHHH
Confidence 679999999999988665555555554443
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.4e-24 Score=164.33 Aligned_cols=189 Identities=15% Similarity=0.147 Sum_probs=135.3
Q ss_pred CCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025121 28 RPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 28 ~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
.+...++|+|||+||++++...|..+++.|+. +|.|+++|+||+|.+... ....++.+.++
T Consensus 14 ~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~------------------~~~~~~~~~~~ 74 (267)
T 3fla_A 14 ERAPDARARLVCLPHAGGSASFFFPLAKALAP-AVEVLAVQYPGRQDRRHE------------------PPVDSIGGLTN 74 (267)
T ss_dssp SCCTTCSEEEEEECCTTCCGGGGHHHHHHHTT-TEEEEEECCTTSGGGTTS------------------CCCCSHHHHHH
T ss_pred cCCCCCCceEEEeCCCCCCchhHHHHHHHhcc-CcEEEEecCCCCCCCCCC------------------CCCcCHHHHHH
Confidence 45556789999999999999999999999974 599999999987653211 11235567777
Q ss_pred HHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccc----cceEEEeccCCCCchh-----------h
Q 025121 108 HIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVN----LRAVVGLSGWLPGSRN-----------L 172 (257)
Q Consensus 108 ~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~-----------~ 172 (257)
++.++++.... .+++|+||||||.+++.++.+. +++ +.+++++++..+.... +
T Consensus 75 ~~~~~l~~~~~-~~~~lvG~S~Gg~ia~~~a~~~-----------~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 142 (267)
T 3fla_A 75 RLLEVLRPFGD-RPLALFGHSMGAIIGYELALRM-----------PEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERL 142 (267)
T ss_dssp HHHHHTGGGTT-SCEEEEEETHHHHHHHHHHHHT-----------TTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHH
T ss_pred HHHHHHHhcCC-CceEEEEeChhHHHHHHHHHhh-----------hhhccccccEEEECCCCccccccchhhcccchHHH
Confidence 78787776643 4999999999999999999964 554 8889888765432211 0
Q ss_pred hhcccc----------chH----------H-----------HhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCcee
Q 025121 173 RNKIEG----------SHE----------A-----------ARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRH 221 (257)
Q Consensus 173 ~~~~~~----------~~~----------~-----------~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~ 221 (257)
...+.. ... . ....+++|+++++|++|.+++.+..+.+.+.++. +
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~ 218 (267)
T 3fla_A 143 VAELRKLGGSDAAMLADPELLAMVLPAIRSDYRAVETYRHEPGRRVDCPVTVFTGDHDPRVSVGEARAWEEHTTG----P 218 (267)
T ss_dssp HHHHHHTCHHHHHHHHSHHHHHHHHHHHHHHHHHHHHCCCCTTCCBSSCEEEEEETTCTTCCHHHHHGGGGGBSS----C
T ss_pred HHHHHHhcCcchhhccCHHHHHHHHHHHHHHHHhhhcccccccCcCCCCEEEEecCCCCCCCHHHHHHHHHhcCC----C
Confidence 000000 000 0 0025689999999999999999888877777652 3
Q ss_pred eEEEEecCCCCccCHHHHHHHHHHHHHhcCc
Q 025121 222 LTFKSFEGLGHYTVPKEMDEVCNWLTARLGL 252 (257)
Q Consensus 222 ~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 252 (257)
+++++++| ||....+..+.+.+.|.+++..
T Consensus 219 ~~~~~~~g-gH~~~~~~~~~~~~~i~~fl~~ 248 (267)
T 3fla_A 219 ADLRVLPG-GHFFLVDQAAPMIATMTEKLAG 248 (267)
T ss_dssp EEEEEESS-STTHHHHTHHHHHHHHHHHTC-
T ss_pred ceEEEecC-CceeeccCHHHHHHHHHHHhcc
Confidence 79999998 9998866666666666665543
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.92 E-value=5.6e-25 Score=169.16 Aligned_cols=212 Identities=14% Similarity=0.042 Sum_probs=127.0
Q ss_pred CCCCCceEEeCCCCCCceEEEEEccCCCCcc--chHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCC-
Q 025121 18 TFEFGRTHVVRPKGKHQATIVWLHGLGDNGS--SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDD- 94 (257)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~vi~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~- 94 (257)
+..++.++..++...+.|+||++||++++.. .+..+++.|+.+||.|+++|+|++|.+......... .+.......
T Consensus 40 G~~i~g~l~~P~~~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~~-~~~~~~~~~~ 118 (259)
T 4ao6_A 40 GRTVPGVYWSPAEGSSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGHGERASVQAGREP-TDVVGLDAFP 118 (259)
T ss_dssp TEEEEEEEEEESSSCCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC--------------CCGGGSTTHH
T ss_pred CeEEEEEEEeCCCCCCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCCCCCCCccccccc-chhhhhhhhh
Confidence 3345555555666677899999999998754 467788999999999999999998754322110000 000000000
Q ss_pred ----CCCchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch
Q 025121 95 ----GPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR 170 (257)
Q Consensus 95 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 170 (257)
................+.+.......+|+++|+|+||.+++.++.. .+++.+++...++.....
T Consensus 119 ~~~~~~~~~~~~~~d~~a~l~~l~~~~d~~rv~~~G~S~GG~~a~~~a~~------------~pri~Aav~~~~~~~~~~ 186 (259)
T 4ao6_A 119 RMWHEGGGTAAVIADWAAALDFIEAEEGPRPTGWWGLSMGTMMGLPVTAS------------DKRIKVALLGLMGVEGVN 186 (259)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHHCCCCEEEEECTHHHHHHHHHHHH------------CTTEEEEEEESCCTTSTT
T ss_pred hhhhhhhhHHHHHHHHHHHHHHhhhccCCceEEEEeechhHHHHHHHHhc------------CCceEEEEEecccccccc
Confidence 0000000111111222333333344599999999999999999986 456777665544433221
Q ss_pred hhhhccccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC-HHHHHHHHHHHHHh
Q 025121 171 NLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-PKEMDEVCNWLTAR 249 (257)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~~l~~~ 249 (257)
. .........+++|+|++||++|.++|++.+.++++.+... +.++++++|..|... .+..+.+++||.+.
T Consensus 187 ~------~~~~~~a~~i~~P~Li~hG~~D~~vp~~~~~~l~~al~~~---~k~l~~~~G~H~~~p~~e~~~~~~~fl~~h 257 (259)
T 4ao6_A 187 G------EDLVRLAPQVTCPVRYLLQWDDELVSLQSGLELFGKLGTK---QKTLHVNPGKHSAVPTWEMFAGTVDYLDQR 257 (259)
T ss_dssp H------HHHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCCS---SEEEEEESSCTTCCCHHHHTHHHHHHHHHH
T ss_pred c------cchhhhhccCCCCEEEEecCCCCCCCHHHHHHHHHHhCCC---CeEEEEeCCCCCCcCHHHHHHHHHHHHHHh
Confidence 1 1122345678999999999999999999999999999654 668999998444443 45678899999998
Q ss_pred cC
Q 025121 250 LG 251 (257)
Q Consensus 250 l~ 251 (257)
|+
T Consensus 258 Lk 259 (259)
T 4ao6_A 258 LK 259 (259)
T ss_dssp CC
T ss_pred cC
Confidence 75
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.2e-24 Score=165.04 Aligned_cols=190 Identities=17% Similarity=0.170 Sum_probs=132.2
Q ss_pred ceEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhH
Q 025121 23 RTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGL 102 (257)
Q Consensus 23 ~~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 102 (257)
..+.+...++. ++|||+||++++...|..+++.|++ +|+|+++|+||||.+.... ....++
T Consensus 6 ~~~~y~~~G~g-~~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~-----------------~~~~~~ 66 (269)
T 2xmz_A 6 YKFYEANVETN-QVLVFLHGFLSDSRTYHNHIEKFTD-NYHVITIDLPGHGEDQSSM-----------------DETWNF 66 (269)
T ss_dssp EEEECCSSCCS-EEEEEECCTTCCGGGGTTTHHHHHT-TSEEEEECCTTSTTCCCCT-----------------TSCCCH
T ss_pred ceEEEEEcCCC-CeEEEEcCCCCcHHHHHHHHHHHhh-cCeEEEecCCCCCCCCCCC-----------------CCccCH
Confidence 34555555544 4699999999999999999999874 5999999999887543211 002345
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh-----------
Q 025121 103 DASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN----------- 171 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----------- 171 (257)
.+.++++.++++..... +++|+||||||.+|+.++.+. |++++++|++++.......
T Consensus 67 ~~~~~dl~~~l~~l~~~-~~~lvGhS~Gg~va~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 134 (269)
T 2xmz_A 67 DYITTLLDRILDKYKDK-SITLFGYSMGGRVALYYAING-----------HIPISNLILESTSPGIKEEANQLERRLVDD 134 (269)
T ss_dssp HHHHHHHHHHHGGGTTS-EEEEEEETHHHHHHHHHHHHC-----------SSCCSEEEEESCCSCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCC-cEEEEEECchHHHHHHHHHhC-----------chheeeeEEEcCCcccCCchhHHHHhhhhh
Confidence 66677777777765444 999999999999999999964 8899999998864321100
Q ss_pred -----h-----h---h-c-----ccc----ch---------------------------------HHHhhhcCCCEEEEc
Q 025121 172 -----L-----R---N-K-----IEG----SH---------------------------------EAARRAASLPILLTH 195 (257)
Q Consensus 172 -----~-----~---~-~-----~~~----~~---------------------------------~~~~~~~~~P~l~~~ 195 (257)
+ . . . +.. .. ......+++|+++++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 214 (269)
T 2xmz_A 135 ARAKVLDIAGIELFVNDWEKLPLFQSQLELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILA 214 (269)
T ss_dssp HHHHHHHHHCHHHHHHHHTTSGGGGGGGGSCHHHHHHHHHHHHTSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEE
T ss_pred HHHHhhccccHHHHHHHHHhCccccccccCCHHHHHHHHHHHhccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEE
Confidence 0 0 0 0 000 00 012335679999999
Q ss_pred cCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHh
Q 025121 196 GLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTAR 249 (257)
Q Consensus 196 G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 249 (257)
|++|.+++.+..+ +.+.++ ++++++++++||.++.+..+.+.+.|.++
T Consensus 215 G~~D~~~~~~~~~-~~~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~f 262 (269)
T 2xmz_A 215 GEYDEKFVQIAKK-MANLIP-----NSKCKLISATGHTIHVEDSDEFDTMILGF 262 (269)
T ss_dssp ETTCHHHHHHHHH-HHHHST-----TEEEEEETTCCSCHHHHSHHHHHHHHHHH
T ss_pred eCCCcccCHHHHH-HHhhCC-----CcEEEEeCCCCCChhhcCHHHHHHHHHHH
Confidence 9999999987654 666665 67999999999998855544444444333
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=99.92 E-value=8.1e-25 Score=168.12 Aligned_cols=184 Identities=16% Similarity=0.101 Sum_probs=131.9
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
+++|||+||++.+...|..++..|++.||+|+++|+||||.+... .....++.+.++++.+++
T Consensus 3 ~~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~-----------------~~~~~~~~~~a~dl~~~l 65 (257)
T 3c6x_A 3 FAHFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQ-----------------IEEIGSFDEYSEPLLTFL 65 (257)
T ss_dssp CCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCC-----------------GGGCCSHHHHTHHHHHHH
T ss_pred CCcEEEEcCCccCcCCHHHHHHHHHhCCCEEEEeCCCCCCCCCCC-----------------cccccCHHHHHHHHHHHH
Confidence 468999999999999999999999767999999999988754211 011235667777777888
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc-----h---hhh-------hc---
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS-----R---NLR-------NK--- 175 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~---~~~-------~~--- 175 (257)
+.....++++|+||||||.+++.++.++ |++++++|++++..+.. . ... ..
T Consensus 66 ~~l~~~~~~~lvGhSmGG~va~~~a~~~-----------p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (257)
T 3c6x_A 66 EALPPGEKVILVGESCGGLNIAIAADKY-----------CEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYF 134 (257)
T ss_dssp HTSCTTCCEEEEEEETHHHHHHHHHHHH-----------GGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCCCTTCEEE
T ss_pred HhccccCCeEEEEECcchHHHHHHHHhC-----------chhhheEEEEecccCCCCCcchhHHHHHhhcCcchhhhhhh
Confidence 7663224899999999999999999965 78888888876542110 0 000 00
Q ss_pred -------------c----------ccch------------------HH--------HhhhcCCCEEEEccCCCCcccchh
Q 025121 176 -------------I----------EGSH------------------EA--------ARRAASLPILLTHGLCDDVVPYKY 206 (257)
Q Consensus 176 -------------~----------~~~~------------------~~--------~~~~~~~P~l~~~G~~D~~v~~~~ 206 (257)
. .... .. .....++|+++++|++|.++|.+.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~ 214 (257)
T 3c6x_A 135 TYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEF 214 (257)
T ss_dssp EEEETTEEEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHSCCCCTTTGGGSCEEEEECTTCSSSCHHH
T ss_pred hccCCCCccccccccHHHHHHHHhcCCCHHHHHHHHHhcCCCccchhhhccccccChhhcCcccEEEEEeCCCcccCHHH
Confidence 0 0000 00 001136899999999999999999
Q ss_pred hHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 207 GEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 207 ~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
++.+.+.++ +.++++++++||..+.|..+.+.+.|.+++
T Consensus 215 ~~~~~~~~~-----~~~~~~i~~~gH~~~~e~P~~~~~~l~~f~ 253 (257)
T 3c6x_A 215 QLWQIENYK-----PDKVYKVEGGDHKLQLTKTKEIAEILQEVA 253 (257)
T ss_dssp HHHHHHHSC-----CSEEEECCSCCSCHHHHSHHHHHHHHHHHH
T ss_pred HHHHHHHCC-----CCeEEEeCCCCCCcccCCHHHHHHHHHHHH
Confidence 988888886 669999999999998666655555555443
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.6e-24 Score=171.40 Aligned_cols=210 Identities=15% Similarity=0.161 Sum_probs=141.6
Q ss_pred ceEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCC-----cccccccCCCCCCCCCC
Q 025121 23 RTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGF-----PCTAWFDVGELSDDGPE 97 (257)
Q Consensus 23 ~~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~-----~~~~w~~~~~~~~~~~~ 97 (257)
..++.+....+.|+||++||++++...|..+...+ ..||.|+++|+|++|.+..... ....|...+........
T Consensus 97 ~~~~~P~~~~~~p~vv~~HG~g~~~~~~~~~~~~~-~~G~~v~~~D~rG~g~s~~~~~~~~~~~~~~~~~~g~~~~~~~~ 175 (346)
T 3fcy_A 97 AKYIKPKTEGKHPALIRFHGYSSNSGDWNDKLNYV-AAGFTVVAMDVRGQGGQSQDVGGVTGNTLNGHIIRGLDDDADNM 175 (346)
T ss_dssp EEEEEESCSSCEEEEEEECCTTCCSCCSGGGHHHH-TTTCEEEEECCTTSSSSCCCCCCCSSCCSBCSSSTTTTSCGGGC
T ss_pred EEEEecCCCCCcCEEEEECCCCCCCCChhhhhHHH-hCCcEEEEEcCCCCCCCCCCCcccCCCCcCcceeccccCCHHHH
Confidence 33443444567899999999999999988777555 5899999999999875543211 11111111111011111
Q ss_pred chhhHHHHHHHHHHHhccCC--CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhh-
Q 025121 98 DWEGLDASAAHIANLLSTEP--ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN- 174 (257)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~- 174 (257)
....+.+++..+.+++.... +.++++|+|||+||.+++.++.+. +. ++++++++|++........
T Consensus 176 ~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~-----------p~-v~~~vl~~p~~~~~~~~~~~ 243 (346)
T 3fcy_A 176 LFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALE-----------PR-VRKVVSEYPFLSDYKRVWDL 243 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHS-----------TT-CCEEEEESCSSCCHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhC-----------cc-ccEEEECCCcccCHHHHhhc
Confidence 12223333444445554432 235999999999999999999963 55 9999999887542211100
Q ss_pred ------------ccc------------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEE
Q 025121 175 ------------KIE------------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTF 224 (257)
Q Consensus 175 ------------~~~------------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 224 (257)
.+. .........+++|+++++|+.|.++|++.+..+++.++. ++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~----~~~~ 319 (346)
T 3fcy_A 244 DLAKNAYQEITDYFRLFDPRHERENEVFTKLGYIDVKNLAKRIKGDVLMCVGLMDQVCPPSTVFAAYNNIQS----KKDI 319 (346)
T ss_dssp TCCCGGGHHHHHHHHHHCTTCTTHHHHHHHHGGGCHHHHGGGCCSEEEEEEETTCSSSCHHHHHHHHTTCCS----SEEE
T ss_pred cccccchHHHHHHHHhcCCCcchHHHHHHHhCcccHHHHHHhcCCCEEEEeeCCCCcCCHHHHHHHHHhcCC----CcEE
Confidence 000 011123456789999999999999999988888888764 5799
Q ss_pred EEecCCCCccCHHHHHHHHHHHHHh
Q 025121 225 KSFEGLGHYTVPKEMDEVCNWLTAR 249 (257)
Q Consensus 225 ~~~~g~~H~~~~~~~~~~~~~l~~~ 249 (257)
+++++++|.+..+..+.+.+||.+.
T Consensus 320 ~~~~~~gH~~~~~~~~~i~~fl~~l 344 (346)
T 3fcy_A 320 KVYPDYGHEPMRGFGDLAMQFMLEL 344 (346)
T ss_dssp EEETTCCSSCCTTHHHHHHHHHHTT
T ss_pred EEeCCCCCcCHHHHHHHHHHHHHHh
Confidence 9999999999988889999999874
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.7e-25 Score=173.57 Aligned_cols=185 Identities=12% Similarity=0.145 Sum_probs=132.4
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.|+|||+||++++...|..+++.|...||.|+++|+||+|.+.... ...++.+.++++..++
T Consensus 29 ~~~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~S~~~~------------------~~~~~~~~~~~~~~~~ 90 (309)
T 3u1t_A 29 GQPVLFLHGNPTSSYLWRNIIPYVVAAGYRAVAPDLIGMGDSAKPD------------------IEYRLQDHVAYMDGFI 90 (309)
T ss_dssp SSEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCCCS------------------SCCCHHHHHHHHHHHH
T ss_pred CCEEEEECCCcchhhhHHHHHHHHHhCCCEEEEEccCCCCCCCCCC------------------cccCHHHHHHHHHHHH
Confidence 5799999999999999999998855589999999999876543211 1223455555565555
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch------hh---------------
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR------NL--------------- 172 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~--------------- 172 (257)
+..... +++|+||||||.+++.++.+. |++++++|++++..+... ..
T Consensus 91 ~~~~~~-~~~lvGhS~Gg~~a~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (309)
T 3u1t_A 91 DALGLD-DMVLVIHDWGSVIGMRHARLN-----------PDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLRTAD 158 (309)
T ss_dssp HHHTCC-SEEEEEEEHHHHHHHHHHHHC-----------TTTEEEEEEEEESCTTTCSBSCSGGGHHHHHHHHHHHTSTT
T ss_pred HHcCCC-ceEEEEeCcHHHHHHHHHHhC-----------hHhheEEEEeccCCCCccccccccccchhhhHHHHHHhccc
Confidence 554333 899999999999999999954 889999999986543220 00
Q ss_pred ----------------------hhcc------------cc----------------------------chHHHhhhcCCC
Q 025121 173 ----------------------RNKI------------EG----------------------------SHEAARRAASLP 190 (257)
Q Consensus 173 ----------------------~~~~------------~~----------------------------~~~~~~~~~~~P 190 (257)
...+ .. ........+++|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 238 (309)
T 3u1t_A 159 VGEKMVLDGNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWLMASPIP 238 (309)
T ss_dssp HHHHHHTTTCHHHHTHHHHTSCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSC
T ss_pred hhhhhccccceehhhhcccccccccCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhhhhhhhhhhhcccCCCC
Confidence 0000 00 000123456899
Q ss_pred EEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHH----HHHHHHHHHHhcCcC
Q 025121 191 ILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKE----MDEVCNWLTARLGLE 253 (257)
Q Consensus 191 ~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~----~~~~~~~l~~~l~~~ 253 (257)
+++++|++|.++|.+.++.+.+.++ +.++++++++||.+..+. .+.+.+||.+.....
T Consensus 239 ~l~i~G~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~~~~ 300 (309)
T 3u1t_A 239 KLLFHAEPGALAPKPVVDYLSENVP-----NLEVRFVGAGTHFLQEDHPHLIGQGIADWLRRNKPHA 300 (309)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHST-----TEEEEEEEEESSCHHHHCHHHHHHHHHHHHHHHCCCC
T ss_pred EEEEecCCCCCCCHHHHHHHHhhCC-----CCEEEEecCCcccchhhCHHHHHHHHHHHHHhcchhh
Confidence 9999999999999999989999887 557778899999887443 455777777765443
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.92 E-value=4e-24 Score=166.83 Aligned_cols=190 Identities=14% Similarity=0.032 Sum_probs=137.0
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
+.|+|||+||++++...|..+++.|+..||.|+++|+|++|.+.... .........+++..+.+.
T Consensus 27 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~g~s~~~~---------------~~~~~~~~~~d~~~~i~~ 91 (290)
T 3ksr_A 27 GMPGVLFVHGWGGSQHHSLVRAREAVGLGCICMTFDLRGHEGYASMR---------------QSVTRAQNLDDIKAAYDQ 91 (290)
T ss_dssp SEEEEEEECCTTCCTTTTHHHHHHHHTTTCEEECCCCTTSGGGGGGT---------------TTCBHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCCCCcCcHHHHHHHHHHCCCEEEEeecCCCCCCCCCc---------------ccccHHHHHHHHHHHHHH
Confidence 78999999999999999999999999889999999999876543210 111233333444444444
Q ss_pred hccCC--CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh------h----------
Q 025121 113 LSTEP--ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR------N---------- 174 (257)
Q Consensus 113 ~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------~---------- 174 (257)
+.... +.++++|+||||||.+++.++.+. + +++++++++.......+. .
T Consensus 92 l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~-----------~--~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (290)
T 3ksr_A 92 LASLPYVDAHSIAVVGLSYGGYLSALLTRER-----------P--VEWLALRSPALYKDAHWDQPKVSLNADPDLMDYRR 158 (290)
T ss_dssp HHTSTTEEEEEEEEEEETHHHHHHHHHTTTS-----------C--CSEEEEESCCCCCSSCTTSBHHHHHHSTTHHHHTT
T ss_pred HHhcCCCCccceEEEEEchHHHHHHHHHHhC-----------C--CCEEEEeCcchhhhhhhhcccccccCChhhhhhhh
Confidence 44332 234899999999999999999842 3 788888877543221100 0
Q ss_pred ----ccccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC-----HHHHHHHHHH
Q 025121 175 ----KIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-----PKEMDEVCNW 245 (257)
Q Consensus 175 ----~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-----~~~~~~~~~~ 245 (257)
............+++|+++++|+.|.+++.+.++.+.+.++..+ +++++++++++|.+. .+..+.+.+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~~i~~f 236 (290)
T 3ksr_A 159 RALAPGDNLALAACAQYKGDVLLVEAENDVIVPHPVMRNYADAFTNAR--SLTSRVIAGADHALSVKEHQQEYTRALIDW 236 (290)
T ss_dssp SCCCGGGCHHHHHHHHCCSEEEEEEETTCSSSCHHHHHHHHHHTTTSS--EEEEEEETTCCTTCCSHHHHHHHHHHHHHH
T ss_pred hhhhhccccHHHHHHhcCCCeEEEEecCCcccChHHHHHHHHHhccCC--CceEEEcCCCCCCCCcchHHHHHHHHHHHH
Confidence 00111223456678999999999999999999999999998764 578999999999875 2345788999
Q ss_pred HHHhcCc
Q 025121 246 LTARLGL 252 (257)
Q Consensus 246 l~~~l~~ 252 (257)
|.+.+..
T Consensus 237 l~~~~~~ 243 (290)
T 3ksr_A 237 LTEMVVG 243 (290)
T ss_dssp HHHHHHT
T ss_pred HHHHhcC
Confidence 9887653
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.3e-24 Score=156.64 Aligned_cols=175 Identities=17% Similarity=0.137 Sum_probs=125.1
Q ss_pred CceEEEEEccCCCCc---cchHH-HhhcCCCC-ceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025121 33 HQATIVWLHGLGDNG---SSWSQ-LLESLPLP-NIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~---~~~~~-~~~~l~~~-g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
+.|+|||+||++++. ..|.. +++.|++. ||.|+++|+|+++ ..+..+++.
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~-------------------------~~~~~~~~~ 57 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPI-------------------------TARESIWLP 57 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTT-------------------------TCCHHHHHH
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCC-------------------------cccHHHHHH
Confidence 457999999999984 56766 78888866 9999999988421 012233344
Q ss_pred HHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhh----cccc-chHH
Q 025121 108 HIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN----KIEG-SHEA 182 (257)
Q Consensus 108 ~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----~~~~-~~~~ 182 (257)
.+. +......+++|+||||||.+++.++.+. | ++++++++++.+....... .+.. ....
T Consensus 58 ~~~---~~l~~~~~~~lvG~S~Gg~ia~~~a~~~-----------p--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (194)
T 2qs9_A 58 FME---TELHCDEKTIIIGHSSGAIAAMRYAETH-----------R--VYAIVLVSAYTSDLGDENERASGYFTRPWQWE 121 (194)
T ss_dssp HHH---HTSCCCTTEEEEEETHHHHHHHHHHHHS-----------C--CSEEEEESCCSSCTTCHHHHHTSTTSSCCCHH
T ss_pred HHH---HHhCcCCCEEEEEcCcHHHHHHHHHHhC-----------C--CCEEEEEcCCccccchhhhHHHhhhcccccHH
Confidence 443 3333224999999999999999999853 5 9999999987643211111 1111 1122
Q ss_pred HhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC---HHHHHHHHHHHHHhcCcCC
Q 025121 183 ARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV---PKEMDEVCNWLTARLGLEG 254 (257)
Q Consensus 183 ~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~---~~~~~~~~~~l~~~l~~~~ 254 (257)
......+|+++++|++|.++|.+.++.+.+.+ . .++++++++||.+. ++.+..+++||.+......
T Consensus 122 ~~~~~~~p~lii~G~~D~~vp~~~~~~~~~~~-~-----~~~~~~~~~gH~~~~~~p~~~~~~~~fl~~~~~~~~ 190 (194)
T 2qs9_A 122 KIKANCPYIVQFGSTDDPFLPWKEQQEVADRL-E-----TKLHKFTDCGHFQNTEFHELITVVKSLLKVPALEHH 190 (194)
T ss_dssp HHHHHCSEEEEEEETTCSSSCHHHHHHHHHHH-T-----CEEEEESSCTTSCSSCCHHHHHHHHHHHTCCCCCCC
T ss_pred HHHhhCCCEEEEEeCCCCcCCHHHHHHHHHhc-C-----CeEEEeCCCCCccchhCHHHHHHHHHHHHhhhhhhh
Confidence 33445789999999999999999999998888 2 38899999999987 5667778888887665543
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=4.2e-24 Score=166.04 Aligned_cols=208 Identities=15% Similarity=0.149 Sum_probs=138.8
Q ss_pred CCCceEEEEEccCCCCccchHH---HhhcCCCCceEEEccCCCCCCcccCCCCc-----ccccccCCCCCCCCCCchhhH
Q 025121 31 GKHQATIVWLHGLGDNGSSWSQ---LLESLPLPNIKWICPTAPTRPVAILGGFP-----CTAWFDVGELSDDGPEDWEGL 102 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~~---~~~~l~~~g~~v~~~d~~~~g~~~~~g~~-----~~~w~~~~~~~~~~~~~~~~~ 102 (257)
+++.|+||++||++++...|.. +.+.+...|+.|+++|.++||.+...... ...||..... ..........
T Consensus 42 ~~~~P~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~~~~~~~~~g~g~~~~~~~~~-~~~~~~~~~~ 120 (280)
T 3ls2_A 42 SNKVPVLYWLSGLTCTDENFMQKAGAFKKAAELGIAIVAPDTSPRGDNVPNEDSYDFAQGAGFYVNATQ-APYNTHFNMY 120 (280)
T ss_dssp TBCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCSCTTSSTTCCTTCBCCS-TTTTTTCBHH
T ss_pred CCCcCEEEEeCCCCCChhhhhcchhHHHHHhhCCeEEEEeCCcccccccccccccccccCCcccccccc-ccccccccHH
Confidence 4577999999999999888765 33344456999999999888766443210 0111211100 0000111112
Q ss_pred HHHHHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh--------
Q 025121 103 DASAAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR-------- 173 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-------- 173 (257)
....+.+..++++.. ..++++|+||||||.+|+.++.+. |+.++++++++|.+.......
T Consensus 121 ~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~-----------p~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 189 (280)
T 3ls2_A 121 DYVVNELPALIEQHFPVTSTKAISGHSMGGHGALMIALKN-----------PQDYVSASAFSPIVNPINCPWGVKAFTGY 189 (280)
T ss_dssp HHHHTHHHHHHHHHSSEEEEEEEEEBTHHHHHHHHHHHHS-----------TTTCSCEEEESCCSCGGGSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCCeEEEEECHHHHHHHHHHHhC-----------chhheEEEEecCccCcccCcchhhHHHhh
Confidence 333344444444332 225999999999999999999964 889999999999765332100
Q ss_pred ------hccccchHHHhhhc----CCCEEEEccCCCCcccchh-hHHHHHHhhhcCceeeEEEEecCCCCccC--HHHHH
Q 025121 174 ------NKIEGSHEAARRAA----SLPILLTHGLCDDVVPYKY-GEKSANCLSISGFRHLTFKSFEGLGHYTV--PKEMD 240 (257)
Q Consensus 174 ------~~~~~~~~~~~~~~----~~P~l~~~G~~D~~v~~~~-~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~~ 240 (257)
.............. .+|+++++|+.|.+++.+. ++.+.+.+++.+. +++++++||++|.+. .+.++
T Consensus 190 ~g~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~~g~-~~~~~~~~g~~H~~~~~~~~~~ 268 (280)
T 3ls2_A 190 LGADKTTWAQYDSCKLMAKAEQSNYLPMLVSQGDADNFLDEQLKPQNLVAVAKQKDY-PLTLEMQTGYDHSYFFISSFID 268 (280)
T ss_dssp HCSCGGGTGGGCHHHHHHTCCGGGCCCEEEEEETTCTTCCCCCCHHHHHHHHHHHTC-CEEEEEETTCCSSHHHHHHHHH
T ss_pred cCchHHHHHhcCHHHHHHhccccCCCcEEEEEeCCCcccCCchhHHHHHHHHHHhCC-CceEEEeCCCCCchhhHHHHHH
Confidence 00011111122222 6799999999999999855 7889999998887 899999999999865 56788
Q ss_pred HHHHHHHHhcC
Q 025121 241 EVCNWLTARLG 251 (257)
Q Consensus 241 ~~~~~l~~~l~ 251 (257)
.+++|+.+.|.
T Consensus 269 ~~~~~~~~~l~ 279 (280)
T 3ls2_A 269 QHLVFHHQYLS 279 (280)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhc
Confidence 89999998775
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-23 Score=161.94 Aligned_cols=196 Identities=14% Similarity=0.157 Sum_probs=130.5
Q ss_pred CCCceEEEEEccCC-----CCccchHHHhhcC----CCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhh
Q 025121 31 GKHQATIVWLHGLG-----DNGSSWSQLLESL----PLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEG 101 (257)
Q Consensus 31 ~~~~~~vi~~HG~~-----~~~~~~~~~~~~l----~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 101 (257)
+++.|+|||+||.+ ++...|..+++.| +..||.|+++|+++.+.. .. ...
T Consensus 38 ~~~~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~------------------~~---~~~ 96 (273)
T 1vkh_A 38 QNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEI------------------TN---PRN 96 (273)
T ss_dssp TTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTS------------------CT---THH
T ss_pred CCCCeEEEEECCCcccCCcCChHHHHHHHHHHhhhhccCCcEEEEeecccCCCC------------------CC---CcH
Confidence 56789999999965 3566788888888 568999999998742210 01 123
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCC------CcccccceEEEeccCCCCchhhhh-
Q 025121 102 LDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGI------PYYVNLRAVVGLSGWLPGSRNLRN- 174 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~~~~~~~~~~~~- 174 (257)
+.+..+.+..+++.. ..++++|+||||||.+++.++.+.......... ..+.+++++++++++.+.......
T Consensus 97 ~~d~~~~~~~l~~~~-~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~ 175 (273)
T 1vkh_A 97 LYDAVSNITRLVKEK-GLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEY 175 (273)
T ss_dssp HHHHHHHHHHHHHHH-TCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHC
T ss_pred HHHHHHHHHHHHHhC-CcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhhc
Confidence 334444444443332 234999999999999999999863210000000 016789999999987654321110
Q ss_pred ---------cc-------c-cchHH------HhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCC
Q 025121 175 ---------KI-------E-GSHEA------ARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLG 231 (257)
Q Consensus 175 ---------~~-------~-~~~~~------~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~ 231 (257)
.+ . ..... ......+|+++++|++|.++|.+.++.+.+.++..+. +++++++++++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~-~~~~~~~~~~g 254 (273)
T 1vkh_A 176 PEYDCFTRLAFPDGIQMYEEEPSRVMPYVKKALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQL-SFKLYLDDLGL 254 (273)
T ss_dssp GGGHHHHHHHCTTCGGGCCCCHHHHHHHHHHHHHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTC-CEEEEEECCCS
T ss_pred ccHHHHHHHHhcccccchhhcccccChhhhhcccccCCCEEEEecCCcCCCChHHHHHHHHHHHhcCC-ceEEEEeCCCc
Confidence 00 0 00000 1122789999999999999999999999999998776 78999999999
Q ss_pred CccCHHHHHHHHHHHHHhc
Q 025121 232 HYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 232 H~~~~~~~~~~~~~l~~~l 250 (257)
|....+. +.+.+.+.+++
T Consensus 255 H~~~~~~-~~~~~~i~~fl 272 (273)
T 1vkh_A 255 HNDVYKN-GKVAKYIFDNI 272 (273)
T ss_dssp GGGGGGC-HHHHHHHHHTC
T ss_pred ccccccC-hHHHHHHHHHc
Confidence 9987555 55555555543
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=99.92 E-value=4.5e-24 Score=166.14 Aligned_cols=182 Identities=18% Similarity=0.229 Sum_probs=127.6
Q ss_pred ceEEEEEccCCCCcc---chHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025121 34 QATIVWLHGLGDNGS---SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~---~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
.++|||+||++.+.. .|..++..|+ .+|+|+++|+||+|.+.... ....++.+.++++.
T Consensus 25 g~~vvllHG~~~~~~~~~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~-----------------~~~~~~~~~a~dl~ 86 (282)
T 1iup_A 25 GQPVILIHGSGPGVSAYANWRLTIPALS-KFYRVIAPDMVGFGFTDRPE-----------------NYNYSKDSWVDHII 86 (282)
T ss_dssp SSEEEEECCCCTTCCHHHHHTTTHHHHT-TTSEEEEECCTTSTTSCCCT-----------------TCCCCHHHHHHHHH
T ss_pred CCeEEEECCCCCCccHHHHHHHHHHhhc-cCCEEEEECCCCCCCCCCCC-----------------CCCCCHHHHHHHHH
Confidence 457999999987665 5666777775 78999999999887543211 00234566677777
Q ss_pred HHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc----------------hhhhh
Q 025121 111 NLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS----------------RNLRN 174 (257)
Q Consensus 111 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----------------~~~~~ 174 (257)
++++..... +++|+||||||.+++.+|.++ |++++++|++++..... ..+..
T Consensus 87 ~~l~~l~~~-~~~lvGhS~GG~ia~~~A~~~-----------P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (282)
T 1iup_A 87 GIMDALEIE-KAHIVGNAFGGGLAIATALRY-----------SERVDRMVLMGAAGTRFDVTEGLNAVWGYTPSIENMRN 154 (282)
T ss_dssp HHHHHTTCC-SEEEEEETHHHHHHHHHHHHS-----------GGGEEEEEEESCCCSCCCCCHHHHHHHTCCSCHHHHHH
T ss_pred HHHHHhCCC-ceEEEEECHhHHHHHHHHHHC-----------hHHHHHHHeeCCccCCCCCCHHHHHHhcCCCcHHHHHH
Confidence 777765444 899999999999999999964 88999999987643210 00000
Q ss_pred -------------------cc---c-------------cc----------hHHHhhhcCCCEEEEccCCCCcccchhhHH
Q 025121 175 -------------------KI---E-------------GS----------HEAARRAASLPILLTHGLCDDVVPYKYGEK 209 (257)
Q Consensus 175 -------------------~~---~-------------~~----------~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~ 209 (257)
.. . .. .......+++|+++++|++|.++|.+.++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~ 234 (282)
T 1iup_A 155 LLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLR 234 (282)
T ss_dssp HHHHHCSSGGGCCHHHHHHHHHHHTSTTHHHHHHHHSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCHHHHHH
T ss_pred HHHHhhcCcccCCHHHHHHHHhhccChHHHHHHHHHHhccccccccccccchhhhhhcCCCEEEEecCCCCCCCHHHHHH
Confidence 00 0 00 002234568999999999999999999988
Q ss_pred HHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 210 SANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 210 ~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
+.+.++ +.++++++++||..+.+..+.+.+.+.+++
T Consensus 235 ~~~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 270 (282)
T 1iup_A 235 LGELID-----RAQLHVFGRCGHWTQIEQTDRFNRLVVEFF 270 (282)
T ss_dssp HHHHCT-----TEEEEEESSCCSCHHHHSHHHHHHHHHHHH
T ss_pred HHHhCC-----CCeEEEECCCCCCccccCHHHHHHHHHHHH
Confidence 888886 679999999999987555444444444333
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-24 Score=175.34 Aligned_cols=206 Identities=14% Similarity=0.055 Sum_probs=136.5
Q ss_pred CCceEEEEEccCCCCccc-------------hHHHh---hcCCCCceEEEccCCCCCCcccC--C-CCcccccccCCCCC
Q 025121 32 KHQATIVWLHGLGDNGSS-------------WSQLL---ESLPLPNIKWICPTAPTRPVAIL--G-GFPCTAWFDVGELS 92 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~-------------~~~~~---~~l~~~g~~v~~~d~~~~g~~~~--~-g~~~~~w~~~~~~~ 92 (257)
.+.|+|||+||++++... |..++ +.|...+|+|+++|+||||.+.. . +.+..+.-...+..
T Consensus 40 ~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~G~S~G~~~g~~g~~~~~p~~~~~ 119 (377)
T 3i1i_A 40 ERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDNLCNVQVKNPHVITTGPKSINPKTGDE 119 (377)
T ss_dssp TCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSCTTSTTCCCCSTTSBCTTTSSB
T ss_pred CCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEecccccccccCCCcccCCCCCCCCCCCCc
Confidence 346899999999999777 77777 66767899999999999976431 1 11000000000000
Q ss_pred CCCCCchhhHHHHHHHHHHHhccCCCCceEE-EEEechhHHHHHHHHHhccccCCCCCCCcccccceEEE-eccCCCCch
Q 025121 93 DDGPEDWEGLDASAAHIANLLSTEPADVKVG-IGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVG-LSGWLPGSR 170 (257)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~ 170 (257)
........++.+.++++..+++..... +++ |+||||||.+++.+|.+. |++++++|+ +++......
T Consensus 120 ~~~~~~~~~~~~~~~d~~~~l~~l~~~-~~~ilvGhS~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~ 187 (377)
T 3i1i_A 120 YAMDFPVFTFLDVARMQCELIKDMGIA-RLHAVMGPSAGGMIAQQWAVHY-----------PHMVERMIGVITNPQNPII 187 (377)
T ss_dssp CGGGSCCCCHHHHHHHHHHHHHHTTCC-CBSEEEEETHHHHHHHHHHHHC-----------TTTBSEEEEESCCSBCCHH
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHcCCC-cEeeEEeeCHhHHHHHHHHHHC-----------hHHHHHhcccCcCCCcCCc
Confidence 000011335677777777777665444 775 999999999999999964 889999998 554332000
Q ss_pred ------------------------------------------------hhhhcccc------------------------
Q 025121 171 ------------------------------------------------NLRNKIEG------------------------ 178 (257)
Q Consensus 171 ------------------------------------------------~~~~~~~~------------------------ 178 (257)
.+...+..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (377)
T 3i1i_A 188 TSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNSIEVEPYEKVSSLTSFEKEINKL 267 (377)
T ss_dssp HHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHHHSCCCSSCCGGGTCTTCCCHHHHHHHHH
T ss_pred hhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHHHhhhhhccccccccccchhHHHHHHHHH
Confidence 00000000
Q ss_pred ------------------------------chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEec
Q 025121 179 ------------------------------SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFE 228 (257)
Q Consensus 179 ------------------------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~ 228 (257)
........+++|+++++|++|.++|++.++.+.+.++..+. ++++++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~g~-~~~~~~i~ 346 (377)
T 3i1i_A 268 TYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSRYNYKMVDLLQKQGK-YAEVYEIE 346 (377)
T ss_dssp HHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCSSSCTHHHHHHHHHHHHTTC-CEEECCBC
T ss_pred HhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCccccCHHHHHHHHHHHHhcCC-CceEEEcC
Confidence 00112345789999999999999999999999999965432 78999999
Q ss_pred C-CCCccCHH----HHHHHHHHHHHhc
Q 025121 229 G-LGHYTVPK----EMDEVCNWLTARL 250 (257)
Q Consensus 229 g-~~H~~~~~----~~~~~~~~l~~~l 250 (257)
+ +||..+.+ ..+.+.+||.+.+
T Consensus 347 ~~~gH~~~~e~p~~~~~~i~~fl~~~~ 373 (377)
T 3i1i_A 347 SINGHMAGVFDIHLFEKKVYEFLNRKV 373 (377)
T ss_dssp CTTGGGHHHHCGGGTHHHHHHHHHSCC
T ss_pred CCCCCcchhcCHHHHHHHHHHHHHhhh
Confidence 8 99987643 3466777776654
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-24 Score=158.82 Aligned_cols=176 Identities=14% Similarity=0.155 Sum_probs=130.0
Q ss_pred CceEEEEEccCCCCcc-chHHHhh-cCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGS-SWSQLLE-SLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~-~~~~~~~-~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
..|+|||+||++++.. .|..... .|+..||.|+++|+|.. . ..++.+.++++.
T Consensus 3 g~p~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~-----------------~--------~~~~~~~~~~~~ 57 (192)
T 1uxo_A 3 GTKQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNP-----------------L--------QPRLEDWLDTLS 57 (192)
T ss_dssp -CCEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCT-----------------T--------SCCHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcchhHHHHHHHHHHhCCcEEEEecCCCC-----------------C--------CCCHHHHHHHHH
Confidence 4567999999999998 7887764 57668999999997610 0 013566677777
Q ss_pred HHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCccc--ccceEEEeccCCCCchhhhh---cccc-chHHHh
Q 025121 111 NLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYV--NLRAVVGLSGWLPGSRNLRN---KIEG-SHEAAR 184 (257)
Q Consensus 111 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~---~~~~-~~~~~~ 184 (257)
.+++.. ..+++|+||||||.+++.++.+. +. +++++++++++.+....+.. .... ......
T Consensus 58 ~~~~~~--~~~~~l~G~S~Gg~~a~~~a~~~-----------~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (192)
T 1uxo_A 58 LYQHTL--HENTYLVAHSLGCPAILRFLEHL-----------QLRAALGGIILVSGFAKSLPTLQMLDEFTQGSFDHQKI 124 (192)
T ss_dssp TTGGGC--CTTEEEEEETTHHHHHHHHHHTC-----------CCSSCEEEEEEETCCSSCCTTCGGGGGGTCSCCCHHHH
T ss_pred HHHHhc--cCCEEEEEeCccHHHHHHHHHHh-----------cccCCccEEEEeccCCCccccchhhhhhhhcCCCHHHH
Confidence 777765 34999999999999999999854 77 89999999987654322211 1110 111233
Q ss_pred hhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHH---HHHHHHHHHHhcCc
Q 025121 185 RAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKE---MDEVCNWLTARLGL 252 (257)
Q Consensus 185 ~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~---~~~~~~~l~~~l~~ 252 (257)
..+.+|+++++|++|.++|.+.++.+.+.+ . .++++++++||.+..+. +..+.+||.+++..
T Consensus 125 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~-----~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~l~~ 189 (192)
T 1uxo_A 125 IESAKHRAVIASKDDQIVPFSFSKDLAQQI-D-----AALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFSK 189 (192)
T ss_dssp HHHEEEEEEEEETTCSSSCHHHHHHHHHHT-T-----CEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHHC
T ss_pred HhhcCCEEEEecCCCCcCCHHHHHHHHHhc-C-----ceEEEeCCCcCcccccccccHHHHHHHHHHHHHH
Confidence 456779999999999999999998888887 2 37899999999987443 45678888887754
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.4e-24 Score=170.41 Aligned_cols=184 Identities=16% Similarity=0.168 Sum_probs=136.0
Q ss_pred CCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025121 31 GKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
++..|+|||+||++++...|..++..| ||.|+++|+||+|.+... .....++.+.++++.
T Consensus 78 g~~~~~vv~~hG~~~~~~~~~~~~~~l---g~~Vi~~D~~G~G~S~~~-----------------~~~~~~~~~~a~dl~ 137 (330)
T 3p2m_A 78 GGSAPRVIFLHGGGQNAHTWDTVIVGL---GEPALAVDLPGHGHSAWR-----------------EDGNYSPQLNSETLA 137 (330)
T ss_dssp SSSCCSEEEECCTTCCGGGGHHHHHHS---CCCEEEECCTTSTTSCCC-----------------SSCBCCHHHHHHHHH
T ss_pred CCCCCeEEEECCCCCccchHHHHHHHc---CCeEEEEcCCCCCCCCCC-----------------CCCCCCHHHHHHHHH
Confidence 345678999999999999999999888 899999999987644311 111234456666666
Q ss_pred HHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc---------------------
Q 025121 111 NLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--------------------- 169 (257)
Q Consensus 111 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------------------- 169 (257)
.+++..... +++|+||||||.+++.++.+. |++++++|++++.....
T Consensus 138 ~~l~~l~~~-~v~lvGhS~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (330)
T 3p2m_A 138 PVLRELAPG-AEFVVGMSLGGLTAIRLAAMA-----------PDLVGELVLVDVTPSALQRHAELTAEQRGTVALMHGER 205 (330)
T ss_dssp HHHHHSSTT-CCEEEEETHHHHHHHHHHHHC-----------TTTCSEEEEESCCHHHHHHHHHHTCC-----------C
T ss_pred HHHHHhCCC-CcEEEEECHhHHHHHHHHHhC-----------hhhcceEEEEcCCCccchhhhhhhhhhhhhhhhhcCCc
Confidence 666665444 899999999999999999964 88999999997632100
Q ss_pred --hhhhhcc--------------------------------------cc-----chHHHhhhcCCCEEEEccCCCCcccc
Q 025121 170 --RNLRNKI--------------------------------------EG-----SHEAARRAASLPILLTHGLCDDVVPY 204 (257)
Q Consensus 170 --~~~~~~~--------------------------------------~~-----~~~~~~~~~~~P~l~~~G~~D~~v~~ 204 (257)
..+.... .. ........+++|+++++|++|.++|.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~ 285 (330)
T 3p2m_A 206 EFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFVTD 285 (330)
T ss_dssp CBSCHHHHHHHHHHHCTTSCHHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHHCCSCEEEEEETTCCSSCH
T ss_pred cccCHHHHHHHHHhcCCCCCHHHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhhCCCCEEEEEeCCCCCCCH
Confidence 0000000 00 00123456799999999999999999
Q ss_pred hhhHHHHHHhhhcCceeeE-EEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 205 KYGEKSANCLSISGFRHLT-FKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 205 ~~~~~~~~~l~~~~~~~~~-~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
+.++.+.+.++ +.+ +++++++||.+..+..+.+.+.|.+++.
T Consensus 286 ~~~~~l~~~~~-----~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 328 (330)
T 3p2m_A 286 QDTAELHRRAT-----HFRGVHIVEKSGHSVQSDQPRALIEIVRGVLD 328 (330)
T ss_dssp HHHHHHHHHCS-----SEEEEEEETTCCSCHHHHCHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCC-----CCeeEEEeCCCCCCcchhCHHHHHHHHHHHHh
Confidence 99999998886 567 9999999999987777777777776664
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.4e-24 Score=163.06 Aligned_cols=191 Identities=15% Similarity=0.101 Sum_probs=133.3
Q ss_pred CCceEEEEEccCCCCccchHH--HhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQ--LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~--~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
++.|+|||+||++++...|.. +.+.+...||.|+++|+||+|.+... .....+.+.++++
T Consensus 35 ~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~------------------~~~~~~~~~~~d~ 96 (270)
T 3llc_A 35 DERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASGGA------------------FRDGTISRWLEEA 96 (270)
T ss_dssp TTSCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEECCTTSTTCCSC------------------GGGCCHHHHHHHH
T ss_pred CCCCeEEEECCCccccccchHHHHHHHHHhCCCcEEEeccccCCCCCCc------------------cccccHHHHHHHH
Confidence 447899999999998776543 67777668999999999987644211 1122344445555
Q ss_pred HHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcc---cccceEEEeccCCCCchhhhh-cc---------
Q 025121 110 ANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYY---VNLRAVVGLSGWLPGSRNLRN-KI--------- 176 (257)
Q Consensus 110 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~-~~--------- 176 (257)
.++++.... .+++|+|||+||.+++.++.+.. .++ .+++++|++++.......... .+
T Consensus 97 ~~~~~~l~~-~~~~l~G~S~Gg~~a~~~a~~~~--------~~p~~~~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (270)
T 3llc_A 97 LAVLDHFKP-EKAILVGSSMGGWIALRLIQELK--------ARHDNPTQVSGMVLIAPAPDFTSDLIEPLLGDRERAELA 167 (270)
T ss_dssp HHHHHHHCC-SEEEEEEETHHHHHHHHHHHHHH--------TCSCCSCEEEEEEEESCCTTHHHHTTGGGCCHHHHHHHH
T ss_pred HHHHHHhcc-CCeEEEEeChHHHHHHHHHHHHH--------hccccccccceeEEecCcccchhhhhhhhhhhhhhhhhh
Confidence 555544333 39999999999999999999500 037 799999999986543221100 00
Q ss_pred -----------c-----cc-----------hHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecC
Q 025121 177 -----------E-----GS-----------HEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEG 229 (257)
Q Consensus 177 -----------~-----~~-----------~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g 229 (257)
. .. .......+++|+++++|++|.++|.+.++.+.+.++.. +++++++++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~~---~~~~~~~~~ 244 (270)
T 3llc_A 168 ENGYFEEVSEYSPEPNIFTRALMEDGRANRVMAGMIDTGCPVHILQGMADPDVPYQHALKLVEHLPAD---DVVLTLVRD 244 (270)
T ss_dssp HHSEEEECCTTCSSCEEEEHHHHHHHHHTCCTTSCCCCCSCEEEEEETTCSSSCHHHHHHHHHTSCSS---SEEEEEETT
T ss_pred ccCcccChhhcccchhHHHHHHHhhhhhhhhhhhhhcCCCCEEEEecCCCCCCCHHHHHHHHHhcCCC---CeeEEEeCC
Confidence 0 00 00122456889999999999999999999999988742 479999999
Q ss_pred CCCccC-HHHHHHHHHHHHHhcCc
Q 025121 230 LGHYTV-PKEMDEVCNWLTARLGL 252 (257)
Q Consensus 230 ~~H~~~-~~~~~~~~~~l~~~l~~ 252 (257)
++|.+. .+..+.+.+++.+++..
T Consensus 245 ~gH~~~~~~~~~~~~~~i~~fl~~ 268 (270)
T 3llc_A 245 GDHRLSRPQDIDRMRNAIRAMIEP 268 (270)
T ss_dssp CCSSCCSHHHHHHHHHHHHHHHC-
T ss_pred CcccccccccHHHHHHHHHHHhcC
Confidence 999765 56677777777777653
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.4e-25 Score=175.68 Aligned_cols=183 Identities=9% Similarity=0.043 Sum_probs=131.3
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.|+|||+||++++...|..++..|++.||+|+++|+||+|.+.... .....++...++++.+++
T Consensus 47 g~~vvllHG~~~~~~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~----------------~~~~y~~~~~a~dl~~ll 110 (310)
T 1b6g_A 47 EDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPV----------------DEEDYTFEFHRNFLLALI 110 (310)
T ss_dssp SCEEEECCCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEES----------------CGGGCCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchhhHHHHHHHHHhCCCeEEEeCCCCCCCCCCCC----------------CcCCcCHHHHHHHHHHHH
Confidence 5789999999999999999999998778999999999887553211 011234566677777777
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCC---CC----------ch-----hhh--
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWL---PG----------SR-----NLR-- 173 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~----------~~-----~~~-- 173 (257)
+..... +++|+||||||.+++.+|.++ |++++++|++++.. +. .. ...
T Consensus 111 ~~l~~~-~~~lvGhS~Gg~va~~~A~~~-----------P~rv~~Lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (310)
T 1b6g_A 111 ERLDLR-NITLVVQDWGGFLGLTLPMAD-----------PSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPADGFTAWKYD 178 (310)
T ss_dssp HHHTCC-SEEEEECTHHHHHHTTSGGGS-----------GGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHHHHHHH
T ss_pred HHcCCC-CEEEEEcChHHHHHHHHHHhC-----------hHhheEEEEeccccccCCccccchhhhhhccchHHHHHHHH
Confidence 665444 899999999999999999954 89999999887643 11 00 000
Q ss_pred -----------------hcc------------ccc--------------------------hHHHhh-hcCCCEEEEccC
Q 025121 174 -----------------NKI------------EGS--------------------------HEAARR-AASLPILLTHGL 197 (257)
Q Consensus 174 -----------------~~~------------~~~--------------------------~~~~~~-~~~~P~l~~~G~ 197 (257)
..+ ... ...... .+++|+|+++|+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~ 258 (310)
T 1b6g_A 179 LVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAISFWQNDWNGQTFMAIGM 258 (310)
T ss_dssp HHSCSSCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEEEEEEET
T ss_pred hccCchhhhhhHHhhcCCCCCHHHHHHHhcccCCccchHHHHHHHHHhcccccchhhhhhhHhhhhhccccCceEEEecc
Confidence 000 000 001123 689999999999
Q ss_pred CCCcccchhhHHHHHHhhhcCceeeEEEEe--cCCCCccCHHHHHHHHHHHHHhcC
Q 025121 198 CDDVVPYKYGEKSANCLSISGFRHLTFKSF--EGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 198 ~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~--~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
+|.++| +.++.+.+.++. .+++++ +++||..+. ..+.+.+.|.+++.
T Consensus 259 ~D~~~~-~~~~~~~~~ip~-----~~~~~i~~~~~GH~~~~-~p~~~~~~i~~Fl~ 307 (310)
T 1b6g_A 259 KDKLLG-PDVMYPMKALIN-----GCPEPLEIADAGHFVQE-FGEQVAREALKHFA 307 (310)
T ss_dssp TCSSSS-HHHHHHHHHHST-----TCCCCEEETTCCSCGGG-GHHHHHHHHHHHHH
T ss_pred Ccchhh-hHHHHHHHhccc-----ccceeeecCCcccchhh-ChHHHHHHHHHHHh
Confidence 999999 888888888874 355555 999999887 76666666555553
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-24 Score=169.56 Aligned_cols=184 Identities=18% Similarity=0.191 Sum_probs=129.6
Q ss_pred ceEEEEEccCC---CCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025121 34 QATIVWLHGLG---DNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 34 ~~~vi~~HG~~---~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
.++|||+||++ ++...|..++..|++ +|+|+++|+||+|.+. .. ....++.+.++++.
T Consensus 36 g~~vvllHG~~~~~~~~~~~~~~~~~L~~-~~~vi~~Dl~G~G~S~-~~-----------------~~~~~~~~~~~dl~ 96 (296)
T 1j1i_A 36 GQPVILIHGGGAGAESEGNWRNVIPILAR-HYRVIAMDMLGFGKTA-KP-----------------DIEYTQDRRIRHLH 96 (296)
T ss_dssp SSEEEEECCCSTTCCHHHHHTTTHHHHTT-TSEEEEECCTTSTTSC-CC-----------------SSCCCHHHHHHHHH
T ss_pred CCeEEEECCCCCCcchHHHHHHHHHHHhh-cCEEEEECCCCCCCCC-CC-----------------CCCCCHHHHHHHHH
Confidence 46899999998 666778888888874 4999999999886543 11 00224456667777
Q ss_pred HHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch----------------hhhh
Q 025121 111 NLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR----------------NLRN 174 (257)
Q Consensus 111 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----------------~~~~ 174 (257)
++++.....++++|+||||||.+++.++.+. |++++++|++++...... .+..
T Consensus 97 ~~l~~l~~~~~~~lvGhS~Gg~ia~~~A~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (296)
T 1j1i_A 97 DFIKAMNFDGKVSIVGNSMGGATGLGVSVLH-----------SELVNALVLMGSAGLVVEIHEDLRPIINYDFTREGMVH 165 (296)
T ss_dssp HHHHHSCCSSCEEEEEEHHHHHHHHHHHHHC-----------GGGEEEEEEESCCBCCCC----------CCSCHHHHHH
T ss_pred HHHHhcCCCCCeEEEEEChhHHHHHHHHHhC-----------hHhhhEEEEECCCCCCCCCCchHHHHhcccCCchHHHH
Confidence 7777665424899999999999999999964 888999998876431100 0000
Q ss_pred -------------------cccc------------------------chHHHhhhcCCCEEEEccCCCCcccchhhHHHH
Q 025121 175 -------------------KIEG------------------------SHEAARRAASLPILLTHGLCDDVVPYKYGEKSA 211 (257)
Q Consensus 175 -------------------~~~~------------------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~ 211 (257)
.... ........+++|+++++|++|.++|.+.++.+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~~~~~~~~~~ 245 (296)
T 1j1i_A 166 LVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFL 245 (296)
T ss_dssp HHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHH
T ss_pred HHHHhccCcccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEECCCcccCHHHHHHHH
Confidence 0000 000123456899999999999999999999888
Q ss_pred HHhhhcCceeeEEEEecCCCCccCHHH----HHHHHHHHHHhcCc
Q 025121 212 NCLSISGFRHLTFKSFEGLGHYTVPKE----MDEVCNWLTARLGL 252 (257)
Q Consensus 212 ~~l~~~~~~~~~~~~~~g~~H~~~~~~----~~~~~~~l~~~l~~ 252 (257)
+.++ +.++++++++||.+..+. .+.+.+||.+.+..
T Consensus 246 ~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~~~~ 285 (296)
T 1j1i_A 246 DLID-----DSWGYIIPHCGHWAMIEHPEDFANATLSFLSLRVDI 285 (296)
T ss_dssp HHCT-----TEEEEEESSCCSCHHHHSHHHHHHHHHHHHHHC---
T ss_pred HHCC-----CCEEEEECCCCCCchhcCHHHHHHHHHHHHhccCCc
Confidence 8886 678999999999987443 45666777765543
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=170.87 Aligned_cols=185 Identities=12% Similarity=0.028 Sum_probs=132.6
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.++|||+||++++...|..++..|+..||+|+++|+||||.+.... .....++.+.++++.+++
T Consensus 46 g~~vvllHG~~~~~~~w~~~~~~L~~~g~rvia~Dl~G~G~S~~~~----------------~~~~~~~~~~a~dl~~ll 109 (297)
T 2xt0_A 46 EHTFLCLHGEPSWSFLYRKMLPVFTAAGGRVVAPDLFGFGRSDKPT----------------DDAVYTFGFHRRSLLAFL 109 (297)
T ss_dssp SCEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEES----------------CGGGCCHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCcceeHHHHHHHHHhCCcEEEEeCCCCCCCCCCCC----------------CcccCCHHHHHHHHHHHH
Confidence 5789999999999999999999998778999999999887543211 001234566666666666
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh-------h--------------
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN-------L-------------- 172 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------~-------------- 172 (257)
+..... +++|+||||||.+++.+|.++ |++++++|++++....... +
T Consensus 110 ~~l~~~-~~~lvGhS~Gg~va~~~A~~~-----------P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (297)
T 2xt0_A 110 DALQLE-RVTLVCQDWGGILGLTLPVDR-----------PQLVDRLIVMNTALAVGLSPGKGFESWRDFVANSPDLDVGK 177 (297)
T ss_dssp HHHTCC-SEEEEECHHHHHHHTTHHHHC-----------TTSEEEEEEESCCCCSSSCSCHHHHHHHHHHHTCTTCCHHH
T ss_pred HHhCCC-CEEEEEECchHHHHHHHHHhC-----------hHHhcEEEEECCCCCcccCCchhHHHHHHHhhcccccchhH
Confidence 665444 899999999999999999964 8899999988764311000 0
Q ss_pred --h---hc------------cccc---------------------------hHHHhh-hcCCCEEEEccCCCCcccchhh
Q 025121 173 --R---NK------------IEGS---------------------------HEAARR-AASLPILLTHGLCDDVVPYKYG 207 (257)
Q Consensus 173 --~---~~------------~~~~---------------------------~~~~~~-~~~~P~l~~~G~~D~~v~~~~~ 207 (257)
. .. .... ...... .+++|+|+++|++|.++| +..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~~~~-~~~ 256 (297)
T 2xt0_A 178 LMQRAIPGITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSGPTFMAVGAQDPVLG-PEV 256 (297)
T ss_dssp HHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTCCSCEEEEEETTCSSSS-HHH
T ss_pred HHhccCccCCHHHHHHHhccccCcchhHHHHHHHHhCccccccchhhHHHHHHHHhhhccCCCeEEEEeCCCcccC-hHH
Confidence 0 00 0000 001223 679999999999999999 788
Q ss_pred HHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 208 EKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 208 ~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
+.+.+.++.. ....+.++++||..+. ..+.+.+.|.+++.
T Consensus 257 ~~~~~~~p~~---~~~~~~~~~~GH~~~~-~p~~~~~~i~~fl~ 296 (297)
T 2xt0_A 257 MGMLRQAIRG---CPEPMIVEAGGHFVQE-HGEPIARAALAAFG 296 (297)
T ss_dssp HHHHHHHSTT---CCCCEEETTCCSSGGG-GCHHHHHHHHHHTT
T ss_pred HHHHHhCCCC---eeEEeccCCCCcCccc-CHHHHHHHHHHHHh
Confidence 8888888744 3344457899999887 77777777766653
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-25 Score=172.19 Aligned_cols=190 Identities=14% Similarity=0.165 Sum_probs=130.3
Q ss_pred CCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 30 KGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 30 ~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
.+...|+|||+||++++...|..+++.|...||.|+++|+||+|.+..... .....++.+.++++
T Consensus 20 ~~~~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~---------------~~~~~~~~~~~~~~ 84 (279)
T 4g9e_A 20 SEGEGAPLLMIHGNSSSGAIFAPQLEGEIGKKWRVIAPDLPGHGKSTDAID---------------PDRSYSMEGYADAM 84 (279)
T ss_dssp CCCCEEEEEEECCTTCCGGGGHHHHHSHHHHHEEEEEECCTTSTTSCCCSC---------------HHHHSSHHHHHHHH
T ss_pred cCCCCCeEEEECCCCCchhHHHHHHhHHHhcCCeEEeecCCCCCCCCCCCC---------------cccCCCHHHHHHHH
Confidence 345678999999999999999999999555899999999998765432110 11123455666666
Q ss_pred HHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc-------------
Q 025121 110 ANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI------------- 176 (257)
Q Consensus 110 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~------------- 176 (257)
.++++..... +++|+|||+||.+++.++.+. |+ +.+++++++............
T Consensus 85 ~~~~~~~~~~-~~~lvG~S~Gg~~a~~~a~~~-----------p~-~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (279)
T 4g9e_A 85 TEVMQQLGIA-DAVVFGWSLGGHIGIEMIARY-----------PE-MRGLMITGTPPVAREEVGQGFKSGPDMALAGQEI 151 (279)
T ss_dssp HHHHHHHTCC-CCEEEEETHHHHHHHHHTTTC-----------TT-CCEEEEESCCCCCGGGHHHHBCCSTTGGGGGCSC
T ss_pred HHHHHHhCCC-ceEEEEECchHHHHHHHHhhC-----------Cc-ceeEEEecCCCCCCCccchhhccchhhhhcCccc
Confidence 6666654333 899999999999999999853 66 777777765432221100000
Q ss_pred ---------------------------------------------ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHH
Q 025121 177 ---------------------------------------------EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSA 211 (257)
Q Consensus 177 ---------------------------------------------~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~ 211 (257)
..........+++|+++++|++|.++|.+..+.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~ 231 (279)
T 4g9e_A 152 FSERDVESYARSTCGEPFEASLLDIVARTDGRARRIMFEKFGSGTGGNQRDIVAEAQLPIAVVNGRDEPFVELDFVSKVK 231 (279)
T ss_dssp CCHHHHHHHHHHHHCSSCCHHHHHHHHHSCHHHHHHHHHHHHHTCBCCHHHHHHHCCSCEEEEEETTCSSBCHHHHTTCC
T ss_pred ccHHHHHHHHHhhccCcccHHHHHHHHhhhccchHHHHHHhhccCCchHHHHHHhcCCCEEEEEcCCCcccchHHHHHHh
Confidence 00011124567899999999999999988776665
Q ss_pred -HHhhhcCceeeEEEEecCCCCccCHHH----HHHHHHHHHHhcCc
Q 025121 212 -NCLSISGFRHLTFKSFEGLGHYTVPKE----MDEVCNWLTARLGL 252 (257)
Q Consensus 212 -~~l~~~~~~~~~~~~~~g~~H~~~~~~----~~~~~~~l~~~l~~ 252 (257)
+.++ ++++++++++||.+..+. .+.+.+||.+.-..
T Consensus 232 ~~~~~-----~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~~~~~~ 272 (279)
T 4g9e_A 232 FGNLW-----EGKTHVIDNAGHAPFREAPAEFDAYLARFIRDCTQL 272 (279)
T ss_dssp CSSBG-----GGSCEEETTCCSCHHHHSHHHHHHHHHHHHHHHHSS
T ss_pred hccCC-----CCeEEEECCCCcchHHhCHHHHHHHHHHHHHHhhhh
Confidence 4443 678999999999987444 45566666665443
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=99.92 E-value=5.7e-24 Score=165.91 Aligned_cols=182 Identities=19% Similarity=0.148 Sum_probs=130.0
Q ss_pred ceEEEEEccCC---CCccchHHHh-hcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 34 QATIVWLHGLG---DNGSSWSQLL-ESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 34 ~~~vi~~HG~~---~~~~~~~~~~-~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
.++|||+||++ ++...|..++ ..|++ .|+|+++|+||+|.+.... ....++.+.++++
T Consensus 33 g~~vvllHG~~~~~~~~~~w~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~-----------------~~~~~~~~~a~dl 94 (286)
T 2puj_A 33 GETVIMLHGGGPGAGGWSNYYRNVGPFVDA-GYRVILKDSPGFNKSDAVV-----------------MDEQRGLVNARAV 94 (286)
T ss_dssp SSEEEEECCCSTTCCHHHHHTTTHHHHHHT-TCEEEEECCTTSTTSCCCC-----------------CSSCHHHHHHHHH
T ss_pred CCcEEEECCCCCCCCcHHHHHHHHHHHHhc-cCEEEEECCCCCCCCCCCC-----------------CcCcCHHHHHHHH
Confidence 46899999998 7777888888 88874 5999999999886543211 0123556667777
Q ss_pred HHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc--------hhh---------
Q 025121 110 ANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--------RNL--------- 172 (257)
Q Consensus 110 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------~~~--------- 172 (257)
.++++..... +++|+||||||.+++.+|.++ |++++++|++++..... ...
T Consensus 95 ~~~l~~l~~~-~~~lvGhS~GG~va~~~A~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (286)
T 2puj_A 95 KGLMDALDID-RAHLVGNAMGGATALNFALEY-----------PDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAE 162 (286)
T ss_dssp HHHHHHTTCC-CEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHS
T ss_pred HHHHHHhCCC-ceEEEEECHHHHHHHHHHHhC-----------hHhhheEEEECccccCCCcccccchhhHHHHHHHhhC
Confidence 7777766544 999999999999999999964 88999999887643210 000
Q ss_pred ------hh-------------------ccc---cc--------------------hHHHhhhcCCCEEEEccCCCCcccc
Q 025121 173 ------RN-------------------KIE---GS--------------------HEAARRAASLPILLTHGLCDDVVPY 204 (257)
Q Consensus 173 ------~~-------------------~~~---~~--------------------~~~~~~~~~~P~l~~~G~~D~~v~~ 204 (257)
.. ... .. .......+++|+|+++|++|.++|.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~ 242 (286)
T 2puj_A 163 PSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPL 242 (286)
T ss_dssp CCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCT
T ss_pred CcHHHHHHHHHHHhcCCccCCHHHHHHHHHHhhcCHHHHHHHHHHHhhhhccccchhhHHhhcCCCEEEEEECCCCccCH
Confidence 00 000 00 0012234689999999999999999
Q ss_pred hhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 205 KYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 205 ~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
+.++.+.+.++ +.++++++++||..+.+..+.+.+.+.+++
T Consensus 243 ~~~~~~~~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 283 (286)
T 2puj_A 243 DHGLKLLWNID-----DARLHVFSKCGAWAQWEHADEFNRLVIDFL 283 (286)
T ss_dssp HHHHHHHHHSS-----SEEEEEESSCCSCHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHCC-----CCeEEEeCCCCCCccccCHHHHHHHHHHHH
Confidence 99998988886 679999999999988665554444444433
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.92 E-value=5.3e-25 Score=163.72 Aligned_cols=179 Identities=17% Similarity=0.107 Sum_probs=124.9
Q ss_pred CCCCCCceEEEEEccCCCCccchHH--HhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025121 28 RPKGKHQATIVWLHGLGDNGSSWSQ--LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 28 ~~~~~~~~~vi~~HG~~~~~~~~~~--~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
++.+++.|+||++||++++...|.. +++.|++.||.|+++|+|++|.+...... +.. .... ..++
T Consensus 26 p~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~----~~~-------~~~~--~~~~ 92 (210)
T 1imj_A 26 PGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAP----API-------GELA--PGSF 92 (210)
T ss_dssp CSSSCCSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCS----SCT-------TSCC--CTHH
T ss_pred CCCCCCCceEEEECCCCCccceeecchhHHHHHHCCCeEEEecCCCCCCCCCCCCc----chh-------hhcc--hHHH
Confidence 3445578899999999999999988 58888888999999999987654322100 000 0000 0122
Q ss_pred HHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhh
Q 025121 106 AAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARR 185 (257)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (257)
+..+.+.+. . ++++++|||+||.+++.++.+ +++++++++++++...... ......
T Consensus 93 ~~~~~~~~~---~-~~~~l~G~S~Gg~~a~~~a~~-----------~~~~v~~~v~~~~~~~~~~---------~~~~~~ 148 (210)
T 1imj_A 93 LAAVVDALE---L-GPPVVISPSLSGMYSLPFLTA-----------PGSQLPGFVPVAPICTDKI---------NAANYA 148 (210)
T ss_dssp HHHHHHHHT---C-CSCEEEEEGGGHHHHHHHHTS-----------TTCCCSEEEEESCSCGGGS---------CHHHHH
T ss_pred HHHHHHHhC---C-CCeEEEEECchHHHHHHHHHh-----------CccccceEEEeCCCccccc---------cchhhh
Confidence 333333332 2 389999999999999999984 4788999999998754321 122345
Q ss_pred hcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 186 AASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 186 ~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
.+++|+++++|++|. ++.+..+.+ +.++ +.+++++++++|.+..+..+.+.+.+.+++
T Consensus 149 ~~~~p~l~i~g~~D~-~~~~~~~~~-~~~~-----~~~~~~~~~~~H~~~~~~~~~~~~~i~~fl 206 (210)
T 1imj_A 149 SVKTPALIVYGDQDP-MGQTSFEHL-KQLP-----NHRVLIMKGAGHPCYLDKPEEWHTGLLDFL 206 (210)
T ss_dssp TCCSCEEEEEETTCH-HHHHHHHHH-TTSS-----SEEEEEETTCCTTHHHHCHHHHHHHHHHHH
T ss_pred hCCCCEEEEEcCccc-CCHHHHHHH-hhCC-----CCCEEEecCCCcchhhcCHHHHHHHHHHHH
Confidence 678999999999999 998887777 5554 679999999999977554444444444433
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.7e-24 Score=167.56 Aligned_cols=184 Identities=20% Similarity=0.213 Sum_probs=127.4
Q ss_pred CCceEEEEEccCC---CCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH---
Q 025121 32 KHQATIVWLHGLG---DNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS--- 105 (257)
Q Consensus 32 ~~~~~vi~~HG~~---~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~--- 105 (257)
+..|+|||+||++ ++...|..+++.|++ +|+|+++|+||+|.+.... ....++.+.
T Consensus 27 ~g~p~vvllHG~~~~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~-----------------~~~~~~~~~~~~ 88 (285)
T 1c4x_A 27 PQSPAVVLLHGAGPGAHAASNWRPIIPDLAE-NFFVVAPDLIGFGQSEYPE-----------------TYPGHIMSWVGM 88 (285)
T ss_dssp TTSCEEEEECCCSTTCCHHHHHGGGHHHHHT-TSEEEEECCTTSTTSCCCS-----------------SCCSSHHHHHHH
T ss_pred CCCCEEEEEeCCCCCCcchhhHHHHHHHHhh-CcEEEEecCCCCCCCCCCC-----------------Ccccchhhhhhh
Confidence 3445699999998 666778888888874 5999999999887543211 001233444
Q ss_pred -HHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh-------------
Q 025121 106 -AAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN------------- 171 (257)
Q Consensus 106 -~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------------- 171 (257)
++++.++++..... +++|+||||||.+++.++.+. |+++++++++++.......
T Consensus 89 ~~~dl~~~l~~l~~~-~~~lvGhS~Gg~va~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 156 (285)
T 1c4x_A 89 RVEQILGLMNHFGIE-KSHIVGNSMGGAVTLQLVVEA-----------PERFDKVALMGSVGAPMNARPPELARLLAFYA 156 (285)
T ss_dssp HHHHHHHHHHHHTCS-SEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESCCSSCCSSCCHHHHHHHTGGG
T ss_pred HHHHHHHHHHHhCCC-ccEEEEEChHHHHHHHHHHhC-----------hHHhheEEEeccCCCCCCccchhHHHHHHHhc
Confidence 66666666554433 899999999999999999964 8899999988764321000
Q ss_pred --------------------h--h-h----ccc---c-----------------c-----hHHHhhhcCCCEEEEccCCC
Q 025121 172 --------------------L--R-N----KIE---G-----------------S-----HEAARRAASLPILLTHGLCD 199 (257)
Q Consensus 172 --------------------~--~-~----~~~---~-----------------~-----~~~~~~~~~~P~l~~~G~~D 199 (257)
. . . ... . . .......+++|+++++|++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 236 (285)
T 1c4x_A 157 DPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQD 236 (285)
T ss_dssp SCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTC
T ss_pred cccHHHHHHHHHHhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhhhccCCCCEEEEEeCCC
Confidence 0 0 0 000 0 0 00122456899999999999
Q ss_pred CcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 200 DVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 200 ~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
.++|.+.++.+.+.++ +.++++++++||.++.+..+.+.+.+.+++
T Consensus 237 ~~~p~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 282 (285)
T 1c4x_A 237 RIVPLDTSLYLTKHLK-----HAELVVLDRCGHWAQLERWDAMGPMLMEHF 282 (285)
T ss_dssp SSSCTHHHHHHHHHCS-----SEEEEEESSCCSCHHHHSHHHHHHHHHHHH
T ss_pred eeeCHHHHHHHHHhCC-----CceEEEeCCCCcchhhcCHHHHHHHHHHHH
Confidence 9999999988888886 679999999999988665555555554444
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.1e-23 Score=156.21 Aligned_cols=176 Identities=13% Similarity=0.081 Sum_probs=126.6
Q ss_pred CCceEEEEEccCC---CC--ccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025121 32 KHQATIVWLHGLG---DN--GSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 32 ~~~~~vi~~HG~~---~~--~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
+++|+||++||++ +. ...|..+++.|++.||.|+++|+|++|.+...- .......+++
T Consensus 35 ~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~-----------------~~~~~~~~d~ 97 (220)
T 2fuk_A 35 VQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGSF-----------------DHGDGEQDDL 97 (220)
T ss_dssp CCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSCC-----------------CTTTHHHHHH
T ss_pred cccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCCCCc-----------------ccCchhHHHH
Confidence 4489999999953 32 233678888998889999999999765432110 0112223333
Q ss_pred HHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhhh
Q 025121 107 AHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRA 186 (257)
Q Consensus 107 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (257)
..+.+.+.......+++++|||+||.+++.++.+ . ++++++++++...... +.. ..
T Consensus 98 ~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~------------~-~v~~~v~~~~~~~~~~-----~~~------~~ 153 (220)
T 2fuk_A 98 RAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAA------------L-EPQVLISIAPPAGRWD-----FSD------VQ 153 (220)
T ss_dssp HHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHH------------H-CCSEEEEESCCBTTBC-----CTT------CC
T ss_pred HHHHHHHHhcCCCCcEEEEEECHHHHHHHHHHhh------------c-cccEEEEecccccchh-----hhh------cc
Confidence 3333444333334599999999999999999984 2 8999999998766543 000 12
Q ss_pred cCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCH---HHHHHHHHHHHHhcCc
Q 025121 187 ASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVP---KEMDEVCNWLTARLGL 252 (257)
Q Consensus 187 ~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~---~~~~~~~~~l~~~l~~ 252 (257)
...|+++++|++|.++|.+.++.+.+.++. +++++++++++|.+.. +..+.+.+|+.+++..
T Consensus 154 ~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~~~H~~~~~~~~~~~~i~~~l~~~l~~ 218 (220)
T 2fuk_A 154 PPAQWLVIQGDADEIVDPQAVYDWLETLEQ----QPTLVRMPDTSHFFHRKLIDLRGALQHGVRRWLPA 218 (220)
T ss_dssp CCSSEEEEEETTCSSSCHHHHHHHHTTCSS----CCEEEEETTCCTTCTTCHHHHHHHHHHHHGGGCSS
T ss_pred cCCcEEEEECCCCcccCHHHHHHHHHHhCc----CCcEEEeCCCCceehhhHHHHHHHHHHHHHHHhhc
Confidence 267999999999999999999888888842 6799999999999873 3467888888888764
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-24 Score=165.42 Aligned_cols=176 Identities=22% Similarity=0.149 Sum_probs=124.5
Q ss_pred EEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhcc
Q 025121 36 TIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLST 115 (257)
Q Consensus 36 ~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (257)
+|||+||++++...|..++..|+ .+|+|+++|+||+|.+... ...++.+.++++.+.+.
T Consensus 15 ~vvllHG~~~~~~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~-------------------~~~~~~~~~~~l~~~l~- 73 (258)
T 1m33_A 15 HLVLLHGWGLNAEVWRCIDEELS-SHFTLHLVDLPGFGRSRGF-------------------GALSLADMAEAVLQQAP- 73 (258)
T ss_dssp EEEEECCTTCCGGGGGGTHHHHH-TTSEEEEECCTTSTTCCSC-------------------CCCCHHHHHHHHHTTSC-
T ss_pred eEEEECCCCCChHHHHHHHHHhh-cCcEEEEeeCCCCCCCCCC-------------------CCcCHHHHHHHHHHHhC-
Confidence 89999999999999999999887 5899999999988754321 01234445555544433
Q ss_pred CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc--h-----------hhh---------
Q 025121 116 EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--R-----------NLR--------- 173 (257)
Q Consensus 116 ~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~-----------~~~--------- 173 (257)
++++|+||||||.+++.++.++ |++++++|++++..... . .+.
T Consensus 74 ----~~~~lvGhS~Gg~va~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (258)
T 1m33_A 74 ----DKAIWLGWSLGGLVASQIALTH-----------PERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQR 138 (258)
T ss_dssp ----SSEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHH
T ss_pred ----CCeEEEEECHHHHHHHHHHHHh-----------hHhhceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHH
Confidence 4899999999999999999964 88999999886532100 0 000
Q ss_pred ---hcc-----c-------------------cc-h---------------HHHhhhcCCCEEEEccCCCCcccchhhHHH
Q 025121 174 ---NKI-----E-------------------GS-H---------------EAARRAASLPILLTHGLCDDVVPYKYGEKS 210 (257)
Q Consensus 174 ---~~~-----~-------------------~~-~---------------~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~ 210 (257)
... . .. . ......+++|+++++|++|.++|.+.++.+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~ 218 (258)
T 1m33_A 139 TVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPML 218 (258)
T ss_dssp HHHHHHHTTSTTSTTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-C
T ss_pred HHHHHHHHHhcCCccchhhHHHHHHHHHhccCCcHHHHHHHHHHHHhCCHHHHHhhCCCCEEEEeecCCCCCCHHHHHHH
Confidence 000 0 00 0 001235689999999999999998887777
Q ss_pred HHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcCc
Q 025121 211 ANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLGL 252 (257)
Q Consensus 211 ~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 252 (257)
.+.++ +.++++++++||..+.+..+.+.+.|.+++..
T Consensus 219 ~~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 255 (258)
T 1m33_A 219 DKLWP-----HSESYIFAKAAHAPFISHPAEFCHLLVALKQR 255 (258)
T ss_dssp TTTCT-----TCEEEEETTCCSCHHHHSHHHHHHHHHHHHTT
T ss_pred HHhCc-----cceEEEeCCCCCCccccCHHHHHHHHHHHHHh
Confidence 66665 66899999999998866666666666665543
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3.6e-24 Score=167.60 Aligned_cols=185 Identities=15% Similarity=0.134 Sum_probs=133.8
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
..|+|||+||++++...|..++..|+.. |.|+++|+||+|.+... ....++.+.++++.++
T Consensus 29 ~~~~vv~lHG~~~~~~~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~------------------~~~~~~~~~~~~l~~~ 89 (301)
T 3kda_A 29 QGPLVMLVHGFGQTWYEWHQLMPELAKR-FTVIAPDLPGLGQSEPP------------------KTGYSGEQVAVYLHKL 89 (301)
T ss_dssp SSSEEEEECCTTCCGGGGTTTHHHHTTT-SEEEEECCTTSTTCCCC------------------SSCSSHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcchhHHHHHHHHHHhc-CeEEEEcCCCCCCCCCC------------------CCCccHHHHHHHHHHH
Confidence 4579999999999999999999999866 99999999987654322 1122445556666666
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh-------------------
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR------------------- 173 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------------------- 173 (257)
++......+++|+||||||.+++.++.+. |++++++|++++..+......
T Consensus 90 l~~l~~~~p~~lvGhS~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (301)
T 3kda_A 90 ARQFSPDRPFDLVAHDIGIWNTYPMVVKN-----------QADIARLVYMEAPIPDARIYRFPAFTAQGESLVWHFSFFA 158 (301)
T ss_dssp HHHHCSSSCEEEEEETHHHHTTHHHHHHC-----------GGGEEEEEEESSCCSSGGGGGSBSEETTEECSSTHHHHHH
T ss_pred HHHcCCCccEEEEEeCccHHHHHHHHHhC-----------hhhccEEEEEccCCCCCCccchhhhcchhhhhhhhHHHhh
Confidence 65544442499999999999999999964 889999999987532111000
Q ss_pred ------hc-------------c----cc----chH------------------------------HH----hh--hcCCC
Q 025121 174 ------NK-------------I----EG----SHE------------------------------AA----RR--AASLP 190 (257)
Q Consensus 174 ------~~-------------~----~~----~~~------------------------------~~----~~--~~~~P 190 (257)
.. . .. ... .. .. .+++|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 238 (301)
T 3kda_A 159 ADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNESVRQNAELAKTRLQMPTM 238 (301)
T ss_dssp CSTTHHHHHHTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHTHHHHHHHHHHHTTSCBCSCEE
T ss_pred cCcchHHHHhccchHHHHHHHHHhccCCcccCCHHHHHHHHHHhccccccchHHHHHHhhccchhhcccchhhccccCcc
Confidence 00 0 00 000 00 01 67899
Q ss_pred EEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcCcCC
Q 025121 191 ILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLGLEG 254 (257)
Q Consensus 191 ~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~~~ 254 (257)
+++++|++| ++.+..+.+.+.++ ++++++++++||.++.+..+.+.+.|.+++....
T Consensus 239 ~l~i~G~~D--~~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~~~ 295 (301)
T 3kda_A 239 TLAGGGAGG--MGTFQLEQMKAYAE-----DVEGHVLPGCGHWLPEECAAPMNRLVIDFLSRGR 295 (301)
T ss_dssp EEEECSTTS--CTTHHHHHHHTTBS-----SEEEEEETTCCSCHHHHTHHHHHHHHHHHHTTSC
T ss_pred eEEEecCCC--CChhHHHHHHhhcc-----cCeEEEcCCCCcCchhhCHHHHHHHHHHHHhhCc
Confidence 999999999 66666677666654 7899999999999998888888888888776654
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-23 Score=163.78 Aligned_cols=183 Identities=18% Similarity=0.146 Sum_probs=133.0
Q ss_pred ceEEEEEccCC---CCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025121 34 QATIVWLHGLG---DNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 34 ~~~vi~~HG~~---~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
+|+|||+||++ ++...|..++..|++ .|+|+++|+||||.+.... ....++.+.++++.
T Consensus 36 ~~~vvllHG~~pg~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~-----------------~~~~~~~~~a~dl~ 97 (291)
T 2wue_A 36 DQTVVLLHGGGPGAASWTNFSRNIAVLAR-HFHVLAVDQPGYGHSDKRA-----------------EHGQFNRYAAMALK 97 (291)
T ss_dssp SSEEEEECCCCTTCCHHHHTTTTHHHHTT-TSEEEEECCTTSTTSCCCS-----------------CCSSHHHHHHHHHH
T ss_pred CCcEEEECCCCCccchHHHHHHHHHHHHh-cCEEEEECCCCCCCCCCCC-----------------CCCcCHHHHHHHHH
Confidence 35899999998 777788888888874 5999999999887543211 00234566667777
Q ss_pred HHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc--------hh-----------
Q 025121 111 NLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--------RN----------- 171 (257)
Q Consensus 111 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------~~----------- 171 (257)
++++..... +++|+||||||.+++.+|.+. |++++++|++++..... ..
T Consensus 98 ~~l~~l~~~-~~~lvGhS~Gg~ia~~~A~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (291)
T 2wue_A 98 GLFDQLGLG-RVPLVGNALGGGTAVRFALDY-----------PARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVAP 165 (291)
T ss_dssp HHHHHHTCC-SEEEEEETHHHHHHHHHHHHS-----------TTTEEEEEEESCSSSCCCSSSCSSCHHHHHHHHHHHSC
T ss_pred HHHHHhCCC-CeEEEEEChhHHHHHHHHHhC-----------hHhhcEEEEECCCCCCccccccccchhhHHHHHHhccC
Confidence 777655443 899999999999999999964 88999999887643210 00
Q ss_pred ----hhhc-------------------cc---c------------------c--hH--HHhhhcCCCEEEEccCCCCccc
Q 025121 172 ----LRNK-------------------IE---G------------------S--HE--AARRAASLPILLTHGLCDDVVP 203 (257)
Q Consensus 172 ----~~~~-------------------~~---~------------------~--~~--~~~~~~~~P~l~~~G~~D~~v~ 203 (257)
+... .. . . .. .....+++|+++++|++|.++|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~ 245 (291)
T 2wue_A 166 TRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVNP 245 (291)
T ss_dssp CHHHHHHHHHTSCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGGCCSCEEEEEETTCSSSC
T ss_pred CHHHHHHHHHHhccCcccCCHHHHHHHHHHhcCchHHHHHHHHHhhccccccccchhHHHHhhCCCCeEEEecCCCCCCC
Confidence 0000 00 0 0 00 1223468999999999999999
Q ss_pred chhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 204 YKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 204 ~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
.+.++.+.+.++ +.++++++++||..+.+..+.+.+.|.+++.
T Consensus 246 ~~~~~~~~~~~p-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 288 (291)
T 2wue_A 246 LDGALVALKTIP-----RAQLHVFGQCGHWVQVEKFDEFNKLTIEFLG 288 (291)
T ss_dssp GGGGHHHHHHST-----TEEEEEESSCCSCHHHHTHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCC-----CCeEEEeCCCCCChhhhCHHHHHHHHHHHHh
Confidence 999999988886 6799999999999987777777777777664
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-23 Score=170.95 Aligned_cols=199 Identities=17% Similarity=0.139 Sum_probs=131.5
Q ss_pred eEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHH
Q 025121 24 THVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLD 103 (257)
Q Consensus 24 ~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 103 (257)
.++.++...+.|+||++||.+++... .++..|+.+||.|+++|+++++..... ......+++.
T Consensus 148 ~l~~P~~~~~~P~Vv~~hG~~~~~~~--~~a~~La~~Gy~V~a~D~rG~g~~~~~---------------~~~~~~~d~~ 210 (422)
T 3k2i_A 148 TLFLPPGPGPFPGIIDIFGIGGGLLE--YRASLLAGHGFATLALAYYNFEDLPNN---------------MDNISLEYFE 210 (422)
T ss_dssp EEEECSSSCCBCEEEEECCTTCSCCC--HHHHHHHTTTCEEEEEECSSSTTSCSS---------------CSCEETHHHH
T ss_pred EEEcCCCCCCcCEEEEEcCCCcchhH--HHHHHHHhCCCEEEEEccCCCCCCCCC---------------cccCCHHHHH
Confidence 34444445678999999999876443 357778889999999999865321100 0011122333
Q ss_pred HHHHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh-----------
Q 025121 104 ASAAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN----------- 171 (257)
Q Consensus 104 ~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----------- 171 (257)
+.++. +.+... ...+++|+||||||.+++.++.+. ++ +++++++++.......
T Consensus 211 ~~~~~---l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~-----------p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~ 275 (422)
T 3k2i_A 211 EAVCY---MLQHPQVKGPGIGLLGISLGADICLSMASFL-----------KN-VSATVSINGSGISGNTAINYKHSSIPP 275 (422)
T ss_dssp HHHHH---HHTSTTBCCSSEEEEEETHHHHHHHHHHHHC-----------SS-EEEEEEESCCSBCCSSCEEETTEEECC
T ss_pred HHHHH---HHhCcCcCCCCEEEEEECHHHHHHHHHHhhC-----------cC-ccEEEEEcCcccccCCchhhcCCcCCC
Confidence 33332 232222 235999999999999999999863 54 8899888875421100
Q ss_pred -----------------hhhcccc-------chHHHhhhcCCCEEEEccCCCCcccchhh-HHHHHHhhhcCceeeEEEE
Q 025121 172 -----------------LRNKIEG-------SHEAARRAASLPILLTHGLCDDVVPYKYG-EKSANCLSISGFRHLTFKS 226 (257)
Q Consensus 172 -----------------~~~~~~~-------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~-~~~~~~l~~~~~~~~~~~~ 226 (257)
+...+.. ........+++|+|+++|++|.++|.+.. +.+.+.+++.+.+++++++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~ 355 (422)
T 3k2i_A 276 LGYDLRRIKVAFSGLVDIVDIRNALVGGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIIC 355 (422)
T ss_dssp CCBCGGGCEECTTSCEECTTCBCCCTTGGGSTTBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred cccchhhcccCcchhHHHHHHHhhhhhcccccccccHHHCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEE
Confidence 0000000 00112456789999999999999998855 6899999988773489999
Q ss_pred ecCCCCcc--------------------------------CHHHHHHHHHHHHHhcCcCC
Q 025121 227 FEGLGHYT--------------------------------VPKEMDEVCNWLTARLGLEG 254 (257)
Q Consensus 227 ~~g~~H~~--------------------------------~~~~~~~~~~~l~~~l~~~~ 254 (257)
++++||.+ ..+.++.+.+||++.+....
T Consensus 356 ~~gagH~~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L~~~~ 415 (422)
T 3k2i_A 356 YPGTGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGGTQ 415 (422)
T ss_dssp ETTCCSCCCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred ECCCCCEECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 99999997 13467899999999987653
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.91 E-value=6.6e-24 Score=165.19 Aligned_cols=188 Identities=12% Similarity=-0.001 Sum_probs=122.7
Q ss_pred CCCceEEEEEccCC---CCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025121 31 GKHQATIVWLHGLG---DNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 31 ~~~~~~vi~~HG~~---~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
+.+.|+|||+||.+ ++...|..+++.|++.||.|+++|+|+++.+. ........++.+.++
T Consensus 47 ~~~~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~~~~~----------------~~~~~~~~d~~~~~~ 110 (283)
T 3bjr_A 47 QTNLPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTLLTDQQ----------------PLGLAPVLDLGRAVN 110 (283)
T ss_dssp -CCEEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEECCCTTTCS----------------SCBTHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEeccCCCccc----------------cCchhHHHHHHHHHH
Confidence 35789999999944 45556888999998889999999988654220 001112333444444
Q ss_pred HHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccC--CCCCCCcccccceEEEeccCCCCchhhh-------hcc-
Q 025121 108 HIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGR--YGNGIPYYVNLRAVVGLSGWLPGSRNLR-------NKI- 176 (257)
Q Consensus 108 ~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~-------~~~- 176 (257)
.+.+..... ....+++|+||||||.+++.++.+.+..- ...-.....++++++++++.......+. ..+
T Consensus 111 ~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~ 190 (283)
T 3bjr_A 111 LLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVISPLLGFPKDDATLATWTP 190 (283)
T ss_dssp HHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCCCTTSBC--------CCCC
T ss_pred HHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCccccccccccccchHHHHHH
Confidence 444433221 22248999999999999999998641000 0000000123889999988764321111 000
Q ss_pred ---ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC
Q 025121 177 ---EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV 235 (257)
Q Consensus 177 ---~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 235 (257)
..........+.+|+++++|++|.++|++.+..+++.++..+. +++++++++++|.+.
T Consensus 191 ~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~~~~~l~~~g~-~~~~~~~~~~~H~~~ 251 (283)
T 3bjr_A 191 TPNELAADQHVNSDNQPTFIWTTADDPIVPATNTLAYATALATAKI-PYELHVFKHGPHGLA 251 (283)
T ss_dssp CGGGGCGGGSCCTTCCCEEEEEESCCTTSCTHHHHHHHHHHHHTTC-CEEEEEECCCSHHHH
T ss_pred HhHhcCHHHhccCCCCCEEEEEcCCCCCCChHHHHHHHHHHHHCCC-CeEEEEeCCCCcccc
Confidence 0111122345678999999999999999999999999998876 789999999999654
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.91 E-value=6.2e-23 Score=161.83 Aligned_cols=210 Identities=17% Similarity=0.200 Sum_probs=138.1
Q ss_pred eEEeCCCCCCceEEEEEccCCCC-ccchHHHhhcCCCCceEEEccCCCCCCcccCCCC----cccccccCCCCCCCCCCc
Q 025121 24 THVVRPKGKHQATIVWLHGLGDN-GSSWSQLLESLPLPNIKWICPTAPTRPVAILGGF----PCTAWFDVGELSDDGPED 98 (257)
Q Consensus 24 ~~~~~~~~~~~~~vi~~HG~~~~-~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~----~~~~w~~~~~~~~~~~~~ 98 (257)
.++.++...+.|+||++||++++ ...|.... .++..||.|+++|+|++|.+...-. ....|...+ ........
T Consensus 72 ~~~~P~~~~~~p~vv~~HG~~~~~~~~~~~~~-~l~~~g~~v~~~d~rg~g~s~~~~~~~~~~~~~~~~~~-~~~~~~~~ 149 (318)
T 1l7a_A 72 WYAVPDKEGPHPAIVKYHGYNASYDGEIHEMV-NWALHGYATFGMLVRGQQRSEDTSISPHGHALGWMTKG-ILDKDTYY 149 (318)
T ss_dssp EEEEESSCSCEEEEEEECCTTCCSGGGHHHHH-HHHHTTCEEEEECCTTTSSSCCCCCCSSCCSSSSTTTT-TTCTTTCH
T ss_pred EEEeeCCCCCccEEEEEcCCCCCCCCCccccc-chhhCCcEEEEecCCCCCCCCCcccccCCccccceecc-CCCHHHHH
Confidence 33334444677999999999999 88887765 4556799999999998875543210 001111110 00000001
Q ss_pred hhhHHHHHHHHHHHhccCC--CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhc-
Q 025121 99 WEGLDASAAHIANLLSTEP--ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNK- 175 (257)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~- 175 (257)
.....+++..+.+.+.... +..+++|+|||+||.+++.++.+. +++.++++++|++.........
T Consensus 150 ~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~------------~~~~~~v~~~p~~~~~~~~~~~~ 217 (318)
T 1l7a_A 150 YRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALS------------DIPKAAVADYPYLSNFERAIDVA 217 (318)
T ss_dssp HHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHC------------SCCSEEEEESCCSCCHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccC------------CCccEEEecCCcccCHHHHHhcC
Confidence 1222333333334443322 235999999999999999999853 3477888887765422111000
Q ss_pred -----------cc-----------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEe
Q 025121 176 -----------IE-----------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSF 227 (257)
Q Consensus 176 -----------~~-----------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~ 227 (257)
+. .........+++|+++++|+.|.++|.+.+..+++.++. +++++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~----~~~~~~~ 293 (318)
T 1l7a_A 218 LEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLET----KKELKVY 293 (318)
T ss_dssp CSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCS----SEEEEEE
T ss_pred CcCccHHHHHHHhccCCcccHHHHHHhhccccHHHHHhhCCCCEEEEeccCCCCCCcccHHHHHhhcCC----CeeEEEc
Confidence 00 001223456689999999999999999999999998874 4799999
Q ss_pred cCCCCccCHHHHHHHHHHHHHhcC
Q 025121 228 EGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 228 ~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
++++|....+..+.+.+||.+.++
T Consensus 294 ~~~~H~~~~~~~~~~~~fl~~~l~ 317 (318)
T 1l7a_A 294 RYFGHEYIPAFQTEKLAFFKQILK 317 (318)
T ss_dssp TTCCSSCCHHHHHHHHHHHHHHHC
T ss_pred cCCCCCCcchhHHHHHHHHHHHhC
Confidence 999999888889999999998875
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=6.3e-24 Score=165.04 Aligned_cols=207 Identities=15% Similarity=0.113 Sum_probs=134.6
Q ss_pred CCCceEEEEEccCCCCccchHHH---hhcCCCCceEEEccCCCCCCcccCCCCcccccccCCC---CCCCCCCc----hh
Q 025121 31 GKHQATIVWLHGLGDNGSSWSQL---LESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGE---LSDDGPED----WE 100 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~~~---~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~---~~~~~~~~----~~ 100 (257)
.++.|+||++||.+++...|... .+.++..||.|+++|.+.||.+...+. ..|..... ........ ..
T Consensus 42 ~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~ 119 (282)
T 3fcx_A 42 TGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGED--ESWDFGTGAGFYVDATEDPWKTNYR 119 (282)
T ss_dssp TSCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEEECSCSSCCCC----------CCCCCCTTCBCCSTTHHHHCB
T ss_pred CCCCCEEEEEcCCCCCccchhhcchHHHHhhcCCeEEEEeccccCcccccccc--ccccccCCcccccccCcccccchhh
Confidence 35789999999999998888765 455666899999999855554432221 11100000 00000011 12
Q ss_pred hHHHHHHHHHHHhccCC--CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh-----
Q 025121 101 GLDASAAHIANLLSTEP--ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR----- 173 (257)
Q Consensus 101 ~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----- 173 (257)
........+.+++++.. +.++++|+||||||.+|+.++.+. |+.++++++++|.........
T Consensus 120 ~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-----------p~~~~~~v~~s~~~~~~~~~~~~~~~ 188 (282)
T 3fcx_A 120 MYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKN-----------PGKYKSVSAFAPICNPVLCPWGKKAF 188 (282)
T ss_dssp HHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTS-----------TTTSSCEEEESCCCCGGGSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhC-----------cccceEEEEeCCccCcccCchhHHHH
Confidence 23334445555555322 235999999999999999999954 889999999998765332110
Q ss_pred ---------hccccchHHH---hhhcCCCEEEEccCCCCcccchh--hHHHHHHhhhcCceeeEEEEecCCCCccC--HH
Q 025121 174 ---------NKIEGSHEAA---RRAASLPILLTHGLCDDVVPYKY--GEKSANCLSISGFRHLTFKSFEGLGHYTV--PK 237 (257)
Q Consensus 174 ---------~~~~~~~~~~---~~~~~~P~l~~~G~~D~~v~~~~--~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~ 237 (257)
.+........ .....+|+++++|++|.++|... ++.+.+.+++.+. ++++++++|++|.+. ..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~~l~~~g~-~~~~~~~~g~~H~~~~~~~ 267 (282)
T 3fcx_A 189 SGYLGTDQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFIAACTEKKI-PVVFRLQEDYDHSYYFIAT 267 (282)
T ss_dssp HHHHC---CCGGGGCHHHHHTTCC---CCEEEEEETTCHHHHTTSSCHHHHHHHHHHTTC-CEEEEEETTCCSSHHHHHH
T ss_pred HHhcCCchhhhhhcCHHHHHHhcccCCCcEEEEcCCCCcccccchhhHHHHHHHHHHcCC-ceEEEECCCCCcCHHHHHh
Confidence 0000111111 12337899999999999997655 5689999998887 799999999999875 55
Q ss_pred HHHHHHHHHHHhcC
Q 025121 238 EMDEVCNWLTARLG 251 (257)
Q Consensus 238 ~~~~~~~~l~~~l~ 251 (257)
.+++.++|+.+.|.
T Consensus 268 ~~~~~~~~~~~~l~ 281 (282)
T 3fcx_A 268 FITDHIRHHAKYLN 281 (282)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHhhc
Confidence 67888889888775
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-23 Score=162.80 Aligned_cols=179 Identities=16% Similarity=0.176 Sum_probs=123.0
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.++|||+||++++...|..+++.|++ +|+|+++|+||||.+.... .....++.+.++++.+++
T Consensus 29 ~~~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~----------------~~~~~~~~~~a~dl~~~l 91 (285)
T 3bwx_A 29 RPPVLCLPGLTRNARDFEDLATRLAG-DWRVLCPEMRGRGDSDYAK----------------DPMTYQPMQYLQDLEALL 91 (285)
T ss_dssp SCCEEEECCTTCCGGGGHHHHHHHBB-TBCEEEECCTTBTTSCCCS----------------SGGGCSHHHHHHHHHHHH
T ss_pred CCcEEEECCCCcchhhHHHHHHHhhc-CCEEEeecCCCCCCCCCCC----------------CccccCHHHHHHHHHHHH
Confidence 67899999999999999999999984 9999999999887543211 011223455566666666
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC--CCCc----------------------
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW--LPGS---------------------- 169 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~---------------------- 169 (257)
+..... +++|+||||||.+++.++.++ |++++++|+++.. +...
T Consensus 92 ~~l~~~-~~~lvGhS~Gg~va~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (285)
T 3bwx_A 92 AQEGIE-RFVAIGTSLGGLLTMLLAAAN-----------PARIAAAVLNDVGPEVSPEGLERIRGYVGQGRNFETWMHAA 159 (285)
T ss_dssp HHHTCC-SEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESCCSSCCHHHHHHHHHHTTCCCEESSHHHHH
T ss_pred HhcCCC-ceEEEEeCHHHHHHHHHHHhC-----------chheeEEEEecCCcccCcchhHHHHHHhcCCcccccHHHHH
Confidence 554333 899999999999999999964 8889988876421 1000
Q ss_pred ----------------hhhhh----ccccc----------h------------------HHHhhhc-CCCEEEEccCCCC
Q 025121 170 ----------------RNLRN----KIEGS----------H------------------EAARRAA-SLPILLTHGLCDD 200 (257)
Q Consensus 170 ----------------~~~~~----~~~~~----------~------------------~~~~~~~-~~P~l~~~G~~D~ 200 (257)
..... .+... . ......+ ++|+++++|++|.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~ 239 (285)
T 3bwx_A 160 RALQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDALATRPLLVLRGETSD 239 (285)
T ss_dssp HHHHHHHTTTSTTCCHHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTCCCSSCCHHHHHHHTTSCEEEEEETTCS
T ss_pred HHHHHhhhhcccccChHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhccccchhhHHHHHccCCCeEEEEeCCCC
Confidence 00000 00000 0 0011123 7999999999999
Q ss_pred cccchhhHHHHHHhhhcCceeeEEEEecCCCCccC---HHHHHHHHHHHH
Q 025121 201 VVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV---PKEMDEVCNWLT 247 (257)
Q Consensus 201 ~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~---~~~~~~~~~~l~ 247 (257)
+++.+..+.+.+. + +.++++++++||..+ ++..+.+.+||.
T Consensus 240 ~~~~~~~~~~~~~-~-----~~~~~~i~~~gH~~~~e~p~~~~~i~~fl~ 283 (285)
T 3bwx_A 240 ILSAQTAAKMASR-P-----GVELVTLPRIGHAPTLDEPESIAAIGRLLE 283 (285)
T ss_dssp SSCHHHHHHHHTS-T-----TEEEEEETTCCSCCCSCSHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHhC-C-----CcEEEEeCCCCccchhhCchHHHHHHHHHH
Confidence 9998887777665 4 679999999999977 334455666654
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-23 Score=170.89 Aligned_cols=195 Identities=14% Similarity=0.114 Sum_probs=136.4
Q ss_pred eCCCCCCceEEEEEccCCCCccchHHHhh-cCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025121 27 VRPKGKHQATIVWLHGLGDNGSSWSQLLE-SLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 27 ~~~~~~~~~~vi~~HG~~~~~~~~~~~~~-~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
+++.+++.|+||++||++++...|..... .+...||.|+++|+||+|.+...+. ....+..++
T Consensus 152 ~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~g~~vi~~D~~G~G~s~~~~~----------------~~~~~~~~d 215 (405)
T 3fnb_A 152 IISEDKAQDTLIVVGGGDTSREDLFYMLGYSGWEHDYNVLMVDLPGQGKNPNQGL----------------HFEVDARAA 215 (405)
T ss_dssp ECCSSSCCCEEEEECCSSCCHHHHHHHTHHHHHHTTCEEEEECCTTSTTGGGGTC----------------CCCSCTHHH
T ss_pred EcCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHhCCcEEEEEcCCCCcCCCCCCC----------------CCCccHHHH
Confidence 34444455999999999999988876553 3335899999999998876532110 001122455
Q ss_pred HHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccc--------
Q 025121 106 AAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIE-------- 177 (257)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-------- 177 (257)
+..+.+++.... .+++|+|||+||.+++.++.+. | +++++|+++|...........+.
T Consensus 216 ~~~~~~~l~~~~--~~v~l~G~S~GG~~a~~~a~~~-----------p-~v~~~v~~~p~~~~~~~~~~~~~~~~~~p~~ 281 (405)
T 3fnb_A 216 ISAILDWYQAPT--EKIAIAGFSGGGYFTAQAVEKD-----------K-RIKAWIASTPIYDVAEVFRISFSTALKAPKT 281 (405)
T ss_dssp HHHHHHHCCCSS--SCEEEEEETTHHHHHHHHHTTC-----------T-TCCEEEEESCCSCHHHHHHHHCC--------
T ss_pred HHHHHHHHHhcC--CCEEEEEEChhHHHHHHHHhcC-----------c-CeEEEEEecCcCCHHHHHHHhhhhhhhCcHH
Confidence 566666666543 4999999999999999999853 5 89999999987654322211000
Q ss_pred -----------------------------cch----H--------HHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhh
Q 025121 178 -----------------------------GSH----E--------AARRAASLPILLTHGLCDDVVPYKYGEKSANCLSI 216 (257)
Q Consensus 178 -----------------------------~~~----~--------~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~ 216 (257)
... . .....+++|+|+++|++|.+++.+.+..+++.++.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l~~ 361 (405)
T 3fnb_A 282 ILKWGSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLFLVGAGEDSELMRQSQVLYDNFKQ 361 (405)
T ss_dssp ----------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGGCCSCEEEEEETTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhhCCCCEEEEecCCCcCCChHHHHHHHHHhcc
Confidence 000 0 01456789999999999999999999999999997
Q ss_pred cCceeeEEEEecCC---CCccCH----HHHHHHHHHHHHhcCc
Q 025121 217 SGFRHLTFKSFEGL---GHYTVP----KEMDEVCNWLTARLGL 252 (257)
Q Consensus 217 ~~~~~~~~~~~~g~---~H~~~~----~~~~~~~~~l~~~l~~ 252 (257)
.+. +++++++++. +|.+.. +..+.+.+||.+.++.
T Consensus 362 ~~~-~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l~~ 403 (405)
T 3fnb_A 362 RGI-DVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIFKK 403 (405)
T ss_dssp TTC-CEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHHHC-
T ss_pred CCC-CceEEEEcCCccchhccccchHHHHHHHHHHHHHHHhCc
Confidence 765 7899999544 454442 3457888999988864
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.1e-23 Score=169.46 Aligned_cols=199 Identities=16% Similarity=0.154 Sum_probs=142.0
Q ss_pred CCCceEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCch
Q 025121 20 EFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDW 99 (257)
Q Consensus 20 ~~~~~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~ 99 (257)
.+...++.++...+.|+||++||++++...|......|+..||.|+++|+||+|.+... ....
T Consensus 138 ~i~~~l~~p~~~~~~P~vl~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~G~s~~~-----------------~~~~ 200 (386)
T 2jbw_A 138 PMPVYVRIPEGPGPHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFEY-----------------KRIA 200 (386)
T ss_dssp EEEEEEECCSSSCCEEEEEEECCSSCCTTTTHHHHHHHHHTTCEEEEECCTTSGGGTTT-----------------CCSC
T ss_pred EEEEEEEcCCCCCCCCEEEEeCCCCccHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCC-----------------CCCC
Confidence 33334444444467899999999999988777667777778999999999987654100 0112
Q ss_pred hhHHHHHHHHHHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh----
Q 025121 100 EGLDASAAHIANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR---- 173 (257)
Q Consensus 100 ~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---- 173 (257)
.++.+++.++.+++... ...++++|+|+|+||.+++.++.+ +++++++|++ +.........
T Consensus 201 ~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~------------~~~~~a~v~~-~~~~~~~~~~~~~~ 267 (386)
T 2jbw_A 201 GDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC------------EPRLAACISW-GGFSDLDYWDLETP 267 (386)
T ss_dssp SCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH------------CTTCCEEEEE-SCCSCSTTGGGSCH
T ss_pred ccHHHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC------------CcceeEEEEe-ccCChHHHHHhccH
Confidence 23344455666666553 223599999999999999999984 6789999999 7655432211
Q ss_pred -------hccc--------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHh-hhcCceeeEEEEecCCC
Q 025121 174 -------NKIE--------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCL-SISGFRHLTFKSFEGLG 231 (257)
Q Consensus 174 -------~~~~--------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l-~~~~~~~~~~~~~~g~~ 231 (257)
.... .........+++|+|+++|++|. ++.+.++++++.+ +. +++++++++++
T Consensus 268 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-v~~~~~~~l~~~l~~~----~~~~~~~~~~g 342 (386)
T 2jbw_A 268 LTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAE----HLNLVVEKDGD 342 (386)
T ss_dssp HHHHHHHHHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGG----GEEEEEETTCC
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHhCChhhhhcccCCCEEEEECCCCC-CCHHHHHHHHHHhcCC----CcEEEEeCCCC
Confidence 0000 00111345668999999999999 9999999999999 63 57999999999
Q ss_pred CccC---HHHHHHHHHHHHHhcCcC
Q 025121 232 HYTV---PKEMDEVCNWLTARLGLE 253 (257)
Q Consensus 232 H~~~---~~~~~~~~~~l~~~l~~~ 253 (257)
|... .+..+.+.+||.+.++..
T Consensus 343 H~~~~~~~~~~~~i~~fl~~~l~~~ 367 (386)
T 2jbw_A 343 HCCHNLGIRPRLEMADWLYDVLVAG 367 (386)
T ss_dssp GGGGGGTTHHHHHHHHHHHHHHTSS
T ss_pred cCCccchHHHHHHHHHHHHHhcCCc
Confidence 9763 456789999999988754
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-23 Score=170.41 Aligned_cols=192 Identities=13% Similarity=0.055 Sum_probs=135.4
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCC----CCce---EEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLP----LPNI---KWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~----~~g~---~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
.++|+|||+||++++...|..++..|+ ..|| .|+++|+||+|.+...... ......++.+
T Consensus 50 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G~G~S~~~~~~-------------~~~~~~~~~~ 116 (398)
T 2y6u_A 50 ATRLNLVFLHGSGMSKVVWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSAVRNRG-------------RLGTNFNWID 116 (398)
T ss_dssp CEEEEEEEECCTTCCGGGGGGGGGGSCCCBTTTTEEEEEEEEECCTTSHHHHHHTTT-------------TBCSCCCHHH
T ss_pred CCCCeEEEEcCCCCcHHHHHHHHHHHHHhhhhcCcceeEEEEEcCCCCCCCCCCCcc-------------ccCCCCCcch
Confidence 345899999999999999999999998 3489 9999999988755421100 0001233455
Q ss_pred HHHHHHHHhccCC-----CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch---------
Q 025121 105 SAAHIANLLSTEP-----ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR--------- 170 (257)
Q Consensus 105 ~~~~~~~~~~~~~-----~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------- 170 (257)
.+.++..+++... ...+++|+||||||.+++.++.+. |++++++|++++......
T Consensus 117 ~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~ 185 (398)
T 2y6u_A 117 GARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQ-----------PNLFHLLILIEPVVITRKAIGAGRPGL 185 (398)
T ss_dssp HHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHC-----------TTSCSEEEEESCCCSCCCCCSCCCTTC
T ss_pred HHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhC-----------chheeEEEEeccccccccccccccccc
Confidence 5556655555422 222599999999999999999954 888999999987554200
Q ss_pred ---------hhh------------------hc------ccc---------------------------------------
Q 025121 171 ---------NLR------------------NK------IEG--------------------------------------- 178 (257)
Q Consensus 171 ---------~~~------------------~~------~~~--------------------------------------- 178 (257)
.+. .. ...
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (398)
T 2y6u_A 186 PPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKMEQAQNLLC 265 (398)
T ss_dssp CTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHHHHHHHHHHHEEC--------CCEEESSCHHHHHHT
T ss_pred cccccccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHHHHHHHHHhcCccccccccCCCceEecCCchhhhhh
Confidence 000 00 000
Q ss_pred ---------chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHH----HHHHHHHH
Q 025121 179 ---------SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPK----EMDEVCNW 245 (257)
Q Consensus 179 ---------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~----~~~~~~~~ 245 (257)
........+++|+|+++|++|.++|++.++.+.+.++ ++++++++|+||.+..+ ..+.+.+|
T Consensus 266 ~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~~-----~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 340 (398)
T 2y6u_A 266 YMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTLQ-----NYHLDVIPGGSHLVNVEAPDLVIERINHH 340 (398)
T ss_dssp TSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHCS-----SEEEEEETTCCTTHHHHSHHHHHHHHHHH
T ss_pred hcccccchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhCC-----CceEEEeCCCCccchhcCHHHHHHHHHHH
Confidence 0012334568999999999999999999998988886 67999999999987743 34667778
Q ss_pred HHHhcCc
Q 025121 246 LTARLGL 252 (257)
Q Consensus 246 l~~~l~~ 252 (257)
|.+.+..
T Consensus 341 l~~~~~~ 347 (398)
T 2y6u_A 341 IHEFVLT 347 (398)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8776654
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=161.12 Aligned_cols=183 Identities=12% Similarity=0.037 Sum_probs=131.2
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
..|+|||+||++++...|..+++.|+ .+|.|+++|+||+|.+... ....++.+.++++..+
T Consensus 20 ~~~~vv~lHG~~~~~~~~~~~~~~L~-~~~~v~~~D~~G~G~S~~~------------------~~~~~~~~~~~~~~~~ 80 (264)
T 3ibt_A 20 HAPTLFLLSGWCQDHRLFKNLAPLLA-RDFHVICPDWRGHDAKQTD------------------SGDFDSQTLAQDLLAF 80 (264)
T ss_dssp SSCEEEEECCTTCCGGGGTTHHHHHT-TTSEEEEECCTTCSTTCCC------------------CSCCCHHHHHHHHHHH
T ss_pred CCCeEEEEcCCCCcHhHHHHHHHHHH-hcCcEEEEccccCCCCCCC------------------ccccCHHHHHHHHHHH
Confidence 56799999999999999999999997 5699999999987654322 1123446666677777
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCc-ccccceEEEeccCCCCchhhhh-----------------
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPY-YVNLRAVVGLSGWLPGSRNLRN----------------- 174 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~----------------- 174 (257)
++..... +++|+||||||.+++.++. .+ |+++++++++++..........
T Consensus 81 l~~l~~~-~~~lvGhS~Gg~ia~~~a~-----------~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (264)
T 3ibt_A 81 IDAKGIR-DFQMVSTSHGCWVNIDVCE-----------QLGAARLPKTIIIDWLLQPHPGFWQQLAEGQHPTEYVAGRQS 148 (264)
T ss_dssp HHHTTCC-SEEEEEETTHHHHHHHHHH-----------HSCTTTSCEEEEESCCSSCCHHHHHHHHHTTCTTTHHHHHHH
T ss_pred HHhcCCC-ceEEEecchhHHHHHHHHH-----------hhChhhhheEEEecCCCCcChhhcchhhcccChhhHHHHHHH
Confidence 7665444 8999999999999999999 45 7899999999865411100000
Q ss_pred --------------------ccccc---------------------hHHHhhhcCCCEEEEcc--CCCCcccchhhHHHH
Q 025121 175 --------------------KIEGS---------------------HEAARRAASLPILLTHG--LCDDVVPYKYGEKSA 211 (257)
Q Consensus 175 --------------------~~~~~---------------------~~~~~~~~~~P~l~~~G--~~D~~v~~~~~~~~~ 211 (257)
.+... .......+++|+++++| +.|..++.+..+.+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~~~~~~~~~~~~~~~~ 228 (264)
T 3ibt_A 149 FFDEWAETTDNADVLNHLRNEMPWFHGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIYSQPLSQDYRQLQLEFA 228 (264)
T ss_dssp HHHHHHTTCCCHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEECCSCCHHHHHHHHHHH
T ss_pred HHHHhcccCCcHHHHHHHHHhhhhccchhHHHHHHHhccchhhccchhhcccccCCCeEEEEecCCccchhhHHHHHHHH
Confidence 00000 00233567999999975 455555566667777
Q ss_pred HHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 212 NCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 212 ~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
+.++ +.++++++++||.+..+..+.+.+.|.+++.
T Consensus 229 ~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 263 (264)
T 3ibt_A 229 AGHS-----WFHPRHIPGRTHFPSLENPVAVAQAIREFLQ 263 (264)
T ss_dssp HHCT-----TEEEEECCCSSSCHHHHCHHHHHHHHHHHTC
T ss_pred HhCC-----CceEEEcCCCCCcchhhCHHHHHHHHHHHHh
Confidence 7665 6799999999999887777777777777664
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-23 Score=167.73 Aligned_cols=184 Identities=14% Similarity=0.085 Sum_probs=126.3
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCC-CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPL-PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~-~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
.++|||+||++++...|...+..|+. .+|+|+++|+||+|.+.... .......++...++++..+
T Consensus 54 g~plvllHG~~~~~~~w~~~~~~l~~~~~~~Via~D~rG~G~S~~~~--------------~~~~~~~~~~~~a~dl~~l 119 (330)
T 3nwo_A 54 ALPLIVLHGGPGMAHNYVANIAALADETGRTVIHYDQVGCGNSTHLP--------------DAPADFWTPQLFVDEFHAV 119 (330)
T ss_dssp CCCEEEECCTTTCCSGGGGGGGGHHHHHTCCEEEECCTTSTTSCCCT--------------TSCGGGCCHHHHHHHHHHH
T ss_pred CCcEEEECCCCCCchhHHHHHHHhccccCcEEEEECCCCCCCCCCCC--------------CCccccccHHHHHHHHHHH
Confidence 34799999999999999888888864 58999999999887553210 0011123445556666666
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch------------------h---
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR------------------N--- 171 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------------------~--- 171 (257)
++..... +++|+||||||.+++.+|.+ +|+++.+++++++...... .
T Consensus 120 l~~lg~~-~~~lvGhSmGG~va~~~A~~-----------~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (330)
T 3nwo_A 120 CTALGIE-RYHVLGQSWGGMLGAEIAVR-----------QPSGLVSLAICNSPASMRLWSEAAGDLRAQLPAETRAALDR 187 (330)
T ss_dssp HHHHTCC-SEEEEEETHHHHHHHHHHHT-----------CCTTEEEEEEESCCSBHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHcCCC-ceEEEecCHHHHHHHHHHHh-----------CCccceEEEEecCCcchHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 6654433 89999999999999999995 4899999998876432100 0
Q ss_pred -------------------hhhcc---cc-------------------------------------chHHHhhhcCCCEE
Q 025121 172 -------------------LRNKI---EG-------------------------------------SHEAARRAASLPIL 192 (257)
Q Consensus 172 -------------------~~~~~---~~-------------------------------------~~~~~~~~~~~P~l 192 (257)
+.... .. ........+++|+|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~L 267 (330)
T 3nwo_A 188 HEAAGTITHPDYLQAAAEFYRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHVVGTLGDWSVIDRLPDVTAPVL 267 (330)
T ss_dssp HHHHTCTTSHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHHHHSCHHHHHHTCSCSSSCCSGGGGCBCGGGGGGCCSCEE
T ss_pred HHhccCCCCHHHHHHHHHHHHHhhccccCCCHHHHHHHHhhccchhhhhcccCchhhhhhccccCCchhhhcccCCCCeE
Confidence 00000 00 00012334689999
Q ss_pred EEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHH----HHHHHHHHHh
Q 025121 193 LTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEM----DEVCNWLTAR 249 (257)
Q Consensus 193 ~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~----~~~~~~l~~~ 249 (257)
+++|++|.++|. ..+.+.+.++ +.++++++++||.++.|.. +.+.+||.+.
T Consensus 268 vi~G~~D~~~p~-~~~~~~~~ip-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~FL~~~ 322 (330)
T 3nwo_A 268 VIAGEHDEATPK-TWQPFVDHIP-----DVRSHVFPGTSHCTHLEKPEEFRAVVAQFLHQH 322 (330)
T ss_dssp EEEETTCSSCHH-HHHHHHHHCS-----SEEEEEETTCCTTHHHHSHHHHHHHHHHHHHHH
T ss_pred EEeeCCCccChH-HHHHHHHhCC-----CCcEEEeCCCCCchhhcCHHHHHHHHHHHHHhc
Confidence 999999998874 5677777776 7799999999999885544 4455666553
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.2e-23 Score=177.88 Aligned_cols=209 Identities=16% Similarity=0.079 Sum_probs=146.7
Q ss_pred CCceEEeCCC-CCCceEEEEEccCCCC--ccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCC
Q 025121 21 FGRTHVVRPK-GKHQATIVWLHGLGDN--GSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPE 97 (257)
Q Consensus 21 ~~~~~~~~~~-~~~~~~vi~~HG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~ 97 (257)
+...++.++. .++.|+||++||.+.. ...|..+++.|+++||.|+++|+|+.+. ++ .+|.... . ...
T Consensus 346 i~~~~~~p~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~~-----~G-~s~~~~~-~---~~~ 415 (582)
T 3o4h_A 346 VPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTG-----YG-EEWRLKI-I---GDP 415 (582)
T ss_dssp EEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHHHTTCEEEEECCTTCSS-----SC-HHHHHTT-T---TCT
T ss_pred EEEEEEcCCCCCCCCcEEEEECCCcccccccccCHHHHHHHhCCCEEEEeccCCCCC-----Cc-hhHHhhh-h---hhc
Confidence 3333333332 3478999999997766 6678888899988899999999987321 11 0111110 0 111
Q ss_pred chhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhh---
Q 025121 98 DWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN--- 174 (257)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--- 174 (257)
....+.+..+.+..+++....+ +++|+|||+||++++.++.+. +++++++++++|..........
T Consensus 416 ~~~~~~d~~~~~~~l~~~~~~d-~i~l~G~S~GG~~a~~~a~~~-----------p~~~~~~v~~~~~~~~~~~~~~~~~ 483 (582)
T 3o4h_A 416 CGGELEDVSAAARWARESGLAS-ELYIMGYSYGGYMTLCALTMK-----------PGLFKAGVAGASVVDWEEMYELSDA 483 (582)
T ss_dssp TTHHHHHHHHHHHHHHHTTCEE-EEEEEEETHHHHHHHHHHHHS-----------TTTSSCEEEESCCCCHHHHHHTCCH
T ss_pred ccccHHHHHHHHHHHHhCCCcc-eEEEEEECHHHHHHHHHHhcC-----------CCceEEEEEcCCccCHHHHhhcccc
Confidence 1233445555555555443334 999999999999999999954 8899999999986553321110
Q ss_pred --------cc--------ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC-H-
Q 025121 175 --------KI--------EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-P- 236 (257)
Q Consensus 175 --------~~--------~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-~- 236 (257)
.+ ...+......+++|+|+++|++|..+|++.++++++.++..+. +++++++|+++|.+. .
T Consensus 484 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~-~~~~~~~~~~gH~~~~~~ 562 (582)
T 3o4h_A 484 AFRNFIEQLTGGSREIMRSRSPINHVDRIKEPLALIHPQNASRTPLKPLLRLMGELLARGK-TFEAHIIPDAGHAINTME 562 (582)
T ss_dssp HHHHHHHHHTTTCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHTTC-CEEEEEETTCCSSCCBHH
T ss_pred hhHHHHHHHcCcCHHHHHhcCHHHHHhcCCCCEEEEecCCCCCcCHHHHHHHHHHHHhCCC-CEEEEEECCCCCCCCChH
Confidence 00 1112233556789999999999999999999999999998876 789999999999986 2
Q ss_pred ---HHHHHHHHHHHHhcCc
Q 025121 237 ---KEMDEVCNWLTARLGL 252 (257)
Q Consensus 237 ---~~~~~~~~~l~~~l~~ 252 (257)
+..+.+.+||.+.++.
T Consensus 563 ~~~~~~~~i~~fl~~~l~~ 581 (582)
T 3o4h_A 563 DAVKILLPAVFFLATQRER 581 (582)
T ss_dssp HHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcCC
Confidence 4568899999988764
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3.7e-23 Score=161.53 Aligned_cols=180 Identities=17% Similarity=0.135 Sum_probs=119.3
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
+++|||+||+.++...|......+...||+|+++|+||+|.+.... ....++.+.++++..++
T Consensus 28 ~~~vvllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-----------------~~~~~~~~~~~dl~~~~ 90 (293)
T 1mtz_A 28 KAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPD-----------------QSKFTIDYGVEEAEALR 90 (293)
T ss_dssp SEEEEEECCTTTCCSGGGGGGGGGGGGTEEEEEECCTTSTTSCCCC-----------------GGGCSHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCCcchhHHHHHHHHHhcCcEEEEecCCCCccCCCCC-----------------CCcccHHHHHHHHHHHH
Confidence 3789999998666555544444555678999999999887543211 01123444455555555
Q ss_pred ccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh------------------h--
Q 025121 114 STE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN------------------L-- 172 (257)
Q Consensus 114 ~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------------------~-- 172 (257)
+.. ... +++|+||||||.+++.+|.+. |++++++|++++....... +
T Consensus 91 ~~l~~~~-~~~lvGhS~Gg~va~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (293)
T 1mtz_A 91 SKLFGNE-KVFLMGSSYGGALALAYAVKY-----------QDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIKK 158 (293)
T ss_dssp HHHHTTC-CEEEEEETHHHHHHHHHHHHH-----------GGGEEEEEEESCCSBHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred HHhcCCC-cEEEEEecHHHHHHHHHHHhC-----------chhhheEEecCCccChHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 443 333 899999999999999999964 8899999998875431100 0
Q ss_pred -------------------hh-cc---cc-c-----------------------------------hHHHhhhcCCCEEE
Q 025121 173 -------------------RN-KI---EG-S-----------------------------------HEAARRAASLPILL 193 (257)
Q Consensus 173 -------------------~~-~~---~~-~-----------------------------------~~~~~~~~~~P~l~ 193 (257)
.. .. .. . .......+++|+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~li 238 (293)
T 1mtz_A 159 YGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTLI 238 (293)
T ss_dssp HHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCSCEEE
T ss_pred hhccCCcChHHHHHHHHHHHHhhcccccCchHHHHHhHhhhccchhhhhccCcceecccccccCCChhhhhccCCCCEEE
Confidence 00 00 00 0 00012345799999
Q ss_pred EccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHH----HHHHHHHH
Q 025121 194 THGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMD----EVCNWLTA 248 (257)
Q Consensus 194 ~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~----~~~~~l~~ 248 (257)
++|++| .++++.++.+.+.++ +.++++++++||..+.+..+ .+.+|+.+
T Consensus 239 i~G~~D-~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 291 (293)
T 1mtz_A 239 TVGEYD-EVTPNVARVIHEKIA-----GSELHVFRDCSHLTMWEDREGYNKLLSDFILK 291 (293)
T ss_dssp EEETTC-SSCHHHHHHHHHHST-----TCEEEEETTCCSCHHHHSHHHHHHHHHHHHHT
T ss_pred EeeCCC-CCCHHHHHHHHHhCC-----CceEEEeCCCCCCccccCHHHHHHHHHHHHHh
Confidence 999999 677777888888776 67999999999998755444 45555543
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.5e-23 Score=162.40 Aligned_cols=186 Identities=18% Similarity=0.193 Sum_probs=129.7
Q ss_pred CCCceEEEEEccCC---CCccchHHHh-hcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025121 31 GKHQATIVWLHGLG---DNGSSWSQLL-ESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 31 ~~~~~~vi~~HG~~---~~~~~~~~~~-~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
++..++|||+||++ ++...|..++ ..|. .+|+|+++|+||+|.+.... ....++.+.+
T Consensus 33 g~g~~~vvllHG~~~~~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~-----------------~~~~~~~~~~ 94 (289)
T 1u2e_A 33 GQGDETVVLLHGSGPGATGWANFSRNIDPLVE-AGYRVILLDCPGWGKSDSVV-----------------NSGSRSDLNA 94 (289)
T ss_dssp CCCSSEEEEECCCSTTCCHHHHTTTTHHHHHH-TTCEEEEECCTTSTTSCCCC-----------------CSSCHHHHHH
T ss_pred CCCCceEEEECCCCcccchhHHHHHhhhHHHh-cCCeEEEEcCCCCCCCCCCC-----------------ccccCHHHHH
Confidence 33334899999998 5555677776 7776 45999999999886543211 0023455566
Q ss_pred HHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCC-------c----h-----
Q 025121 107 AHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPG-------S----R----- 170 (257)
Q Consensus 107 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------~----~----- 170 (257)
+++.++++..... +++|+||||||.+++.++.+. |++++++|++++.... . .
T Consensus 95 ~~l~~~l~~l~~~-~~~lvGhS~GG~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (289)
T 1u2e_A 95 RILKSVVDQLDIA-KIHLLGNSMGGHSSVAFTLKW-----------PERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQL 162 (289)
T ss_dssp HHHHHHHHHTTCC-CEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHH
T ss_pred HHHHHHHHHhCCC-ceEEEEECHhHHHHHHHHHHC-----------HHhhhEEEEECCCccccccccccchhhHHHHHHH
Confidence 6666666655443 899999999999999999964 8899999988764310 0 0
Q ss_pred -------hhhh--------------c-----cc---cc--------------------hHHHhhhcCCCEEEEccCCCCc
Q 025121 171 -------NLRN--------------K-----IE---GS--------------------HEAARRAASLPILLTHGLCDDV 201 (257)
Q Consensus 171 -------~~~~--------------~-----~~---~~--------------------~~~~~~~~~~P~l~~~G~~D~~ 201 (257)
.+.. . .. .. .......+++|+++++|++|.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~ 242 (289)
T 1u2e_A 163 YRQPTIENLKLMMDIFVFDTSDLTDALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRF 242 (289)
T ss_dssp HHSCCHHHHHHHHHTTSSCTTSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEEEEEETTCSS
T ss_pred HhcchHHHHHHHHHHhhcCcccCCHHHHHHHHHHhhcChhHHHHHHHHHHhccccccchhhHHhhcCCCeEEEeeCCCCc
Confidence 0000 0 00 00 0012345689999999999999
Q ss_pred ccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 202 VPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 202 v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
+|.+.++.+.+.++ +.++++++++||....+..+.+.+.+.+++.
T Consensus 243 ~~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 287 (289)
T 1u2e_A 243 VPMDAGLRLLSGIA-----GSELHIFRDCGHWAQWEHADAFNQLVLNFLA 287 (289)
T ss_dssp SCTHHHHHHHHHST-----TCEEEEESSCCSCHHHHTHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHhhCC-----CcEEEEeCCCCCchhhcCHHHHHHHHHHHhc
Confidence 99999998988886 5689999999999887766666666666554
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-24 Score=161.30 Aligned_cols=167 Identities=17% Similarity=0.193 Sum_probs=108.7
Q ss_pred ceEEEEEccCCCCccchH--HHhhcCC--CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 34 QATIVWLHGLGDNGSSWS--QLLESLP--LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~--~~~~~l~--~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
.|+|||+||++++...+. .+.+.+. ..+++|++||+|++| .+..+.+
T Consensus 2 mptIl~lHGf~ss~~s~k~~~l~~~~~~~~~~~~v~~pdl~~~g-----------------------------~~~~~~l 52 (202)
T 4fle_A 2 MSTLLYIHGFNSSPSSAKATTFKSWLQQHHPHIEMQIPQLPPYP-----------------------------AEAAEML 52 (202)
T ss_dssp -CEEEEECCTTCCTTCHHHHHHHHHHHHHCTTSEEECCCCCSSH-----------------------------HHHHHHH
T ss_pred CcEEEEeCCCCCCCCccHHHHHHHHHHHcCCCcEEEEeCCCCCH-----------------------------HHHHHHH
Confidence 379999999998887653 2334443 246999999988643 1224444
Q ss_pred HHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhh---------ccc---
Q 025121 110 ANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN---------KIE--- 177 (257)
Q Consensus 110 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---------~~~--- 177 (257)
..++..... ++++|+|+||||.+|+.++.+. +.....++...+.......... ...
T Consensus 53 ~~~~~~~~~-~~i~l~G~SmGG~~a~~~a~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (202)
T 4fle_A 53 ESIVMDKAG-QSIGIVGSSLGGYFATWLSQRF-----------SIPAVVVNPAVRPFELLSDYLGENQNPYTGQKYVLES 120 (202)
T ss_dssp HHHHHHHTT-SCEEEEEETHHHHHHHHHHHHT-----------TCCEEEESCCSSHHHHGGGGCEEEECTTTCCEEEECH
T ss_pred HHHHHhcCC-CcEEEEEEChhhHHHHHHHHHh-----------cccchheeeccchHHHHHHhhhhhccccccccccchH
Confidence 444444333 3999999999999999999964 5555444433321100000000 000
Q ss_pred ------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC--HHHHHHHHHHHHHh
Q 025121 178 ------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV--PKEMDEVCNWLTAR 249 (257)
Q Consensus 178 ------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~~~ 249 (257)
..........++|+|++||++|++||++.+.+++ + ++++++++|++|.+. .+.++.|.+||+-.
T Consensus 121 ~~~~~~~~~~~~~~~~~~P~LiihG~~D~~Vp~~~s~~l~---~-----~~~l~i~~g~~H~~~~~~~~~~~I~~FL~~a 192 (202)
T 4fle_A 121 RHIYDLKAMQIEKLESPDLLWLLQQTGDEVLDYRQAVAYY---T-----PCRQTVESGGNHAFVGFDHYFSPIVTFLGLA 192 (202)
T ss_dssp HHHHHHHTTCCSSCSCGGGEEEEEETTCSSSCHHHHHHHT---T-----TSEEEEESSCCTTCTTGGGGHHHHHHHHTCC
T ss_pred HHHHHHHhhhhhhhccCceEEEEEeCCCCCCCHHHHHHHh---h-----CCEEEEECCCCcCCCCHHHHHHHHHHHHhhh
Confidence 0001123456789999999999999998887664 3 568999999999875 56688899998643
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=99.91 E-value=9e-24 Score=164.80 Aligned_cols=183 Identities=9% Similarity=0.026 Sum_probs=129.4
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.|+|||+||++++...|..+++.|++ +|.|+++|+||+|.+..... ......++.+.++++.+++
T Consensus 28 ~~~vv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~--------------~~~~~~~~~~~~~~~~~~l 92 (297)
T 2qvb_A 28 GDAIVFQHGNPTSSYLWRNIMPHLEG-LGRLVACDLIGMGASDKLSP--------------SGPDRYSYGEQRDFLFALW 92 (297)
T ss_dssp SSEEEEECCTTCCGGGGTTTGGGGTT-SSEEEEECCTTSTTSCCCSS--------------CSTTSSCHHHHHHHHHHHH
T ss_pred CCeEEEECCCCchHHHHHHHHHHHhh-cCeEEEEcCCCCCCCCCCCC--------------ccccCcCHHHHHHHHHHHH
Confidence 57999999999999999999999974 59999999998865432210 0001134556666666666
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-----------------------
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR----------------------- 170 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----------------------- 170 (257)
+......+++|+||||||.+++.++.+. |++++++|++++......
T Consensus 93 ~~~~~~~~~~lvG~S~Gg~~a~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (297)
T 2qvb_A 93 DALDLGDHVVLVLHDWGSALGFDWANQH-----------RDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGFRSPQGEPM 161 (297)
T ss_dssp HHTTCCSCEEEEEEEHHHHHHHHHHHHS-----------GGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHTSTTHHHH
T ss_pred HHcCCCCceEEEEeCchHHHHHHHHHhC-----------hHhhheeeEeccccCCccCCCCChHHHHHHHHHhcccchhh
Confidence 6654414999999999999999999954 889999999987553100
Q ss_pred ------hhhh--------cc------------c---c--------------------------chHHHhhhcCCCEEEEc
Q 025121 171 ------NLRN--------KI------------E---G--------------------------SHEAARRAASLPILLTH 195 (257)
Q Consensus 171 ------~~~~--------~~------------~---~--------------------------~~~~~~~~~~~P~l~~~ 195 (257)
.+.. .. . . ........+++|+++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 241 (297)
T 2qvb_A 162 ALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDMPKLFIN 241 (297)
T ss_dssp HHTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred hccccHHHHHHHhccccccCCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchhhHHHHHHHHhhcccccccEEEEe
Confidence 0000 00 0 0 00112345789999999
Q ss_pred cCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHH----HHHHHHHHHh
Q 025121 196 GLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEM----DEVCNWLTAR 249 (257)
Q Consensus 196 G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~----~~~~~~l~~~ 249 (257)
|++|.++|.+..+.+.+.++ + +++++ ++||.+..+.. +.+.+||.+.
T Consensus 242 G~~D~~~~~~~~~~~~~~~~-----~-~~~~~-~~gH~~~~~~p~~~~~~i~~fl~~~ 292 (297)
T 2qvb_A 242 AEPGAIITGRIRDYVRSWPN-----Q-TEITV-PGVHFVQEDSPEEIGAAIAQFVRRL 292 (297)
T ss_dssp EEECSSSCHHHHHHHHTSSS-----E-EEEEE-EESSCGGGTCHHHHHHHHHHHHHHH
T ss_pred cCCCCcCCHHHHHHHHHHcC-----C-eEEEe-cCccchhhhCHHHHHHHHHHHHHHH
Confidence 99999999988888877765 6 88888 89999875443 5556666554
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=99.91 E-value=7.7e-24 Score=175.35 Aligned_cols=185 Identities=19% Similarity=0.168 Sum_probs=129.8
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
..|+|||+||++++...|..+++.|+..||.|+++|+||+|.+.... ...++.+.++++.++
T Consensus 23 ~gp~VV~lHG~~~~~~~~~~l~~~La~~Gy~Vi~~D~rG~G~S~~~~------------------~~~s~~~~a~dl~~~ 84 (456)
T 3vdx_A 23 TGVPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPT------------------TGYDYDTFAADLNTV 84 (456)
T ss_dssp SSEEEEEECCTTCCGGGGTTHHHHHHHHTEEEEEECCTTSTTSCCCS------------------SCCSHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHHCCcEEEEECCCCCCCCCCCC------------------CCCCHHHHHHHHHHH
Confidence 45899999999999999999999997789999999999876543211 122344445555555
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh-------------------
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR------------------- 173 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------------------- 173 (257)
++..... +++|+||||||.+++.++.+. .|+++++++++++..+......
T Consensus 85 l~~l~~~-~v~LvGhS~GG~ia~~~aa~~----------~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (456)
T 3vdx_A 85 LETLDLQ-DAVLVGFSMGTGEVARYVSSY----------GTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAV 153 (456)
T ss_dssp HHHHTCC-SEEEEEEGGGGHHHHHHHHHH----------CSSSEEEEEEESCCCSCCBCCSSCCSCSBCHHHHHHHHHHH
T ss_pred HHHhCCC-CeEEEEECHHHHHHHHHHHhc----------chhheeEEEEeCCcccccccccccccccchHHHHHHHHHhh
Confidence 5443333 899999999999999988853 2778999999987653210000
Q ss_pred -------------hcccc-------------------------------------chHHHhhhcCCCEEEEccCCCCccc
Q 025121 174 -------------NKIEG-------------------------------------SHEAARRAASLPILLTHGLCDDVVP 203 (257)
Q Consensus 174 -------------~~~~~-------------------------------------~~~~~~~~~~~P~l~~~G~~D~~v~ 203 (257)
..... ........+++|+++++|++|.++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~PvLiI~G~~D~~vp 233 (456)
T 3vdx_A 154 KADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLP 233 (456)
T ss_dssp HHCHHHHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHTSCTTHHHHGGGGTTCCCTTTSTTCCSCCEEEEETTCSSSC
T ss_pred hccchHHHHHHHHHHhcccccccccccHHHHHHHhhhccccchhhhhhhhhhhhhhHHHHhhhCCCCEEEEEeCCCCCcC
Confidence 00000 0001124568999999999999999
Q ss_pred ch-hhHHHHHHhhhcCceeeEEEEecCCCCccCHH----HHHHHHHHHHHhcC
Q 025121 204 YK-YGEKSANCLSISGFRHLTFKSFEGLGHYTVPK----EMDEVCNWLTARLG 251 (257)
Q Consensus 204 ~~-~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~----~~~~~~~~l~~~l~ 251 (257)
.+ ..+.+.+.++ ++++++++++||.+..+ ..+.+.+||.+.+.
T Consensus 234 ~~~~~~~l~~~~~-----~~~~~~i~gagH~~~~e~p~~v~~~I~~FL~~~l~ 281 (456)
T 3vdx_A 234 IENTARVFHKALP-----SAEYVEVEGAPHGLLWTHAEEVNTALLAFLAKALE 281 (456)
T ss_dssp GGGTHHHHHHHCT-----TSEEEEETTCCSCTTTTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCC-----CceEEEeCCCCCcchhhCHHHHHHHHHHHHHHhhc
Confidence 98 5566666654 67999999999997733 44667777776543
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.9e-23 Score=167.04 Aligned_cols=197 Identities=16% Similarity=0.148 Sum_probs=131.9
Q ss_pred CceEEEEEccCCCCcc-------------chHHHhh---cCCCCceEEEccCCCC--CCcccCCCCcc---cccccCCCC
Q 025121 33 HQATIVWLHGLGDNGS-------------SWSQLLE---SLPLPNIKWICPTAPT--RPVAILGGFPC---TAWFDVGEL 91 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~-------------~~~~~~~---~l~~~g~~v~~~d~~~--~g~~~~~g~~~---~~w~~~~~~ 91 (257)
..|+|||+||++++.. .|..++. .|...||+|+++|+|| +|.+....... ..| .
T Consensus 45 ~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s~~~~~~~~~~~~~-~---- 119 (366)
T 2pl5_A 45 KNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPLSIHPETSTPY-G---- 119 (366)
T ss_dssp SCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTTSBCTTTSSBC-G----
T ss_pred CCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCCCCCCCCCCCCccc-c----
Confidence 3679999999999988 6888774 4545799999999998 55432110000 000 0
Q ss_pred CCCCCCchhhHHHHHHHHHHHhccCCCCceE-EEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch
Q 025121 92 SDDGPEDWEGLDASAAHIANLLSTEPADVKV-GIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR 170 (257)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 170 (257)
......++.+.++++..+++..... ++ +|+||||||.+++.++.+. |++++++|++++......
T Consensus 120 ---~~~~~~~~~~~~~dl~~~l~~l~~~-~~~~lvGhS~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~ 184 (366)
T 2pl5_A 120 ---SRFPFVSIQDMVKAQKLLVESLGIE-KLFCVAGGSMGGMQALEWSIAY-----------PNSLSNCIVMASTAEHSA 184 (366)
T ss_dssp ---GGSCCCCHHHHHHHHHHHHHHTTCS-SEEEEEEETHHHHHHHHHHHHS-----------TTSEEEEEEESCCSBCCH
T ss_pred ---CCCCcccHHHHHHHHHHHHHHcCCc-eEEEEEEeCccHHHHHHHHHhC-----------cHhhhheeEeccCccCCC
Confidence 0000234566666777777665444 88 7999999999999999964 889999999987543210
Q ss_pred h------------------------------------------------hhhcc----c---------------------
Q 025121 171 N------------------------------------------------LRNKI----E--------------------- 177 (257)
Q Consensus 171 ~------------------------------------------------~~~~~----~--------------------- 177 (257)
. +...+ .
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (366)
T 2pl5_A 185 MQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGES 264 (366)
T ss_dssp HHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCC
T ss_pred ccchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHHHHHHHHh
Confidence 0 00000 0
Q ss_pred ---c-c---------------------hHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEe-cCCC
Q 025121 178 ---G-S---------------------HEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSF-EGLG 231 (257)
Q Consensus 178 ---~-~---------------------~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~-~g~~ 231 (257)
. . .......+++|+|+++|++|.++|++.++.+.+.++..+. +++++++ +++|
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g 343 (366)
T 2pl5_A 265 FVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADK-RVFYVELQSGEG 343 (366)
T ss_dssp SSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTC-CEEEEEECCCBS
T ss_pred hhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHHHHHHHHHhhhccc-CeEEEEeCCCCC
Confidence 0 0 0013455689999999999999999999999999986543 5789999 8999
Q ss_pred CccCHHHHHHHHHHHHHhc
Q 025121 232 HYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 232 H~~~~~~~~~~~~~l~~~l 250 (257)
|.+..+..+.+.+.+.+++
T Consensus 344 H~~~~e~p~~~~~~i~~fl 362 (366)
T 2pl5_A 344 HDSFLLKNPKQIEILKGFL 362 (366)
T ss_dssp SGGGGSCCHHHHHHHHHHH
T ss_pred cchhhcChhHHHHHHHHHH
Confidence 9987544444444444433
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=99.91 E-value=7.5e-23 Score=160.15 Aligned_cols=185 Identities=19% Similarity=0.200 Sum_probs=132.8
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.|+|||+||++++...|..++..|++ .|+|+++|+||+|.+...+. ......++.+.++++.+++
T Consensus 29 g~~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~--------------~~~~~~~~~~~a~dl~~ll 93 (294)
T 1ehy_A 29 GPTLLLLHGWPGFWWEWSKVIGPLAE-HYDVIVPDLRGFGDSEKPDL--------------NDLSKYSLDKAADDQAALL 93 (294)
T ss_dssp SSEEEEECCSSCCGGGGHHHHHHHHT-TSEEEEECCTTSTTSCCCCT--------------TCGGGGCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCcchhhHHHHHHHHhh-cCEEEecCCCCCCCCCCCcc--------------ccccCcCHHHHHHHHHHHH
Confidence 46899999999999999999999974 59999999998865432100 0001245677777888888
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch--h------------------hh
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR--N------------------LR 173 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~------------------~~ 173 (257)
+..... +++|+||||||.+++.+|.++ |++++++|++++..+... . +.
T Consensus 94 ~~l~~~-~~~lvGhS~Gg~va~~~A~~~-----------P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (294)
T 1ehy_A 94 DALGIE-KAYVVGHDFAAIVLHKFIRKY-----------SDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLDMA 161 (294)
T ss_dssp HHTTCC-CEEEEEETHHHHHHHHHHHHT-----------GGGEEEEEEECCSCTTC-----------CCHHHHHTTCHHH
T ss_pred HHcCCC-CEEEEEeChhHHHHHHHHHhC-----------hhheeEEEEecCCCCCcchhhccchhccCceEEEecCcchh
Confidence 776544 899999999999999999964 889999998885322100 0 00
Q ss_pred -----------h----c-----c---ccc-hH--------------H---------------------HhhhcCCCEEEE
Q 025121 174 -----------N----K-----I---EGS-HE--------------A---------------------ARRAASLPILLT 194 (257)
Q Consensus 174 -----------~----~-----~---~~~-~~--------------~---------------------~~~~~~~P~l~~ 194 (257)
. . . ... .. . ....+++|+|++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi 241 (294)
T 1ehy_A 162 VEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLPVTMI 241 (294)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCSCEEEE
T ss_pred HHHhccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHhcCCcccchHHHHHHHHHhhhhhhcCCcccCcCCCCEEEE
Confidence 0 0 0 000 00 0 001578999999
Q ss_pred ccCCCCcccc-hhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 195 HGLCDDVVPY-KYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 195 ~G~~D~~v~~-~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
+|++|.++|. +..+.+.+.++ +.++++++++||..+.|..+.+.+.|.+++
T Consensus 242 ~G~~D~~~~~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 293 (294)
T 1ehy_A 242 WGLGDTCVPYAPLIEFVPKYYS-----NYTMETIEDCGHFLMVEKPEIAIDRIKTAF 293 (294)
T ss_dssp EECCSSCCTTHHHHHHHHHHBS-----SEEEEEETTCCSCHHHHCHHHHHHHHHHHC
T ss_pred EeCCCCCcchHHHHHHHHHHcC-----CCceEEeCCCCCChhhhCHHHHHHHHHHHh
Confidence 9999999884 55666666665 679999999999998887777777777665
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-23 Score=166.21 Aligned_cols=105 Identities=18% Similarity=0.148 Sum_probs=80.5
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.|+|||+||++++...|..++..|+..||+|+++|+||+|.+..... ......++.+.++++.+++
T Consensus 31 g~~vvllHG~~~~~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~~--------------~~~~~~~~~~~a~dl~~~l 96 (328)
T 2cjp_A 31 GPTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPL--------------NDPSKFSILHLVGDVVALL 96 (328)
T ss_dssp SSEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTCBCCCT--------------TCGGGGSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHHCCcEEEEECCCCCCCCCCcCc--------------CCcccccHHHHHHHHHHHH
Confidence 47999999999999999999999977899999999998875432200 0011234555666666666
Q ss_pred ccCC--CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEecc
Q 025121 114 STEP--ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG 164 (257)
Q Consensus 114 ~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 164 (257)
+... . ++++|+||||||.+++.++.+. |++++++|++++
T Consensus 97 ~~l~~~~-~~~~lvGhS~Gg~ia~~~A~~~-----------p~~v~~lvl~~~ 137 (328)
T 2cjp_A 97 EAIAPNE-EKVFVVAHDWGALIAWHLCLFR-----------PDKVKALVNLSV 137 (328)
T ss_dssp HHHCTTC-SSEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESC
T ss_pred HHhcCCC-CCeEEEEECHHHHHHHHHHHhC-----------hhheeEEEEEcc
Confidence 5543 3 3899999999999999999964 888999988864
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=9.7e-23 Score=168.32 Aligned_cols=198 Identities=17% Similarity=0.146 Sum_probs=132.0
Q ss_pred eEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHH
Q 025121 24 THVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLD 103 (257)
Q Consensus 24 ~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 103 (257)
.++.++...+.|+||++||.++....+ .++.|+..||.|+++|+++++.... ......+.
T Consensus 164 ~l~~P~~~~~~P~Vv~lhG~~~~~~~~--~a~~La~~Gy~Vla~D~rG~~~~~~------------------~~~~~~~~ 223 (446)
T 3hlk_A 164 TLFLPPEPGPFPGIVDMFGTGGGLLEY--RASLLAGKGFAVMALAYYNYEDLPK------------------TMETLHLE 223 (446)
T ss_dssp EEEECSSSCCBCEEEEECCSSCSCCCH--HHHHHHTTTCEEEEECCSSSTTSCS------------------CCSEEEHH
T ss_pred EEEeCCCCCCCCEEEEECCCCcchhhH--HHHHHHhCCCEEEEeccCCCCCCCc------------------chhhCCHH
Confidence 444455556778999999998764444 4778888899999999886432110 00011233
Q ss_pred HHHHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh-----------
Q 025121 104 ASAAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN----------- 171 (257)
Q Consensus 104 ~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----------- 171 (257)
+..+.+..+.+... ...+++|+||||||.+++.++.+. ++ ++++|++++.......
T Consensus 224 d~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~-----------p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~ 291 (446)
T 3hlk_A 224 YFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFL-----------KG-ITAAVVINGSVANVGGTLRYKGETLPP 291 (446)
T ss_dssp HHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHC-----------SC-EEEEEEESCCSBCCSSEEEETTEEECC
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhC-----------CC-ceEEEEEcCcccccCCCccccCccCCc
Confidence 33333333333322 235999999999999999999863 44 8888888775321100
Q ss_pred -----------------hhhcccc-------chHHHhhhcCCCEEEEccCCCCcccchh-hHHHHHHhhhcCceeeEEEE
Q 025121 172 -----------------LRNKIEG-------SHEAARRAASLPILLTHGLCDDVVPYKY-GEKSANCLSISGFRHLTFKS 226 (257)
Q Consensus 172 -----------------~~~~~~~-------~~~~~~~~~~~P~l~~~G~~D~~v~~~~-~~~~~~~l~~~~~~~~~~~~ 226 (257)
+...+.. ........+++|+|+++|++|.++|.+. ++.+.+.+++.+.+++++++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~ 371 (446)
T 3hlk_A 292 VGVNRNRIKVTKDGYADIVDVLNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIIC 371 (446)
T ss_dssp CCBCGGGCEECSSSCEECTTCBCCTTSGGGGGGBCCGGGCCSEEEEEEETTCCSSCHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred cccchhccccccchHHHHHHHHhchhhccccccccCHHHCCCCEEEEEeCCCCCcChHHHHHHHHHHHHHcCCCCcEEEE
Confidence 0000000 0001245678999999999999999855 47899999988873489999
Q ss_pred ecCCCCcc--------------------------------CHHHHHHHHHHHHHhcCcC
Q 025121 227 FEGLGHYT--------------------------------VPKEMDEVCNWLTARLGLE 253 (257)
Q Consensus 227 ~~g~~H~~--------------------------------~~~~~~~~~~~l~~~l~~~ 253 (257)
++++||.+ ..+.++.+.+||++.|...
T Consensus 372 ~pgagH~~~~p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L~~~ 430 (446)
T 3hlk_A 372 YPETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGH 430 (446)
T ss_dssp ETTBCSCCCSTTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred ECCCCCeECCCCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 99999998 2346899999999998754
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-22 Score=155.90 Aligned_cols=185 Identities=18% Similarity=0.149 Sum_probs=126.2
Q ss_pred EEeCCCCCCceEEEEEccCC---CCccchH-HHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchh
Q 025121 25 HVVRPKGKHQATIVWLHGLG---DNGSSWS-QLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWE 100 (257)
Q Consensus 25 ~~~~~~~~~~~~vi~~HG~~---~~~~~~~-~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~ 100 (257)
++.+..+.+.|+|||+||++ ++...|. .+.+.|++. |.|+++|+|+++.. ....
T Consensus 20 ~~~p~~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~~-~~v~~~d~~~~~~~---------------------~~~~ 77 (275)
T 3h04_A 20 IIKAKNQPTKGVIVYIHGGGLMFGKANDLSPQYIDILTEH-YDLIQLSYRLLPEV---------------------SLDC 77 (275)
T ss_dssp EECCSSSSCSEEEEEECCSTTTSCCTTCSCHHHHHHHTTT-EEEEEECCCCTTTS---------------------CHHH
T ss_pred EEccCCCCCCCEEEEEECCcccCCchhhhHHHHHHHHHhC-ceEEeeccccCCcc---------------------ccch
Confidence 33333445789999999988 6665554 788888766 99999998854311 0122
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc----
Q 025121 101 GLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI---- 176 (257)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---- 176 (257)
.+.+....+..+.+. ....+++|+||||||.+++.++. ..+++++++++|+...........
T Consensus 78 ~~~d~~~~~~~l~~~-~~~~~i~l~G~S~Gg~~a~~~a~-------------~~~v~~~v~~~~~~~~~~~~~~~~~~~~ 143 (275)
T 3h04_A 78 IIEDVYASFDAIQSQ-YSNCPIFTFGRSSGAYLSLLIAR-------------DRDIDGVIDFYGYSRINTEPFKTTNSYY 143 (275)
T ss_dssp HHHHHHHHHHHHHHT-TTTSCEEEEEETHHHHHHHHHHH-------------HSCCSEEEEESCCSCSCSHHHHSCCHHH
T ss_pred hHHHHHHHHHHHHhh-CCCCCEEEEEecHHHHHHHHHhc-------------cCCccEEEeccccccccccccccccchh
Confidence 233333333333333 33459999999999999999998 267999999988764321100000
Q ss_pred ----------------------------------------------cc---------chHHHhhhcCCCEEEEccCCCCc
Q 025121 177 ----------------------------------------------EG---------SHEAARRAASLPILLTHGLCDDV 201 (257)
Q Consensus 177 ----------------------------------------------~~---------~~~~~~~~~~~P~l~~~G~~D~~ 201 (257)
.. .......... |+++++|++|.+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~lii~G~~D~~ 222 (275)
T 3h04_A 144 AKIAQSINETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLP-PVFIAHCNGDYD 222 (275)
T ss_dssp HHHHTTSCHHHHHTTSCSSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTTCC-CEEEEEETTCSS
T ss_pred hcccccchHHHHhcccCCCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccccchhccCC-CEEEEecCCCCC
Confidence 00 0000113344 999999999999
Q ss_pred ccchhhHHHHHHhhhcCceeeEEEEecCCCCccC-------HHHHHHHHHHHHHhcC
Q 025121 202 VPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-------PKEMDEVCNWLTARLG 251 (257)
Q Consensus 202 v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-------~~~~~~~~~~l~~~l~ 251 (257)
+|.+.++.+.+.++ +.+++++++++|.+. .+..+.+.+||.+.+.
T Consensus 223 ~~~~~~~~~~~~~~-----~~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 274 (275)
T 3h04_A 223 VPVEESEHIMNHVP-----HSTFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITM 274 (275)
T ss_dssp SCTHHHHHHHTTCS-----SEEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred CChHHHHHHHHhcC-----CceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHHhc
Confidence 99999999988876 568999999999875 2557889999988764
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-23 Score=162.53 Aligned_cols=215 Identities=15% Similarity=0.132 Sum_probs=138.9
Q ss_pred eEEeCCC--CCCceEEEEEccCCCCccchHH---HhhcCCCCceEEEccCCCCCCcccCCCCc-----ccccccCCCCCC
Q 025121 24 THVVRPK--GKHQATIVWLHGLGDNGSSWSQ---LLESLPLPNIKWICPTAPTRPVAILGGFP-----CTAWFDVGELSD 93 (257)
Q Consensus 24 ~~~~~~~--~~~~~~vi~~HG~~~~~~~~~~---~~~~l~~~g~~v~~~d~~~~g~~~~~g~~-----~~~w~~~~~~~~ 93 (257)
.++.++. .++.|+||++||.+++...|.. +.+.++..|+.|+++|.+.||.+...... ..+||..... .
T Consensus 39 ~v~~P~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~~~~~~G~g~~~~~~~~~-~ 117 (283)
T 4b6g_A 39 AVYLPNNPENRPLGVIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLGQSAGFYLNATE-Q 117 (283)
T ss_dssp EEEECCCTTCCCEEEEEEECCTTCCSHHHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCCSSTTSBTTBCTTSBCCS-T
T ss_pred EEEeCCCCCCCCCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEEeccccccccccccccccccCCCcccccCcc-C
Confidence 3344443 5678999999999999887754 33444457999999998877655433210 0111111000 0
Q ss_pred CCCCchhhHHHHHHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhh
Q 025121 94 DGPEDWEGLDASAAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL 172 (257)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 172 (257)
............++.+..+++... ..++++|+||||||.+|+.++.+. |+.++++++++|.+......
T Consensus 118 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~-----------p~~~~~~~~~s~~~~~~~~~ 186 (283)
T 4b6g_A 118 PWAANYQMYDYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRN-----------QERYQSVSAFSPILSPSLVP 186 (283)
T ss_dssp TGGGTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHHH-----------GGGCSCEEEESCCCCGGGSH
T ss_pred cccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEEChhHHHHHHHHHhC-----------CccceeEEEECCccccccCc
Confidence 000000112223344445454432 235999999999999999999964 88999999999976533210
Q ss_pred h--------------hccccchHHHhhh--cCCCEEEEccCCCCcccch-hhHHHHHHhhhcCceeeEEEEecCCCCccC
Q 025121 173 R--------------NKIEGSHEAARRA--ASLPILLTHGLCDDVVPYK-YGEKSANCLSISGFRHLTFKSFEGLGHYTV 235 (257)
Q Consensus 173 ~--------------~~~~~~~~~~~~~--~~~P~l~~~G~~D~~v~~~-~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 235 (257)
. .+....+...... ..+|+++++|+.|.+++.. .++.+.+.+++.++ +++++++||++|.+.
T Consensus 187 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~~~~~~~~~~~~~~l~~~g~-~~~~~~~~g~~H~~~ 265 (283)
T 4b6g_A 187 WGEKAFTAYLGKDREKWQQYDANSLIQQGYKVQGMRIDQGLEDEFLPTQLRTEDFIETCRAANQ-PVDVRFHKGYDHSYY 265 (283)
T ss_dssp HHHHHHHHHHCSCGGGGGGGCHHHHHHHTCCCSCCEEEEETTCTTHHHHTCHHHHHHHHHHHTC-CCEEEEETTCCSSHH
T ss_pred chhhhHHhhcCCchHHHHhcCHHHHHHhcccCCCEEEEecCCCccCcchhhHHHHHHHHHHcCC-CceEEEeCCCCcCHh
Confidence 0 0001111111122 3459999999999999863 37889999998887 799999999999875
Q ss_pred --HHHHHHHHHHHHHhcC
Q 025121 236 --PKEMDEVCNWLTARLG 251 (257)
Q Consensus 236 --~~~~~~~~~~l~~~l~ 251 (257)
.+.++.+++|+.+.|+
T Consensus 266 ~~~~~l~~~l~~~~~~l~ 283 (283)
T 4b6g_A 266 FIASFIGEHIAYHAAFLK 283 (283)
T ss_dssp HHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 5677889999988763
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-22 Score=159.18 Aligned_cols=183 Identities=15% Similarity=0.101 Sum_probs=124.4
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
..++|||+||++++... ..+...+...+|+|+++|+||||.+..... ....++.+.++++..+
T Consensus 33 ~g~pvvllHG~~~~~~~-~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~----------------~~~~~~~~~~~dl~~l 95 (313)
T 1azw_A 33 HGKPVVMLHGGPGGGCN-DKMRRFHDPAKYRIVLFDQRGSGRSTPHAD----------------LVDNTTWDLVADIERL 95 (313)
T ss_dssp TSEEEEEECSTTTTCCC-GGGGGGSCTTTEEEEEECCTTSTTSBSTTC----------------CTTCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCcccc-HHHHHhcCcCcceEEEECCCCCcCCCCCcc----------------cccccHHHHHHHHHHH
Confidence 34679999998765532 234455655799999999999876532110 0112345555666666
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch----------------------
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR---------------------- 170 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------------------- 170 (257)
++..... +++|+||||||.+++.++.++ |++++++|+++++.....
T Consensus 96 ~~~l~~~-~~~lvGhSmGg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (313)
T 1azw_A 96 RTHLGVD-RWQVFGGSWGSTLALAYAQTH-----------PQQVTELVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYL 163 (313)
T ss_dssp HHHTTCS-SEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESCCCCCHHHHHHHHTSSHHHHCHHHHHHHH
T ss_pred HHHhCCC-ceEEEEECHHHHHHHHHHHhC-----------hhheeEEEEeccccCchhhhHHHHhhhhhhhchHHHHHHh
Confidence 6655444 899999999999999999964 889999998875421100
Q ss_pred -------h------hhhc-------------------------cccch--------------------------------
Q 025121 171 -------N------LRNK-------------------------IEGSH-------------------------------- 180 (257)
Q Consensus 171 -------~------~~~~-------------------------~~~~~-------------------------------- 180 (257)
. +... .....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
T 1azw_A 164 NAIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFFEVE 243 (313)
T ss_dssp HTSCGGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHHHHHHHHHHHHHHHTGGGCSST
T ss_pred hccCchhhhhhhhhhhhhccccCcchhhhhhhHHhhhhccccccccccccchhccccchhhHHHHhhhhhhccccccccc
Confidence 0 0000 00000
Q ss_pred ---HHHhhhc-CCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC-HHHHHHHHHHHHHh
Q 025121 181 ---EAARRAA-SLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-PKEMDEVCNWLTAR 249 (257)
Q Consensus 181 ---~~~~~~~-~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~~l~~~ 249 (257)
......+ ++|+|+++|++|.++|++.++.+.+.++ +.++++++++||... ++..+.+++++.++
T Consensus 244 ~~~~~~~~~i~~~P~Lii~G~~D~~~~~~~~~~~~~~~p-----~~~~~~i~~~gH~~~~~~~~~~~~~~i~~f 312 (313)
T 1azw_A 244 DQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAWP-----KAQLQISPASGHSAFEPENVDALVRATDGF 312 (313)
T ss_dssp THHHHTGGGGTTCCEEEEEETTCSSSCHHHHHHHHHHCT-----TSEEEEETTCCSSTTSHHHHHHHHHHHHHH
T ss_pred chhhhhcccccCCCEEEEecCCCCcCCHHHHHHHHhhCC-----CcEEEEeCCCCCCcCCCccHHHHHHHHhhc
Confidence 0011124 4999999999999999999999988887 568999999999875 45577788877664
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-23 Score=166.26 Aligned_cols=199 Identities=16% Similarity=0.144 Sum_probs=134.1
Q ss_pred CCCCCceEEEEEccCCCCccchH-------HHhhcCCCCceEEEccCCCCCCcccCCCCccc------------------
Q 025121 29 PKGKHQATIVWLHGLGDNGSSWS-------QLLESLPLPNIKWICPTAPTRPVAILGGFPCT------------------ 83 (257)
Q Consensus 29 ~~~~~~~~vi~~HG~~~~~~~~~-------~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~------------------ 83 (257)
+.+.++++|||+||++.+...|. .+++.|.++||.|+++|+|++|.+........
T Consensus 57 p~~~~~~~vvl~HG~g~~~~~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (328)
T 1qlw_A 57 PQRAKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAPASSLPDLFAA 136 (328)
T ss_dssp ETTCCSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTTSSCGGGSCCCBCC
T ss_pred cCCCCCccEEEEeCCCCCCCccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccccccccccCcccccceecc
Confidence 33335578999999999999898 48888888899999999999887654321100
Q ss_pred ---ccccCCCCC-------CCCCCchhhHHH------------------HHHHHHHHhccCCCCceEEEEEechhHHHHH
Q 025121 84 ---AWFDVGELS-------DDGPEDWEGLDA------------------SAAHIANLLSTEPADVKVGIGGFSMGAAVAL 135 (257)
Q Consensus 84 ---~w~~~~~~~-------~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~ 135 (257)
.||...... .........+.+ ..+++..+++.. .+++|+||||||.+++
T Consensus 137 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~---~~~~lvGhS~GG~~a~ 213 (328)
T 1qlw_A 137 GHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKL---DGTVLLSHSQSGIYPF 213 (328)
T ss_dssp CHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHH---TSEEEEEEGGGTTHHH
T ss_pred chhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHh---CCceEEEECcccHHHH
Confidence 000000000 000000001222 333444444332 2899999999999999
Q ss_pred HHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhhhcCCCEEEEccCCCCcccc-----hhhHHH
Q 025121 136 YSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPY-----KYGEKS 210 (257)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~-----~~~~~~ 210 (257)
.++.+. |+++++++++++..... ........++|+|+++|++|.++|. +.++.+
T Consensus 214 ~~a~~~-----------p~~v~~~v~~~p~~~~~----------~~~~~~~~~~PvLii~G~~D~~~p~~~~~~~~~~~~ 272 (328)
T 1qlw_A 214 QTAAMN-----------PKGITAIVSVEPGECPK----------PEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAF 272 (328)
T ss_dssp HHHHHC-----------CTTEEEEEEESCSCCCC----------GGGCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHH
T ss_pred HHHHhC-----------hhheeEEEEeCCCCCCC----------HHHHhhccCCCEEEEeccCCccccchhhHHHHHHHH
Confidence 999854 78899999998753110 1111234579999999999999996 889999
Q ss_pred HHHhhhcCceeeEEEEecCCC-----CccCHH-----HHHHHHHHHHHhcCc
Q 025121 211 ANCLSISGFRHLTFKSFEGLG-----HYTVPK-----EMDEVCNWLTARLGL 252 (257)
Q Consensus 211 ~~~l~~~~~~~~~~~~~~g~~-----H~~~~~-----~~~~~~~~l~~~l~~ 252 (257)
.+.+++.+. ++++++++++| |.+..+ ..+.+.+||.+.+..
T Consensus 273 ~~~l~~~g~-~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl~~~~~~ 323 (328)
T 1qlw_A 273 IDALNAAGG-KGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRNTAK 323 (328)
T ss_dssp HHHHHHTTC-CEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHTCC-
T ss_pred HHHHHHhCC-CceEEEcCCCCcCCCcccchhccCHHHHHHHHHHHHHhcccC
Confidence 999998776 78999999555 987633 356777888776543
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.4e-23 Score=159.15 Aligned_cols=170 Identities=14% Similarity=0.183 Sum_probs=128.0
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
+.|+|||+||++++...|..+++.|+..||.|+++|+|+. ....++...++.+.+.
T Consensus 48 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~~s------------------------~~~~~~~~~~~~l~~~ 103 (258)
T 2fx5_A 48 RHPVILWGNGTGAGPSTYAGLLSHWASHGFVVAAAETSNA------------------------GTGREMLACLDYLVRE 103 (258)
T ss_dssp CEEEEEEECCTTCCGGGGHHHHHHHHHHTCEEEEECCSCC------------------------TTSHHHHHHHHHHHHH
T ss_pred CceEEEEECCCCCCchhHHHHHHHHHhCCeEEEEecCCCC------------------------ccHHHHHHHHHHHHhc
Confidence 6789999999999999999999999878999999998731 0122334444555444
Q ss_pred hc-------cCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhh
Q 025121 113 LS-------TEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARR 185 (257)
Q Consensus 113 ~~-------~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (257)
.. .....++++|+||||||.+++.++. +++++++++++++...... ......
T Consensus 104 ~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~-------------~~~v~~~v~~~~~~~~~~~--------~~~~~~ 162 (258)
T 2fx5_A 104 NDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAGQ-------------DTRVRTTAPIQPYTLGLGH--------DSASQR 162 (258)
T ss_dssp HHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHTT-------------STTCCEEEEEEECCSSTTC--------CGGGGG
T ss_pred ccccccccccccCccceEEEEEChHHHHHHHhcc-------------CcCeEEEEEecCccccccc--------chhhhc
Confidence 32 1222248999999999999999985 6789999999886652111 112334
Q ss_pred hcCCCEEEEccCCCCcccchh-hHHHHHHhhhcCceeeEEEEecCCCCccCH----HHHHHHHHHHHHhcC
Q 025121 186 AASLPILLTHGLCDDVVPYKY-GEKSANCLSISGFRHLTFKSFEGLGHYTVP----KEMDEVCNWLTARLG 251 (257)
Q Consensus 186 ~~~~P~l~~~G~~D~~v~~~~-~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~----~~~~~~~~~l~~~l~ 251 (257)
.+++|+|+++|++|.+++.+. .+.+++... . +++++++++++|.... +..+.+.+||.+.+.
T Consensus 163 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~---~-~~~~~~~~g~~H~~~~~~~~~~~~~i~~fl~~~l~ 229 (258)
T 2fx5_A 163 RQQGPMFLMSGGGDTIAFPYLNAQPVYRRAN---V-PVFWGERRYVSHFEPVGSGGAYRGPSTAWFRFQLM 229 (258)
T ss_dssp CCSSCEEEEEETTCSSSCHHHHTHHHHHHCS---S-CEEEEEESSCCTTSSTTTCGGGHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEcCCCcccCchhhHHHHHhccC---C-CeEEEEECCCCCccccchHHHHHHHHHHHHHHHhc
Confidence 578999999999999999886 777777732 1 6899999999999863 567889999987664
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-23 Score=168.69 Aligned_cols=106 Identities=18% Similarity=0.143 Sum_probs=82.0
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
..|+|||+||++++...|..+++.|+..||.|+++|+||+|.+.... .....++.+.++++..+
T Consensus 26 ~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~vi~~d~~g~g~s~~~~----------------~~~~~~~~~~~~~~~~~ 89 (356)
T 2e3j_A 26 QGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSKYR----------------VQKAYRIKELVGDVVGV 89 (356)
T ss_dssp CSCEEEEECCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCCCC----------------SGGGGSHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC----------------cccccCHHHHHHHHHHH
Confidence 56899999999999999999999887779999999999876432211 11123456666666666
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCC
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWL 166 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 166 (257)
++..... +++|+||||||.+++.++.+. ++++++++++++..
T Consensus 90 ~~~l~~~-~~~l~G~S~Gg~~a~~~a~~~-----------p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 90 LDSYGAE-QAFVVGHDWGAPVAWTFAWLH-----------PDRCAGVVGISVPF 131 (356)
T ss_dssp HHHTTCS-CEEEEEETTHHHHHHHHHHHC-----------GGGEEEEEEESSCC
T ss_pred HHHcCCC-CeEEEEECHhHHHHHHHHHhC-----------cHhhcEEEEECCcc
Confidence 6655433 899999999999999999854 88899999887654
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-23 Score=161.40 Aligned_cols=187 Identities=15% Similarity=0.073 Sum_probs=127.3
Q ss_pred EeCCCCCCceEEEEEccCC---CCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhH
Q 025121 26 VVRPKGKHQATIVWLHGLG---DNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGL 102 (257)
Q Consensus 26 ~~~~~~~~~~~vi~~HG~~---~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 102 (257)
++.+.+++.|+|||+||.+ ++...|..+++.|++.||.|+++|+|+++. ......
T Consensus 55 ~~~p~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~~~~~----------------------~~~~~~ 112 (262)
T 2pbl_A 55 LFLPEGTPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPE----------------------VRISEI 112 (262)
T ss_dssp EECCSSSCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTT----------------------SCHHHH
T ss_pred EEccCCCCCCEEEEEcCcccccCChHHHHHHHHHHHhCCCEEEEeCCCCCCC----------------------CChHHH
Confidence 3434446789999999954 777788888888887899999999875421 112233
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccc-----
Q 025121 103 DASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIE----- 177 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----- 177 (257)
.+++..+.+.+..... .+++|+||||||.+++.++.+... ....+.+++++++++++............
T Consensus 113 ~~d~~~~~~~l~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~-----~~~~~~~v~~~vl~~~~~~~~~~~~~~~~~~~~~ 186 (262)
T 2pbl_A 113 TQQISQAVTAAAKEID-GPIVLAGHSAGGHLVARMLDPEVL-----PEAVGARIRNVVPISPLSDLRPLLRTSMNEKFKM 186 (262)
T ss_dssp HHHHHHHHHHHHHHSC-SCEEEEEETHHHHHHHHTTCTTTS-----CHHHHTTEEEEEEESCCCCCGGGGGSTTHHHHCC
T ss_pred HHHHHHHHHHHHHhcc-CCEEEEEECHHHHHHHHHhccccc-----cccccccceEEEEecCccCchHHHhhhhhhhhCC
Confidence 3333333333333222 499999999999999999874200 00016789999999997764432221110
Q ss_pred -------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHH
Q 025121 178 -------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWL 246 (257)
Q Consensus 178 -------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l 246 (257)
..+......+++|+++++|++|.+++.+.++.+.+.++ +++++++|++|....+.......++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~------~~~~~~~~~~H~~~~~~~~~~~~~l 256 (262)
T 2pbl_A 187 DADAAIAESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWD------ADHVIAFEKHHFNVIEPLADPESDL 256 (262)
T ss_dssp CHHHHHHTCGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHT------CEEEEETTCCTTTTTGGGGCTTCHH
T ss_pred CHHHHHhcCcccccCCCCCCEEEEEeCCCCcccHHHHHHHHHHhC------CeEEEeCCCCcchHHhhcCCCCcHH
Confidence 01111234568999999999999999999999999986 4899999999998866544333333
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.2e-23 Score=163.15 Aligned_cols=185 Identities=8% Similarity=-0.007 Sum_probs=129.6
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.|+|||+||++++...|..+++.|+. .|.|+++|+||+|.+..... ......++.+.++++.+++
T Consensus 29 ~~~vv~lHG~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~S~~~~~--------------~~~~~~~~~~~~~~~~~~l 93 (302)
T 1mj5_A 29 GDPILFQHGNPTSSYLWRNIMPHCAG-LGRLIACDLIGMGDSDKLDP--------------SGPERYAYAEHRDYLDALW 93 (302)
T ss_dssp SSEEEEECCTTCCGGGGTTTGGGGTT-SSEEEEECCTTSTTSCCCSS--------------CSTTSSCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchhhhHHHHHHhcc-CCeEEEEcCCCCCCCCCCCC--------------CCcccccHHHHHHHHHHHH
Confidence 57999999999999999999999974 58999999998765432210 0011134566666776777
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-----------------------
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR----------------------- 170 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----------------------- 170 (257)
+......+++|+||||||.+++.++.+. |++++++|++++..+...
T Consensus 94 ~~l~~~~~~~lvG~S~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (302)
T 1mj5_A 94 EALDLGDRVVLVVHDWGSALGFDWARRH-----------RERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQAGEEL 162 (302)
T ss_dssp HHTTCTTCEEEEEEHHHHHHHHHHHHHT-----------GGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHSTTHHHH
T ss_pred HHhCCCceEEEEEECCccHHHHHHHHHC-----------HHHHhheeeecccCCchhhhhhhHHHHHHHHHHhccchhhh
Confidence 6654424999999999999999999964 888999999987653110
Q ss_pred ------hhhh--------cc--------------------------cc---------------chHHHhhhcCCCEEEEc
Q 025121 171 ------NLRN--------KI--------------------------EG---------------SHEAARRAASLPILLTH 195 (257)
Q Consensus 171 ------~~~~--------~~--------------------------~~---------------~~~~~~~~~~~P~l~~~ 195 (257)
.+.. .. .. ........+++|+++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~ 242 (302)
T 1mj5_A 163 VLQDNVFVEQVLPGLILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPIPKLFIN 242 (302)
T ss_dssp HTTTCHHHHTHHHHTSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCCSCEEEEE
T ss_pred hcChHHHHHHHHHhcCcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccchhhHHHHHHHHhhhhccCCCeEEEE
Confidence 0000 00 00 00112234689999999
Q ss_pred cCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHH----HHHHHHHHHHhcC
Q 025121 196 GLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKE----MDEVCNWLTARLG 251 (257)
Q Consensus 196 G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~----~~~~~~~l~~~l~ 251 (257)
|++|.++|.+..+.+.+.++ + +++++ ++||.+..+. .+.+.+|+.+...
T Consensus 243 g~~D~~~~~~~~~~~~~~~~-----~-~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~~~~ 295 (302)
T 1mj5_A 243 AEPGALTTGRMRDFCRTWPN-----Q-TEITV-AGAHFIQEDSPDEIGAAIAAFVRRLRP 295 (302)
T ss_dssp EEECSSSSHHHHHHHTTCSS-----E-EEEEE-EESSCGGGTCHHHHHHHHHHHHHHHSC
T ss_pred eCCCCCCChHHHHHHHHhcC-----C-ceEEe-cCcCcccccCHHHHHHHHHHHHHhhcc
Confidence 99999999988777776665 6 88889 8999987444 4556666665443
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.90 E-value=8.9e-23 Score=157.26 Aligned_cols=104 Identities=17% Similarity=0.283 Sum_probs=79.0
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
..+|+|||+||++++...|..+++.|++.+|+|+++|+||||.+... ...++.+.++++.+
T Consensus 14 ~~~~~vvllHG~~~~~~~w~~~~~~L~~~~~~vi~~Dl~GhG~S~~~-------------------~~~~~~~~a~~l~~ 74 (264)
T 1r3d_A 14 ARTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPER-------------------HCDNFAEAVEMIEQ 74 (264)
T ss_dssp TTBCEEEEECCTTCCGGGGHHHHHHHTTSSCEEEEECCTTCSSCC--------------------------CHHHHHHHH
T ss_pred CCCCcEEEEcCCCCCHHHHHHHHHHhcccCceEEEecCCCCCCCCCC-------------------CccCHHHHHHHHHH
Confidence 33479999999999999999999999767899999999998754311 01234556677777
Q ss_pred HhccCCCCc-eEEEEEechhHHHHHH---HHHhccccCCCCCCCcccccceEEEeccC
Q 025121 112 LLSTEPADV-KVGIGGFSMGAAVALY---SATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 112 ~~~~~~~~~-~i~l~G~S~Gg~~a~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
+++...... +++|+||||||.+++. ++.+ +|++++++|++++.
T Consensus 75 ~l~~l~~~~~p~~lvGhSmGG~va~~~~~~a~~-----------~p~~v~~lvl~~~~ 121 (264)
T 1r3d_A 75 TVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAF-----------SRLNLRGAIIEGGH 121 (264)
T ss_dssp HHHTTCCTTSEEEEEEETHHHHHHHHHHHHTTT-----------TTSEEEEEEEESCC
T ss_pred HHHHhCcCCCceEEEEECHhHHHHHHHHHHHhh-----------CccccceEEEecCC
Confidence 777654442 4999999999999999 6663 48889999988753
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.6e-23 Score=161.59 Aligned_cols=181 Identities=17% Similarity=0.144 Sum_probs=128.3
Q ss_pred eEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhc
Q 025121 35 ATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLS 114 (257)
Q Consensus 35 ~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (257)
++|||+||++++...|..+++.|.. +|.|+++|+||+|.+... ....++.+.++++.++++
T Consensus 52 ~~lvllHG~~~~~~~~~~l~~~L~~-~~~v~~~D~~G~G~S~~~------------------~~~~~~~~~a~~~~~~l~ 112 (280)
T 3qmv_A 52 LRLVCFPYAGGTVSAFRGWQERLGD-EVAVVPVQLPGRGLRLRE------------------RPYDTMEPLAEAVADALE 112 (280)
T ss_dssp EEEEEECCTTCCGGGGTTHHHHHCT-TEEEEECCCTTSGGGTTS------------------CCCCSHHHHHHHHHHHHH
T ss_pred ceEEEECCCCCChHHHHHHHHhcCC-CceEEEEeCCCCCCCCCC------------------CCCCCHHHHHHHHHHHHH
Confidence 7899999999999999999999985 999999999987654211 113345666777777777
Q ss_pred cCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccc----eEEEeccCCCCchh-----------hhhcc---
Q 025121 115 TEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLR----AVVGLSGWLPGSRN-----------LRNKI--- 176 (257)
Q Consensus 115 ~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~-----------~~~~~--- 176 (257)
......+++|+||||||.+++.++.+. ++++. .+++.+...+.... +...+
T Consensus 113 ~~~~~~~~~lvG~S~Gg~va~~~a~~~-----------p~~~~~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 181 (280)
T 3qmv_A 113 EHRLTHDYALFGHSMGALLAYEVACVL-----------RRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDL 181 (280)
T ss_dssp HTTCSSSEEEEEETHHHHHHHHHHHHH-----------HHTTCCCCSCEEEESCCCGGGCSCCCGGGSCHHHHHHHHHHH
T ss_pred HhCCCCCEEEEEeCHhHHHHHHHHHHH-----------HHcCCCCceEEEEECCCCCCCcCcccccccCHHHHHHHHHHh
Confidence 663345999999999999999999965 54444 56655443221100 00000
Q ss_pred --------------ccc-h-------------HHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEec
Q 025121 177 --------------EGS-H-------------EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFE 228 (257)
Q Consensus 177 --------------~~~-~-------------~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~ 228 (257)
... . ......+++|+++++|++|.+++.+..+.+.+.++. ..++++++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~----~~~~~~~~ 257 (280)
T 3qmv_A 182 GGLDDADTLGAAYFDRRLPVLRADLRACERYDWHPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTTG----SFLRRHLP 257 (280)
T ss_dssp TCCC---------CCTTHHHHHHHHHHHHTCCCCCCCCBCSCEEEEEEEECSSSCHHHHHTTGGGBSS----CEEEEEEE
T ss_pred CCCChhhhcCHHHHHHHHHHHHHHHHHHHhccccCCCceecCeEEEEecCCCCcChHHHHHHHHhcCC----ceEEEEec
Confidence 000 0 000135689999999999999998887777666642 46788888
Q ss_pred CCCCccCH--HHHHHHHHHHHHhc
Q 025121 229 GLGHYTVP--KEMDEVCNWLTARL 250 (257)
Q Consensus 229 g~~H~~~~--~~~~~~~~~l~~~l 250 (257)
+ ||..+. +..+.+.+.|.++|
T Consensus 258 g-gH~~~~~~~~~~~~~~~i~~~L 280 (280)
T 3qmv_A 258 G-NHFFLNGGPSRDRLLAHLGTEL 280 (280)
T ss_dssp E-ETTGGGSSHHHHHHHHHHHTTC
T ss_pred C-CCeEEcCchhHHHHHHHHHhhC
Confidence 6 999887 88888888887654
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=99.90 E-value=5e-23 Score=161.13 Aligned_cols=187 Identities=14% Similarity=0.085 Sum_probs=124.0
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
..|+|||+||++++...|..++..|.. ||.|+++|+||+|.+...... ......++.+.++++.++
T Consensus 32 ~~~~vv~lHG~~~~~~~~~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~-------------~~~~~~~~~~~~~~~~~~ 97 (306)
T 3r40_A 32 DGPPLLLLHGFPQTHVMWHRVAPKLAE-RFKVIVADLPGYGWSDMPESD-------------EQHTPYTKRAMAKQLIEA 97 (306)
T ss_dssp CSSEEEEECCTTCCGGGGGGTHHHHHT-TSEEEEECCTTSTTSCCCCCC-------------TTCGGGSHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHhcc-CCeEEEeCCCCCCCCCCCCCC-------------cccCCCCHHHHHHHHHHH
Confidence 457999999999999999999999985 999999999988754332110 001134566677777777
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch----------------------
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR---------------------- 170 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------------------- 170 (257)
++..... +++|+||||||.+++.++.+. |++++++|++++......
T Consensus 98 l~~l~~~-~~~lvGhS~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (306)
T 3r40_A 98 MEQLGHV-HFALAGHNRGARVSYRLALDS-----------PGRLSKLAVLDILPTYEYWQRMNRAYALKIYHWSFLAQPA 165 (306)
T ss_dssp HHHTTCS-SEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESCCCHHHHHHHCSHHHHHHSTHHHHHTSCT
T ss_pred HHHhCCC-CEEEEEecchHHHHHHHHHhC-----------hhhccEEEEecCCCCccchhhhhhhhhhhhHHHHHhhccc
Confidence 7765444 899999999999999999964 889999999986321000
Q ss_pred -------------hh------------hhcc------------ccchH-----------------------HHhhhcCCC
Q 025121 171 -------------NL------------RNKI------------EGSHE-----------------------AARRAASLP 190 (257)
Q Consensus 171 -------------~~------------~~~~------------~~~~~-----------------------~~~~~~~~P 190 (257)
.+ .... ..... .....+++|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 245 (306)
T 3r40_A 166 PLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRHVMCEDYRAGAYADFEHDKIDVEAGNKIPVP 245 (306)
T ss_dssp THHHHHHTSCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHHTSHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCBCSC
T ss_pred chHHHHHcCCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHHccCCCcchhhHHHHhcccccchhhhhhhhhccCCCcc
Confidence 00 0000 00000 012567899
Q ss_pred EEEEccCCCCcccchh-hHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 191 ILLTHGLCDDVVPYKY-GEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 191 ~l~~~G~~D~~v~~~~-~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
+++++|++|.+++... .+.+.+..+ +.++.++ ++||.++.+..+.+.+.|.+++.
T Consensus 246 ~lii~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~-~~gH~~~~e~p~~~~~~i~~fl~ 301 (306)
T 3r40_A 246 MLALWGASGIAQSAATPLDVWRKWAS-----DVQGAPI-ESGHFLPEEAPDQTAEALVRFFS 301 (306)
T ss_dssp EEEEEETTCC------CHHHHHHHBS-----SEEEEEE-SSCSCHHHHSHHHHHHHHHHHHH
T ss_pred eEEEEecCCcccCchhHHHHHHhhcC-----CCeEEEe-cCCcCchhhChHHHHHHHHHHHH
Confidence 9999999999999444 444444443 6677888 57999886665555555555544
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.90 E-value=9.1e-23 Score=162.03 Aligned_cols=198 Identities=19% Similarity=0.175 Sum_probs=133.1
Q ss_pred CCCCCceEEEEEccCC---CCccchHHHhhcCCC-CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025121 29 PKGKHQATIVWLHGLG---DNGSSWSQLLESLPL-PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 29 ~~~~~~~~vi~~HG~~---~~~~~~~~~~~~l~~-~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
|.+.+.|+||++||.+ ++...|..+++.|+. .||.|+++|+|+.+. . ..+....++.+
T Consensus 82 p~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~V~~~dyr~~p~-----~-------------~~~~~~~D~~~ 143 (326)
T 3ga7_A 82 PQPTSQATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQ-----A-------------RYPQAIEETVA 143 (326)
T ss_dssp SSSSCSCEEEEECCSTTTSCCTTTTHHHHHHHHHHHCSEEEEECCCCTTT-----S-------------CTTHHHHHHHH
T ss_pred CCCCCCcEEEEECCCCcccCChhhhHHHHHHHHHHcCCEEEEeeCCCCCC-----C-------------CCCcHHHHHHH
Confidence 3334459999999988 888889999999885 699999999874321 0 11112333344
Q ss_pred HHHHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc-------
Q 025121 105 SAAHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI------- 176 (257)
Q Consensus 105 ~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~------- 176 (257)
.+.++.+..... .+.++|+|+|+|+||.+++.++.+.+... .....++++++++++...........
T Consensus 144 a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~-----~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~ 218 (326)
T 3ga7_A 144 VCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKH-----IRCGNVIAILLWYGLYGLQDSVSRRLFGGAWDG 218 (326)
T ss_dssp HHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHT-----CCSSEEEEEEEESCCCSCSCCHHHHHCCCTTTT
T ss_pred HHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcC-----CCccCceEEEEeccccccCCChhHhhhcCCCCC
Confidence 444444433332 23469999999999999999998642110 00124888999988754332111000
Q ss_pred -c-------------c-----ch-----HHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCC
Q 025121 177 -E-------------G-----SH-----EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGH 232 (257)
Q Consensus 177 -~-------------~-----~~-----~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H 232 (257)
. . .. .........|+++++|+.|.+++ .+..+++++++.|+ ++++++++|++|
T Consensus 219 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~~--~~~~~~~~l~~~g~-~~~~~~~~g~~H 295 (326)
T 3ga7_A 219 LTREDLDMYEKAYLRNDEDRESPWYCLFNNDLTRDVPPCFIASAEFDPLID--DSRLLHQTLQAHQQ-PCEYKMYPGTLH 295 (326)
T ss_dssp CCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCSSCCCCEEEEEETTCTTHH--HHHHHHHHHHHTTC-CEEEEEETTCCT
T ss_pred CCHHHHHHHHHHhCCCCCccCCcccCCCcchhhcCCCCEEEEecCcCcCHH--HHHHHHHHHHHCCC-cEEEEEeCCCcc
Confidence 0 0 00 00111245699999999999984 67889999999887 899999999999
Q ss_pred ccC---------HHHHHHHHHHHHHhcCc
Q 025121 233 YTV---------PKEMDEVCNWLTARLGL 252 (257)
Q Consensus 233 ~~~---------~~~~~~~~~~l~~~l~~ 252 (257)
.+. .+..+.+.+||.+.++.
T Consensus 296 ~f~~~~~~~~~~~~~~~~~~~fl~~~l~~ 324 (326)
T 3ga7_A 296 AFLHYSRMMTIADDALQDGARFFMARMKT 324 (326)
T ss_dssp TGGGGTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred chhhhcCccHHHHHHHHHHHHHHHHHhcc
Confidence 874 44678999999988754
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-22 Score=155.88 Aligned_cols=189 Identities=19% Similarity=0.168 Sum_probs=130.0
Q ss_pred CCceEEEEEccCCCCccchHH---HhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQ---LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~---~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
.+.|+||++||++++...|.. +...+...|+.|+.+|.++++.... ..........+++
T Consensus 39 ~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~------------------~~~~~~~~~~~~~ 100 (263)
T 2uz0_A 39 EDIPVLYLLHGMSGNHNSWLKRTNVERLLRGTNLIVVMPNTSNGWYTDT------------------QYGFDYYTALAEE 100 (263)
T ss_dssp CCBCEEEEECCTTCCTTHHHHHSCHHHHTTTCCCEEEECCCTTSTTSBC------------------TTSCBHHHHHHTH
T ss_pred CCCCEEEEECCCCCCHHHHHhccCHHHHHhcCCeEEEEECCCCCccccC------------------CCcccHHHHHHHH
Confidence 467899999999999998887 3344455799999998764321110 0001112333334
Q ss_pred HHHHhccC-----CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh----------
Q 025121 109 IANLLSTE-----PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR---------- 173 (257)
Q Consensus 109 ~~~~~~~~-----~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---------- 173 (257)
+..+++.. ...++++|+|||+||.+++.++. . ++++++++++++.........
T Consensus 101 ~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~-----------~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 168 (263)
T 2uz0_A 101 LPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-T-----------TNRFSHAASFSGALSFQNFSPESQNLGSPAY 168 (263)
T ss_dssp HHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-H-----------HCCCSEEEEESCCCCSSSCCGGGTTCSCHHH
T ss_pred HHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-C-----------ccccceEEEecCCcchhhccccccccccchh
Confidence 44444331 23358999999999999999988 5 788999999998765433110
Q ss_pred -----------hccccchHHHhhhcC--CCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC--HHH
Q 025121 174 -----------NKIEGSHEAARRAAS--LPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV--PKE 238 (257)
Q Consensus 174 -----------~~~~~~~~~~~~~~~--~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~ 238 (257)
............... +|+++++|++|.+++ .++.+.+.+++.+. ++++++++| +|.+. .+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~--~~~~~~~~l~~~g~-~~~~~~~~g-~H~~~~~~~~ 244 (263)
T 2uz0_A 169 WRGVFGEIRDWTTSPYSLESLAKKSDKKTKLWAWCGEQDFLYE--ANNLAVKNLKKLGF-DVTYSHSAG-THEWYYWEKQ 244 (263)
T ss_dssp HHHHHCCCSCTTTSTTSHHHHGGGCCSCSEEEEEEETTSTTHH--HHHHHHHHHHHTTC-EEEEEEESC-CSSHHHHHHH
T ss_pred HHHHcCChhhhccccCCHHHHHHhccCCCeEEEEeCCCchhhH--HHHHHHHHHHHCCC-CeEEEECCC-CcCHHHHHHH
Confidence 000011111222222 899999999999985 46889999998887 789999999 99876 677
Q ss_pred HHHHHHHHHHhcCcCC
Q 025121 239 MDEVCNWLTARLGLEG 254 (257)
Q Consensus 239 ~~~~~~~l~~~l~~~~ 254 (257)
.+.+++||.+.++.++
T Consensus 245 ~~~~~~~l~~~l~~~~ 260 (263)
T 2uz0_A 245 LEVFLTTLPIDFKLEE 260 (263)
T ss_dssp HHHHHHHSSSCCCCCC
T ss_pred HHHHHHHHHhhccchh
Confidence 8999999998887553
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.7e-22 Score=156.97 Aligned_cols=185 Identities=15% Similarity=0.048 Sum_probs=125.3
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
..++|||+||++++... ..+...+...+|+|+++|+||+|.+..... ....++.+.++++..+
T Consensus 36 ~g~~vvllHG~~~~~~~-~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~----------------~~~~~~~~~~~dl~~l 98 (317)
T 1wm1_A 36 NGKPAVFIHGGPGGGIS-PHHRQLFDPERYKVLLFDQRGCGRSRPHAS----------------LDNNTTWHLVADIERL 98 (317)
T ss_dssp TSEEEEEECCTTTCCCC-GGGGGGSCTTTEEEEEECCTTSTTCBSTTC----------------CTTCSHHHHHHHHHHH
T ss_pred CCCcEEEECCCCCcccc-hhhhhhccccCCeEEEECCCCCCCCCCCcc----------------cccccHHHHHHHHHHH
Confidence 34679999998765532 233455555799999999999876532110 0112344555566666
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch----------------------
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR---------------------- 170 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------------------- 170 (257)
++..... +++|+||||||.+++.++.++ |++++++|++++......
T Consensus 99 ~~~l~~~-~~~lvGhS~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (317)
T 1wm1_A 99 REMAGVE-QWLVFGGSWGSTLALAYAQTH-----------PERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVL 166 (317)
T ss_dssp HHHTTCS-SEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESCCCCCHHHHHHHHTSSGGGTSHHHHHHHH
T ss_pred HHHcCCC-cEEEEEeCHHHHHHHHHHHHC-----------ChheeeeeEeccCCCchhhhhHHhhccchhhcHHHHHHHH
Confidence 6555444 899999999999999999964 889999998765321100
Q ss_pred -------h---hh---h-c------------------------c-ccc--------------------------------
Q 025121 171 -------N---LR---N-K------------------------I-EGS-------------------------------- 179 (257)
Q Consensus 171 -------~---~~---~-~------------------------~-~~~-------------------------------- 179 (257)
. .. . . . ...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (317)
T 1wm1_A 167 SILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLESDD 246 (317)
T ss_dssp TTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHHTGGGCSSTT
T ss_pred hhccchhhcchHHHHHhhhcCCCccccccccccccccccchhhccCCcccccccccchhhhHHHhhhhhhhcccccccch
Confidence 0 00 0 0 0 000
Q ss_pred -hHHHhhhc-CCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCH-HHHHHHHHHHHHhcC
Q 025121 180 -HEAARRAA-SLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVP-KEMDEVCNWLTARLG 251 (257)
Q Consensus 180 -~~~~~~~~-~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~-~~~~~~~~~l~~~l~ 251 (257)
.......+ ++|+|+++|++|.++|++.++.+.+.++ +.++++++++||.+.. +..+.+.+.+.+++.
T Consensus 247 ~~~~~~~~i~~~P~lii~G~~D~~~~~~~~~~l~~~~p-----~~~~~~i~~~gH~~~~~~~~~~~~~~i~~f~~ 316 (317)
T 1wm1_A 247 QLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWP-----EAELHIVEGAGHSYDEPGILHQLMIATDRFAG 316 (317)
T ss_dssp HHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHCT-----TSEEEEETTCCSSTTSHHHHHHHHHHHHHHTC
T ss_pred hhHhhcccccCCCEEEEEecCCCCCCHHHHHHHHhhCC-----CceEEEECCCCCCCCCcchHHHHHHHHHHHhc
Confidence 00011234 4999999999999999999888988887 6699999999998864 467888888877664
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.90 E-value=6.4e-24 Score=166.70 Aligned_cols=184 Identities=14% Similarity=0.087 Sum_probs=130.5
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCC--ceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLPLP--NIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~--g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
...++|||+||++++...|..+++.|++. ||+|+++|+||+|.+.. .....+.+.++++
T Consensus 34 ~~~~~vvllHG~~~~~~~~~~~~~~L~~~~~g~~vi~~D~~G~G~s~~-------------------~~~~~~~~~~~~l 94 (302)
T 1pja_A 34 ASYKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLR-------------------PLWEQVQGFREAV 94 (302)
T ss_dssp -CCCCEEEECCTTCCGGGGHHHHHHHHHHSTTCCEEECCSSCSGGGGS-------------------CHHHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCChhHHHHHHHHHHhcCCCcEEEEeccCCCccchh-------------------hHHHHHHHHHHHH
Confidence 45678999999999999999999999866 89999999998754321 0124566667777
Q ss_pred HHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCccc-ccceEEEeccCCCCchhh----h-----------
Q 025121 110 ANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYV-NLRAVVGLSGWLPGSRNL----R----------- 173 (257)
Q Consensus 110 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~----~----------- 173 (257)
..+++.. ..+++|+||||||.+++.++.+. |+ +++++|++++........ .
T Consensus 95 ~~~~~~~--~~~~~lvGhS~Gg~ia~~~a~~~-----------p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (302)
T 1pja_A 95 VPIMAKA--PQGVHLICYSQGGLVCRALLSVM-----------DDHNVDSFISLSSPQMGQYGDTDYLKWLFPTSMRSNL 161 (302)
T ss_dssp HHHHHHC--TTCEEEEEETHHHHHHHHHHHHC-----------TTCCEEEEEEESCCTTCBCSCCHHHHHHCTTCCHHHH
T ss_pred HHHhhcC--CCcEEEEEECHHHHHHHHHHHhc-----------CccccCEEEEECCCcccccccchhhhhHHHHHHHHHH
Confidence 7776655 34999999999999999999964 66 799999987643211100 0
Q ss_pred --------------hc-c--cc-c------------------------hHHHhhhcCCCEEEEccCCCCcccchhhHHHH
Q 025121 174 --------------NK-I--EG-S------------------------HEAARRAASLPILLTHGLCDDVVPYKYGEKSA 211 (257)
Q Consensus 174 --------------~~-~--~~-~------------------------~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~ 211 (257)
.. . .. . .......++ |+++++|++|.++|++.++.+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~~~~~~~~~ 240 (302)
T 1pja_A 162 YRICYSPWGQEFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVITPWQSSFFG 240 (302)
T ss_dssp HHHHTSTTGGGSTGGGGBCCTTCHHHHHHHCSSHHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSSSGGGGGTC
T ss_pred hhccchHHHHHhhhhhcccChhhhhhhhccchHHHHhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccchhHhhHhh
Confidence 00 0 00 0 011233456 9999999999999998877664
Q ss_pred HHhhh------------------------cCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 212 NCLSI------------------------SGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 212 ~~l~~------------------------~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
+..+. .+ ++++++++++||..+.+..+.+.+.+.+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 301 (302)
T 1pja_A 241 FYDANETVLEMEEQLVYLRDSFGLKTLLARG--AIVRCPMAGISHTAWHSNRTLYETCIEPWL 301 (302)
T ss_dssp EECTTCCEECGGGSHHHHTTTTSHHHHHHTT--CEEEEECSSCCTTTTTSCHHHHHHHTGGGC
T ss_pred hcCCcccccchhhhhhhhhhhhchhhHhhcC--CeEEEEecCccccccccCHHHHHHHHHHhc
Confidence 33221 11 379999999999998777777777666654
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.1e-23 Score=155.38 Aligned_cols=181 Identities=19% Similarity=0.108 Sum_probs=125.1
Q ss_pred CceEEEEEccCCCCccch--HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSW--SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~--~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
+.|+||++||++++...| ..+++.|++.||.|+++|+|++|.+..... . . ..........+++..+.
T Consensus 34 ~~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~------~-~----~~~~~~~~~~~d~~~~i 102 (223)
T 2o2g_A 34 ATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEIDLR------T-R----HLRFDIGLLASRLVGAT 102 (223)
T ss_dssp CCEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHH------H-C----SSTTCHHHHHHHHHHHH
T ss_pred CceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcCCCcCCCCccch------h-h----cccCcHHHHHHHHHHHH
Confidence 678999999999988854 468888887899999999997653221100 0 0 00112333344444444
Q ss_pred HHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhhhcC
Q 025121 111 NLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAAS 188 (257)
Q Consensus 111 ~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (257)
+.+... ....+++++|||+||.+++.++.+. ++++++++++++...... .....++
T Consensus 103 ~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----------~~~v~~~v~~~~~~~~~~-----------~~~~~~~ 160 (223)
T 2o2g_A 103 DWLTHNPDTQHLKVGYFGASTGGGAALVAAAER-----------PETVQAVVSRGGRPDLAP-----------SALPHVK 160 (223)
T ss_dssp HHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHC-----------TTTEEEEEEESCCGGGCT-----------TTGGGCC
T ss_pred HHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhC-----------CCceEEEEEeCCCCCcCH-----------HHHhcCC
Confidence 444433 2334999999999999999999854 778999999988644321 1234567
Q ss_pred CCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCH-----HHHHHHHHHHHHhcC
Q 025121 189 LPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVP-----KEMDEVCNWLTARLG 251 (257)
Q Consensus 189 ~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~-----~~~~~~~~~l~~~l~ 251 (257)
+|+++++|++|.++|.+..+ ..+.+ +. +++++++++++|.+.. +..+.+.+||.+.++
T Consensus 161 ~P~l~i~g~~D~~~~~~~~~-~~~~~---~~-~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 223 (223)
T 2o2g_A 161 APTLLIVGGYDLPVIAMNED-ALEQL---QT-SKRLVIIPRASHLFEEPGALTAVAQLASEWFMHYLR 223 (223)
T ss_dssp SCEEEEEETTCHHHHHHHHH-HHHHC---CS-SEEEEEETTCCTTCCSTTHHHHHHHHHHHHHHHHCC
T ss_pred CCEEEEEccccCCCCHHHHH-HHHhh---CC-CeEEEEeCCCCcccCChHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999854433 33332 22 7899999999998763 246778888887663
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.90 E-value=5.3e-23 Score=168.17 Aligned_cols=198 Identities=17% Similarity=0.152 Sum_probs=136.6
Q ss_pred CCCceEEeCCCCCCceEEEEEccCCCCccc-hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCc
Q 025121 20 EFGRTHVVRPKGKHQATIVWLHGLGDNGSS-WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPED 98 (257)
Q Consensus 20 ~~~~~~~~~~~~~~~~~vi~~HG~~~~~~~-~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~ 98 (257)
.+...++.++...+.|+||++||++++... |..+.+.|...||.|+++|+|++|.+.... ..
T Consensus 179 ~l~~~~~~P~~~~~~P~vv~~hG~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~---------------~~-- 241 (415)
T 3mve_A 179 KITAHLHLTNTDKPHPVVIVSAGLDSLQTDMWRLFRDHLAKHDIAMLTVDMPSVGYSSKYP---------------LT-- 241 (415)
T ss_dssp EEEEEEEESCSSSCEEEEEEECCTTSCGGGGHHHHHHTTGGGTCEEEEECCTTSGGGTTSC---------------CC--
T ss_pred EEEEEEEecCCCCCCCEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCC---------------CC--
Confidence 333444445555678999999999988554 556678887889999999999876543210 00
Q ss_pred hhhHHHHHHHHHHHhccCC--CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhh--
Q 025121 99 WEGLDASAAHIANLLSTEP--ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN-- 174 (257)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-- 174 (257)
.+.......+.+++.... +..+++|+|||+||++++.++... +++++++|++++.+........
T Consensus 242 -~~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~-----------~~~v~~~v~~~~~~~~~~~~~~~~ 309 (415)
T 3mve_A 242 -EDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLE-----------QEKIKACVILGAPIHDIFASPQKL 309 (415)
T ss_dssp -SCTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHT-----------TTTCCEEEEESCCCSHHHHCHHHH
T ss_pred -CCHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhC-----------CcceeEEEEECCccccccccHHHH
Confidence 112333456666666553 235999999999999999999853 7899999999887431100000
Q ss_pred ---------------------------ccccchHHH-----hhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceee
Q 025121 175 ---------------------------KIEGSHEAA-----RRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHL 222 (257)
Q Consensus 175 ---------------------------~~~~~~~~~-----~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~ 222 (257)
.+....... ...+++|+|+++|++|.++|.+.+..+.+..+ ++
T Consensus 310 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~~~~-----~~ 384 (415)
T 3mve_A 310 QQMPKMYLDVLASRLGKSVVDIYSLSGQMAAWSLKVQGFLSSRKTKVPILAMSLEGDPVSPYSDNQMVAFFST-----YG 384 (415)
T ss_dssp TTSCHHHHHHHHHHTTCSSBCHHHHHHHGGGGCTTTTTTTTSSCBSSCEEEEEETTCSSSCHHHHHHHHHTBT-----TC
T ss_pred HHhHHHHHHHHHHHhCCCccCHHHHHHHHhhcCcccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-----Cc
Confidence 000000000 13668999999999999999998888877544 67
Q ss_pred EEEEecC-CCCccCHHHHHHHHHHHHHhcC
Q 025121 223 TFKSFEG-LGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 223 ~~~~~~g-~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
+++++++ ..|....+..+.+.+||.+.+.
T Consensus 385 ~l~~i~g~~~h~~~~~~~~~i~~fL~~~L~ 414 (415)
T 3mve_A 385 KAKKISSKTITQGYEQSLDLAIKWLEDELL 414 (415)
T ss_dssp EEEEECCCSHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEecCCCcccchHHHHHHHHHHHHHHhc
Confidence 9999998 4444446678899999998774
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-22 Score=148.04 Aligned_cols=164 Identities=17% Similarity=0.125 Sum_probs=118.3
Q ss_pred CceEEEEEccCCCCc-cchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNG-SSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
+.++|||+||++++. ..|......+...++. +|.|+.+ ..++.+.++++.+
T Consensus 16 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~~~~---v~~~~~~-------------------------~~~~~~~~~~~~~ 67 (191)
T 3bdv_A 16 QQLTMVLVPGLRDSDDEHWQSHWERRFPHWQR---IRQREWY-------------------------QADLDRWVLAIRR 67 (191)
T ss_dssp TTCEEEEECCTTCCCTTSHHHHHHHHCTTSEE---CCCSCCS-------------------------SCCHHHHHHHHHH
T ss_pred CCceEEEECCCCCCchhhHHHHHHHhcCCeEE---EeccCCC-------------------------CcCHHHHHHHHHH
Confidence 457999999999888 6677766643334444 4444210 1234556667777
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhhhcCCCE
Q 025121 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPI 191 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 191 (257)
+++... ++++|+||||||.+++.++.+ ++++++++++++++......+... .....+++|+
T Consensus 68 ~~~~~~--~~~~l~G~S~Gg~~a~~~a~~-----------~p~~v~~lvl~~~~~~~~~~~~~~------~~~~~~~~P~ 128 (191)
T 3bdv_A 68 ELSVCT--QPVILIGHSFGALAACHVVQQ-----------GQEGIAGVMLVAPAEPMRFEIDDR------IQASPLSVPT 128 (191)
T ss_dssp HHHTCS--SCEEEEEETHHHHHHHHHHHT-----------TCSSEEEEEEESCCCGGGGTCTTT------SCSSCCSSCE
T ss_pred HHHhcC--CCeEEEEEChHHHHHHHHHHh-----------cCCCccEEEEECCCccccccCccc------cccccCCCCE
Confidence 776543 499999999999999999995 488999999999877654332211 2234568999
Q ss_pred EEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCH-------HHHHHHHHHHHHh
Q 025121 192 LLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVP-------KEMDEVCNWLTAR 249 (257)
Q Consensus 192 l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~-------~~~~~~~~~l~~~ 249 (257)
++++|++|.++|.+.++.+.+.+ +.++++++++||.... +..+.+.+|+.+.
T Consensus 129 lii~g~~D~~~~~~~~~~~~~~~------~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 187 (191)
T 3bdv_A 129 LTFASHNDPLMSFTRAQYWAQAW------DSELVDVGEAGHINAEAGFGPWEYGLKRLAEFSEIL 187 (191)
T ss_dssp EEEECSSBTTBCHHHHHHHHHHH------TCEEEECCSCTTSSGGGTCSSCHHHHHHHHHHHHTT
T ss_pred EEEecCCCCcCCHHHHHHHHHhc------CCcEEEeCCCCcccccccchhHHHHHHHHHHHHHHh
Confidence 99999999999999988888876 3589999999998763 3345566666554
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-23 Score=177.64 Aligned_cols=187 Identities=14% Similarity=0.171 Sum_probs=134.3
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
..|+|||+||++++...|..+++.|+..||.|+++|+||+|.+.... .....++.+.++++..+
T Consensus 257 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~D~~G~G~S~~~~----------------~~~~~~~~~~~~d~~~~ 320 (555)
T 3i28_A 257 SGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPP----------------EIEEYCMEVLCKEMVTF 320 (555)
T ss_dssp SSSEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTSCCCS----------------CGGGGSHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCchhHHHHHHHHHHhCCCEEEEecCCCCCCCCCCC----------------CcccccHHHHHHHHHHH
Confidence 46799999999999999999999998889999999999876543211 11123455556666666
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhh--------------------
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL-------------------- 172 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-------------------- 172 (257)
++..... +++|+||||||.+++.++.+. |+++++++++++........
T Consensus 321 ~~~l~~~-~~~lvGhS~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (555)
T 3i28_A 321 LDKLGLS-QAVFIGHDWGGMLVWYMALFY-----------PERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLYFQ 388 (555)
T ss_dssp HHHHTCS-CEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESCCCCCCCTTSCHHHHHHTCGGGHHHHHHH
T ss_pred HHHcCCC-cEEEEEecHHHHHHHHHHHhC-----------hHheeEEEEEccCCCCCCcccchHHHHhcCCccchhHHhh
Confidence 6554333 999999999999999999964 88999999987643211000
Q ss_pred -----------------hhcccc---------------------------------------------------------
Q 025121 173 -----------------RNKIEG--------------------------------------------------------- 178 (257)
Q Consensus 173 -----------------~~~~~~--------------------------------------------------------- 178 (257)
......
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (555)
T 3i28_A 389 EPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRN 468 (555)
T ss_dssp STTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHTTTTTHHHHHTTSC
T ss_pred CCCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHHHHHHhcccchhHHHHHHh
Confidence 000000
Q ss_pred -------chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHH----HHHHHHHHH
Q 025121 179 -------SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKE----MDEVCNWLT 247 (257)
Q Consensus 179 -------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~----~~~~~~~l~ 247 (257)
........+++|+++++|++|.++|.+.++.+.+.++ ++++++++++||....+. .+.+.+||.
T Consensus 469 ~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 543 (555)
T 3i28_A 469 MERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIP-----HLKRGHIEDCGHWTQMDKPTEVNQILIKWLD 543 (555)
T ss_dssp HHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCT-----TCEEEEETTCCSCHHHHSHHHHHHHHHHHHH
T ss_pred ccccchhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhCC-----CceEEEeCCCCCCcchhCHHHHHHHHHHHHH
Confidence 0000112567999999999999999999888888776 678999999999987443 456677777
Q ss_pred HhcCc
Q 025121 248 ARLGL 252 (257)
Q Consensus 248 ~~l~~ 252 (257)
+....
T Consensus 544 ~~~~~ 548 (555)
T 3i28_A 544 SDARN 548 (555)
T ss_dssp HHTCC
T ss_pred hccCC
Confidence 66544
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.1e-22 Score=174.20 Aligned_cols=200 Identities=18% Similarity=0.119 Sum_probs=142.8
Q ss_pred CCceEEEEEccCCCCcc--chHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGS--SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
++.|+||++||.+++.. .|..+++.|+..||.|+++|+|+.+ +++ .+|.... . .......+.+....+
T Consensus 422 ~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~~-----~~G-~~~~~~~-~---~~~~~~~~~d~~~~~ 491 (662)
T 3azo_A 422 ELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYGGST-----GYG-RAYRERL-R---GRWGVVDVEDCAAVA 491 (662)
T ss_dssp CCCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEEECTTCS-----SSC-HHHHHTT-T---TTTTTHHHHHHHHHH
T ss_pred CCccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEECCCCCC-----Ccc-HHHHHhh-c---cccccccHHHHHHHH
Confidence 45789999999987665 6888888888889999999998732 111 1111110 0 011123455556666
Q ss_pred HHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh-----------h-cc
Q 025121 110 ANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR-----------N-KI 176 (257)
Q Consensus 110 ~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-----------~-~~ 176 (257)
..++++. ...++++|+|||+||++++.++.+ +++++++++++|......... . .+
T Consensus 492 ~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~------------~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (662)
T 3azo_A 492 TALAEEGTADRARLAVRGGSAGGWTAASSLVS------------TDVYACGTVLYPVLDLLGWADGGTHDFESRYLDFLI 559 (662)
T ss_dssp HHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH------------CCCCSEEEEESCCCCHHHHHTTCSCGGGTTHHHHHT
T ss_pred HHHHHcCCcChhhEEEEEECHHHHHHHHHHhC------------cCceEEEEecCCccCHHHHhcccccchhhHhHHHHh
Confidence 6666553 334599999999999999998873 788999999988654322111 0 00
Q ss_pred -----------ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC-----HHHHH
Q 025121 177 -----------EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-----PKEMD 240 (257)
Q Consensus 177 -----------~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-----~~~~~ 240 (257)
...+......+++|+|+++|++|.++|++.++++++.++..+. +++++++++++|.+. .+..+
T Consensus 560 ~~~~~~~~~~~~~sp~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~-~~~~~~~~~~gH~~~~~~~~~~~~~ 638 (662)
T 3azo_A 560 GSFEEFPERYRDRAPLTRADRVRVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGV-PHAYLSFEGEGHGFRRKETMVRALE 638 (662)
T ss_dssp CCTTTCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHTTSCC-CEEEEEETTCCSSCCSHHHHHHHHH
T ss_pred CCCccchhHHHhhChHhHhccCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHcCC-CEEEEEECCCCCCCCChHHHHHHHH
Confidence 0112223456789999999999999999999999999998877 789999999999875 34578
Q ss_pred HHHHHHHHhcCcCC
Q 025121 241 EVCNWLTARLGLEG 254 (257)
Q Consensus 241 ~~~~~l~~~l~~~~ 254 (257)
.+.+||.+.++...
T Consensus 639 ~~~~fl~~~l~~~~ 652 (662)
T 3azo_A 639 AELSLYAQVFGVEV 652 (662)
T ss_dssp HHHHHHHHHTTCCC
T ss_pred HHHHHHHHHhCCCC
Confidence 89999999887543
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.3e-22 Score=159.38 Aligned_cols=214 Identities=14% Similarity=0.055 Sum_probs=136.6
Q ss_pred CCceEEeCCC-CCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCc--------ccc---cccC
Q 025121 21 FGRTHVVRPK-GKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFP--------CTA---WFDV 88 (257)
Q Consensus 21 ~~~~~~~~~~-~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~--------~~~---w~~~ 88 (257)
+...++.++. +++.|+||++||++++...+. ....++..||.|+++|.|++|.+...+.. ... |...
T Consensus 81 i~~~~~~P~~~~~~~p~vv~~HG~g~~~~~~~-~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~p~~~~~~~~~~~~~~ 159 (337)
T 1vlq_A 81 IKGWLLVPKLEEEKLPCVVQYIGYNGGRGFPH-DWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMTR 159 (337)
T ss_dssp EEEEEEEECCSCSSEEEEEECCCTTCCCCCGG-GGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCSSSBCCCCSSSTTT
T ss_pred EEEEEEecCCCCCCccEEEEEcCCCCCCCCch-hhcchhhCCCEEEEecCCCCCCcccCCCCcccccccCCCCCCccccc
Confidence 3334444444 456799999999998865543 34445568999999999998754321100 011 1111
Q ss_pred CCCCCCCCCchhhHHHHHHHHHHHhccCC--CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCC
Q 025121 89 GELSDDGPEDWEGLDASAAHIANLLSTEP--ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWL 166 (257)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 166 (257)
+ .............+++..+.+.+.... +..+++|+|||+||.+++.++.+. + +++++++.++++
T Consensus 160 g-~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~-----------p-~v~~~vl~~p~~ 226 (337)
T 1vlq_A 160 G-ILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALS-----------K-KAKALLCDVPFL 226 (337)
T ss_dssp T-TTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHC-----------S-SCCEEEEESCCS
T ss_pred C-CCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcC-----------C-CccEEEECCCcc
Confidence 1 111111111122233333333333322 235999999999999999999863 4 699999888865
Q ss_pred CCchhhhh------------cc---------------ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCc
Q 025121 167 PGSRNLRN------------KI---------------EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGF 219 (257)
Q Consensus 167 ~~~~~~~~------------~~---------------~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~ 219 (257)
........ .+ ..........+++|+|+++|+.|.++|++.+..+++.++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~p~~~~~~~~~~l~~--- 303 (337)
T 1vlq_A 227 CHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAG--- 303 (337)
T ss_dssp CCHHHHHHHCCCTTHHHHHHHHHHCTTCHHHHHHHHHTTCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCS---
T ss_pred cCHHHHHhcCCCcchHHHHHHHHhCchhHHHHHHhhhhccHHHHHHHcCCCEEEEeeCCCCCCCchhHHHHHHhcCC---
Confidence 43211110 00 0011123456789999999999999999999999999874
Q ss_pred eeeEEEEecCCCCccC-HHHHHHHHHHHHHhcCc
Q 025121 220 RHLTFKSFEGLGHYTV-PKEMDEVCNWLTARLGL 252 (257)
Q Consensus 220 ~~~~~~~~~g~~H~~~-~~~~~~~~~~l~~~l~~ 252 (257)
+++++++++++|.+. .+..+.+.+||.+.++.
T Consensus 304 -~~~~~~~~~~gH~~~~~~~~~~~~~fl~~~l~~ 336 (337)
T 1vlq_A 304 -PKEIRIYPYNNHEGGGSFQAVEQVKFLKKLFEK 336 (337)
T ss_dssp -SEEEEEETTCCTTTTHHHHHHHHHHHHHHHHC-
T ss_pred -CcEEEEcCCCCCCCcchhhHHHHHHHHHHHHhc
Confidence 478999999999965 56778999999998753
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=6.9e-23 Score=158.97 Aligned_cols=103 Identities=12% Similarity=0.028 Sum_probs=81.4
Q ss_pred CCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025121 31 GKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
+...|+|||+||++++...|..++..|+ .+|+|+++|+||||.+.... ...++.+.++++.
T Consensus 24 G~~~p~vvllHG~~~~~~~w~~~~~~L~-~~~rvia~DlrGhG~S~~~~------------------~~~~~~~~a~dl~ 84 (276)
T 2wj6_A 24 DTDGPAILLLPGWCHDHRVYKYLIQELD-ADFRVIVPNWRGHGLSPSEV------------------PDFGYQEQVKDAL 84 (276)
T ss_dssp CCSSCEEEEECCTTCCGGGGHHHHHHHT-TTSCEEEECCTTCSSSCCCC------------------CCCCHHHHHHHHH
T ss_pred CCCCCeEEEECCCCCcHHHHHHHHHHHh-cCCEEEEeCCCCCCCCCCCC------------------CCCCHHHHHHHHH
Confidence 4455789999999999999999999997 57999999999987543211 1234566666676
Q ss_pred HHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCc-ccccceEEEecc
Q 025121 111 NLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPY-YVNLRAVVGLSG 164 (257)
Q Consensus 111 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~ 164 (257)
.+++..... +++|+||||||.+++.++.+ + |++++++|++++
T Consensus 85 ~ll~~l~~~-~~~lvGhSmGG~va~~~A~~-----------~~P~rv~~lvl~~~ 127 (276)
T 2wj6_A 85 EILDQLGVE-TFLPVSHSHGGWVLVELLEQ-----------AGPERAPRGIIMDW 127 (276)
T ss_dssp HHHHHHTCC-SEEEEEEGGGHHHHHHHHHH-----------HHHHHSCCEEEESC
T ss_pred HHHHHhCCC-ceEEEEECHHHHHHHHHHHH-----------hCHHhhceEEEecc
Confidence 777665444 89999999999999999984 5 788999988864
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-22 Score=158.90 Aligned_cols=200 Identities=16% Similarity=0.085 Sum_probs=134.1
Q ss_pred eEEeCCCCCCceEEEEEccCC---CCccchHHHhhcCCCC-ceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCch
Q 025121 24 THVVRPKGKHQATIVWLHGLG---DNGSSWSQLLESLPLP-NIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDW 99 (257)
Q Consensus 24 ~~~~~~~~~~~~~vi~~HG~~---~~~~~~~~~~~~l~~~-g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~ 99 (257)
.++.+..+.+.|+|||+||.+ ++...|..+++.|+.. |+.|+++|+|++|... .+...
T Consensus 63 ~~~~p~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~g~~~------------------~~~~~ 124 (311)
T 2c7b_A 63 RVYFPKKAAGLPAVLYYHGGGFVFGSIETHDHICRRLSRLSDSVVVSVDYRLAPEYK------------------FPTAV 124 (311)
T ss_dssp EEEESSSCSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTCEEEEECCCCTTTSC------------------TTHHH
T ss_pred EEEecCCCCCCcEEEEECCCcccCCChhhhHHHHHHHHHhcCCEEEEecCCCCCCCC------------------CCccH
Confidence 344444445678999999988 8888899999998754 9999999998764321 11123
Q ss_pred hhHHHHHHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCC----chhhh-
Q 025121 100 EGLDASAAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPG----SRNLR- 173 (257)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~- 173 (257)
.++.+.++++.+.++... ..++++|+|||+||.+++.++.+.+.. ....+++++++++++.. .....
T Consensus 125 ~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~-------~~~~~~~~vl~~p~~~~~~~~~~~~~~ 197 (311)
T 2c7b_A 125 EDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNS-------GEKLVKKQVLIYPVVNMTGVPTASLVE 197 (311)
T ss_dssp HHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHT-------TCCCCSEEEEESCCCCCSSCCCHHHHH
T ss_pred HHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhc-------CCCCceeEEEECCccCCccccccCCcc
Confidence 444455555554443322 225899999999999999999864210 02358999999987762 11000
Q ss_pred ------------------hcc-cc---------chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEE
Q 025121 174 ------------------NKI-EG---------SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFK 225 (257)
Q Consensus 174 ------------------~~~-~~---------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~ 225 (257)
..+ .. .+.......-.|+++++|++|.+++ ....+.+.++..+. +++++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~P~lii~G~~D~~~~--~~~~~~~~l~~~g~-~~~~~ 274 (311)
T 2c7b_A 198 FGVAETTSLPIELMVWFGRQYLKRPEEAYDFKASPLLADLGGLPPALVVTAEYDPLRD--EGELYAYKMKASGS-RAVAV 274 (311)
T ss_dssp HHHCTTCSSCHHHHHHHHHHHCSSTTGGGSTTTCGGGSCCTTCCCEEEEEETTCTTHH--HHHHHHHHHHHTTC-CEEEE
T ss_pred HHHhccCCCCHHHHHHHHHHhCCCCccccCcccCcccccccCCCcceEEEcCCCCchH--HHHHHHHHHHHCCC-CEEEE
Confidence 000 00 0000000112399999999999986 45667788887776 78999
Q ss_pred EecCCCCccC---------HHHHHHHHHHHHHhcC
Q 025121 226 SFEGLGHYTV---------PKEMDEVCNWLTARLG 251 (257)
Q Consensus 226 ~~~g~~H~~~---------~~~~~~~~~~l~~~l~ 251 (257)
+++|++|.+. .+..+.+.+||++.+.
T Consensus 275 ~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (311)
T 2c7b_A 275 RFAGMVHGFVSFYPFVDAGREALDLAAASIRSGLQ 309 (311)
T ss_dssp EETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHTC
T ss_pred EeCCCccccccccccCHHHHHHHHHHHHHHHHHhc
Confidence 9999999875 3457888999988765
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.5e-23 Score=165.77 Aligned_cols=192 Identities=11% Similarity=0.082 Sum_probs=123.4
Q ss_pred CceEEEEEccCCCCccchHHHhh------cCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH-H
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLE------SLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA-S 105 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~------~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~-~ 105 (257)
+.|+||++||++++...|..+.. .|++.||.|+++|+||+|.+........ .. ..........+.+ +
T Consensus 57 ~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~G~S~~~~~~~~-----~~-~~~~~~~~~~~~~~D 130 (377)
T 1k8q_A 57 RRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYYSP-----DS-VEFWAFSFDEMAKYD 130 (377)
T ss_dssp TCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTTSCEESSSCT-----TS-TTTTCCCHHHHHHTH
T ss_pred CCCeEEEECCCCCchhhhhcCCCcccHHHHHHHCCCCEEEecCCCCCCCCCCCCCCC-----Cc-ccccCccHHHHHhhh
Confidence 67899999999999988876655 7777899999999998876543110000 00 0000112233332 3
Q ss_pred HHHHHH-HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCccc---ccceEEEeccCCCCch---hh------
Q 025121 106 AAHIAN-LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYV---NLRAVVGLSGWLPGSR---NL------ 172 (257)
Q Consensus 106 ~~~~~~-~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~---~~------ 172 (257)
+..+.+ +++... .++++|+||||||.+++.++.+. |+ +++++|++++...... ..
T Consensus 131 ~~~~i~~~~~~~~-~~~~~lvG~S~Gg~ia~~~a~~~-----------p~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 198 (377)
T 1k8q_A 131 LPATIDFILKKTG-QDKLHYVGHSQGTTIGFIAFSTN-----------PKLAKRIKTFYALAPVATVKYTETLINKLMLV 198 (377)
T ss_dssp HHHHHHHHHHHHC-CSCEEEEEETHHHHHHHHHHHHC-----------HHHHTTEEEEEEESCCSCCSSCCSGGGGGGTS
T ss_pred HHHHHHHHHHhcC-cCceEEEEechhhHHHHHHHhcC-----------chhhhhhhEEEEeCCchhcccchhHHHHHHhh
Confidence 333322 222222 24899999999999999999854 66 7999998887532110 00
Q ss_pred --------------------hh----c-----------------------------------------------------
Q 025121 173 --------------------RN----K----------------------------------------------------- 175 (257)
Q Consensus 173 --------------------~~----~----------------------------------------------------- 175 (257)
.. .
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (377)
T 1k8q_A 199 PSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPAGTSVQNVLHWSQA 278 (377)
T ss_dssp CHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHHHTTCCCCEEHHHHHHHHHH
T ss_pred ccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCcccCCHHHHHHHhccCCCCccHHHHHHHHHH
Confidence 00 0
Q ss_pred -----cccc-------h----------HHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeE-EEEecCCCC
Q 025121 176 -----IEGS-------H----------EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLT-FKSFEGLGH 232 (257)
Q Consensus 176 -----~~~~-------~----------~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~-~~~~~g~~H 232 (257)
+... . ......+++|+|+++|++|.++|++.++.+.+.++ +.+ +++++++||
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH 353 (377)
T 1k8q_A 279 VKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLP-----NLIYHRKIPPYNH 353 (377)
T ss_dssp HHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHTTCT-----TEEEEEEETTCCT
T ss_pred HhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccCHHHHHHHHHhCc-----CcccEEecCCCCc
Confidence 0000 0 00145678999999999999999999998888887 334 899999999
Q ss_pred ccCH---HHH----HHHHHHHH
Q 025121 233 YTVP---KEM----DEVCNWLT 247 (257)
Q Consensus 233 ~~~~---~~~----~~~~~~l~ 247 (257)
.... +.. +.+.+||.
T Consensus 354 ~~~~~~~~~~~~~~~~i~~fl~ 375 (377)
T 1k8q_A 354 LDFIWAMDAPQAVYNEIVSMMG 375 (377)
T ss_dssp THHHHCTTHHHHTHHHHHHHHH
T ss_pred eEEEecCCcHHHHHHHHHHHhc
Confidence 8763 443 55556654
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=99.89 E-value=5.2e-23 Score=160.16 Aligned_cols=187 Identities=13% Similarity=0.023 Sum_probs=123.2
Q ss_pred CceEEEEEccCCCCccc-hHH-----HhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025121 33 HQATIVWLHGLGDNGSS-WSQ-----LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~-~~~-----~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
.+|+|||+||++++... |.. +++.|+ .+|.|+++|+||+|.+..... ......++.+.+
T Consensus 34 ~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L~-~~~~vi~~D~~G~G~s~~~~~--------------~~~~~~~~~~~~ 98 (286)
T 2qmq_A 34 KRPAIFTYHDVGLNYKSCFQPLFRFGDMQEII-QNFVRVHVDAPGMEEGAPVFP--------------LGYQYPSLDQLA 98 (286)
T ss_dssp TCCEEEEECCTTCCHHHHHHHHHTSHHHHHHH-TTSCEEEEECTTTSTTCCCCC--------------TTCCCCCHHHHH
T ss_pred CCCeEEEeCCCCCCchhhhhhhhhhchhHHHh-cCCCEEEecCCCCCCCCCCCC--------------CCCCccCHHHHH
Confidence 57899999999999875 665 677786 469999999998865432110 000012445556
Q ss_pred HHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh---------------
Q 025121 107 AHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN--------------- 171 (257)
Q Consensus 107 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--------------- 171 (257)
+++.++++..... +++|+||||||.+++.++.+. |+++++++++++.......
T Consensus 99 ~~l~~~l~~l~~~-~~~lvG~S~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (286)
T 2qmq_A 99 DMIPCILQYLNFS-TIIGVGVGAGAYILSRYALNH-----------PDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSI 166 (286)
T ss_dssp HTHHHHHHHHTCC-CEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESCCCCCCCHHHHHHHHHHHTTSCH
T ss_pred HHHHHHHHHhCCC-cEEEEEEChHHHHHHHHHHhC-----------hhheeeEEEECCCCcccchhhhhhhhhccccccc
Confidence 6666666554333 899999999999999999854 8899999999874321100
Q ss_pred ---hh-hccc--------------------cch--------------------HHHhhhcCCCEEEEccCCCCcccchhh
Q 025121 172 ---LR-NKIE--------------------GSH--------------------EAARRAASLPILLTHGLCDDVVPYKYG 207 (257)
Q Consensus 172 ---~~-~~~~--------------------~~~--------------------~~~~~~~~~P~l~~~G~~D~~v~~~~~ 207 (257)
.. ..+. ... ......+++|+++++|++|.++| ...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-~~~ 245 (286)
T 2qmq_A 167 PDMILGHLFSQEELSGNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAPHED-AVV 245 (286)
T ss_dssp HHHHHHHHSCHHHHHTTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEEEEETTSTTHH-HHH
T ss_pred hHHHHHHHhcCCCCCcchHHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEEEecCCCcccc-HHH
Confidence 00 0000 000 00123567999999999999998 333
Q ss_pred HHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 208 EKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 208 ~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
+.+.+.++ +++++++++++||.+..+..+.+.+.+.+++.
T Consensus 246 ~~~~~~~~----~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 246 ECNSKLDP----TQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQ 285 (286)
T ss_dssp HHHHHSCG----GGEEEEEETTCTTCHHHHCHHHHHHHHHHHHC
T ss_pred HHHHHhcC----CCceEEEeCCCCCcccccChHHHHHHHHHHhc
Confidence 33333222 15799999999999986666666666666553
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.89 E-value=4.9e-23 Score=149.82 Aligned_cols=168 Identities=17% Similarity=0.148 Sum_probs=118.9
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCce---EEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNI---KWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~---~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
.+|+|||+||++++...|..+++.|.+.|| .|+++|+|++|.+ ......+..+++
T Consensus 2 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~~~~v~~~d~~g~g~s----------------------~~~~~~~~~~~~ 59 (181)
T 1isp_A 2 EHNPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGT----------------------NYNNGPVLSRFV 59 (181)
T ss_dssp CCCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEECCCSCTTCC----------------------HHHHHHHHHHHH
T ss_pred CCCeEEEECCcCCCHhHHHHHHHHHHHcCCCCccEEEEecCCCCCc----------------------hhhhHHHHHHHH
Confidence 356899999999999999999999987887 6999999865421 123345555556
Q ss_pred HHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhhhcCC
Q 025121 110 ANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASL 189 (257)
Q Consensus 110 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (257)
..+++.... .+++|+||||||.+++.++.+. ..+.++++++++++....... ..+.. .....++
T Consensus 60 ~~~~~~~~~-~~~~lvG~S~Gg~~a~~~~~~~---------~~~~~v~~~v~~~~~~~~~~~--~~~~~----~~~~~~~ 123 (181)
T 1isp_A 60 QKVLDETGA-KKVDIVAHSMGGANTLYYIKNL---------DGGNKVANVVTLGGANRLTTG--KALPG----TDPNQKI 123 (181)
T ss_dssp HHHHHHHCC-SCEEEEEETHHHHHHHHHHHHS---------SGGGTEEEEEEESCCGGGTCS--BCCCC----SCTTCCC
T ss_pred HHHHHHcCC-CeEEEEEECccHHHHHHHHHhc---------CCCceEEEEEEEcCccccccc--ccCCC----CCCccCC
Confidence 555554433 3899999999999999999852 126789999999886543211 01111 0123478
Q ss_pred CEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHH---HHHHHHHHHHH
Q 025121 190 PILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPK---EMDEVCNWLTA 248 (257)
Q Consensus 190 P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~---~~~~~~~~l~~ 248 (257)
|+++++|++|.++|++.++ ++ +.+++++++++|....+ ..+.+.+||.+
T Consensus 124 p~l~i~G~~D~~v~~~~~~-----~~-----~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~ 175 (181)
T 1isp_A 124 LYTSIYSSADMIVMNYLSR-----LD-----GARNVQIHGVGHIGLLYSSQVNSLIKEGLNG 175 (181)
T ss_dssp EEEEEEETTCSSSCHHHHC-----CB-----TSEEEEESSCCTGGGGGCHHHHHHHHHHHTT
T ss_pred cEEEEecCCCccccccccc-----CC-----CCcceeeccCchHhhccCHHHHHHHHHHHhc
Confidence 9999999999999987431 22 67899999999997643 34445555543
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.89 E-value=3.4e-22 Score=158.41 Aligned_cols=199 Identities=14% Similarity=0.107 Sum_probs=132.5
Q ss_pred EEeCCCCCCceEEEEEccCC---CCccchHHHhhcCCC-CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchh
Q 025121 25 HVVRPKGKHQATIVWLHGLG---DNGSSWSQLLESLPL-PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWE 100 (257)
Q Consensus 25 ~~~~~~~~~~~~vi~~HG~~---~~~~~~~~~~~~l~~-~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~ 100 (257)
++.++...+.|+||++||.+ ++...|..++..|+. .|+.|+++|+|+.+.. .. ..
T Consensus 71 ~~~p~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~------------------~~---~~ 129 (322)
T 3fak_A 71 WVRAPGCQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEH------------------PF---PA 129 (322)
T ss_dssp EEECTTCCTTCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECCCCTTTS------------------CT---TH
T ss_pred EEeCCCCCCccEEEEEcCCccccCChHHHHHHHHHHHHhcCCEEEEEeCCCCCCC------------------CC---Cc
Confidence 33344456789999999966 566667778888764 5999999998743210 01 22
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc----
Q 025121 101 GLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI---- 176 (257)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---- 176 (257)
.+.+....+..+.+...+..+|+|+|+|+||.+++.++.+.+.. ....++++++++|++..........
T Consensus 130 ~~~D~~~a~~~l~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~-------~~~~~~~~vl~~p~~~~~~~~~~~~~~~~ 202 (322)
T 3fak_A 130 AVEDGVAAYRWLLDQGFKPQHLSISGDSAGGGLVLAVLVSARDQ-------GLPMPASAIPISPWADMTCTNDSFKTRAE 202 (322)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHHHHT-------TCCCCSEEEEESCCCCTTCCCTHHHHTTT
T ss_pred HHHHHHHHHHHHHHcCCCCceEEEEEcCcCHHHHHHHHHHHHhc-------CCCCceEEEEECCEecCcCCCcCHHHhCc
Confidence 33444444444443334456999999999999999999864210 0234899999999765431110000
Q ss_pred -----c---------------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCC
Q 025121 177 -----E---------------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGL 230 (257)
Q Consensus 177 -----~---------------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~ 230 (257)
. ..+.........|+++++|+.|.++ +.+..+++++++.++ ++++++++|+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~g~~D~~~--~~~~~~~~~l~~~g~-~~~~~~~~g~ 279 (322)
T 3fak_A 203 ADPMVAPGGINKMAARYLNGADAKHPYASPNFANLKGLPPLLIHVGRDEVLL--DDSIKLDAKAKADGV-KSTLEIWDDM 279 (322)
T ss_dssp TCCSCCSSHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEETTSTTH--HHHHHHHHHHHHTTC-CEEEEEETTC
T ss_pred cCcccCHHHHHHHHHHhcCCCCCCCcccCCCcccccCCChHhEEEcCcCccH--HHHHHHHHHHHHcCC-CEEEEEeCCc
Confidence 0 0000001112359999999999884 567889999999988 8999999999
Q ss_pred CCccC---------HHHHHHHHHHHHHhcCcCC
Q 025121 231 GHYTV---------PKEMDEVCNWLTARLGLEG 254 (257)
Q Consensus 231 ~H~~~---------~~~~~~~~~~l~~~l~~~~ 254 (257)
+|.+. .+..+.+.+||++.++...
T Consensus 280 ~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~~ 312 (322)
T 3fak_A 280 IHVWHAFHPMLPEGKQAIVRVGEFMREQWAALA 312 (322)
T ss_dssp CTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC--
T ss_pred eeehhhccCCCHHHHHHHHHHHHHHHHHHhcch
Confidence 99864 3457899999999887543
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4.7e-22 Score=164.38 Aligned_cols=199 Identities=15% Similarity=0.128 Sum_probs=132.1
Q ss_pred CceEEEEEccCCCCccc---hHHHhh---cCCCCceEEEccCCCCCCcccCCCCcccccccCCCCC--CCCCCchhhHHH
Q 025121 33 HQATIVWLHGLGDNGSS---WSQLLE---SLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELS--DDGPEDWEGLDA 104 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~---~~~~~~---~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~--~~~~~~~~~~~~ 104 (257)
..++|||+||++++... |..++. .|...+|.|+++|+|||+.+.+....... ..... ........++.+
T Consensus 108 ~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~~~~~~---~~~~~~~~~~~f~~~t~~~ 184 (444)
T 2vat_A 108 RDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDP---DAEGQRPYGAKFPRTTIRD 184 (444)
T ss_dssp SCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCT---TTC--CBCGGGCCCCCHHH
T ss_pred CCCeEEEECCCCcccchhhHHHHhcCccchhhccCCEEEEecCCCCCCCCCCCCCCCc---ccccccccccccccccHHH
Confidence 35799999999999998 888875 57568999999999985332221100000 00000 000001235566
Q ss_pred HHHHHHHHhccCCCCce-EEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh------------
Q 025121 105 SAAHIANLLSTEPADVK-VGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN------------ 171 (257)
Q Consensus 105 ~~~~~~~~~~~~~~~~~-i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------------ 171 (257)
.++++..+++..... + ++|+||||||.+++.++.+ +|++++++|++++.......
T Consensus 185 ~a~dl~~ll~~l~~~-~~~~lvGhSmGG~ial~~A~~-----------~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~ 252 (444)
T 2vat_A 185 DVRIHRQVLDRLGVR-QIAAVVGASMGGMHTLEWAFF-----------GPEYVRKIVPIATSCRQSGWCAAWFETQRQCI 252 (444)
T ss_dssp HHHHHHHHHHHHTCC-CEEEEEEETHHHHHHHHHGGG-----------CTTTBCCEEEESCCSBCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCc-cceEEEEECHHHHHHHHHHHh-----------ChHhhheEEEEeccccCCccchhHHHHHHHHH
Confidence 666666666654444 6 9999999999999999985 48889999998875432100
Q ss_pred -------------------------------------hhhcc----c---------------------------------
Q 025121 172 -------------------------------------LRNKI----E--------------------------------- 177 (257)
Q Consensus 172 -------------------------------------~~~~~----~--------------------------------- 177 (257)
+...+ .
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (444)
T 2vat_A 253 YDDPKYLDGEYDVDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQPIEA 332 (444)
T ss_dssp HHSTTSGGGTCCTTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------------CGGG
T ss_pred hcCCccccccccccCCcccchhHHHhhhhccccChHHHHHHhccCccccccccccccccccccccccccccccccCchhh
Confidence 00000 0
Q ss_pred --------------c------------------------chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCc
Q 025121 178 --------------G------------------------SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGF 219 (257)
Q Consensus 178 --------------~------------------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~ 219 (257)
. ........+++|+|+++|++|.++|.+.++.+.+.++
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~~p~~~~~~l~~~~p---- 408 (444)
T 2vat_A 333 VSSYLRYQAQKFAASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMGRSIP---- 408 (444)
T ss_dssp HHHHHHHHHHHHHHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHHHHST----
T ss_pred HHHHHHHHHHHHhhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHHCC----
Confidence 0 0111234578999999999999999999999999887
Q ss_pred eeeEEEEec-CCCCccCHHHHHHHHHHHHHhcC
Q 025121 220 RHLTFKSFE-GLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 220 ~~~~~~~~~-g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
++++++++ ++||..+.+..+.+.+.|.+++.
T Consensus 409 -~~~~~~i~~~~GH~~~~e~p~~~~~~i~~fL~ 440 (444)
T 2vat_A 409 -NSRLCVVDTNEGHDFFVMEADKVNDAVRGFLD 440 (444)
T ss_dssp -TEEEEECCCSCGGGHHHHTHHHHHHHHHHHHT
T ss_pred -CcEEEEeCCCCCcchHHhCHHHHHHHHHHHHH
Confidence 67999999 89999886665555555555543
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.3e-22 Score=159.50 Aligned_cols=196 Identities=15% Similarity=0.054 Sum_probs=132.3
Q ss_pred CCCceEEEEEccCC---CCccchHHHhhcCCC-CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025121 31 GKHQATIVWLHGLG---DNGSSWSQLLESLPL-PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 31 ~~~~~~vi~~HG~~---~~~~~~~~~~~~l~~-~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
..+.|+||++||.+ ++...|..++..|+. .||.|+++|+|++|... .+....++.+.+
T Consensus 76 ~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~G~~Vv~~d~rg~~~~~------------------~~~~~~d~~~~~ 137 (323)
T 1lzl_A 76 AGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETT------------------FPGPVNDCYAAL 137 (323)
T ss_dssp CSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTSC------------------TTHHHHHHHHHH
T ss_pred CCCCcEEEEECCCccccCChhhhHHHHHHHHHhcCcEEEEecCCCCCCCC------------------CCchHHHHHHHH
Confidence 45678999999988 788888888888875 49999999999765321 111233444445
Q ss_pred HHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhh-----------
Q 025121 107 AHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN----------- 174 (257)
Q Consensus 107 ~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----------- 174 (257)
+++.+.+... ...++++|+|||+||.+++.++.+.+.. ....++++++++|++........
T Consensus 138 ~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~-------~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~ 210 (323)
T 1lzl_A 138 LYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDE-------GVVPVAFQFLEIPELDDRLETVSMTNFVDTPLWH 210 (323)
T ss_dssp HHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHH-------CSSCCCEEEEESCCCCTTCCSHHHHHCSSCSSCC
T ss_pred HHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhc-------CCCCeeEEEEECCccCCCcCchhHHHhccCCCCC
Confidence 5554443322 2235999999999999999998854110 02358999999887643211000
Q ss_pred ---------cc-c----------c----chHHH-hhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecC
Q 025121 175 ---------KI-E----------G----SHEAA-RRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEG 229 (257)
Q Consensus 175 ---------~~-~----------~----~~~~~-~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g 229 (257)
.+ . . .+... .....+|+++++|+.|.++ +.+..+++++++.++ ++++++++|
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~P~li~~G~~D~~~--~~~~~~~~~l~~~g~-~~~~~~~~g 287 (323)
T 1lzl_A 211 RPNAILSWKYYLGESYSGPEDPDVSIYAAPSRATDLTGLPPTYLSTMELDPLR--DEGIEYALRLLQAGV-SVELHSFPG 287 (323)
T ss_dssp HHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGGCSCCTTCCCEEEEEETTCTTH--HHHHHHHHHHHHTTC-CEEEEEETT
T ss_pred HHHHHHHHHHhCCCCcccccccCCCcccCcccCcccCCCChhheEECCcCCch--HHHHHHHHHHHHcCC-CEEEEEeCc
Confidence 00 0 0 00000 0111269999999999987 467889999998887 799999999
Q ss_pred CCCccC--------HHHHHHHHHHHHHhcCcCC
Q 025121 230 LGHYTV--------PKEMDEVCNWLTARLGLEG 254 (257)
Q Consensus 230 ~~H~~~--------~~~~~~~~~~l~~~l~~~~ 254 (257)
++|.+. .+..+.+.+||++.+....
T Consensus 288 ~~H~~~~~~~~~~~~~~~~~i~~fl~~~l~~~~ 320 (323)
T 1lzl_A 288 TFHGSALVATAAVSERGAAEALTAIRRGLRSLS 320 (323)
T ss_dssp CCTTGGGSTTSHHHHHHHHHHHHHHHHHTCC--
T ss_pred CccCcccCccCHHHHHHHHHHHHHHHHHhccCC
Confidence 999753 2457889999999886543
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.89 E-value=9.8e-24 Score=165.91 Aligned_cols=184 Identities=14% Similarity=0.055 Sum_probs=124.8
Q ss_pred CCCCceEEEEEccCC---CCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025121 30 KGKHQATIVWLHGLG---DNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 30 ~~~~~~~vi~~HG~~---~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
...+.|+|||+||.+ ++...|..+++.|+..||.|+++|+++++... ......++.+.+
T Consensus 78 ~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~r~~~~~~------------------~~~~~~d~~~~~ 139 (303)
T 4e15_A 78 TTNQAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVT------------------LEQLMTQFTHFL 139 (303)
T ss_dssp CCTTCCEEEEECCSTTTSCCGGGSCTTHHHHHHTTCEEEEECCCCTTTSC------------------HHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcCcCCChhHHHHHHHHHHhCCCEEEEecCCCCCCCC------------------hhHHHHHHHHHH
Confidence 345789999999943 55566767778787789999999988543210 011123334444
Q ss_pred HHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcc--cccceEEEeccCCCCchhhh---hc----cc
Q 025121 107 AHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYY--VNLRAVVGLSGWLPGSRNLR---NK----IE 177 (257)
Q Consensus 107 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~---~~----~~ 177 (257)
.++.+...... .++++|+|||+||++++.++.+.... ..+ .+++++++++|++....... .. +.
T Consensus 140 ~~l~~~~~~~~-~~~i~l~G~S~GG~la~~~a~~~~~~------~~p~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 212 (303)
T 4e15_A 140 NWIFDYTEMTK-VSSLTFAGHXAGAHLLAQILMRPNVI------TAQRSKMVWALIFLCGVYDLRELSNLESVNPKNILG 212 (303)
T ss_dssp HHHHHHHHHTT-CSCEEEEEETHHHHHHGGGGGCTTTS------CHHHHHTEEEEEEESCCCCCHHHHTCTTTSGGGTTC
T ss_pred HHHHHHhhhcC-CCeEEEEeecHHHHHHHHHHhccccc------cCcccccccEEEEEeeeeccHhhhcccccchhhhhc
Confidence 44444333333 45999999999999999998753100 011 38999999999866543222 10 00
Q ss_pred --------cchH-HHhh----hcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHH
Q 025121 178 --------GSHE-AARR----AASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEM 239 (257)
Q Consensus 178 --------~~~~-~~~~----~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~ 239 (257)
..+. .... ...+|++++||++|.+++.+.++.+++.+++.+. ++++++++|++|+...+.+
T Consensus 213 ~~~~~~~~~sp~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~-~~~~~~~~g~~H~~~~~~~ 286 (303)
T 4e15_A 213 LNERNIESVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTFIEQSRHYADVLRKKGY-KASFTLFKGYDHFDIIEET 286 (303)
T ss_dssp CCTTTTTTTCGGGCCCCCGGGGTTSEEEEEEEEESCHHHHHHHHHHHHHHHHHTC-CEEEEEEEEEETTHHHHGG
T ss_pred CCHHHHHHcCchhhcccccccCCCCCEEEEEeCCCCCCchHHHHHHHHHHHHCCC-ceEEEEeCCCCchHHHHHH
Confidence 0000 0111 2388999999999999999999999999998887 7899999999997665543
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=99.89 E-value=6e-22 Score=156.77 Aligned_cols=182 Identities=15% Similarity=0.134 Sum_probs=125.5
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
+.|+|||+||++++...|..++..|+. .++|+++|+||+|.+.... ....++.+.++++..+
T Consensus 42 ~~~~vvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~GhG~S~~~~-----------------~~~~~~~~~a~dl~~l 103 (318)
T 2psd_A 42 AENAVIFLHGNATSSYLWRHVVPHIEP-VARCIIPDLIGMGKSGKSG-----------------NGSYRLLDHYKYLTAW 103 (318)
T ss_dssp TTSEEEEECCTTCCGGGGTTTGGGTTT-TSEEEEECCTTSTTCCCCT-----------------TSCCSHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCcHHHHHHHHHHhhh-cCeEEEEeCCCCCCCCCCC-----------------CCccCHHHHHHHHHHH
Confidence 346899999999999999999999974 5799999999887543210 1123456677788888
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc-------h---h---h-------
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS-------R---N---L------- 172 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~---~---~------- 172 (257)
++......+++|+||||||.+++.+|.+. |++++++|++++..... . . +
T Consensus 104 l~~l~~~~~~~lvGhSmGg~ia~~~A~~~-----------P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (318)
T 2psd_A 104 FELLNLPKKIIFVGHDWGAALAFHYAYEH-----------QDRIKAIVHMESVVDVIESWDEWPDIEEDIALIKSEEGEK 172 (318)
T ss_dssp HTTSCCCSSEEEEEEEHHHHHHHHHHHHC-----------TTSEEEEEEEEECCSCBSCCTTSCSCHHHHHHHHSTHHHH
T ss_pred HHhcCCCCCeEEEEEChhHHHHHHHHHhC-----------hHhhheEEEeccccCCccchhhhhhHHHHHHHHhcccchh
Confidence 87765524999999999999999999964 88999999875421100 0 0 0
Q ss_pred ---------h--------hc------------cccc---------------------h---------HHHhhhc-CCCEE
Q 025121 173 ---------R--------NK------------IEGS---------------------H---------EAARRAA-SLPIL 192 (257)
Q Consensus 173 ---------~--------~~------------~~~~---------------------~---------~~~~~~~-~~P~l 192 (257)
. .. .... . ......+ ++|+|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~L 252 (318)
T 2psd_A 173 MVLENNFFVETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYLRASDDLPKL 252 (318)
T ss_dssp HHTTTCHHHHTHHHHTCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHHHHHHHHHHHTCTTSCEE
T ss_pred hhhcchHHHHhhccccccccCCHHHHHHHHHhhcCccccccchhcccccccccccccchhHHHHHHHHHHhccccCCCeE
Confidence 0 00 0000 0 0011235 89999
Q ss_pred EEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHH----HHHHHHHHHHhcC
Q 025121 193 LTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKE----MDEVCNWLTARLG 251 (257)
Q Consensus 193 ~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~----~~~~~~~l~~~l~ 251 (257)
+++|++| +++. .++.+.+.++ +.+++++ ++||.++.+. .+.+.+||.+...
T Consensus 253 vi~G~~D-~~~~-~~~~~~~~~~-----~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl~~~~~ 307 (318)
T 2psd_A 253 FIESDPG-FFSN-AIVEGAKKFP-----NTEFVKV-KGLHFLQEDAPDEMGKYIKSFVERVLK 307 (318)
T ss_dssp EEEEEEC-SSHH-HHHHHHTTSS-----SEEEEEE-EESSSGGGTCHHHHHHHHHHHHHHHHC
T ss_pred EEEeccc-cCcH-HHHHHHHhCC-----CcEEEEe-cCCCCCHhhCHHHHHHHHHHHHHHhhc
Confidence 9999999 8887 6677776665 5677777 4699887443 4566677765443
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-22 Score=154.45 Aligned_cols=206 Identities=17% Similarity=0.147 Sum_probs=132.4
Q ss_pred CceEEEEEccCCCCccchH----HHhhcCCCCceEEEccCCCCCCcccC-C------------C-CcccccccCCCCCCC
Q 025121 33 HQATIVWLHGLGDNGSSWS----QLLESLPLPNIKWICPTAPTRPVAIL-G------------G-FPCTAWFDVGELSDD 94 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~----~~~~~l~~~g~~v~~~d~~~~g~~~~-~------------g-~~~~~w~~~~~~~~~ 94 (257)
+.|+||++||++++...|. .+.+.|...||.|+++|+|.+..+.. . | .....|+....
T Consensus 4 ~~~~vl~lHG~g~~~~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~~---- 79 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNGKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHSE---- 79 (243)
T ss_dssp CCCEEEEECCTTCCHHHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCCS----
T ss_pred cCceEEEeCCCCccHHHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCCC----
Confidence 4579999999999999876 35566655599999999995432200 0 0 11235654211
Q ss_pred CCCchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhh--
Q 025121 95 GPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL-- 172 (257)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-- 172 (257)
.....++.+.++.+.+.+.... .+++|+||||||.+|+.++.+.+... ...+.++.++.++++.+.....
T Consensus 80 -~~~~~d~~~~~~~l~~~~~~~~--~~i~l~G~S~Gg~~a~~~a~~~~~~~-----~~~~~~~~~v~~~g~~~~~~~~~~ 151 (243)
T 1ycd_A 80 -ISHELDISEGLKSVVDHIKANG--PYDGIVGLSQGAALSSIITNKISELV-----PDHPQFKVSVVISGYSFTEPDPEH 151 (243)
T ss_dssp -SGGGCCCHHHHHHHHHHHHHHC--CCSEEEEETHHHHHHHHHHHHHHHHS-----TTCCCCSEEEEESCCCCEEECTTS
T ss_pred -CcchhhHHHHHHHHHHHHHhcC--CeeEEEEeChHHHHHHHHHHHHhhcc-----cCCCCceEEEEecCCCCCCccccc
Confidence 1123455666666666554321 37999999999999999998531100 0123577788888876432210
Q ss_pred ------hhccccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcC---ceeeEEEEecCCCCccC--HHHHHH
Q 025121 173 ------RNKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISG---FRHLTFKSFEGLGHYTV--PKEMDE 241 (257)
Q Consensus 173 ------~~~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~---~~~~~~~~~~g~~H~~~--~~~~~~ 241 (257)
...+.. .......+++|++++||++|.++|++.++.+++.++..+ . ....++++++||.+. .+..+.
T Consensus 152 ~~~~~~~~~~~~-~~~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~gH~~~~~~~~~~~ 229 (243)
T 1ycd_A 152 PGELRITEKFRD-SFAVKPDMKTKMIFIYGASDQAVPSVRSKYLYDIYLKAQNGNK-EKVLAYEHPGGHMVPNKKDIIRP 229 (243)
T ss_dssp TTCEEECGGGTT-TTCCCTTCCCEEEEEEETTCSSSCHHHHHHHHHHHHHHTTTCT-TTEEEEEESSSSSCCCCHHHHHH
T ss_pred ccccccchhHHH-hccCcccCCCCEEEEEeCCCCccCHHHHHHHHHHhhhhccccc-cccEEEecCCCCcCCchHHHHHH
Confidence 000000 001123478999999999999999999999999987531 0 024455666799875 446789
Q ss_pred HHHHHHHhcCc
Q 025121 242 VCNWLTARLGL 252 (257)
Q Consensus 242 ~~~~l~~~l~~ 252 (257)
+.+||.+.+..
T Consensus 230 i~~fl~~~~~~ 240 (243)
T 1ycd_A 230 IVEQITSSLQE 240 (243)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHhhhh
Confidence 99999987764
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=4.8e-22 Score=160.00 Aligned_cols=193 Identities=16% Similarity=0.108 Sum_probs=131.7
Q ss_pred CceEEEEEccCC---CCcc--chHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025121 33 HQATIVWLHGLG---DNGS--SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 33 ~~~~vi~~HG~~---~~~~--~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
+.|+|||+||.+ ++.. .|..+++.|+..|+.|+++|+|++|.+ .+ ....+....+....++
T Consensus 108 ~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~gg~--~~------------~~~~~~~~~D~~~~~~ 173 (361)
T 1jkm_A 108 VLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTA--EG------------HHPFPSGVEDCLAAVL 173 (361)
T ss_dssp CEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEET--TE------------ECCTTHHHHHHHHHHH
T ss_pred CCeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCCCC--CC------------CCCCCccHHHHHHHHH
Confidence 679999999987 7777 788888888778999999999976411 00 0011122334444455
Q ss_pred HHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCC---------chhhhh----
Q 025121 108 HIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPG---------SRNLRN---- 174 (257)
Q Consensus 108 ~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---------~~~~~~---- 174 (257)
++.+.+.....+ +|+|+|||+||.+++.++.+.... ..++.++++|+++++... ......
T Consensus 174 ~v~~~~~~~~~~-~i~l~G~S~Gg~~a~~~a~~~~~~------~~p~~i~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (361)
T 1jkm_A 174 WVDEHRESLGLS-GVVVQGESGGGNLAIATTLLAKRR------GRLDAIDGVYASIPYISGGYAWDHERRLTELPSLVEN 246 (361)
T ss_dssp HHHHTHHHHTEE-EEEEEEETHHHHHHHHHHHHHHHT------TCGGGCSEEEEESCCCCCCTTSCHHHHHHHCTHHHHT
T ss_pred HHHhhHHhcCCC-eEEEEEECHHHHHHHHHHHHHHhc------CCCcCcceEEEECCccccccccccccccccCcchhhc
Confidence 555554433334 999999999999999999852100 135689999999987655 100000
Q ss_pred ---------------cc----------ccch----HHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEE
Q 025121 175 ---------------KI----------EGSH----EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFK 225 (257)
Q Consensus 175 ---------------~~----------~~~~----~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~ 225 (257)
.+ ...+ ........ |+|+++|++|.+++ .++.+++.+++.+. +++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~l~-P~Lii~G~~D~~~~--~~~~~~~~l~~~g~-~~~l~ 322 (361)
T 1jkm_A 247 DGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLP-PFVVAVNELDPLRD--EGIAFARRLARAGV-DVAAR 322 (361)
T ss_dssp TTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCC-CEEEEEETTCTTHH--HHHHHHHHHHHTTC-CEEEE
T ss_pred cCcccCHHHHHHHHHHhCCCCCCCCCcccCccccChhhHcCCC-ceEEEEcCcCcchh--hHHHHHHHHHHcCC-CEEEE
Confidence 00 0000 11122333 99999999999988 67889999998887 78999
Q ss_pred EecCCCCccC-----------HHHHHHHHHHHHHhc
Q 025121 226 SFEGLGHYTV-----------PKEMDEVCNWLTARL 250 (257)
Q Consensus 226 ~~~g~~H~~~-----------~~~~~~~~~~l~~~l 250 (257)
+++|++|.+. .+..+.+.+||++..
T Consensus 323 ~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 323 VNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp EETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCccCccccccccccHHHHHHHHHHHHHHHHhh
Confidence 9999999876 344577888887653
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.5e-22 Score=159.23 Aligned_cols=196 Identities=18% Similarity=0.170 Sum_probs=129.9
Q ss_pred CCCCCCceE-EEEEccCC---CCccchHHHhhcCCC-CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhH
Q 025121 28 RPKGKHQAT-IVWLHGLG---DNGSSWSQLLESLPL-PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGL 102 (257)
Q Consensus 28 ~~~~~~~~~-vi~~HG~~---~~~~~~~~~~~~l~~-~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 102 (257)
++...+.++ ||++||.+ ++...|..++..|+. .||.|+++|+|+.+.. .. ...+
T Consensus 73 p~~~~~~~~~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~------------------~~---~~~~ 131 (322)
T 3k6k_A 73 QATDGAGAAHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPEN------------------PF---PAAV 131 (322)
T ss_dssp EECTTCCSCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTCEEEEECCCCTTTS------------------CT---THHH
T ss_pred cCCCCCCCeEEEEEcCCcccCCChHHHHHHHHHHHHhcCCEEEEeeCCCCCCC------------------CC---chHH
Confidence 333344555 99999966 677778888888874 4999999998753211 01 2233
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc---c--
Q 025121 103 DASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI---E-- 177 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~-- 177 (257)
.+....+..+.+......+|+|+|+|+||.+++.++.+.+.. ....++++++++|++.......... .
T Consensus 132 ~d~~~a~~~l~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~-------~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~ 204 (322)
T 3k6k_A 132 DDCVAAYRALLKTAGSADRIIIAGDSAGGGLTTASMLKAKED-------GLPMPAGLVMLSPFVDLTLSRWSNSNLADRD 204 (322)
T ss_dssp HHHHHHHHHHHHHHSSGGGEEEEEETHHHHHHHHHHHHHHHT-------TCCCCSEEEEESCCCCTTCCSHHHHHTGGGC
T ss_pred HHHHHHHHHHHHcCCCCccEEEEecCccHHHHHHHHHHHHhc-------CCCCceEEEEecCCcCcccCccchhhccCCC
Confidence 344444433333323445999999999999999999864211 0223899999999865432110000 0
Q ss_pred -------------------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCC
Q 025121 178 -------------------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGH 232 (257)
Q Consensus 178 -------------------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H 232 (257)
..+.........|+|+++|++|.++ +.+..++++++++++ ++++++++|++|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~G~~D~~~--~~~~~~~~~l~~~g~-~~~l~~~~g~~H 281 (322)
T 3k6k_A 205 FLAEPDTLGEMSELYVGGEDRKNPLISPVYADLSGLPEMLIHVGSEEALL--SDSTTLAERAGAAGV-SVELKIWPDMPH 281 (322)
T ss_dssp SSSCHHHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEESSCTTH--HHHHHHHHHHHHTTC-CEEEEEETTCCT
T ss_pred CcCCHHHHHHHHHHhcCCCCCCCCcCCcccccccCCCcEEEEECCcCccH--HHHHHHHHHHHHCCC-CEEEEEECCCcc
Confidence 0000011122369999999999884 578889999999887 899999999999
Q ss_pred ccC---------HHHHHHHHHHHHHhcCcCC
Q 025121 233 YTV---------PKEMDEVCNWLTARLGLEG 254 (257)
Q Consensus 233 ~~~---------~~~~~~~~~~l~~~l~~~~ 254 (257)
.+. .+..+.+.+||.+.+....
T Consensus 282 ~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~~ 312 (322)
T 3k6k_A 282 VFQMYGKFVNAADISIKEICHWISARISKLA 312 (322)
T ss_dssp TGGGGTTTCHHHHHHHHHHHHHHHTTCC---
T ss_pred ccccccccChHHHHHHHHHHHHHHHHHhccc
Confidence 864 2467889999999887653
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.88 E-value=6.7e-22 Score=159.73 Aligned_cols=196 Identities=14% Similarity=0.047 Sum_probs=127.5
Q ss_pred ceEEEEEccCCCCccc---------hHHHhh---cCCCCceEEEccCCCC-CCcccCCCCcccccccCCCCCCCCCCchh
Q 025121 34 QATIVWLHGLGDNGSS---------WSQLLE---SLPLPNIKWICPTAPT-RPVAILGGFPCTAWFDVGELSDDGPEDWE 100 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~---------~~~~~~---~l~~~g~~v~~~d~~~-~g~~~~~g~~~~~w~~~~~~~~~~~~~~~ 100 (257)
.|+|||+||++++... |..++. .|+..||.|+++|+|| +|.+......... .+..........
T Consensus 59 ~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~~~~~----~g~~~~~~~~~~ 134 (377)
T 2b61_A 59 NNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQ----TGKPYGSQFPNI 134 (377)
T ss_dssp CCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCTT----TSSBCGGGCCCC
T ss_pred CCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCcccCcc----ccccccccCCcc
Confidence 5899999999999998 888885 4756899999999998 3432211000000 000000000023
Q ss_pred hHHHHHHHHHHHhccCCCCceEE-EEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh--------
Q 025121 101 GLDASAAHIANLLSTEPADVKVG-IGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN-------- 171 (257)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~i~-l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------- 171 (257)
++.+.++++..+++..... +++ |+||||||.+++.++.+. |++++++|++++.......
T Consensus 135 ~~~~~~~~l~~~l~~l~~~-~~~~lvGhS~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~ 202 (377)
T 2b61_A 135 VVQDIVKVQKALLEHLGIS-HLKAIIGGSFGGMQANQWAIDY-----------PDFMDNIVNLCSSIYFSAEAIGFNHVM 202 (377)
T ss_dssp CHHHHHHHHHHHHHHTTCC-CEEEEEEETHHHHHHHHHHHHS-----------TTSEEEEEEESCCSSCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcCCc-ceeEEEEEChhHHHHHHHHHHC-----------chhhheeEEeccCccccccchhHHHHH
Confidence 5566677777777665444 777 999999999999999964 8899999999875322100
Q ss_pred ---hh--------------------------------------hcc-----------------------------cc---
Q 025121 172 ---LR--------------------------------------NKI-----------------------------EG--- 178 (257)
Q Consensus 172 ---~~--------------------------------------~~~-----------------------------~~--- 178 (257)
+. ..+ ..
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (377)
T 2b61_A 203 RQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLERFDA 282 (377)
T ss_dssp HHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTTCCH
T ss_pred HHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccccchHHHHHHHHhhhhhhccccCh
Confidence 00 000 00
Q ss_pred --------------------chHHHhhhcCCCEEEEccCCCCcccc----hhhHHHHHHhhhcCceeeEEEEec-CCCCc
Q 025121 179 --------------------SHEAARRAASLPILLTHGLCDDVVPY----KYGEKSANCLSISGFRHLTFKSFE-GLGHY 233 (257)
Q Consensus 179 --------------------~~~~~~~~~~~P~l~~~G~~D~~v~~----~~~~~~~~~l~~~~~~~~~~~~~~-g~~H~ 233 (257)
........+++|+++++|++|.++|+ +.++.+.+.++ ++++++++ ++||.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~l~~~~~-----~~~~~~i~~~~gH~ 357 (377)
T 2b61_A 283 NSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGV-----DLHFYEFPSDYGHD 357 (377)
T ss_dssp HHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTC-----EEEEEEECCTTGGG
T ss_pred hHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHHHHHHHHhcCC-----CceEEEeCCCCCch
Confidence 00122345679999999999999999 55555555554 78999999 99999
Q ss_pred cCHHHHHHHHHHHHHhc
Q 025121 234 TVPKEMDEVCNWLTARL 250 (257)
Q Consensus 234 ~~~~~~~~~~~~l~~~l 250 (257)
+..+..+.+.+.|.+++
T Consensus 358 ~~~e~p~~~~~~i~~fl 374 (377)
T 2b61_A 358 AFLVDYDQFEKRIRDGL 374 (377)
T ss_dssp HHHHCHHHHHHHHHHHH
T ss_pred hhhcCHHHHHHHHHHHH
Confidence 87655555555554444
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.5e-22 Score=174.19 Aligned_cols=198 Identities=16% Similarity=0.140 Sum_probs=137.8
Q ss_pred CCceEEEEEccCCCCc---cchH-----HHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHH
Q 025121 32 KHQATIVWLHGLGDNG---SSWS-----QLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLD 103 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~---~~~~-----~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 103 (257)
++.|+||++||.+++. ..|. .+++.|+..||.|+++|+|++|.+.. .|... .. .......+.
T Consensus 515 ~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~s~~------~~~~~-~~---~~~~~~~~~ 584 (741)
T 2ecf_A 515 KRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRRGR------DFGGA-LY---GKQGTVEVA 584 (741)
T ss_dssp SCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECCTTCSSSCH------HHHHT-TT---TCTTTHHHH
T ss_pred CCcCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEecCCCCCCCh------hhhHH-Hh---hhcccccHH
Confidence 4578999999988764 3454 57788877899999999998764211 11100 00 001112334
Q ss_pred HHHHHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh---hhhc----
Q 025121 104 ASAAHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN---LRNK---- 175 (257)
Q Consensus 104 ~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~~~---- 175 (257)
+....+..+.+.. ....+++|+||||||.+++.++.+. |+++++++++++....... +...
T Consensus 585 d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~-----------p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 653 (741)
T 2ecf_A 585 DQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKA-----------SDSYACGVAGAPVTDWGLYDSHYTERYMDL 653 (741)
T ss_dssp HHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHC-----------TTTCSEEEEESCCCCGGGSBHHHHHHHHCC
T ss_pred HHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhC-----------CCceEEEEEcCCCcchhhhccccchhhcCC
Confidence 4444444444332 2235999999999999999999854 7899999999886542210 0000
Q ss_pred -------c-ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCH----HHHHHHH
Q 025121 176 -------I-EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVP----KEMDEVC 243 (257)
Q Consensus 176 -------~-~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~----~~~~~~~ 243 (257)
+ ...+......+++|+|+++|++|..++++.++.+++.++..+. +++++++++++|.+.. +..+.+.
T Consensus 654 ~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~-~~~~~~~~~~~H~~~~~~~~~~~~~i~ 732 (741)
T 2ecf_A 654 PARNDAGYREARVLTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQKRGQ-PFELMTYPGAKHGLSGADALHRYRVAE 732 (741)
T ss_dssp TGGGHHHHHHHCSGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHHHTTC-CCEEEEETTCCSSCCHHHHHHHHHHHH
T ss_pred cccChhhhhhcCHHHHHhhCCCCEEEEccCCCCCCCHHHHHHHHHHHHHCCC-ceEEEEECCCCCCCCCCchhHHHHHHH
Confidence 0 0011123456789999999999999999999999999998876 7899999999999873 3568889
Q ss_pred HHHHHhcC
Q 025121 244 NWLTARLG 251 (257)
Q Consensus 244 ~~l~~~l~ 251 (257)
+||.+.++
T Consensus 733 ~fl~~~l~ 740 (741)
T 2ecf_A 733 AFLGRCLK 740 (741)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhcC
Confidence 99988775
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.88 E-value=4.4e-22 Score=156.92 Aligned_cols=192 Identities=15% Similarity=0.114 Sum_probs=129.1
Q ss_pred CCCceEEEEEcc---CCCCccchHHHhhcCCCC-ceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025121 31 GKHQATIVWLHG---LGDNGSSWSQLLESLPLP-NIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 31 ~~~~~~vi~~HG---~~~~~~~~~~~~~~l~~~-g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
..+.|+||++|| ++++...|..+++.|+.. |+.|+++|+|++|... .+....++.+.+
T Consensus 71 ~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~~~~~------------------~~~~~~d~~~~~ 132 (310)
T 2hm7_A 71 EPPYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHK------------------FPAAVEDAYDAL 132 (310)
T ss_dssp CSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSC------------------TTHHHHHHHHHH
T ss_pred CCCCCEEEEECCCccccCChhHhHHHHHHHHHhcCCEEEEeCCCCCCCCC------------------CCccHHHHHHHH
Confidence 456799999999 778888899999998764 9999999988654211 111233344444
Q ss_pred HHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc--h---hhhh------
Q 025121 107 AHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--R---NLRN------ 174 (257)
Q Consensus 107 ~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~---~~~~------ 174 (257)
+++.+..... ...++++|+|||+||.+++.++.+.+.. ....++++++++++.... . ....
T Consensus 133 ~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~-------~~~~v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~ 205 (310)
T 2hm7_A 133 QWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKER-------GGPALAFQLLIYPSTGYDPAHPPASIEENAEGYL 205 (310)
T ss_dssp HHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHT-------TCCCCCCEEEESCCCCCCTTSCCHHHHHTSSSSS
T ss_pred HHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhc-------CCCCceEEEEEcCCcCCCcccCCcchhhcCCCCC
Confidence 4444443322 1235999999999999999999864210 023689999998876443 0 0000
Q ss_pred -----------cc-cc---------chHHHhh-hcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCC
Q 025121 175 -----------KI-EG---------SHEAARR-AASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGH 232 (257)
Q Consensus 175 -----------~~-~~---------~~~~~~~-~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H 232 (257)
.+ .. .+..... ..-.|+++++|++|.++ +.+..+.+++++.+. ++++++++|++|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~P~lii~G~~D~~~--~~~~~~~~~l~~~g~-~~~~~~~~g~~H 282 (310)
T 2hm7_A 206 LTGGMMLWFRDQYLNSLEELTHPWFSPVLYPDLSGLPPAYIATAQYDPLR--DVGKLYAEALNKAGV-KVEIENFEDLIH 282 (310)
T ss_dssp SCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCCTTCCCEEEEEEEECTTH--HHHHHHHHHHHHTTC-CEEEEEEEEEET
T ss_pred CCHHHHHHHHHHhCCCCCccCCccCCCCcCccccCCCCEEEEEecCCCch--HHHHHHHHHHHHCCC-CEEEEEeCCCcc
Confidence 00 00 0000001 11239999999999987 567889999998876 789999999999
Q ss_pred ccC---------HHHHHHHHHHHHHhc
Q 025121 233 YTV---------PKEMDEVCNWLTARL 250 (257)
Q Consensus 233 ~~~---------~~~~~~~~~~l~~~l 250 (257)
.+. .+..+.+.+||.+.+
T Consensus 283 ~~~~~~~~~~~~~~~~~~i~~fl~~~l 309 (310)
T 2hm7_A 283 GFAQFYSLSPGATKALVRIAEKLRDAL 309 (310)
T ss_dssp TGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred chhhhcccChHHHHHHHHHHHHHHHHh
Confidence 664 345678889998765
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.3e-21 Score=153.62 Aligned_cols=194 Identities=17% Similarity=0.059 Sum_probs=131.6
Q ss_pred EeCCCCCCceEEEEEccC---CCCccchHHHhhcCCC-CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhh
Q 025121 26 VVRPKGKHQATIVWLHGL---GDNGSSWSQLLESLPL-PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEG 101 (257)
Q Consensus 26 ~~~~~~~~~~~vi~~HG~---~~~~~~~~~~~~~l~~-~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 101 (257)
+.+....+.|+|||+||. .++...|..+++.|+. .||.|+++|+|++|... .+....+
T Consensus 82 y~P~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~La~~~g~~Vv~~Dyrg~~~~~------------------~p~~~~d 143 (323)
T 3ain_A 82 YYPKTQGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENK------------------FPAAVVD 143 (323)
T ss_dssp EECSSCSCCCEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSC------------------TTHHHHH
T ss_pred EecCCCCCCcEEEEECCCccccCChHHHHHHHHHHHHhcCCEEEEecCCCCCCCC------------------CcchHHH
Confidence 334444567899999994 4788889999999874 49999999998654311 1112334
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCccccc---ceEEEeccCCCCchhhh-----
Q 025121 102 LDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNL---RAVVGLSGWLPGSRNLR----- 173 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~----- 173 (257)
..+.++++.+........++++|+|+|+||.+++.++.+. +++. +++++++|++.......
T Consensus 144 ~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~-----------~~~~~~~~~~vl~~p~~~~~~~~~~~~~~ 212 (323)
T 3ain_A 144 SFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILS-----------KKENIKLKYQVLIYPAVSFDLITKSLYDN 212 (323)
T ss_dssp HHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHH-----------HHTTCCCSEEEEESCCCSCCSCCHHHHHH
T ss_pred HHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHh-----------hhcCCCceeEEEEeccccCCCCCccHHHh
Confidence 4444555544443332345999999999999999999864 4333 78888888754321100
Q ss_pred ---------------hcc-cc---------chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEec
Q 025121 174 ---------------NKI-EG---------SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFE 228 (257)
Q Consensus 174 ---------------~~~-~~---------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~ 228 (257)
..+ .. .+.......-.|+++++|+.|.++ +.+..+++++++.++ ++++++++
T Consensus 213 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~l~P~lii~G~~D~l~--~~~~~~a~~l~~ag~-~~~~~~~~ 289 (323)
T 3ain_A 213 GEGFFLTREHIDWFGQQYLRSFADLLDFRFSPILADLNDLPPALIITAEHDPLR--DQGEAYANKLLQSGV-QVTSVGFN 289 (323)
T ss_dssp SSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGSCCTTCCCEEEEEETTCTTH--HHHHHHHHHHHHTTC-CEEEEEET
T ss_pred ccCCCCCHHHHHHHHHHhCCCCcccCCcccCcccCcccCCCHHHEEECCCCccH--HHHHHHHHHHHHcCC-CEEEEEEC
Confidence 000 00 000000111249999999999987 467889999998887 79999999
Q ss_pred CCCCccCH---------HHHHHHHHHHHHhcC
Q 025121 229 GLGHYTVP---------KEMDEVCNWLTARLG 251 (257)
Q Consensus 229 g~~H~~~~---------~~~~~~~~~l~~~l~ 251 (257)
|++|.+.. +..+.+.+||++.+.
T Consensus 290 g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 321 (323)
T 3ain_A 290 NVIHGFVSFFPFIEQGRDAIGLIGYVLRKVFY 321 (323)
T ss_dssp TCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCccccccccCcCHHHHHHHHHHHHHHHHHhc
Confidence 99998763 456888899988764
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=6.5e-22 Score=172.35 Aligned_cols=197 Identities=12% Similarity=0.076 Sum_probs=133.0
Q ss_pred CCceEEEEEccCCCCc---cchHH----HhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025121 32 KHQATIVWLHGLGDNG---SSWSQ----LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~---~~~~~----~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
++.|+||++||.+... ..|.. ++..|+..||.|+++|+||+|.+.. .|... .. .......+.+
T Consensus 483 ~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~rG~g~s~~------~~~~~-~~---~~~~~~~~~D 552 (706)
T 2z3z_A 483 KKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSRGSANRGA------AFEQV-IH---RRLGQTEMAD 552 (706)
T ss_dssp SCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECCTTCSSSCH------HHHHT-TT---TCTTHHHHHH
T ss_pred CCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEecCCCcccch------hHHHH-Hh---hccCCccHHH
Confidence 4568999999976655 34554 5777777899999999998754221 11000 00 0111223344
Q ss_pred HHHHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh---hhhcc----
Q 025121 105 SAAHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN---LRNKI---- 176 (257)
Q Consensus 105 ~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~~~~---- 176 (257)
....+..+.+.. ...++++|+||||||++++.++.+. |++++++++++|....... +...+
T Consensus 553 ~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-----------p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 621 (706)
T 2z3z_A 553 QMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTH-----------GDVFKVGVAGGPVIDWNRYAIMYGERYFDAP 621 (706)
T ss_dssp HHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHS-----------TTTEEEEEEESCCCCGGGSBHHHHHHHHCCT
T ss_pred HHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhC-----------CCcEEEEEEcCCccchHHHHhhhhhhhcCCc
Confidence 444444333222 1235899999999999999999954 8899999999886542210 00000
Q ss_pred --------ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC----HHHHHHHHH
Q 025121 177 --------EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV----PKEMDEVCN 244 (257)
Q Consensus 177 --------~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~----~~~~~~~~~ 244 (257)
..........+++|+|+++|++|.++|++.++++++.++..+. +++++++|+++|.+. .+..+.+.+
T Consensus 622 ~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 700 (706)
T 2z3z_A 622 QENPEGYDAANLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVKART-YPDYYVYPSHEHNVMGPDRVHLYETITR 700 (706)
T ss_dssp TTCHHHHHHHCGGGGGGGCCSEEEEEEETTCSSSCTHHHHHHHHHHHHHTC-CCEEEEETTCCSSCCTTHHHHHHHHHHH
T ss_pred ccChhhhhhCCHhHhHHhCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHCCC-CeEEEEeCCCCCCCCcccHHHHHHHHHH
Confidence 0011223456789999999999999999999999999998776 789999999999987 334677888
Q ss_pred HHHHhc
Q 025121 245 WLTARL 250 (257)
Q Consensus 245 ~l~~~l 250 (257)
||.+.|
T Consensus 701 fl~~~l 706 (706)
T 2z3z_A 701 YFTDHL 706 (706)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 887654
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-21 Score=151.11 Aligned_cols=183 Identities=13% Similarity=0.226 Sum_probs=125.0
Q ss_pred CCCceEEEEEccCCCCccchHH-------HhhcCCC----CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCch
Q 025121 31 GKHQATIVWLHGLGDNGSSWSQ-------LLESLPL----PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDW 99 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~~-------~~~~l~~----~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~ 99 (257)
+++.|+||++||.+++...|.. +++.|.. .++.|+.+|.++++.+. ....
T Consensus 59 ~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~~~~~-------------------~~~~ 119 (268)
T 1jjf_A 59 DKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGI-------------------ADGY 119 (268)
T ss_dssp TSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTTC-------------------SCHH
T ss_pred CCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCCCccc-------------------cccH
Confidence 3567999999999988766543 3555543 36999999987543210 0011
Q ss_pred hhH-HHHHHHHHHHhccC-C---CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhh
Q 025121 100 EGL-DASAAHIANLLSTE-P---ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN 174 (257)
Q Consensus 100 ~~~-~~~~~~~~~~~~~~-~---~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 174 (257)
..+ .+.+..+.+++++. . +.++++|+|||+||.+++.++.+. ++.++++++++|....... ..
T Consensus 120 ~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-----------p~~~~~~v~~s~~~~~~~~-~~ 187 (268)
T 1jjf_A 120 ENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTN-----------LDKFAYIGPISAAPNTYPN-ER 187 (268)
T ss_dssp HHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTC-----------TTTCSEEEEESCCTTSCCH-HH
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhC-----------chhhhheEEeCCCCCCCch-hh
Confidence 111 22244444444432 1 336999999999999999999854 7889999999986543211 11
Q ss_pred ccccchHHHhhhcCCC-EEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC--HHHHHHHHHHHHHh
Q 025121 175 KIEGSHEAARRAASLP-ILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV--PKEMDEVCNWLTAR 249 (257)
Q Consensus 175 ~~~~~~~~~~~~~~~P-~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~~~ 249 (257)
.+.... .......| ++++||++|.+++. ++.+.+.+++.+. ++++++++|++|.+. .+.+..+++||.+.
T Consensus 188 ~~~~~~--~~~~~~~pp~li~~G~~D~~v~~--~~~~~~~l~~~g~-~~~~~~~~g~~H~~~~~~~~~~~~~~~l~~~ 260 (268)
T 1jjf_A 188 LFPDGG--KAAREKLKLLFIACGTNDSLIGF--GQRVHEYCVANNI-NHVYWLIQGGGHDFNVWKPGLWNFLQMADEA 260 (268)
T ss_dssp HCTTTT--HHHHHHCSEEEEEEETTCTTHHH--HHHHHHHHHHTTC-CCEEEEETTCCSSHHHHHHHHHHHHHHHHHH
T ss_pred hcCcch--hhhhhcCceEEEEecCCCCCccH--HHHHHHHHHHCCC-ceEEEEcCCCCcCHhHHHHHHHHHHHHHHhc
Confidence 111110 11223445 99999999999885 6789999998887 789999999999874 56678899999875
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.7e-21 Score=170.12 Aligned_cols=210 Identities=9% Similarity=0.027 Sum_probs=137.8
Q ss_pred CCCceEEeCCC---CCCceEEEEEccCCCCc---cchH--HHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCC
Q 025121 20 EFGRTHVVRPK---GKHQATIVWLHGLGDNG---SSWS--QLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGEL 91 (257)
Q Consensus 20 ~~~~~~~~~~~---~~~~~~vi~~HG~~~~~---~~~~--~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~ 91 (257)
.+...++.++. +++.|+||++||.+++. ..|. .....|+..||.|+++|+||+|... ..|... ..
T Consensus 479 ~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~~d~rG~g~~g------~~~~~~-~~ 551 (723)
T 1xfd_A 479 NLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQG------TKLLHE-VR 551 (723)
T ss_dssp EECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSH------HHHHHT-TT
T ss_pred eEEEEEEeCCCCCCCCccCEEEEEcCCCCccccCccccccHHHHHhhcCCEEEEEECCCCCcccc------HHHHHH-HH
Confidence 34444444443 35679999999988763 2332 4555666689999999999765311 011000 00
Q ss_pred CCCCCCchhhHHHHHHHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCc----ccccceEEEeccCC
Q 025121 92 SDDGPEDWEGLDASAAHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPY----YVNLRAVVGLSGWL 166 (257)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~ 166 (257)
.......+.+....+..+.+.. ...++++|+||||||++++.++. .+ |+++++++++++..
T Consensus 552 ---~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~-----------~~~~~~p~~~~~~v~~~~~~ 617 (723)
T 1xfd_A 552 ---RRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILP-----------AKGENQGQTFTCGSALSPIT 617 (723)
T ss_dssp ---TCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCC-----------CSSSTTCCCCSEEEEESCCC
T ss_pred ---hccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHH-----------hccccCCCeEEEEEEccCCc
Confidence 0111234455555555544432 22358999999999999999987 34 67899999998854
Q ss_pred CCch---hhhh-----------cc-ccchHHHhhhcC-CCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCC
Q 025121 167 PGSR---NLRN-----------KI-EGSHEAARRAAS-LPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGL 230 (257)
Q Consensus 167 ~~~~---~~~~-----------~~-~~~~~~~~~~~~-~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~ 230 (257)
.... .+.. .+ ..........++ +|+|++||++|..+|++.++++++.++..+. +++++++|++
T Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~-~~~~~~~~~~ 696 (723)
T 1xfd_A 618 DFKLYASAFSERYLGLHGLDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKA-NYSLQIYPDE 696 (723)
T ss_dssp CTTSSBHHHHHHHHCCCSSCCSSTTTTCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTC-CCEEEEETTC
T ss_pred chHHhhhhccHhhcCCccCChhHHHhcChhhHHhhcCCCCEEEEEeCCCCCcCHhHHHHHHHHHHHCCC-CeEEEEECCC
Confidence 3221 0000 00 111223445566 7999999999999999999999999998876 7899999999
Q ss_pred CCcc-CH----HHHHHHHHHHHHhcC
Q 025121 231 GHYT-VP----KEMDEVCNWLTARLG 251 (257)
Q Consensus 231 ~H~~-~~----~~~~~~~~~l~~~l~ 251 (257)
+|.+ .. +..+.+.+||.+.++
T Consensus 697 ~H~~~~~~~~~~~~~~i~~fl~~~l~ 722 (723)
T 1xfd_A 697 SHYFTSSSLKQHLYRSIINFFVECFR 722 (723)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHTTTTC
T ss_pred CcccccCcchHHHHHHHHHHHHHHhc
Confidence 9998 33 345777888877654
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.87 E-value=7.2e-21 Score=154.19 Aligned_cols=185 Identities=21% Similarity=0.222 Sum_probs=128.9
Q ss_pred CCCceEEEEEccCCCCccchH--HHh----hc------CCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCc
Q 025121 31 GKHQATIVWLHGLGDNGSSWS--QLL----ES------LPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPED 98 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~--~~~----~~------l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~ 98 (257)
+++.|+||++||.+++...+. .+. .. ....++.++++|.++.+. + ...|.+. ......
T Consensus 171 ~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g~~~-----~-~~~~~~~----~~~~~~ 240 (380)
T 3doh_A 171 DRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPNSS-----W-STLFTDR----ENPFNP 240 (380)
T ss_dssp TSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCTTCC-----S-BTTTTCS----SCTTSB
T ss_pred CCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCCCCc-----c-ccccccc----ccccCC
Confidence 456799999999986654321 111 11 124678999999885321 1 0122211 111122
Q ss_pred hhhHHHHHHHHHHHhccCCC-CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccc
Q 025121 99 WEGLDASAAHIANLLSTEPA-DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIE 177 (257)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 177 (257)
...+.+....+..+++.... .++++|+||||||.+++.++.+. ++.++++++++|.....
T Consensus 241 ~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~-----------p~~~~~~v~~sg~~~~~-------- 301 (380)
T 3doh_A 241 EKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEF-----------PELFAAAIPICGGGDVS-------- 301 (380)
T ss_dssp CHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHC-----------TTTCSEEEEESCCCCGG--------
T ss_pred cchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhC-----------CccceEEEEecCCCChh--------
Confidence 33445555555555555432 35899999999999999999854 88899999999876221
Q ss_pred cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCC--------CCccCHHHHH--HHHHHHH
Q 025121 178 GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGL--------GHYTVPKEMD--EVCNWLT 247 (257)
Q Consensus 178 ~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~--------~H~~~~~~~~--~~~~~l~ 247 (257)
.......+|+++++|+.|.++|++.++.+++.+++.+. ++++++++++ +|....+.+. .+.+||.
T Consensus 302 ----~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~-~~~~~~~~~~~h~~h~~~~H~~~~~~~~~~~i~~wL~ 376 (380)
T 3doh_A 302 ----KVERIKDIPIWVFHAEDDPVVPVENSRVLVKKLAEIGG-KVRYTEYEKGFMEKHGWDPHGSWIPTYENQEAIEWLF 376 (380)
T ss_dssp ----GGGGGTTSCEEEEEETTCSSSCTHHHHHHHHHHHHTTC-CEEEEEECTTHHHHTTCCTTCTHHHHHTCHHHHHHHH
T ss_pred ----hhhhccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCC-ceEEEEecCCcccCCCCCCchhHHHhcCCHHHHHHHH
Confidence 11223358999999999999999999999999999887 7899999999 7876666666 8999997
Q ss_pred Hh
Q 025121 248 AR 249 (257)
Q Consensus 248 ~~ 249 (257)
+.
T Consensus 377 ~~ 378 (380)
T 3doh_A 377 EQ 378 (380)
T ss_dssp TC
T ss_pred hh
Confidence 64
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.5e-21 Score=155.72 Aligned_cols=186 Identities=12% Similarity=0.045 Sum_probs=121.3
Q ss_pred CCceEEEEEccCCCC---ccc--hHHHhhcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025121 32 KHQATIVWLHGLGDN---GSS--WSQLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~---~~~--~~~~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
.+.|+|||+||.+.. ... |..++..|+ ..|+.|+++|+|+.+.. .. ...+.+.
T Consensus 81 ~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~------------------~~---~~~~~d~ 139 (338)
T 2o7r_A 81 AKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEH------------------RL---PAAYDDA 139 (338)
T ss_dssp CCEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTTTT------------------CT---THHHHHH
T ss_pred CCceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCCCC------------------CC---chHHHHH
Confidence 567899999997733 232 788888887 67999999998864211 00 1223333
Q ss_pred HHHHHHHhccC-------CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCccc--------ccceEEEeccCCCCch
Q 025121 106 AAHIANLLSTE-------PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYV--------NLRAVVGLSGWLPGSR 170 (257)
Q Consensus 106 ~~~~~~~~~~~-------~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~--------~~~~~i~~~~~~~~~~ 170 (257)
...+..+.+.. .+..+++|+|||+||.+++.++.+. ++ +++++|++++++....
T Consensus 140 ~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~-----------~~~~~~~~~~~v~~~vl~~p~~~~~~ 208 (338)
T 2o7r_A 140 MEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRA-----------AAVADELLPLKIKGLVLDEPGFGGSK 208 (338)
T ss_dssp HHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHH-----------HTTHHHHTTCCEEEEEEESCCCCCSS
T ss_pred HHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHh-----------ccccccCCCCceeEEEEECCccCCCc
Confidence 33333333221 1225999999999999999999865 44 7999999988754321
Q ss_pred hhhh-------------------------c-------cccc-------hHHHhhhcCCCEEEEccCCCCcccchhhHHHH
Q 025121 171 NLRN-------------------------K-------IEGS-------HEAARRAASLPILLTHGLCDDVVPYKYGEKSA 211 (257)
Q Consensus 171 ~~~~-------------------------~-------~~~~-------~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~ 211 (257)
.... . .... .........+|+|+++|++|.+++ ...++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~Lvi~G~~D~~~~--~~~~~~ 286 (338)
T 2o7r_A 209 RTGSELRLANDSRLPTFVLDLIWELSLPMGADRDHEYCNPTAESEPLYSFDKIRSLGWRVMVVGCHGDPMID--RQMELA 286 (338)
T ss_dssp CCHHHHHTTTCSSSCHHHHHHHHHHHSCTTCCTTSTTTCCC----CCTHHHHHHHHTCEEEEEEETTSTTHH--HHHHHH
T ss_pred CChhhhccCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCCcccccHhhhcCCCCCEEEEECCCCcchH--HHHHHH
Confidence 1000 0 0000 001122345699999999999987 357788
Q ss_pred HHhhhcCceeeEEEEecCCCCccC-------HHHHHHHHHHHHHhcCc
Q 025121 212 NCLSISGFRHLTFKSFEGLGHYTV-------PKEMDEVCNWLTARLGL 252 (257)
Q Consensus 212 ~~l~~~~~~~~~~~~~~g~~H~~~-------~~~~~~~~~~l~~~l~~ 252 (257)
+.+++.+. ++++++++|++|.+. .+..+.+.+||.+.+..
T Consensus 287 ~~l~~~~~-~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~~~~ 333 (338)
T 2o7r_A 287 ERLEKKGV-DVVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVDSCTT 333 (338)
T ss_dssp HHHHHTTC-EEEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHCCC-cEEEEEECCCceEEeccChHHHHHHHHHHHHHHHhhccc
Confidence 88887776 889999999999774 23467788888776543
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.87 E-value=8.9e-22 Score=172.40 Aligned_cols=212 Identities=10% Similarity=0.053 Sum_probs=139.1
Q ss_pred CCCceEEeCCC---CCCceEEEEEccCCCCc---cchH-HHhhcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCC
Q 025121 20 EFGRTHVVRPK---GKHQATIVWLHGLGDNG---SSWS-QLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGEL 91 (257)
Q Consensus 20 ~~~~~~~~~~~---~~~~~~vi~~HG~~~~~---~~~~-~~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~ 91 (257)
.+...++.++. .++.|+||++||.+++. ..|. .+...++ +.||.|+++|.||+|... ..|... ..
T Consensus 485 ~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~l~~~~G~~Vv~~D~rG~g~~g------~~~~~~-~~ 557 (740)
T 4a5s_A 485 KFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQG------DKIMHA-IN 557 (740)
T ss_dssp EEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSC------HHHHGG-GT
T ss_pred EEEEEEEeCCCCCCCCCccEEEEECCCCcccccccccCcCHHHHHHhcCCeEEEEEcCCCCCcCC------hhHHHH-HH
Confidence 34344444443 45679999999987763 2232 1233333 589999999999765211 111110 00
Q ss_pred CCCCCCchhhHHHHHHHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch
Q 025121 92 SDDGPEDWEGLDASAAHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR 170 (257)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 170 (257)
.......+.+....+..+.+.. .+..+++|+||||||++++.++.+. ++.++++++++|......
T Consensus 558 ---~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~-----------p~~~~~~v~~~p~~~~~~ 623 (740)
T 4a5s_A 558 ---RRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSG-----------SGVFKCGIAVAPVSRWEY 623 (740)
T ss_dssp ---TCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTT-----------CSCCSEEEEESCCCCGGG
T ss_pred ---hhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhC-----------CCceeEEEEcCCccchHH
Confidence 0111123444455554444332 1235999999999999999999853 889999999998654221
Q ss_pred h---hhhcc--------------ccchHHHhhhcCC-CEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCC
Q 025121 171 N---LRNKI--------------EGSHEAARRAASL-PILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGH 232 (257)
Q Consensus 171 ~---~~~~~--------------~~~~~~~~~~~~~-P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H 232 (257)
. +.+.+ ..........++. |+|++||+.|..+|++.+.++++.++..+. +++++++|+++|
T Consensus 624 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~-~~~~~~~~~~~H 702 (740)
T 4a5s_A 624 YDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGV-DFQAMWYTDEDH 702 (740)
T ss_dssp SBHHHHHHHHCCSSTTTTHHHHHHSCSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHTTC-CCEEEEETTCCT
T ss_pred hhhHHHHHHcCCCCccccHHHHHhCCHHHHHhcCCCCcEEEEEcCCCCccCHHHHHHHHHHHHHCCC-CeEEEEECCCCC
Confidence 0 00000 0111122344454 999999999999999999999999999887 889999999999
Q ss_pred ccC-----HHHHHHHHHHHHHhcCcC
Q 025121 233 YTV-----PKEMDEVCNWLTARLGLE 253 (257)
Q Consensus 233 ~~~-----~~~~~~~~~~l~~~l~~~ 253 (257)
.+. .+..+.+.+||.+.++..
T Consensus 703 ~~~~~~~~~~~~~~i~~fl~~~l~~~ 728 (740)
T 4a5s_A 703 GIASSTAHQHIYTHMSHFIKQCFSLP 728 (740)
T ss_dssp TCCSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCCccHHHHHHHHHHHHHHHcCCC
Confidence 983 345688999999988754
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.2e-22 Score=156.99 Aligned_cols=180 Identities=14% Similarity=0.136 Sum_probs=123.8
Q ss_pred CceEEEEEccC--CCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025121 33 HQATIVWLHGL--GDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 33 ~~~~vi~~HG~--~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
.+|+|||+||+ .++...|..+++.|+ .+|+|+++|+||+|.+... .....++.+.++++.
T Consensus 40 ~~p~vv~lHG~G~~~~~~~~~~~~~~L~-~~~~vi~~D~~G~G~S~~~-----------------~~~~~~~~~~~~~l~ 101 (292)
T 3l80_A 40 GNPCFVFLSGAGFFSTADNFANIIDKLP-DSIGILTIDAPNSGYSPVS-----------------NQANVGLRDWVNAIL 101 (292)
T ss_dssp CSSEEEEECCSSSCCHHHHTHHHHTTSC-TTSEEEEECCTTSTTSCCC-----------------CCTTCCHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHHh-hcCeEEEEcCCCCCCCCCC-----------------CcccccHHHHHHHHH
Confidence 45899999955 566778999999998 7999999999987654311 111234566677777
Q ss_pred HHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC---------CCC-ch----------
Q 025121 111 NLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW---------LPG-SR---------- 170 (257)
Q Consensus 111 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---------~~~-~~---------- 170 (257)
.+++..... +++|+||||||.+++.++.+. |++++++|++++. ... ..
T Consensus 102 ~~l~~~~~~-~~~lvGhS~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (292)
T 3l80_A 102 MIFEHFKFQ-SYLLCVHSIGGFAALQIMNQS-----------SKACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQKLK 169 (292)
T ss_dssp HHHHHSCCS-EEEEEEETTHHHHHHHHHHHC-----------SSEEEEEEEESCCCHHHHHHCTTSSSSHHHHHHHHTCC
T ss_pred HHHHHhCCC-CeEEEEEchhHHHHHHHHHhC-----------chheeeEEEECCCCcchhhhccccccchhHHHHHHHHh
Confidence 777766544 999999999999999999954 8899999999832 220 00
Q ss_pred -------hhh----hccccc-------------------hH----------------HHhhhcCCCEEEEccCCCCcccc
Q 025121 171 -------NLR----NKIEGS-------------------HE----------------AARRAASLPILLTHGLCDDVVPY 204 (257)
Q Consensus 171 -------~~~----~~~~~~-------------------~~----------------~~~~~~~~P~l~~~G~~D~~v~~ 204 (257)
.+. ..+... .. ..... ++|+++++|++|..++.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~-~~P~lii~g~~D~~~~~ 248 (292)
T 3l80_A 170 TAADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQSLPDFKIRLALGEEDFKTGISE-KIPSIVFSESFREKEYL 248 (292)
T ss_dssp SHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTTTSTTCCSSCCCCGGGGCCCCCT-TSCEEEEECGGGHHHHH
T ss_pred ccCchhhhHhhccccccCHHHHHHhHHHHHHHHHHHHhhhhccccchhhhhcchhhhhccCC-CCCEEEEEccCccccch
Confidence 000 000000 00 01112 78999999999999998
Q ss_pred hhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 205 KYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 205 ~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
+ + .+.+.++ +.+ ++++++||.+..+..+.+.+.|.+++.
T Consensus 249 ~-~-~~~~~~~-----~~~-~~~~~~gH~~~~e~p~~~~~~i~~fl~ 287 (292)
T 3l80_A 249 E-S-EYLNKHT-----QTK-LILCGQHHYLHWSETNSILEKVEQLLS 287 (292)
T ss_dssp T-S-TTCCCCT-----TCE-EEECCSSSCHHHHCHHHHHHHHHHHHH
T ss_pred H-H-HHhccCC-----Cce-eeeCCCCCcchhhCHHHHHHHHHHHHH
Confidence 8 5 5655554 456 899999999886655555555554443
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.87 E-value=6.6e-21 Score=153.40 Aligned_cols=188 Identities=14% Similarity=0.079 Sum_probs=124.5
Q ss_pred CCCceEEEEEccCCCCccchHH-HhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 31 GKHQATIVWLHGLGDNGSSWSQ-LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~~-~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
..+.|+||++||++++...|.. +++.|++.||.|+++|+|++|.+..... .........+++..+
T Consensus 93 ~~~~p~vv~~hG~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~--------------~~~~~~~~~~d~~~~ 158 (367)
T 2hdw_A 93 GDRLPAIVIGGPFGAVKEQSSGLYAQTMAERGFVTLAFDPSYTGESGGQPR--------------NVASPDINTEDFSAA 158 (367)
T ss_dssp SSCEEEEEEECCTTCCTTSHHHHHHHHHHHTTCEEEEECCTTSTTSCCSSS--------------SCCCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCcchhhHHHHHHHHHHCCCEEEEECCCCcCCCCCcCc--------------cccchhhHHHHHHHH
Confidence 3567899999999999988875 7888888899999999998764321110 001112222333333
Q ss_pred HHHhccCC--CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh----------------
Q 025121 110 ANLLSTEP--ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN---------------- 171 (257)
Q Consensus 110 ~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---------------- 171 (257)
.+.+.... ...+++++|||+||.+++.++.+. + +++++++++++......
T Consensus 159 ~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-----------p-~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~ 226 (367)
T 2hdw_A 159 VDFISLLPEVNRERIGVIGICGWGGMALNAVAVD-----------K-RVKAVVTSTMYDMTRVMSKGYNDSVTLEQRTRT 226 (367)
T ss_dssp HHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHC-----------T-TCCEEEEESCCCHHHHHHHTTTTCCCHHHHHHH
T ss_pred HHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcC-----------C-CccEEEEeccccccHHHhhhhccccchHHHHHH
Confidence 34443332 235999999999999999999863 4 69999998865210000
Q ss_pred ----------------------hh---h-----------cc--------------------------ccchHHHhhhcC-
Q 025121 172 ----------------------LR---N-----------KI--------------------------EGSHEAARRAAS- 188 (257)
Q Consensus 172 ----------------------~~---~-----------~~--------------------------~~~~~~~~~~~~- 188 (257)
.. . .+ ..........++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 306 (367)
T 2hdw_A 227 LEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMNMPILTYIKEISP 306 (367)
T ss_dssp HHHHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHHTTSCSCTTGGGGTT
T ss_pred HHHHHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccchhhhhhHHHhcCCChhHhHHhhcC
Confidence 00 0 00 000112334567
Q ss_pred CCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCH---H--HHHHHHHHHHHhc
Q 025121 189 LPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVP---K--EMDEVCNWLTARL 250 (257)
Q Consensus 189 ~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~---~--~~~~~~~~l~~~l 250 (257)
+|+|+++|++|. +.+.++++++. .+. +++++++++++|.... + ..+.+.+||.+.+
T Consensus 307 ~PvLii~G~~D~--~~~~~~~~~~~---~~~-~~~~~~~~g~gH~~~~~~~~~~~~~~i~~fl~~~l 367 (367)
T 2hdw_A 307 RPILLIHGERAH--SRYFSETAYAA---AAE-PKELLIVPGASHVDLYDRLDRIPFDRIAGFFDEHL 367 (367)
T ss_dssp SCEEEEEETTCT--THHHHHHHHHH---SCS-SEEEEEETTCCTTHHHHCTTTSCHHHHHHHHHHHC
T ss_pred CceEEEecCCCC--CHHHHHHHHHh---CCC-CeeEEEeCCCCeeeeecCchhHHHHHHHHHHHhhC
Confidence 999999999998 77777777776 222 7899999999998542 2 4688999998764
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.1e-21 Score=153.15 Aligned_cols=193 Identities=12% Similarity=0.046 Sum_probs=123.8
Q ss_pred eCCCCCCceEEEEEccCC---CCccchHHHhhcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhH
Q 025121 27 VRPKGKHQATIVWLHGLG---DNGSSWSQLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGL 102 (257)
Q Consensus 27 ~~~~~~~~~~vi~~HG~~---~~~~~~~~~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 102 (257)
+.+.+.+.|+|||+||.+ ++...|..++..|+ ..||.|+++|+|+.+. ......+
T Consensus 89 ~~p~~~~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~~g~~vi~~D~r~~~~---------------------~~~~~~~ 147 (326)
T 3d7r_A 89 FNFRHQIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPE---------------------FHIDDTF 147 (326)
T ss_dssp EESTTCCSSEEEEECCSTTTSCCCHHHHHHHHHHHHHHCSEEEEECCCCTTT---------------------SCHHHHH
T ss_pred EeeCCCCCeEEEEECCCcccCCCCHHHHHHHHHHHHHhCCEEEEEeCCCCCC---------------------CCchHHH
Confidence 444446678999999955 45666777888776 3589999999874211 0112233
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc------
Q 025121 103 DASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI------ 176 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~------ 176 (257)
.+....+..+++. ...++++|+||||||.+|+.++.+.+.. ....++++++++|++..........
T Consensus 148 ~d~~~~~~~l~~~-~~~~~i~l~G~S~GG~lAl~~a~~~~~~-------~~~~v~~lvl~~p~~~~~~~~~~~~~~~~~~ 219 (326)
T 3d7r_A 148 QAIQRVYDQLVSE-VGHQNVVVMGDGSGGALALSFVQSLLDN-------QQPLPNKLYLISPILDATLSNKDISDALIEQ 219 (326)
T ss_dssp HHHHHHHHHHHHH-HCGGGEEEEEETHHHHHHHHHHHHHHHT-------TCCCCSEEEEESCCCCTTCCCTTCCHHHHHH
T ss_pred HHHHHHHHHHHhc-cCCCcEEEEEECHHHHHHHHHHHHHHhc-------CCCCCCeEEEECcccccCcCChhHHhhhccc
Confidence 4444444444443 2334999999999999999999864210 0234999999998764321100000
Q ss_pred -cc------------------------chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCC
Q 025121 177 -EG------------------------SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLG 231 (257)
Q Consensus 177 -~~------------------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~ 231 (257)
.. .+.......-+|+++++|++|..+ ..+..+.+.+++.+. ++++++++|++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~--~~~~~~~~~l~~~~~-~~~~~~~~g~~ 296 (326)
T 3d7r_A 220 DAVLSQFGVNEIMKKWANGLPLTDKRISPINGTIEGLPPVYMFGGGREMTH--PDMKLFEQMMLQHHQ-YIEFYDYPKMV 296 (326)
T ss_dssp CSSCCHHHHHHHHHHHHTTSCTTSTTTSGGGSCCTTCCCEEEEEETTSTTH--HHHHHHHHHHHHTTC-CEEEEEETTCC
T ss_pred CcccCHHHHHHHHHHhcCCCCCCCCeECcccCCcccCCCEEEEEeCcccch--HHHHHHHHHHHHCCC-cEEEEEeCCCc
Confidence 00 000000112359999999999743 456778888888776 78999999999
Q ss_pred CccCH---H----HHHHHHHHHHHhcC
Q 025121 232 HYTVP---K----EMDEVCNWLTARLG 251 (257)
Q Consensus 232 H~~~~---~----~~~~~~~~l~~~l~ 251 (257)
|.+.. + ..+.+.+||.+.+.
T Consensus 297 H~~~~~~~~~~~~~~~~i~~fl~~~l~ 323 (326)
T 3d7r_A 297 HDFPIYPIRQSHKAIKQIAKSIDEDVT 323 (326)
T ss_dssp TTGGGSSSHHHHHHHHHHHHHHTSCCC
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHhh
Confidence 98764 3 45667777766554
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.1e-21 Score=169.48 Aligned_cols=198 Identities=11% Similarity=0.066 Sum_probs=131.5
Q ss_pred CCCceEEEEEccCCCCcc---chH-HHhhcC-CCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025121 31 GKHQATIVWLHGLGDNGS---SWS-QLLESL-PLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~---~~~-~~~~~l-~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
+++.|+||++||.+++.. .|. .+...+ +..||.|+++|+||+|.+.. .|.... . .......+.+.
T Consensus 493 ~~~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~------~~~~~~-~---~~~~~~~~~d~ 562 (719)
T 1z68_A 493 SKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGD------KLLYAV-Y---RKLGVYEVEDQ 562 (719)
T ss_dssp SSCEEEEEEECCCTTBCCCCCCCCCCHHHHHHHTTCCEEEEEECTTBSSSCH------HHHGGG-T---TCTTHHHHHHH
T ss_pred CCCccEEEEECCCCCcCcccccchhhHHHHHHhcCCeEEEEEcCCCCCCCch------hhHHHH-h---hccCcccHHHH
Confidence 356789999999987653 332 233434 35899999999997654211 111100 0 00112234444
Q ss_pred HHHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh---hhhc------
Q 025121 106 AAHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN---LRNK------ 175 (257)
Q Consensus 106 ~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~~~------ 175 (257)
...+..+.+.. ....+++|+||||||++++.++.+. +++++++++++|....... +...
T Consensus 563 ~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~-----------p~~~~~~v~~~~~~~~~~~~~~~~~~~~g~~~ 631 (719)
T 1z68_A 563 ITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASG-----------TGLFKCGIAVAPVSSWEYYASVYTERFMGLPT 631 (719)
T ss_dssp HHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTS-----------SSCCSEEEEESCCCCTTTSBHHHHHHHHCCSS
T ss_pred HHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhC-----------CCceEEEEEcCCccChHHhccccchhhcCCcc
Confidence 44444444432 2235999999999999999999853 7899999999886543210 0000
Q ss_pred -------c-ccchHHHhhhcCC-CEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCH----HHHHHH
Q 025121 176 -------I-EGSHEAARRAASL-PILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVP----KEMDEV 242 (257)
Q Consensus 176 -------~-~~~~~~~~~~~~~-P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~----~~~~~~ 242 (257)
+ ..........+++ |+|+++|++|..+|++.++++++.++..+. +++++++++++|.+.. +..+.+
T Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~i 710 (719)
T 1z68_A 632 KDDNLEHYKNSTVMARAEYFRNVDYLLIHGTADDNVHFQNSAQIAKALVNAQV-DFQAMWYSDQNHGLSGLSTNHLYTHM 710 (719)
T ss_dssp TTTTHHHHHHTCSGGGGGGGTTSEEEEEEETTCSSSCTHHHHHHHHHHHHTTC-CCEEEEETTCCTTCCTHHHHHHHHHH
T ss_pred cccchhhhhhCCHhHHHhcCCCCcEEEEEeCCCCCcCHHHHHHHHHHHHHCCC-ceEEEEECcCCCCCCcccHHHHHHHH
Confidence 0 0011122344566 899999999999999999999999998876 7899999999999853 345778
Q ss_pred HHHHHHhc
Q 025121 243 CNWLTARL 250 (257)
Q Consensus 243 ~~~l~~~l 250 (257)
.+||.+.|
T Consensus 711 ~~fl~~~l 718 (719)
T 1z68_A 711 THFLKQCF 718 (719)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 88888765
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=4.9e-21 Score=154.15 Aligned_cols=192 Identities=17% Similarity=0.104 Sum_probs=125.2
Q ss_pred CCceEEEEEccCCCC---ccc--hHHHhhcCCCC-ceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025121 32 KHQATIVWLHGLGDN---GSS--WSQLLESLPLP-NIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~---~~~--~~~~~~~l~~~-g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
++.|+|||+||.+.. ... |..+++.|+.. |+.|+++|+|+.+ +. . ....+.+.
T Consensus 110 ~~~Pvvv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~Vv~~dyR~~p-----~~-------------~---~~~~~~D~ 168 (365)
T 3ebl_A 110 EPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAP-----EH-------------R---YPCAYDDG 168 (365)
T ss_dssp SCCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTT-----TS-------------C---TTHHHHHH
T ss_pred CcceEEEEEcCCccccCCCchhhHHHHHHHHHHHCCCEEEEeeCCCCC-----CC-------------C---CcHHHHHH
Confidence 467999999997642 222 67788888754 9999999987421 00 0 12233343
Q ss_pred HHHHHHHhcc-----CCCCc-eEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhc----
Q 025121 106 AAHIANLLST-----EPADV-KVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNK---- 175 (257)
Q Consensus 106 ~~~~~~~~~~-----~~~~~-~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---- 175 (257)
...+..+.+. ..+.+ +|+|+|+|+||.+|+.++.+.+. ....++++|+++|++.........
T Consensus 169 ~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~~a~~~~~--------~~~~~~g~vl~~p~~~~~~~~~~~~~~~ 240 (365)
T 3ebl_A 169 WTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAAD--------EGVKVCGNILLNAMFGGTERTESERRLD 240 (365)
T ss_dssp HHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHHHHHHHHH--------TTCCCCEEEEESCCCCCSSCCHHHHHHT
T ss_pred HHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHHHHHHHHh--------cCCceeeEEEEccccCCCcCChhhhhcC
Confidence 4444333322 23456 99999999999999999986411 013799999999986532111000
Q ss_pred -----------------c-----ccchHH-----HhhhcC----CCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEE
Q 025121 176 -----------------I-----EGSHEA-----ARRAAS----LPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTF 224 (257)
Q Consensus 176 -----------------~-----~~~~~~-----~~~~~~----~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 224 (257)
. ...+.. ...... .|+|+++|++|.+++ .+..+++.+++.|+ ++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~pP~Li~~G~~D~l~~--~~~~~~~~L~~~g~-~v~l 317 (365)
T 3ebl_A 241 GKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCD--RQLAYADALREDGH-HVKV 317 (365)
T ss_dssp TTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTCCCCTTSCCCCEEEEEETTSTTHH--HHHHHHHHHHHTTC-CEEE
T ss_pred CCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhhccCCCCCEEEEEcCcccchh--HHHHHHHHHHHCCC-CEEE
Confidence 0 000000 001112 589999999997764 45889999999887 8999
Q ss_pred EEecCCCCccC--------HHHHHHHHHHHHHhcCcCCC
Q 025121 225 KSFEGLGHYTV--------PKEMDEVCNWLTARLGLEGS 255 (257)
Q Consensus 225 ~~~~g~~H~~~--------~~~~~~~~~~l~~~l~~~~~ 255 (257)
++++|++|.+. .+.++.+.+||++.++.++.
T Consensus 318 ~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~~~~~~ 356 (365)
T 3ebl_A 318 VQCENATVGFYLLPNTVHYHEVMEEISDFLNANLYYGSH 356 (365)
T ss_dssp EEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHCC----
T ss_pred EEECCCcEEEeccCCCHHHHHHHHHHHHHHHHhhhcccc
Confidence 99999999764 24678999999998877653
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=6.7e-22 Score=156.01 Aligned_cols=190 Identities=15% Similarity=0.111 Sum_probs=127.9
Q ss_pred CCCCceEEEEEccCC---CCccchHHHhhcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025121 30 KGKHQATIVWLHGLG---DNGSSWSQLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 30 ~~~~~~~vi~~HG~~---~~~~~~~~~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
.+.+.|+|||+||.+ ++...|..+++.|+ ..|+.|+++|+|++|.+.. +....++.+.
T Consensus 75 ~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~Vv~~dyrg~g~~~~------------------p~~~~d~~~~ 136 (311)
T 1jji_A 75 QKPDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHKF------------------PAAVYDCYDA 136 (311)
T ss_dssp SSSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSCT------------------THHHHHHHHH
T ss_pred CCCCceEEEEECCcccccCChhHhHHHHHHHHHHhCCEEEEecCCCCCCCCC------------------CCcHHHHHHH
Confidence 355678999999998 78888999999887 5799999999997653221 1123445555
Q ss_pred HHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhh----------
Q 025121 106 AAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN---------- 174 (257)
Q Consensus 106 ~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---------- 174 (257)
+.++.+.++... ..++++|+|||+||.+++.++.+.+.. ....++++++++|+.........
T Consensus 137 ~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~-------~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~ 209 (311)
T 1jji_A 137 TKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDS-------GEDFIKHQILIYPVVNFVAPTPSLLEFGEGLWI 209 (311)
T ss_dssp HHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHT-------TCCCEEEEEEESCCCCSSSCCHHHHHTSSSCSS
T ss_pred HHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhc-------CCCCceEEEEeCCccCCCCCCccHHHhcCCCcc
Confidence 555555544322 234899999999999999998864110 02249999999987643211000
Q ss_pred -----------cc-cc---------chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCc
Q 025121 175 -----------KI-EG---------SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHY 233 (257)
Q Consensus 175 -----------~~-~~---------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~ 233 (257)
.+ .. .+.......-.|+++++|+.|.+++ .+..+.+++++.++ ++++++++|++|.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~P~li~~G~~D~l~~--~~~~~~~~l~~~g~-~~~~~~~~g~~H~ 286 (311)
T 1jji_A 210 LDQKIMSWFSEQYFSREEDKFNPLASVIFADLENLPPALIITAEYDPLRD--EGEVFGQMLRRAGV-EASIVRYRGVLHG 286 (311)
T ss_dssp CCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCTTCCCEEEEEEEECTTHH--HHHHHHHHHHHTTC-CEEEEEEEEEETT
T ss_pred CCHHHHHHHHHHhCCCCccCCCcccCcccccccCCChheEEEcCcCcchH--HHHHHHHHHHHcCC-CEEEEEECCCCee
Confidence 00 00 0000001112599999999999974 56778899988887 7999999999997
Q ss_pred cCH---------HHHHHHHHHHH
Q 025121 234 TVP---------KEMDEVCNWLT 247 (257)
Q Consensus 234 ~~~---------~~~~~~~~~l~ 247 (257)
+.. +..+.+.+||+
T Consensus 287 ~~~~~~~~~~~~~~~~~i~~fl~ 309 (311)
T 1jji_A 287 FINYYPVLKAARDAINQIAALLV 309 (311)
T ss_dssp GGGGTTTCHHHHHHHHHHHHHHH
T ss_pred ccccCCcCHHHHHHHHHHHHHHh
Confidence 752 23456666665
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.9e-21 Score=153.73 Aligned_cols=196 Identities=14% Similarity=0.009 Sum_probs=129.1
Q ss_pred CCCCCCceEEEEEccCC---CCccchHHHhhcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHH
Q 025121 28 RPKGKHQATIVWLHGLG---DNGSSWSQLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLD 103 (257)
Q Consensus 28 ~~~~~~~~~vi~~HG~~---~~~~~~~~~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 103 (257)
.|.+.+.|+||++||.| ++...|..++..|+ ..|+.|+++|+|..+. . ..+...++..
T Consensus 79 ~P~~~~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~-----~-------------~~p~~~~D~~ 140 (317)
T 3qh4_A 79 RAAPTPAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPE-----H-------------PYPAALHDAI 140 (317)
T ss_dssp ECSCSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTT-----S-------------CTTHHHHHHH
T ss_pred ecCCCCCcEEEEECCCcCccCChHHHHHHHHHHHHHcCCEEEEecCCCCCC-----C-------------CCchHHHHHH
Confidence 34446789999999977 56667888888887 4599999999774221 0 1111233333
Q ss_pred HHHHHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhh-cc-----
Q 025121 104 ASAAHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN-KI----- 176 (257)
Q Consensus 104 ~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~----- 176 (257)
+.++++.+..... .+.++|+|+|+|+||.+++.++.+.+.. ....++++++++|++........ ..
T Consensus 141 ~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~-------~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~ 213 (317)
T 3qh4_A 141 EVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADG-------SLPPVIFQLLHQPVLDDRPTASRSEFRATPA 213 (317)
T ss_dssp HHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHT-------SSCCCCEEEEESCCCCSSCCHHHHHTTTCSS
T ss_pred HHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhc-------CCCCeeEEEEECceecCCCCcCHHHhcCCCC
Confidence 3344443332222 2335999999999999999999864211 12358999999988765311000 00
Q ss_pred --------------c-------cchHHHh-hhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCcc
Q 025121 177 --------------E-------GSHEAAR-RAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYT 234 (257)
Q Consensus 177 --------------~-------~~~~~~~-~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~ 234 (257)
. ..+.... ...-.|+++++|+.|.+++ .+..+.+++++.++ ++++++++|++|.+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~lpP~li~~G~~D~~~~--~~~~~a~~l~~~g~-~~~l~~~~g~~H~f 290 (317)
T 3qh4_A 214 FDGEAASLMWRHYLAGQTPSPESVPGRRGQLAGLPATLITCGEIDPFRD--EVLDYAQRLLGAGV-STELHIFPRACHGF 290 (317)
T ss_dssp SCHHHHHHHHHHHHTTCCCCTTTCGGGCSCCTTCCCEEEEEEEESTTHH--HHHHHHHHHHHTTC-CEEEEEEEEEETTH
T ss_pred cCHHHHHHHHHHhcCCCCCCcccCCCcccccCCCCceeEEecCcCCCch--hHHHHHHHHHHcCC-CEEEEEeCCCccch
Confidence 0 0000000 0112499999999999876 57788999998887 89999999999985
Q ss_pred C---------HHHHHHHHHHHHHhcC
Q 025121 235 V---------PKEMDEVCNWLTARLG 251 (257)
Q Consensus 235 ~---------~~~~~~~~~~l~~~l~ 251 (257)
. .+..+.+.+||++.+.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~l~~~l~ 316 (317)
T 3qh4_A 291 DSLLPEWTTSQRLFAMQGHALADAFY 316 (317)
T ss_dssp HHHCTTSHHHHHHHHHHHHHHHHHHC
T ss_pred hhhcCCchHHHHHHHHHHHHHHHHhC
Confidence 4 4457889999988764
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=99.77 E-value=2e-23 Score=163.29 Aligned_cols=185 Identities=15% Similarity=0.100 Sum_probs=122.2
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
..|+|||+||++++...|..+++.|+ .||.|+++|+||+|.+...... ......++.+.++++.++
T Consensus 24 ~~p~vv~lHG~~~~~~~~~~~~~~l~-~g~~v~~~D~~G~G~s~~~~~~-------------~~~~~~~~~~~~~~l~~~ 89 (304)
T 3b12_A 24 SGPALLLLHGFPQNLHMWARVAPLLA-NEYTVVCADLRGYGGSSKPVGA-------------PDHANYSFRAMASDQREL 89 (304)
Confidence 45789999999999999999999998 8999999999988654322100 001123345556666666
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch----------------------
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR---------------------- 170 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------------------- 170 (257)
++..... +++|+||||||.+++.++.+. |++++++|++++..+...
T Consensus 90 l~~l~~~-~~~lvG~S~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (304)
T 3b12_A 90 MRTLGFE-RFHLVGHARGGRTGHRMALDH-----------PDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQPA 157 (304)
Confidence 6554333 899999999999999999854 677788777765322100
Q ss_pred -------------hhhh-ccc-----------------------------------cchH----HH----hhhcCCCEEE
Q 025121 171 -------------NLRN-KIE-----------------------------------GSHE----AA----RRAASLPILL 193 (257)
Q Consensus 171 -------------~~~~-~~~-----------------------------------~~~~----~~----~~~~~~P~l~ 193 (257)
.+.. .+. .... .. ...+++|+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~li 237 (304)
T 3b12_A 158 PYPEKVIGADPDTFYEGCLFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQCPALV 237 (304)
Confidence 0000 000 0000 00 3567899999
Q ss_pred EccCCCCcc-cchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHH----HHHHHHHHHh
Q 025121 194 THGLCDDVV-PYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEM----DEVCNWLTAR 249 (257)
Q Consensus 194 ~~G~~D~~v-~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~----~~~~~~l~~~ 249 (257)
++|++|..+ +.+..+.+.+.++ +++++++ ++||.+..+.. +.+.+||.+.
T Consensus 238 i~G~~D~~~~~~~~~~~~~~~~~-----~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl~~~ 292 (304)
T 3b12_A 238 FSGSAGLMHSLFEMQVVWAPRLA-----NMRFASL-PGGHFFVDRFPDDTARILREFLSDA 292 (304)
Confidence 999999554 5555555555554 5677788 89999875544 4555666554
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=6.7e-21 Score=152.77 Aligned_cols=181 Identities=15% Similarity=0.088 Sum_probs=120.4
Q ss_pred CCceEEEEEccCCC---Cccc--hHHHhhcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025121 32 KHQATIVWLHGLGD---NGSS--WSQLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 32 ~~~~~vi~~HG~~~---~~~~--~~~~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
.+.|+|||+||.+. +... |..+++.|+ +.|+.|+++|+|+.+.. .. ...+.+.
T Consensus 111 ~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~------------------~~---~~~~~D~ 169 (351)
T 2zsh_A 111 DIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPEN------------------PY---PCAYDDG 169 (351)
T ss_dssp SSCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTTS------------------CT---THHHHHH
T ss_pred CCceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCCEEEEecCCCCCCC------------------CC---chhHHHH
Confidence 46789999999553 3333 788888887 67999999998863211 00 1223333
Q ss_pred HHHHHHHhcc-----CCCCc-eEEEEEechhHHHHHHHHHhccccCCCCCCCccc---ccceEEEeccCCCCchhhhh--
Q 025121 106 AAHIANLLST-----EPADV-KVGIGGFSMGAAVALYSATCCALGRYGNGIPYYV---NLRAVVGLSGWLPGSRNLRN-- 174 (257)
Q Consensus 106 ~~~~~~~~~~-----~~~~~-~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~-- 174 (257)
...+..+.+. ..+.+ +++|+|||+||.+++.++.+. ++ ++++++++++++........
T Consensus 170 ~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~-----------~~~~~~v~~~vl~~p~~~~~~~~~~~~ 238 (351)
T 2zsh_A 170 WIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRA-----------GESGIDVLGNILLNPMFGGNERTESEK 238 (351)
T ss_dssp HHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHH-----------HTTTCCCCEEEEESCCCCCSSCCHHHH
T ss_pred HHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHh-----------hccCCCeeEEEEECCccCCCcCChhhh
Confidence 3444333332 23456 999999999999999999864 44 89999999987643211000
Q ss_pred ------------------ccc------cc----h----HHHhhhcCC-CEEEEccCCCCcccchhhHHHHHHhhhcCcee
Q 025121 175 ------------------KIE------GS----H----EAARRAASL-PILLTHGLCDDVVPYKYGEKSANCLSISGFRH 221 (257)
Q Consensus 175 ------------------~~~------~~----~----~~~~~~~~~-P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~ 221 (257)
.+. .. . ......+.+ |+|+++|++|.+++ .+..+++++++.+. +
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~pP~Lii~G~~D~~~~--~~~~~~~~l~~~g~-~ 315 (351)
T 2zsh_A 239 SLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRD--WQLAYAEGLKKAGQ-E 315 (351)
T ss_dssp HHTTTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTSCCCTTCCCCEEEEEEETTSTTHH--HHHHHHHHHHHTTC-C
T ss_pred hcCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCCccchhhCCCCCEEEEEcCCCcchH--HHHHHHHHHHHcCC-C
Confidence 000 00 0 001112244 99999999999887 46778999988876 7
Q ss_pred eEEEEecCCCCccCH----HH----HHHHHHHHH
Q 025121 222 LTFKSFEGLGHYTVP----KE----MDEVCNWLT 247 (257)
Q Consensus 222 ~~~~~~~g~~H~~~~----~~----~~~~~~~l~ 247 (257)
+++++++|++|.+.. +. .+.+.+||.
T Consensus 316 ~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~ 349 (351)
T 2zsh_A 316 VKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVN 349 (351)
T ss_dssp EEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhc
Confidence 899999999998753 33 455555654
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.86 E-value=2.1e-20 Score=146.91 Aligned_cols=202 Identities=15% Similarity=0.145 Sum_probs=135.0
Q ss_pred eCCCCCCceEEEEEccC--CCCccchHHH---hhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCC-----CC
Q 025121 27 VRPKGKHQATIVWLHGL--GDNGSSWSQL---LESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDD-----GP 96 (257)
Q Consensus 27 ~~~~~~~~~~vi~~HG~--~~~~~~~~~~---~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~-----~~ 96 (257)
++|..++.|+||++||. +++...|... .+.++..++.|+++|.++. +||........ ..
T Consensus 27 ~~p~~~~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~p~~~~~-----------~~~~~~~~~~~~~g~~~~ 95 (304)
T 1sfr_A 27 FQSGGANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQS-----------SFYSDWYQPACGKAGCQT 95 (304)
T ss_dssp EECCSTTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTT-----------CTTCBCSSCEEETTEEEC
T ss_pred ECCCCCCCCEEEEeCCCCCCCCcchhhcCCCHHHHHhcCCeEEEEECCCCC-----------ccccccCCcccccccccc
Confidence 34444678999999999 6677778764 3556678999999997532 12210000000 01
Q ss_pred CchhhHHHHHHHHHHHhcc--CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh-
Q 025121 97 EDWEGLDASAAHIANLLST--EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR- 173 (257)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~- 173 (257)
.....+ ..+.+..++++ ....++++|+|+||||.+|+.++.+. |+.++++++++|.+.......
T Consensus 96 ~~~~~~--~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~-----------p~~~~~~v~~sg~~~~~~~~~~ 162 (304)
T 1sfr_A 96 YKWETF--LTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYH-----------PQQFVYAGAMSGLLDPSQAMGP 162 (304)
T ss_dssp CBHHHH--HHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHC-----------TTTEEEEEEESCCSCTTSTTHH
T ss_pred ccHHHH--HHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhC-----------ccceeEEEEECCccCccccchh
Confidence 112221 12344444443 12234899999999999999999964 899999999999765432100
Q ss_pred h-------------------------ccccchHHHh-hh--cCCCEEEEccCCCC--------------cccchhhHHHH
Q 025121 174 N-------------------------KIEGSHEAAR-RA--ASLPILLTHGLCDD--------------VVPYKYGEKSA 211 (257)
Q Consensus 174 ~-------------------------~~~~~~~~~~-~~--~~~P~l~~~G~~D~--------------~v~~~~~~~~~ 211 (257)
. +....+.... .. ..+|+++++|+.|. .++.+.++++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~l~~~~~pi~l~~G~~D~~~~~~~~~~~~~~e~~~~~~~~~~~ 242 (304)
T 1sfr_A 163 TLIGLAMGDAGGYKASDMWGPKEDPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPAKFLEGFVRTSNIKFQ 242 (304)
T ss_dssp HHHHHHHHHTTSCCHHHHHCSTTSTHHHHSCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhhhccccchHHhcCCcchhhhHhcCHHHHHHHhhhcCCeEEEEecCCCCccccccccccchhHHHHHHHHHHHH
Confidence 0 0000000011 11 36899999999998 67888999999
Q ss_pred HHhhhcC-ceeeEEEEecCCCCccC--HHHHHHHHHHHHHhcCcC
Q 025121 212 NCLSISG-FRHLTFKSFEGLGHYTV--PKEMDEVCNWLTARLGLE 253 (257)
Q Consensus 212 ~~l~~~~-~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~~~l~~~ 253 (257)
+.+++.| + ++++.++++++|.+. .+.+..++.||.+.+...
T Consensus 243 ~~L~~~G~~-~v~~~~~~~g~H~~~~w~~~l~~~l~~l~~~l~~~ 286 (304)
T 1sfr_A 243 DAYNAGGGH-NGVFDFPDSGTHSWEYWGAQLNAMKPDLQRALGAT 286 (304)
T ss_dssp HHHHHTTCC-SEEEECCSCCCSSHHHHHHHHHHTHHHHHHHHTCC
T ss_pred HHHHhCCCC-ceEEEecCCCccCHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999998 8 899999976799865 677889999999988754
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=99.86 E-value=8e-21 Score=163.71 Aligned_cols=213 Identities=14% Similarity=0.013 Sum_probs=143.6
Q ss_pred CCCCCceEEeCCC---CCCceEEEEEccCCCCccc--hHHHh-hcCCCCceEEEccCCCCCCcccCCCCcccccccCCCC
Q 025121 18 TFEFGRTHVVRPK---GKHQATIVWLHGLGDNGSS--WSQLL-ESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGEL 91 (257)
Q Consensus 18 ~~~~~~~~~~~~~---~~~~~~vi~~HG~~~~~~~--~~~~~-~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~ 91 (257)
+..+...++.++. +.+.|+||++||..+.... |.... +.|+.+||.|+.+|.||.|... ..|......
T Consensus 459 G~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d~RGsg~~G------~~~~~~~~~ 532 (711)
T 4hvt_A 459 GVKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLANIRGGGEFG------PEWHKSAQG 532 (711)
T ss_dssp SCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEECCTTSSTTC------HHHHHTTSG
T ss_pred CeEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEeCCCCCCcc------hhHHHhhhh
Confidence 3444455555543 3578999999997554433 43333 4677789999999988654211 233322111
Q ss_pred CCCCCCchhhHHHHHHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch
Q 025121 92 SDDGPEDWEGLDASAAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR 170 (257)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 170 (257)
......+.+.+..+..++++.. ..++++++|+|+||++++.++.+. |+.++++|+.+|......
T Consensus 533 ----~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~-----------pd~f~a~V~~~pv~D~~~ 597 (711)
T 4hvt_A 533 ----IKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQR-----------PELFGAVACEVPILDMIR 597 (711)
T ss_dssp ----GGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHC-----------GGGCSEEEEESCCCCTTT
T ss_pred ----ccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhC-----------cCceEEEEEeCCccchhh
Confidence 1123345555555555555533 346999999999999999999854 889999999988765432
Q ss_pred hhh--------hcccc-------------chHHHhhhcCC--CEEEEccCCCCcccchhhHHHHHHh-hhcCceeeEEEE
Q 025121 171 NLR--------NKIEG-------------SHEAARRAASL--PILLTHGLCDDVVPYKYGEKSANCL-SISGFRHLTFKS 226 (257)
Q Consensus 171 ~~~--------~~~~~-------------~~~~~~~~~~~--P~l~~~G~~D~~v~~~~~~~~~~~l-~~~~~~~~~~~~ 226 (257)
... ..+.. .+......+++ |+|++||++|..||++++.++++.+ ++.+. ++++++
T Consensus 598 ~~~~~~~~~~~~~~G~p~~~~~~~~l~~~SP~~~v~~i~~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~g~-pv~l~~ 676 (711)
T 4hvt_A 598 YKEFGAGHSWVTEYGDPEIPNDLLHIKKYAPLENLSLTQKYPTVLITDSVLDQRVHPWHGRIFEYVLAQNPNT-KTYFLE 676 (711)
T ss_dssp GGGSTTGGGGHHHHCCTTSHHHHHHHHHHCGGGSCCTTSCCCEEEEEEETTCCSSCTHHHHHHHHHHTTCTTC-CEEEEE
T ss_pred hhccccchHHHHHhCCCcCHHHHHHHHHcCHHHHHhhcCCCCCEEEEecCCCCcCChHHHHHHHHHHHHHcCC-CEEEEE
Confidence 111 00000 01111223344 9999999999999999999999999 88887 799999
Q ss_pred ecCCCCccC------HHHHHHHHHHHHHhcCc
Q 025121 227 FEGLGHYTV------PKEMDEVCNWLTARLGL 252 (257)
Q Consensus 227 ~~g~~H~~~------~~~~~~~~~~l~~~l~~ 252 (257)
++++||.+. .+....+.+||.+.++.
T Consensus 677 ~p~~gHg~~~~~~~~~~~~~~i~~FL~~~Lg~ 708 (711)
T 4hvt_A 677 SKDSGHGSGSDLKESANYFINLYTFFANALKL 708 (711)
T ss_dssp ESSCCSSSCSSHHHHHHHHHHHHHHHHHHHTC
T ss_pred ECCCCCcCcCCcchHHHHHHHHHHHHHHHhCC
Confidence 999999874 22356788999998864
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.86 E-value=8.3e-20 Score=141.45 Aligned_cols=188 Identities=17% Similarity=0.196 Sum_probs=117.8
Q ss_pred EeCCCCCCceEEEEEccCC---CCccch-HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhh
Q 025121 26 VVRPKGKHQATIVWLHGLG---DNGSSW-SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEG 101 (257)
Q Consensus 26 ~~~~~~~~~~~vi~~HG~~---~~~~~~-~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 101 (257)
++.+.+.+.|+|||+||.| ++...| ..+...++..|+.|+++|+|+.+. ..-...
T Consensus 19 ~y~p~~~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe---------------------~~~p~~ 77 (274)
T 2qru_A 19 IYPTTTEPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPN---------------------TKIDHI 77 (274)
T ss_dssp EECCSSSSCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTT---------------------SCHHHH
T ss_pred EEcCCCCCCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCC---------------------CCCcHH
Confidence 3444335678999999988 555555 456666777899999999884221 111223
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-----------
Q 025121 102 LDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR----------- 170 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----------- 170 (257)
+.+..+.+..+.++....++++|+|+|+||.+|+.++.+.. ..+..++++++++|+.....
T Consensus 78 ~~D~~~al~~l~~~~~~~~~i~l~G~SaGG~lA~~~a~~~~--------~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~ 149 (274)
T 2qru_A 78 LRTLTETFQLLNEEIIQNQSFGLCGRSAGGYLMLQLTKQLQ--------TLNLTPQFLVNFYGYTDLEFIKEPRKLLKQA 149 (274)
T ss_dssp HHHHHHHHHHHHHHTTTTCCEEEEEETHHHHHHHHHHHHHH--------HTTCCCSCEEEESCCSCSGGGGSCCCSCSSC
T ss_pred HHHHHHHHHHHHhccccCCcEEEEEECHHHHHHHHHHHHHh--------cCCCCceEEEEEcccccccccCCchhhcccc
Confidence 34444444444433322459999999999999999997320 11445677776655432000
Q ss_pred ----hhhhc----------c------------------------------ccchHHHhhhcCCCEEEEccCCCCcccchh
Q 025121 171 ----NLRNK----------I------------------------------EGSHEAARRAASLPILLTHGLCDDVVPYKY 206 (257)
Q Consensus 171 ----~~~~~----------~------------------------------~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~ 206 (257)
..... . ........... +|+++++|+.|..++.+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-pP~li~~G~~D~~~~~~~ 228 (274)
T 2qru_A 150 ISAKEIAAIDQTKPVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDETLKTF-PPCFSTASSSDEEVPFRY 228 (274)
T ss_dssp CCSGGGTTSCCSSCCSCCTTCTTHHHHHHHHHTTCHHHHHTCCTTSCCGGGCCCHHHHHTS-CCEEEEEETTCSSSCTHH
T ss_pred ccHHHHhhhcccCCCCCCccccchhhhhhhhhhcchhhccCcccccccccCCCChhhhcCC-CCEEEEEecCCCCcCHHH
Confidence 00000 0 00000011222 699999999999999888
Q ss_pred hHHHHHHhhhcCceeeEEEEecCCCCccCH--------HHHHHHHHHHHH
Q 025121 207 GEKSANCLSISGFRHLTFKSFEGLGHYTVP--------KEMDEVCNWLTA 248 (257)
Q Consensus 207 ~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~--------~~~~~~~~~l~~ 248 (257)
++++.+.++ ++++++++|++|.+.. +..+.+.+||++
T Consensus 229 ~~~l~~~~~-----~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 229 SKKIGRTIP-----ESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKE 273 (274)
T ss_dssp HHHHHHHST-----TCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCC-----CcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhh
Confidence 888888876 6799999999998752 225667777754
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-20 Score=147.34 Aligned_cols=199 Identities=14% Similarity=0.137 Sum_probs=122.1
Q ss_pred CCceEEEEEccCCCCccch-HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCC---CC-CCC---CCchhhHH
Q 025121 32 KHQATIVWLHGLGDNGSSW-SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGE---LS-DDG---PEDWEGLD 103 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~-~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~---~~-~~~---~~~~~~~~ 103 (257)
++.|+||++||++++...| ..+.+.+...||.|+++|+++.+. +...||..+. .+ ... .....++.
T Consensus 52 ~~~p~vv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~~~------p~~~~~~~g~~~g~s~~~~~~~~~~~~~~~ 125 (304)
T 3d0k_A 52 PDRPVVVVQHGVLRNGADYRDFWIPAADRHKLLIVAPTFSDEIW------PGVESYNNGRAFTAAGNPRHVDGWTYALVA 125 (304)
T ss_dssp TTSCEEEEECCTTCCHHHHHHHTHHHHHHHTCEEEEEECCTTTS------CHHHHTTTTTCBCTTSCBCCGGGSTTHHHH
T ss_pred CCCcEEEEeCCCCCCHHHHHHHHHHHHHHCCcEEEEeCCccccC------CCccccccCccccccCCCCcccchHHHHHH
Confidence 5678999999999998888 666777777899999999885421 1112222211 00 000 01112233
Q ss_pred HHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcc-cccceEEEec-cCCCCchhhhh---cc--
Q 025121 104 ASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYY-VNLRAVVGLS-GWLPGSRNLRN---KI-- 176 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~-~~~~~~~~~~~---~~-- 176 (257)
+.++.+.+.. ....++++|+||||||.+++.++.+. + .+++++++.+ +++........ .+
T Consensus 126 ~~~~~l~~~~--~~~~~~i~l~G~S~GG~~a~~~a~~~-----------p~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~ 192 (304)
T 3d0k_A 126 RVLANIRAAE--IADCEQVYLFGHSAGGQFVHRLMSSQ-----------PHAPFHAVTAANPGWYTLPTFEHRFPEGLDG 192 (304)
T ss_dssp HHHHHHHHTT--SCCCSSEEEEEETHHHHHHHHHHHHS-----------CSTTCSEEEEESCSSCCCSSTTSBTTTSSBT
T ss_pred HHHHHHHhcc--CCCCCcEEEEEeChHHHHHHHHHHHC-----------CCCceEEEEEecCcccccCCccccCccccCC
Confidence 3333333221 23345999999999999999999854 5 3688887655 55432221100 00
Q ss_pred -ccchHHHhhhcCCCEEEEccCCCCccc-----------------chhhHHHHHHhh----hcCce-eeEEEEecCCCCc
Q 025121 177 -EGSHEAARRAASLPILLTHGLCDDVVP-----------------YKYGEKSANCLS----ISGFR-HLTFKSFEGLGHY 233 (257)
Q Consensus 177 -~~~~~~~~~~~~~P~l~~~G~~D~~v~-----------------~~~~~~~~~~l~----~~~~~-~~~~~~~~g~~H~ 233 (257)
............+|++++||+.|.++. .+.++.+++.++ +.+.+ +++++++||+||.
T Consensus 193 ~~~~~~~~~~~~~~p~li~~G~~D~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~g~~~~~~~~~~pg~gH~ 272 (304)
T 3d0k_A 193 VGLTEDHLARLLAYPMTILAGDQDIATDDPNLPSEPAALRQGPHRYARARHYYEAGQRAAAQRGLPFGWQLQVVPGIGHD 272 (304)
T ss_dssp TTCCHHHHHHHHHSCCEEEEETTCCCC--CCSCCSHHHHTTCSSHHHHHHHHHHHHHHHHHHHTCCCCCEEEEETTCCSC
T ss_pred CCCCHHHHHhhhcCCEEEEEeCCCCCccccccccChhhhccCccHHHHHHHHHHHHHHHHHhcCCCcceEEEEeCCCCCc
Confidence 011222234457999999999999742 233455566554 45541 3899999999999
Q ss_pred cCHHHHHHHHHHHHHhc
Q 025121 234 TVPKEMDEVCNWLTARL 250 (257)
Q Consensus 234 ~~~~~~~~~~~~l~~~l 250 (257)
+. ...+.+.+||.+..
T Consensus 273 ~~-~~~~~~~~~~~~~~ 288 (304)
T 3d0k_A 273 GQ-AMSQVCASLWFDGR 288 (304)
T ss_dssp HH-HHHHHHHHHHHTSS
T ss_pred hH-HHHHHHHHHHhhhh
Confidence 74 45677888876543
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.3e-20 Score=150.10 Aligned_cols=179 Identities=9% Similarity=0.050 Sum_probs=112.6
Q ss_pred CCCceEEEEEccCCCCccc---hHHHhhcCCCCceEEEccCC----CCCCcccCCCCcccccccCCCCCCCCCCchhhHH
Q 025121 31 GKHQATIVWLHGLGDNGSS---WSQLLESLPLPNIKWICPTA----PTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLD 103 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~---~~~~~~~l~~~g~~v~~~d~----~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 103 (257)
++..|+|||+||++++... |..+++.| ..||+|+++|+ ||+|.+. .....
T Consensus 35 ~~~~~~vvllHG~~~~~~~~~~~~~l~~~L-~~g~~Vi~~Dl~~D~~G~G~S~----------------------~~~~~ 91 (335)
T 2q0x_A 35 MDARRCVLWVGGQTESLLSFDYFTNLAEEL-QGDWAFVQVEVPSGKIGSGPQD----------------------HAHDA 91 (335)
T ss_dssp TTSSSEEEEECCTTCCTTCSTTHHHHHHHH-TTTCEEEEECCGGGBTTSCSCC----------------------HHHHH
T ss_pred CCCCcEEEEECCCCccccchhHHHHHHHHH-HCCcEEEEEeccCCCCCCCCcc----------------------ccCcH
Confidence 3456799999999876543 56788888 47999999965 5443211 11112
Q ss_pred HHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-------------
Q 025121 104 ASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR------------- 170 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------------- 170 (257)
+++..+.+.+.......+++|+||||||.+++.++.+. .+|++++++|++++......
T Consensus 92 ~d~~~~~~~l~~~l~~~~~~LvGhSmGG~iAl~~A~~~---------~~p~rV~~lVL~~~~~~~~~~~~~~~~~~~~~~ 162 (335)
T 2q0x_A 92 EDVDDLIGILLRDHCMNEVALFATSTGTQLVFELLENS---------AHKSSITRVILHGVVCDPENPLFTPEGCAARKE 162 (335)
T ss_dssp HHHHHHHHHHHHHSCCCCEEEEEEGGGHHHHHHHHHHC---------TTGGGEEEEEEEEECCCTTSTTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEECHhHHHHHHHHHhc---------cchhceeEEEEECCcccchhcccCHHHHHHHHH
Confidence 22222222222212234999999999999999999841 13788999998876432110
Q ss_pred hhhh---------------cc-------------cc----------------chHHHhhhcCCCEEEEccCCCCcccchh
Q 025121 171 NLRN---------------KI-------------EG----------------SHEAARRAASLPILLTHGLCDDVVPYKY 206 (257)
Q Consensus 171 ~~~~---------------~~-------------~~----------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~ 206 (257)
.... .. .. ........+++|+|+++|++|.++|++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLvi~G~~D~~vp~~~ 242 (335)
T 2q0x_A 163 HVEKLMAEGRGEDSLAMLKHYDIPITPARLAGGGFPTLQEAVWNPCIRKEFDVLRRSVGVIKVPLLLMLAHNVQYKPSDE 242 (335)
T ss_dssp HHHHHHHHTCTTCGGGGTTTCSSCCCHHHHHTCSCSSHHHHTHHHHHTTCHHHHHHTGGGCCSCEEEEEECCTTCCCCHH
T ss_pred HHHHHhhccCccccccchhhccCccCHHHHhhccCCCchhhhhhhhhhhhhhHHHHHHhcCCCCeEEEEecCCCCCChhh
Confidence 0000 00 00 0001234578999999999999999864
Q ss_pred -----hHHHHHHhhhcCceeeE--------E-----EEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 207 -----GEKSANCLSISGFRHLT--------F-----KSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 207 -----~~~~~~~l~~~~~~~~~--------~-----~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
.+.+.+.++ +.+ + ++++++|| +..+.+.+||.+..
T Consensus 243 ~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~i~~agH----e~~~~i~~FL~~~~ 295 (335)
T 2q0x_A 243 EVGTVLEGVRDHTG-----CNRVTVSYFNDTCDELRRVLKAAES----EHVAAILQFLADED 295 (335)
T ss_dssp HHHHHHHHHHHHSS-----SSCEEEEECCCEECTTSCEEECCHH----HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcC-----ccccccccccchhhhhhcccCCCCC----HHHHHHHHHHHhhh
Confidence 344444444 333 5 78999999 56888889997643
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=99.85 E-value=2e-20 Score=146.17 Aligned_cols=105 Identities=15% Similarity=0.057 Sum_probs=80.3
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.++|||+||++++...|..++..|+ .+|+|+++|+||+|.+...... ...........++++.+++
T Consensus 25 g~~~vllHG~~~~~~~w~~~~~~l~-~~~~vi~~Dl~G~G~s~~~~~~-------------~~~~~~~~~~~~~~~~~~~ 90 (291)
T 3qyj_A 25 GAPLLLLHGYPQTHVMWHKIAPLLA-NNFTVVATDLRGYGDSSRPASV-------------PHHINYSKRVMAQDQVEVM 90 (291)
T ss_dssp SSEEEEECCTTCCGGGGTTTHHHHT-TTSEEEEECCTTSTTSCCCCCC-------------GGGGGGSHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHh-CCCEEEEEcCCCCCCCCCCCCC-------------ccccccCHHHHHHHHHHHH
Confidence 4689999999999999999999887 6899999999988755432110 0001234566666677777
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEecc
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG 164 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 164 (257)
+..... +++|+||||||.+++.++.+. |++++++++++.
T Consensus 91 ~~l~~~-~~~l~GhS~Gg~ia~~~a~~~-----------p~~v~~lvl~~~ 129 (291)
T 3qyj_A 91 SKLGYE-QFYVVGHDRGARVAHRLALDH-----------PHRVKKLALLDI 129 (291)
T ss_dssp HHTTCS-SEEEEEETHHHHHHHHHHHHC-----------TTTEEEEEEESC
T ss_pred HHcCCC-CEEEEEEChHHHHHHHHHHhC-----------chhccEEEEECC
Confidence 665444 899999999999999999964 889999998763
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.7e-20 Score=164.30 Aligned_cols=214 Identities=17% Similarity=0.009 Sum_probs=138.0
Q ss_pred CCCCCceEEeCCC-CCCceEEEEEccCCCCcc--chHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCC
Q 025121 18 TFEFGRTHVVRPK-GKHQATIVWLHGLGDNGS--SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDD 94 (257)
Q Consensus 18 ~~~~~~~~~~~~~-~~~~~~vi~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~ 94 (257)
+..+...++.++. ..+.|+||++||..+... .|......|+.+||.|+++|.||+|... ..|...+..
T Consensus 471 g~~i~~~~~~p~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g------~~~~~~~~~--- 541 (741)
T 1yr2_A 471 GTKVPMFIVRRKDAKGPLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEYG------DAWHDAGRR--- 541 (741)
T ss_dssp SCEEEEEEEEETTCCSCCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTTH------HHHHHTTSG---
T ss_pred CCEEEEEEEecCCCCCCCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCCC------HHHHHhhhh---
Confidence 3344444555544 456799999999876654 3555556666789999999998754221 233322110
Q ss_pred CCCchhhHHHHHHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh
Q 025121 95 GPEDWEGLDASAAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR 173 (257)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 173 (257)
......+.+.+..+..++++.. ..++++++|+|+||.+++.++.+. |++++++|+.+|+........
T Consensus 542 -~~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~-----------p~~~~~~v~~~~~~d~~~~~~ 609 (741)
T 1yr2_A 542 -DKKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQR-----------PDLFAAASPAVGVMDMLRFDQ 609 (741)
T ss_dssp -GGTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHC-----------GGGCSEEEEESCCCCTTSGGG
T ss_pred -hcCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhC-----------chhheEEEecCCccccccccC
Confidence 1112345555666655555532 345999999999999999999864 889999999988764322110
Q ss_pred --------hccc-------------cchHHHhhh-cC-CCEEEEccCCCCcccchhhHHHHHHhhh---cCceeeEEEEe
Q 025121 174 --------NKIE-------------GSHEAARRA-AS-LPILLTHGLCDDVVPYKYGEKSANCLSI---SGFRHLTFKSF 227 (257)
Q Consensus 174 --------~~~~-------------~~~~~~~~~-~~-~P~l~~~G~~D~~v~~~~~~~~~~~l~~---~~~~~~~~~~~ 227 (257)
..+. ..+...... ++ +|+|+++|++|..|++..+.++++.++. .+. +++++++
T Consensus 610 ~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~g~-~~~l~~~ 688 (741)
T 1yr2_A 610 FTAGRYWVDDYGYPEKEADWRVLRRYSPYHNVRSGVDYPAILVTTADTDDRVVPGHSFKYTAALQTAAIGPK-PHLIRIE 688 (741)
T ss_dssp STTGGGGHHHHCCTTSHHHHHHHHTTCGGGCCCTTSCCCEEEEEECSCCSSSCTHHHHHHHHHHHHSCCCSS-CEEEEEC
T ss_pred CCCCchhHHHcCCCCCHHHHHHHHHcCchhhhhccCCCCCEEEEeeCCCCCCChhHHHHHHHHHhhhhcCCC-CEEEEEe
Confidence 0000 011111222 44 4999999999999999999999999998 665 6899999
Q ss_pred cCCCCccCH------HHHHHHHHHHHHhcCcC
Q 025121 228 EGLGHYTVP------KEMDEVCNWLTARLGLE 253 (257)
Q Consensus 228 ~g~~H~~~~------~~~~~~~~~l~~~l~~~ 253 (257)
+++||.+.. +....+.+||.+.++..
T Consensus 689 ~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 720 (741)
T 1yr2_A 689 TRAGHGSGKPIDKQIEETADVQAFLAHFTGLT 720 (741)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHHHcCCC
Confidence 999998753 34678999999988654
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=99.85 E-value=7.1e-21 Score=146.75 Aligned_cols=187 Identities=14% Similarity=0.129 Sum_probs=127.6
Q ss_pred CCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025121 31 GKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
....++||++||++++...|..+.. |. .++.|+++|+||++.+. ....++.+.++++.
T Consensus 18 ~~~~~~lv~lhg~~~~~~~~~~~~~-l~-~~~~v~~~d~~G~~~~~--------------------~~~~~~~~~~~~~~ 75 (265)
T 3ils_A 18 MVARKTLFMLPDGGGSAFSYASLPR-LK-SDTAVVGLNCPYARDPE--------------------NMNCTHGAMIESFC 75 (265)
T ss_dssp TTSSEEEEEECCTTCCGGGGTTSCC-CS-SSEEEEEEECTTTTCGG--------------------GCCCCHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHh-cC-CCCEEEEEECCCCCCCC--------------------CCCCCHHHHHHHHH
Confidence 3456899999999999999999988 85 78999999999752111 01134566666666
Q ss_pred HHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh-----hh---hcc------
Q 025121 111 NLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN-----LR---NKI------ 176 (257)
Q Consensus 111 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~---~~~------ 176 (257)
+.++......+++|+||||||.+++.++.+.. ..+.++.+++++++..+.... .. ..+
T Consensus 76 ~~i~~~~~~~~~~l~GhS~Gg~ia~~~a~~l~--------~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (265)
T 3ils_A 76 NEIRRRQPRGPYHLGGWSSGGAFAYVVAEALV--------NQGEEVHSLIIIDAPIPQAMEQLPRAFYEHCNSIGLFATQ 147 (265)
T ss_dssp HHHHHHCSSCCEEEEEETHHHHHHHHHHHHHH--------HTTCCEEEEEEESCCSSCCCCCCCHHHHHHHHHTTTTTTS
T ss_pred HHHHHhCCCCCEEEEEECHhHHHHHHHHHHHH--------hCCCCceEEEEEcCCCCCcccccCHHHHHHHHHHHHhCCC
Confidence 66665443348999999999999999997421 115568888888765432100 00 000
Q ss_pred -----------ccc---------------hHHHhhhcCCCEE-EEccCC---CCcc--------------cchhhHHHHH
Q 025121 177 -----------EGS---------------HEAARRAASLPIL-LTHGLC---DDVV--------------PYKYGEKSAN 212 (257)
Q Consensus 177 -----------~~~---------------~~~~~~~~~~P~l-~~~G~~---D~~v--------------~~~~~~~~~~ 212 (257)
... .......+++|++ +++|++ |..+ +.+....+.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~ 227 (265)
T 3ils_A 148 PGASPDGSTEPPSYLIPHFTAVVDVMLDYKLAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDT 227 (265)
T ss_dssp SSSCSSSCSCCCTTHHHHHHHHHHHTTTCCCCCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHH
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHhcCCCCCccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcchHHH
Confidence 000 0001124678988 999999 9988 3444455555
Q ss_pred HhhhcCceeeEEEEecCCCCccC--HHHHHHHHHHHHHhc
Q 025121 213 CLSISGFRHLTFKSFEGLGHYTV--PKEMDEVCNWLTARL 250 (257)
Q Consensus 213 ~l~~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~~~l 250 (257)
..... ++++++++|+||+.+ .+..+.+.+.|.+++
T Consensus 228 ~~~~~---~~~~~~i~gagH~~~~~~e~~~~v~~~i~~fL 264 (265)
T 3ils_A 228 IMPGA---SFDIVRADGANHFTLMQKEHVSIISDLIDRVM 264 (265)
T ss_dssp HSTTC---CEEEEEEEEEETTGGGSTTTTHHHHHHHHHHT
T ss_pred hCCcc---ceeEEEcCCCCcceeeChhhHHHHHHHHHHHh
Confidence 44322 679999999999998 888888888888776
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=3.1e-20 Score=161.46 Aligned_cols=214 Identities=17% Similarity=0.039 Sum_probs=139.6
Q ss_pred CCCCCceEEeCCC---CCCceEEEEEccCCCCcc--chHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCC
Q 025121 18 TFEFGRTHVVRPK---GKHQATIVWLHGLGDNGS--SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELS 92 (257)
Q Consensus 18 ~~~~~~~~~~~~~---~~~~~~vi~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~ 92 (257)
+..++..++.++. +.+.|+||++||..+... .|......|+.+||.|+++|.||.|.. ...|+..+..
T Consensus 435 g~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~------g~~~~~~~~~- 507 (693)
T 3iuj_A 435 GTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRGGGEY------GQAWHLAGTQ- 507 (693)
T ss_dssp SCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEEECCTTSSTT------CHHHHHTTSG-
T ss_pred CcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEEEeCCCCCcc------CHHHHHhhhh-
Confidence 3444445554442 346799999999765433 355555666668999999999875421 1234332111
Q ss_pred CCCCCchhhHHHHHHHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh
Q 025121 93 DDGPEDWEGLDASAAHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN 171 (257)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 171 (257)
......+.+.+..+..++++. ...++++|+|+|+||++++.++.+. |+.++++|+.+|++.....
T Consensus 508 ---~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~-----------p~~~~a~v~~~~~~d~~~~ 573 (693)
T 3iuj_A 508 ---QNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQR-----------PDLMRVALPAVGVLDMLRY 573 (693)
T ss_dssp ---GGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHC-----------TTSCSEEEEESCCCCTTTG
T ss_pred ---hcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhC-----------ccceeEEEecCCcchhhhh
Confidence 111234555555555555543 3346999999999999999999864 8899999999987654321
Q ss_pred hhh--------cc--------------ccchHHHhhh-cCCC-EEEEccCCCCcccchhhHHHHHHhhhcC---ceeeEE
Q 025121 172 LRN--------KI--------------EGSHEAARRA-ASLP-ILLTHGLCDDVVPYKYGEKSANCLSISG---FRHLTF 224 (257)
Q Consensus 172 ~~~--------~~--------------~~~~~~~~~~-~~~P-~l~~~G~~D~~v~~~~~~~~~~~l~~~~---~~~~~~ 224 (257)
... .+ ...+...... ++.| +|+++|++|..|++..+.++++++++.+ . ++++
T Consensus 574 ~~~~~~~~~~~~~g~p~~~~~~~~~~~~~sp~~~~~~~~~~Pp~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~-~~~~ 652 (693)
T 3iuj_A 574 HTFTAGTGWAYDYGTSADSEAMFDYLKGYSPLHNVRPGVSYPSTMVTTADHDDRVVPAHSFKFAATLQADNAGPH-PQLI 652 (693)
T ss_dssp GGSGGGGGCHHHHCCTTSCHHHHHHHHHHCHHHHCCTTCCCCEEEEEEESSCSSSCTHHHHHHHHHHHHHCCSSS-CEEE
T ss_pred ccCCCchhHHHHcCCccCHHHHHHHHHhcCHHHhhcccCCCCceeEEecCCCCCCChhHHHHHHHHHHhhCCCCC-CEEE
Confidence 110 00 0011122333 5777 9999999999999999999999999873 4 7899
Q ss_pred EEecCCCCccCH------HHHHHHHHHHHHhcCcC
Q 025121 225 KSFEGLGHYTVP------KEMDEVCNWLTARLGLE 253 (257)
Q Consensus 225 ~~~~g~~H~~~~------~~~~~~~~~l~~~l~~~ 253 (257)
++++++||.+.. +....+.+||.+.++..
T Consensus 653 ~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 687 (693)
T 3iuj_A 653 RIETNAGHGAGTPVAKLIEQSADIYAFTLYEMGYR 687 (693)
T ss_dssp EEEC-------CHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEeCCCCCCCcccHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999998763 34578899999988765
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.8e-20 Score=163.01 Aligned_cols=214 Identities=14% Similarity=0.016 Sum_probs=141.6
Q ss_pred CCCCCceEEeCCC---CCCceEEEEEccCCCCcc--chHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCC
Q 025121 18 TFEFGRTHVVRPK---GKHQATIVWLHGLGDNGS--SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELS 92 (257)
Q Consensus 18 ~~~~~~~~~~~~~---~~~~~~vi~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~ 92 (257)
+..+...++.++. +.+.|+||++||..+... .|......|+.+||.|+++|.||+|... ..|...+.
T Consensus 427 g~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g------~~~~~~~~-- 498 (695)
T 2bkl_A 427 GTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEYG------KAWHDAGR-- 498 (695)
T ss_dssp SCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTTC------HHHHHTTS--
T ss_pred CCEEEEEEEECCCCCCCCCccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCcC------HHHHHhhH--
Confidence 3344445544443 346789999999665544 4555555555689999999999764211 23332211
Q ss_pred CCCCCchhhHHHHHHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh
Q 025121 93 DDGPEDWEGLDASAAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN 171 (257)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 171 (257)
.......+.+.+..+..++++.. ..++++|+|+|+||++++.++.+. |+.++++++.+|+......
T Consensus 499 --~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~-----------p~~~~~~v~~~~~~d~~~~ 565 (695)
T 2bkl_A 499 --LDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQR-----------PELYGAVVCAVPLLDMVRY 565 (695)
T ss_dssp --GGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHC-----------GGGCSEEEEESCCCCTTTG
T ss_pred --hhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhC-----------CcceEEEEEcCCccchhhc
Confidence 01112334555555555555433 345999999999999999999854 8899999999987653321
Q ss_pred hh--------hcccc--c-----------hHHHhhhcC--CCEEEEccCCCCcccchhhHHHHHHhhh---cCceeeEEE
Q 025121 172 LR--------NKIEG--S-----------HEAARRAAS--LPILLTHGLCDDVVPYKYGEKSANCLSI---SGFRHLTFK 225 (257)
Q Consensus 172 ~~--------~~~~~--~-----------~~~~~~~~~--~P~l~~~G~~D~~v~~~~~~~~~~~l~~---~~~~~~~~~ 225 (257)
.. ..+.. . +......+. +|+|+++|++|..|+++.+.++++++++ .+. +++++
T Consensus 566 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~-~~~~~ 644 (695)
T 2bkl_A 566 HLFGSGRTWIPEYGTAEKPEDFKTLHAYSPYHHVRPDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGNPA-TALLR 644 (695)
T ss_dssp GGSTTGGGGHHHHCCTTSHHHHHHHHHHCGGGCCCSSCCCCEEEEEEETTCSSSCTHHHHHHHHHHHTSTTCCS-CEEEE
T ss_pred cccCCCcchHHHhCCCCCHHHHHHHHhcChHhhhhhcCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhhccCCC-CEEEE
Confidence 11 00000 0 001111222 6999999999999999999999999987 444 78999
Q ss_pred EecCCCCccC------HHHHHHHHHHHHHhcCcC
Q 025121 226 SFEGLGHYTV------PKEMDEVCNWLTARLGLE 253 (257)
Q Consensus 226 ~~~g~~H~~~------~~~~~~~~~~l~~~l~~~ 253 (257)
+++++||.+. .+....+.+||.+.++..
T Consensus 645 ~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 678 (695)
T 2bkl_A 645 IEANAGHGGADQVAKAIESSVDLYSFLFQVLDVQ 678 (695)
T ss_dssp EETTCBTTBCSCHHHHHHHHHHHHHHHHHHTTC-
T ss_pred EeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999973 235678999999988754
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=99.85 E-value=3.1e-20 Score=146.78 Aligned_cols=106 Identities=15% Similarity=0.187 Sum_probs=75.5
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCC-CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLPL-PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~-~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
...|+|||+||++++...|..++..|+. .+|+|+++|+||||.+.... ....++.+.++++.
T Consensus 36 ~~~p~lvllHG~~~~~~~w~~~~~~L~~~~~~~via~Dl~GhG~S~~~~-----------------~~~~~~~~~a~dl~ 98 (316)
T 3c5v_A 36 SEGPVLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETKVKN-----------------PEDLSAETMAKDVG 98 (316)
T ss_dssp SSSCEEEEECCTTCCGGGGHHHHHHHHTTBCCEEEEECCTTSTTCBCSC-----------------TTCCCHHHHHHHHH
T ss_pred CCCcEEEEECCCCcccccHHHHHHHHhhcCCeEEEEecCCCCCCCCCCC-----------------ccccCHHHHHHHHH
Confidence 3457899999999999999999999974 28999999999987553210 00123344455555
Q ss_pred HHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEecc
Q 025121 111 NLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG 164 (257)
Q Consensus 111 ~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 164 (257)
.+++.. ....+++|+||||||.+++.+|.+. .+|. ++++|++++
T Consensus 99 ~~l~~l~~~~~~~~~lvGhSmGG~ia~~~A~~~---------~~p~-v~~lvl~~~ 144 (316)
T 3c5v_A 99 NVVEAMYGDLPPPIMLIGHSMGGAIAVHTASSN---------LVPS-LLGLCMIDV 144 (316)
T ss_dssp HHHHHHHTTCCCCEEEEEETHHHHHHHHHHHTT---------CCTT-EEEEEEESC
T ss_pred HHHHHHhccCCCCeEEEEECHHHHHHHHHHhhc---------cCCC-cceEEEEcc
Confidence 555443 2224899999999999999999842 1244 888888754
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.6e-20 Score=163.80 Aligned_cols=214 Identities=13% Similarity=0.025 Sum_probs=143.4
Q ss_pred CCCCCceEEeCCC---CCCceEEEEEccCCCCccc--hHHHhhcCCC-CceEEEccCCCCCCcccCCCCcccccccCCCC
Q 025121 18 TFEFGRTHVVRPK---GKHQATIVWLHGLGDNGSS--WSQLLESLPL-PNIKWICPTAPTRPVAILGGFPCTAWFDVGEL 91 (257)
Q Consensus 18 ~~~~~~~~~~~~~---~~~~~~vi~~HG~~~~~~~--~~~~~~~l~~-~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~ 91 (257)
+..+...++.++. ..+.|+||++||..+.... |......|.. .||.|+++|.||+|... ..|...+..
T Consensus 447 g~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g------~~~~~~~~~ 520 (710)
T 2xdw_A 447 GTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYG------ETWHKGGIL 520 (710)
T ss_dssp SCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTH------HHHHHTTSG
T ss_pred CCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCCC------hHHHHhhhh
Confidence 3344444444443 3467899999997765543 4444445555 89999999999764211 233322110
Q ss_pred CCCCCCchhhHHHHHHHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch
Q 025121 92 SDDGPEDWEGLDASAAHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR 170 (257)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 170 (257)
......+.+.+..+..++++. ...++++++|+|+||.+++.++.+. |++++++|+.+|++....
T Consensus 521 ----~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~-----------p~~~~~~v~~~~~~d~~~ 585 (710)
T 2xdw_A 521 ----ANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQR-----------PDLFGCVIAQVGVMDMLK 585 (710)
T ss_dssp ----GGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHC-----------GGGCSEEEEESCCCCTTT
T ss_pred ----hcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhC-----------ccceeEEEEcCCcccHhh
Confidence 111234455555555555543 2346999999999999999999964 889999999988765432
Q ss_pred hhhh--------cccc-------------chHHHhh-----hcCC-CEEEEccCCCCcccchhhHHHHHHhhhc------
Q 025121 171 NLRN--------KIEG-------------SHEAARR-----AASL-PILLTHGLCDDVVPYKYGEKSANCLSIS------ 217 (257)
Q Consensus 171 ~~~~--------~~~~-------------~~~~~~~-----~~~~-P~l~~~G~~D~~v~~~~~~~~~~~l~~~------ 217 (257)
.... .+.. .+..... .++. |+|+++|++|..|++..+.++++.++..
T Consensus 586 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~ 665 (710)
T 2xdw_A 586 FHKYTIGHAWTTDYGCSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRK 665 (710)
T ss_dssp GGGSTTGGGGHHHHCCTTSHHHHHHHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTT
T ss_pred ccccCCChhHHHhCCCCCCHHHHHHHHHhCcHhhhcccccccCCCCcEEEEEeCCCCccChhHHHHHHHHHHhhhccccC
Confidence 1110 0000 0111122 4554 9999999999999999999999999876
Q ss_pred -CceeeEEEEecCCCCccCH------HHHHHHHHHHHHhcCcC
Q 025121 218 -GFRHLTFKSFEGLGHYTVP------KEMDEVCNWLTARLGLE 253 (257)
Q Consensus 218 -~~~~~~~~~~~g~~H~~~~------~~~~~~~~~l~~~l~~~ 253 (257)
+. ++++++++++||.+.. +....+.+||.+.++..
T Consensus 666 ~~~-~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 707 (710)
T 2xdw_A 666 QNN-PLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNID 707 (710)
T ss_dssp CCS-CEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCc-CEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcCCc
Confidence 65 7899999999998762 34578899999887643
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.84 E-value=9.9e-20 Score=138.14 Aligned_cols=206 Identities=15% Similarity=0.137 Sum_probs=128.0
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCce--EEEccCCCCCCcccCCCCcc----cccccCCCCCCCCCCchhhHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNI--KWICPTAPTRPVAILGGFPC----TAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~--~v~~~d~~~~g~~~~~g~~~----~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
..++|||+||++++...|..+++.|.+.|+ .|+.+|.+.+|.....|... ..+.... .............+++
T Consensus 5 ~~~pvvliHG~~~~~~~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~-f~~n~~~~~~~~~~~l 83 (249)
T 3fle_A 5 KTTATLFLHGYGGSERSETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVE-FKDNKNGNFKENAYWI 83 (249)
T ss_dssp CCEEEEEECCTTCCGGGTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEE-ESSTTCCCHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEE-cCCCCCccHHHHHHHH
Confidence 356899999999999999999999987775 68999888777654443210 0000000 0011111233344445
Q ss_pred HHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh-------------
Q 025121 107 AHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR------------- 173 (257)
Q Consensus 107 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------------- 173 (257)
..+.+.+.+.....++.++||||||.+++.++.+.+.. ...++++.+|.+++.........
T Consensus 84 ~~~i~~l~~~~~~~~~~lvGHSmGG~ia~~~~~~~~~~------~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~~~~g~ 157 (249)
T 3fle_A 84 KEVLSQLKSQFGIQQFNFVGHSMGNMSFAFYMKNYGDD------RHLPQLKKEVNIAGVYNGILNMNENVNEIIVDKQGK 157 (249)
T ss_dssp HHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHHSSC------SSSCEEEEEEEESCCTTCCTTTSSCTTTSCBCTTCC
T ss_pred HHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHCccc------ccccccceEEEeCCccCCcccccCCcchhhhcccCC
Confidence 55444443333334999999999999999999864210 00147999999986543211000
Q ss_pred -----hccccc-h-HHHhhhcCCCEEEEccC------CCCcccchhhHHHHHHhhhcCceeeEEEEecC--CCCccC---
Q 025121 174 -----NKIEGS-H-EAARRAASLPILLTHGL------CDDVVPYKYGEKSANCLSISGFRHLTFKSFEG--LGHYTV--- 235 (257)
Q Consensus 174 -----~~~~~~-~-~~~~~~~~~P~l~~~G~------~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g--~~H~~~--- 235 (257)
..+... . .......++|++.|+|+ .|..||...++.+...++.... ..+.+++.| +.|...
T Consensus 158 p~~~~~~~~~l~~~~~~~p~~~~~vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~~~-~y~e~~v~g~~a~Hs~l~~n 236 (249)
T 3fle_A 158 PSRMNAAYRQLLSLYKIYCGKEIEVLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGSTK-SYQEMKFKGAKAQHSQLHEN 236 (249)
T ss_dssp BSSCCHHHHHTGGGHHHHTTTTCEEEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTCSS-EEEEEEEESGGGSTGGGGGC
T ss_pred CcccCHHHHHHHHHHhhCCccCCeEEEEeccCCCCCCCCCcccHHHHHHHHHHHhhCCC-ceEEEEEeCCCCchhccccC
Confidence 000000 0 11112257899999998 7999999998887777775433 445566655 889876
Q ss_pred HHHHHHHHHHH
Q 025121 236 PKEMDEVCNWL 246 (257)
Q Consensus 236 ~~~~~~~~~~l 246 (257)
++..+.+.+||
T Consensus 237 ~~V~~~I~~FL 247 (249)
T 3fle_A 237 KDVANEIIQFL 247 (249)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 44566777776
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-19 Score=158.84 Aligned_cols=214 Identities=13% Similarity=0.070 Sum_probs=143.1
Q ss_pred CCCCceEEeCCC---CCCceEEEEEccCCCCcc--chHHHhhcCCCCceEEEccCCCCCCcccCCCCccccccc-CCCCC
Q 025121 19 FEFGRTHVVRPK---GKHQATIVWLHGLGDNGS--SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFD-VGELS 92 (257)
Q Consensus 19 ~~~~~~~~~~~~---~~~~~~vi~~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~-~~~~~ 92 (257)
..+...+++++. +.+.|+||++||..+... .|......|+.+||.|+++|.||+|.. ...|+. .+.
T Consensus 491 ~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~------G~~~~~~~~~-- 562 (751)
T 2xe4_A 491 TKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCDRGMIFAIAHIRGGSEL------GRAWYEIGAK-- 562 (751)
T ss_dssp CEEEEEEEEETTSCTTSCCCEEEECCCCTTCCCCCCCCGGGHHHHTTTCEEEEECCTTSCTT------CTHHHHTTSS--
T ss_pred cEEEEEEEcCCCCCCCCCccEEEEECCCCCcCCCCcchHHHHHHHhCCcEEEEEeeCCCCCc------Ccchhhcccc--
Confidence 344444444443 346789999999776554 355556667678999999999875421 123433 111
Q ss_pred CCCCCchhhHHHHHHHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh
Q 025121 93 DDGPEDWEGLDASAAHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN 171 (257)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 171 (257)
.......+.+.++.+..++++. ...++++|+|+|+||++++.++.+. |+.++++|+.+|+......
T Consensus 563 --~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~-----------p~~~~a~v~~~~~~d~~~~ 629 (751)
T 2xe4_A 563 --YLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMR-----------PDLFKVALAGVPFVDVMTT 629 (751)
T ss_dssp --GGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHC-----------GGGCSEEEEESCCCCHHHH
T ss_pred --ccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhC-----------chheeEEEEeCCcchHHhh
Confidence 0111345566666666666553 3446999999999999999999864 8899999999887643221
Q ss_pred hh-----------hcccc-------------chHHHhhhcCCC-EEEEccCCCCcccchhhHHHHHHhhhcCc--eeeEE
Q 025121 172 LR-----------NKIEG-------------SHEAARRAASLP-ILLTHGLCDDVVPYKYGEKSANCLSISGF--RHLTF 224 (257)
Q Consensus 172 ~~-----------~~~~~-------------~~~~~~~~~~~P-~l~~~G~~D~~v~~~~~~~~~~~l~~~~~--~~~~~ 224 (257)
+. ..+.. .+......+++| +|+++|++|..||++.+.++++.++..++ ..+.+
T Consensus 630 ~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~~~~~~~Pp~Lii~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~ 709 (751)
T 2xe4_A 630 MCDPSIPLTTGEWEEWGNPNEYKYYDYMLSYSPMDNVRAQEYPNIMVQCGLHDPRVAYWEPAKWVSKLRECKTDNNEILL 709 (751)
T ss_dssp HTCTTSTTHHHHTTTTCCTTSHHHHHHHHHHCTGGGCCSSCCCEEEEEEETTCSSSCTHHHHHHHHHHHHHCCSCCCEEE
T ss_pred hcccCcccchhhHHHcCCCCCHHHHHHHHhcChhhhhccCCCCceeEEeeCCCCCCCHHHHHHHHHHHHhcCCCCceEEE
Confidence 10 00000 011122345677 99999999999999999999999998754 13466
Q ss_pred EEecCCCCccCH------HHHHHHHHHHHHhcCcC
Q 025121 225 KSFEGLGHYTVP------KEMDEVCNWLTARLGLE 253 (257)
Q Consensus 225 ~~~~g~~H~~~~------~~~~~~~~~l~~~l~~~ 253 (257)
.+++++||.+.. +....+.+||.+.++..
T Consensus 710 ~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~l~~~ 744 (751)
T 2xe4_A 710 NIDMESGHFSAKDRYKFWKESAIQQAFVCKHLKST 744 (751)
T ss_dssp EEETTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EECCCCCCCCcCChhHHHHHHHHHHHHHHHHhCCC
Confidence 677999998762 23457899999988754
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.3e-19 Score=140.79 Aligned_cols=194 Identities=14% Similarity=0.095 Sum_probs=127.5
Q ss_pred eEEEEEccCC--CCccchHHHh---hcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCC--CCchhhHHH-HH
Q 025121 35 ATIVWLHGLG--DNGSSWSQLL---ESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDG--PEDWEGLDA-SA 106 (257)
Q Consensus 35 ~~vi~~HG~~--~~~~~~~~~~---~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~--~~~~~~~~~-~~ 106 (257)
++||++||.+ ++...|..+. +.+...++.|+++|.++. +||......... ......+.+ .+
T Consensus 30 ~~v~llHG~~~~~~~~~w~~~~~~~~~l~~~~~~vv~pd~~~~-----------~~~~~~~~~~~~~g~~~~~~~~~~~~ 98 (280)
T 1dqz_A 30 HAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQS-----------SFYTDWYQPSQSNGQNYTYKWETFLT 98 (280)
T ss_dssp SEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTT-----------CTTSBCSSSCTTTTCCSCCBHHHHHH
T ss_pred CEEEEECCCCCCCCcccccccCcHHHHHhcCCeEEEEECCCCC-----------ccccCCCCCCccccccccccHHHHHH
Confidence 5899999995 4777787643 446667899999996521 122110000000 000112222 23
Q ss_pred HHHHHHhcc-C-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhh----h-------
Q 025121 107 AHIANLLST-E-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL----R------- 173 (257)
Q Consensus 107 ~~~~~~~~~-~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----~------- 173 (257)
+.+..++++ . ...++++|+||||||.+|+.++.++ |+.++++++++|.+...... .
T Consensus 99 ~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~-----------p~~~~~~v~~sg~~~~~~~~~~~~~~~~~~~~ 167 (280)
T 1dqz_A 99 REMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYY-----------PQQFPYAASLSGFLNPSESWWPTLIGLAMNDS 167 (280)
T ss_dssp THHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHC-----------TTTCSEEEEESCCCCTTSTTHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhC-----------CchheEEEEecCcccccCcchhhhHHHHhhhc
Confidence 455555544 2 2224899999999999999999964 89999999999987543210 0
Q ss_pred ---------------hccccchH-HHhhh--cCCCEEEEccCCCC--------------cccchhhHHHHHHhhhcC-ce
Q 025121 174 ---------------NKIEGSHE-AARRA--ASLPILLTHGLCDD--------------VVPYKYGEKSANCLSISG-FR 220 (257)
Q Consensus 174 ---------------~~~~~~~~-~~~~~--~~~P~l~~~G~~D~--------------~v~~~~~~~~~~~l~~~~-~~ 220 (257)
......+. ..... ..+|+++.+|+.|. .++.+.++++.+.+++.+ +
T Consensus 168 ~~~~~~~~~g~~~~~~~~~~~p~~~~~~l~~~~~~~~l~~G~~D~~~~~~~~~~~~~~e~~~~~~~~~~~~~L~~~g~~- 246 (280)
T 1dqz_A 168 GGYNANSMWGPSSDPAWKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPAKFLEGLTLRTNQTFRDTYAADGGR- 246 (280)
T ss_dssp TSCCHHHHHCSTTSHHHHHTCTTTTHHHHHHHTCEEEEECCCSCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCC-
T ss_pred cCcCHHHhcCCCCchhhhhcCHHHHHHHHHhcCCeEEEEeCCCCcccccccccchhhHHHHHHHHHHHHHHHHHhCCCC-
Confidence 00000000 01111 36899999999997 578888999999999998 7
Q ss_pred eeEEEEecCCCCccC--HHHHHHHHHHHHHhcC
Q 025121 221 HLTFKSFEGLGHYTV--PKEMDEVCNWLTARLG 251 (257)
Q Consensus 221 ~~~~~~~~g~~H~~~--~~~~~~~~~~l~~~l~ 251 (257)
++++.++++++|... .+.+..++.||.+.|+
T Consensus 247 ~~~~~~~~~g~H~~~~w~~~l~~~l~~l~~~l~ 279 (280)
T 1dqz_A 247 NGVFNFPPNGTHSWPYWNEQLVAMKADIQHVLN 279 (280)
T ss_dssp SEEEECCSCCCSSHHHHHHHHHHTHHHHHHHHH
T ss_pred ceEEEecCCCccChHHHHHHHHHHHHHHHHHhC
Confidence 789999888899864 6677888888877653
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.3e-20 Score=151.07 Aligned_cols=114 Identities=13% Similarity=0.163 Sum_probs=74.3
Q ss_pred CCceEEEEEccCCCCccchH----------------HHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCC
Q 025121 32 KHQATIVWLHGLGDNGSSWS----------------QLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDG 95 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~----------------~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~ 95 (257)
...|+||++||++++...|. .+++.|+..||.|+++|+||+|.+...... .+ +.. .
T Consensus 48 ~~~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~--~~---~~~---~ 119 (354)
T 2rau_A 48 GGNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDR--QL---SFT---A 119 (354)
T ss_dssp CCEEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGG--GG---GGG---T
T ss_pred CCCCEEEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCccccc--cc---ccc---c
Confidence 45689999999999988555 778888778999999999987654321110 00 000 0
Q ss_pred CCchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCc-ccccceEEEecc
Q 025121 96 PEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPY-YVNLRAVVGLSG 164 (257)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~ 164 (257)
........+++..+.+.+.......+++++||||||.+++.++.+ + +++++++|++++
T Consensus 120 ~~~~~~~~~d~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~-----------~~p~~v~~lvl~~~ 178 (354)
T 2rau_A 120 NWGWSTWISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSL-----------YWKNDIKGLILLDG 178 (354)
T ss_dssp TCSHHHHHHHHHHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHH-----------HHHHHEEEEEEESC
T ss_pred CCcHHHHHHHHHHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHh-----------cCccccceEEEecc
Confidence 111233333333333333222223489999999999999999984 4 678899988854
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=6.4e-20 Score=148.76 Aligned_cols=197 Identities=15% Similarity=0.168 Sum_probs=125.4
Q ss_pred CCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCC--------CCcccccccCCCCCCCCC--Cchh
Q 025121 31 GKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILG--------GFPCTAWFDVGELSDDGP--EDWE 100 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~--------g~~~~~w~~~~~~~~~~~--~~~~ 100 (257)
+.+.|+|||+||++++...|..+++.|+.+||.|+++|+++++.+... +.+...|+.......... ....
T Consensus 95 ~~~~P~Vv~~HG~~~~~~~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 174 (383)
T 3d59_A 95 GEKYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIRNE 174 (383)
T ss_dssp SSCEEEEEEECCTTCCTTTTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHHHHHH
T ss_pred CCCCCEEEEcCCCCCCchHHHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchhhhHH
Confidence 346799999999999999999999999989999999999977543210 000123332211100000 0001
Q ss_pred hH---HHHHHHHHHHhcc----------------------CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccc
Q 025121 101 GL---DASAAHIANLLST----------------------EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVN 155 (257)
Q Consensus 101 ~~---~~~~~~~~~~~~~----------------------~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~ 155 (257)
.+ .+++..+.+.+.. ..+.++|+++|||+||.+++.++.+ .++
T Consensus 175 ~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~------------~~~ 242 (383)
T 3d59_A 175 QVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSE------------DQR 242 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHH------------CTT
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhh------------CCC
Confidence 11 1122222222211 1122589999999999999999875 457
Q ss_pred cceEEEeccCCCCchhhhhccccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC
Q 025121 156 LRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV 235 (257)
Q Consensus 156 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 235 (257)
++++|+++++..... ......+++|+|+++|++|..++ ..+. .+.+.+.+. +.++++++|++|...
T Consensus 243 v~a~v~~~~~~~p~~----------~~~~~~i~~P~Lii~g~~D~~~~--~~~~-~~~l~~~~~-~~~~~~~~g~~H~~~ 308 (383)
T 3d59_A 243 FRCGIALDAWMFPLG----------DEVYSRIPQPLFFINSEYFQYPA--NIIK-MKKCYSPDK-ERKMITIRGSVHQNF 308 (383)
T ss_dssp CCEEEEESCCCTTCC----------GGGGGSCCSCEEEEEETTTCCHH--HHHH-HHTTCCTTS-CEEEEEETTCCGGGG
T ss_pred ccEEEEeCCccCCCc----------hhhhccCCCCEEEEecccccchh--hHHH-HHHHHhcCC-ceEEEEeCCCcCCCc
Confidence 999999998763211 01124568999999999998643 2233 355554444 789999999999862
Q ss_pred ----------------------H----HHH-HHHHHHHHHhcCcC
Q 025121 236 ----------------------P----KEM-DEVCNWLTARLGLE 253 (257)
Q Consensus 236 ----------------------~----~~~-~~~~~~l~~~l~~~ 253 (257)
+ +.. +.+++||++.|...
T Consensus 309 ~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Fl~~~L~~~ 353 (383)
T 3d59_A 309 ADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKASLAFLQKHLGLH 353 (383)
T ss_dssp SGGGGSSCHHHHHHTTSSCSSCHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred ccHhhhhhHHhhhhhcccCCcCHHHHHHHHHHHHHHHHHHHcCCc
Confidence 1 122 36889999988654
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.82 E-value=5.3e-19 Score=143.26 Aligned_cols=108 Identities=15% Similarity=0.079 Sum_probs=83.2
Q ss_pred CCCCCCceEEEEEccCCCCccchHHHhhcCCCC---------ceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCc
Q 025121 28 RPKGKHQATIVWLHGLGDNGSSWSQLLESLPLP---------NIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPED 98 (257)
Q Consensus 28 ~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~---------g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~ 98 (257)
.+.++..++|||+||++++...|..++..|... +|.|+++|+||+|.+..... .
T Consensus 86 ~~~~~~~~plll~HG~~~s~~~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S~~~~~-----------------~ 148 (388)
T 4i19_A 86 RSPEPDATPMVITHGWPGTPVEFLDIIGPLTDPRAHGGDPADAFHLVIPSLPGFGLSGPLKS-----------------A 148 (388)
T ss_dssp CCSSTTCEEEEEECCTTCCGGGGHHHHHHHHCGGGGTSCGGGCEEEEEECCTTSGGGCCCSS-----------------C
T ss_pred cCCCCCCCeEEEECCCCCCHHHHHHHHHHHhCcccccCCCCCCeEEEEEcCCCCCCCCCCCC-----------------C
Confidence 344455689999999999999999999999854 99999999998875432210 0
Q ss_pred hhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEecc
Q 025121 99 WEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG 164 (257)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 164 (257)
..++.+.++.+.++++..... +++++||||||.+++.++.+. |+++.+++++++
T Consensus 149 ~~~~~~~a~~~~~l~~~lg~~-~~~l~G~S~Gg~ia~~~a~~~-----------p~~v~~lvl~~~ 202 (388)
T 4i19_A 149 GWELGRIAMAWSKLMASLGYE-RYIAQGGDIGAFTSLLLGAID-----------PSHLAGIHVNLL 202 (388)
T ss_dssp CCCHHHHHHHHHHHHHHTTCS-SEEEEESTHHHHHHHHHHHHC-----------GGGEEEEEESSC
T ss_pred CCCHHHHHHHHHHHHHHcCCC-cEEEEeccHHHHHHHHHHHhC-----------hhhceEEEEecC
Confidence 123455566666666654433 899999999999999999964 889999998875
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-19 Score=136.95 Aligned_cols=208 Identities=12% Similarity=0.068 Sum_probs=123.4
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCc---eEEEccCCCCCCcccCCCCc----ccccccCCCCCCCCCC---chhhHH
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPN---IKWICPTAPTRPVAILGGFP----CTAWFDVGELSDDGPE---DWEGLD 103 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g---~~v~~~d~~~~g~~~~~g~~----~~~w~~~~~~~~~~~~---~~~~~~ 103 (257)
.++|||+||++++...|..+++.|.+.+ +.|+.+|.+.+|.....|.. ...+..... .. ... +.....
T Consensus 4 ~~pvv~iHG~~~~~~~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f-~~-n~~~~~~~~~~a 81 (250)
T 3lp5_A 4 MAPVIMVPGSSASQNRFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGF-AN-NRDGKANIDKQA 81 (250)
T ss_dssp CCCEEEECCCGGGHHHHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEE-SC-CCCSHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEe-cc-CCCcccCHHHHH
Confidence 4579999999999999999999998654 78888887777754332210 000000000 00 011 122233
Q ss_pred HHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhc----cccc
Q 025121 104 ASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNK----IEGS 179 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~----~~~~ 179 (257)
+++..+.+.+.+.....++.++||||||.++..++.+.... ..++++.++|++++........... +...
T Consensus 82 ~~l~~~~~~l~~~~~~~~~~lvGHSmGg~~a~~~~~~~~~~------~~~~~v~~lv~l~~p~~g~~~~~~~~~~~~~~l 155 (250)
T 3lp5_A 82 VWLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKE------SPKVHIDRLMTIASPYNMESTSTTAKTSMFKEL 155 (250)
T ss_dssp HHHHHHHHHHHTTSCCSEEEEEEETHHHHHHHHHHHHTGGG------STTCEEEEEEEESCCTTTTCCCSSCCCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHHcccc------ccchhhCEEEEECCCCCcccccccccCHHHHHH
Confidence 44444444443333445999999999999999998854110 0156899999998765433211000 0000
Q ss_pred hH-HHhhhcCCCEEEEccC----CCCcccchhhHHHHHHhhhcCceeeEEEEec--CCCCccCHHHHHHHHHHHHHhcC
Q 025121 180 HE-AARRAASLPILLTHGL----CDDVVPYKYGEKSANCLSISGFRHLTFKSFE--GLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 180 ~~-~~~~~~~~P~l~~~G~----~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~--g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
.. ......++|+++|+|+ .|.+||.+.++.+...++.... ..+.+.+. +++|..+.+.. .+.+.+.++|.
T Consensus 156 ~~~~~~lp~~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~~~-~~~~~~v~g~~a~H~~l~e~~-~v~~~I~~FL~ 232 (250)
T 3lp5_A 156 YRYRTGLPESLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVK-HFTEITVTGANTAHSDLPQNK-QIVSLIRQYLL 232 (250)
T ss_dssp HHTGGGSCTTCEEEEEECCCCCCTTTBCCHHHHTTHHHHHTTTSS-EEEEEECTTTTBSSCCHHHHH-HHHHHHHHHTS
T ss_pred HhccccCCCCceEEEEEecCCCCCCceeeHHHHHHHHHHhccccc-ceEEEEEeCCCCchhcchhCH-HHHHHHHHHHh
Confidence 00 0111137999999999 9999999998888877764322 33334444 46799885543 44444444443
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.81 E-value=6.6e-19 Score=136.78 Aligned_cols=190 Identities=14% Similarity=0.101 Sum_probs=126.5
Q ss_pred eEEEEEccCC--CCccchHH---HhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 35 ATIVWLHGLG--DNGSSWSQ---LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 35 ~~vi~~HG~~--~~~~~~~~---~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
|+||++||.+ ++...|.. +.+.++..++.|+++|.++. +||..... ....... ...++++
T Consensus 35 p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~pd~~~~-----------~~~~~~~~--~~~~~~~--~~~~~~l 99 (280)
T 1r88_A 35 HAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAY-----------SMYTNWEQ--DGSKQWD--TFLSAEL 99 (280)
T ss_dssp SEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTT-----------STTSBCSS--CTTCBHH--HHHHTHH
T ss_pred CEEEEECCCCCCCChhhhhhcccHHHHHhcCCeEEEEECCCCC-----------CccCCCCC--CCCCcHH--HHHHHHH
Confidence 7999999995 46666765 44666778999999997421 12211000 0001121 2223455
Q ss_pred HHHhcc-CC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh--------------
Q 025121 110 ANLLST-EP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR-------------- 173 (257)
Q Consensus 110 ~~~~~~-~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-------------- 173 (257)
..+++. .. ..++++|+|+||||++|+.++.+. |++++++++++|.+.......
T Consensus 100 ~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~-----------p~~~~~~v~~sg~~~~~~~~~~~~~~~~~~~~~~~ 168 (280)
T 1r88_A 100 PDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFH-----------PDRFGFAGSMSGFLYPSNTTTNGAIAAGMQQFGGV 168 (280)
T ss_dssp HHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHC-----------TTTEEEEEEESCCCCTTSHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhC-----------ccceeEEEEECCccCcCCccchhhHHHHhhhcccc
Confidence 555544 22 235999999999999999999964 899999999999875432110
Q ss_pred ------------hccccchHHHh-hh--cCCCEEEEc----cCCCCc-------ccchhhHHHHHHhhhcC-ceeeEEEE
Q 025121 174 ------------NKIEGSHEAAR-RA--ASLPILLTH----GLCDDV-------VPYKYGEKSANCLSISG-FRHLTFKS 226 (257)
Q Consensus 174 ------------~~~~~~~~~~~-~~--~~~P~l~~~----G~~D~~-------v~~~~~~~~~~~l~~~~-~~~~~~~~ 226 (257)
......+.... .. ...|+++.+ |+.|.. ++.+.++++.+.+++.+ + ++++.+
T Consensus 169 ~~~~~~g~~~~~~~~~~~p~~~~~~~~~~~~pv~i~~~~~~G~~D~~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~~~~ 247 (280)
T 1r88_A 169 DTNGMWGAPQLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEAMGNSRMFYNQYRSVGGH-NGHFDF 247 (280)
T ss_dssp CTHHHHCCGGGSTTGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHHHHHHHHHHHHHHHTTCC-SEEEEC
T ss_pred chhhhcCCCchhhhHhcCHHHHHHhhhccCCeEEEEeccCCCCCCcccccchhHHHHHHHHHHHHHHHHCCCc-ceEEEe
Confidence 00000011111 11 368999999 999983 58889999999999988 7 789999
Q ss_pred ecCCCCccC--HHHHHHHHHHHHHhcC
Q 025121 227 FEGLGHYTV--PKEMDEVCNWLTARLG 251 (257)
Q Consensus 227 ~~g~~H~~~--~~~~~~~~~~l~~~l~ 251 (257)
+++++|.+. ...+...+.|+.+.+.
T Consensus 248 ~~~g~H~~~~w~~~l~~~l~~~~~~~~ 274 (280)
T 1r88_A 248 PASGDNGWGSWAPQLGAMSGDIVGAIR 274 (280)
T ss_dssp CSSCCSSHHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCcChhHHHHHHHHHHHHHHHHHh
Confidence 877899865 5567778888877654
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=99.80 E-value=3.6e-20 Score=145.37 Aligned_cols=183 Identities=19% Similarity=0.173 Sum_probs=115.5
Q ss_pred CCCCceEEEEEccCCCCc--cchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025121 30 KGKHQATIVWLHGLGDNG--SSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 30 ~~~~~~~vi~~HG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
.+...++|||+||++++. ..|..+...|. .++.|+++|+||+|.+.. . ..++.+.++
T Consensus 63 ~~~~~~~lvllhG~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~-----------------~---~~~~~~~a~ 121 (300)
T 1kez_A 63 DGPGEVTVICCAGTAAISGPHEFTRLAGALR-GIAPVRAVPQPGYEEGEP-----------------L---PSSMAAVAA 121 (300)
T ss_dssp CCSCSSEEEECCCSSTTCSTTTTHHHHHHTS-SSCCBCCCCCTTSSTTCC-----------------B---CSSHHHHHH
T ss_pred CCCCCCeEEEECCCcccCcHHHHHHHHHhcC-CCceEEEecCCCCCCCCC-----------------C---CCCHHHHHH
Confidence 344568999999999987 88999999997 569999999997654210 0 123445555
Q ss_pred HHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-hhhh--------cccc
Q 025121 108 HIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR-NLRN--------KIEG 178 (257)
Q Consensus 108 ~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~--------~~~~ 178 (257)
++.+.+.......+++|+||||||.+++.++.+.+. ...+++++++++++.+... .+.. .+..
T Consensus 122 ~~~~~l~~~~~~~~~~LvGhS~GG~vA~~~A~~~p~--------~g~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (300)
T 1kez_A 122 VQADAVIRTQGDKPFVVAGHSAGALMAYALATELLD--------RGHPPRGVVLIDVYPPGHQDAMNAWLEELTATLFDR 193 (300)
T ss_dssp HHHHHHHHHCSSCCEEEECCTHHHHHHHHHHHHTTT--------TTCCCSEEECBTCCCTTTCHHHHHHHHHHHGGGCCC
T ss_pred HHHHHHHHhcCCCCEEEEEECHhHHHHHHHHHHHHh--------cCCCccEEEEECCCCCcchhHHHHHHHHHHHHHHhC
Confidence 555333222223489999999999999999986410 1258999999988765432 1000 0000
Q ss_pred ------------ch-------HHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCH-HH
Q 025121 179 ------------SH-------EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVP-KE 238 (257)
Q Consensus 179 ------------~~-------~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~-~~ 238 (257)
.. ......+++|+++++|+ |..+++.. ..+.+.+. .+.++++++| ||..+. +.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~-d~~~~~~~-~~~~~~~~----~~~~~~~i~g-gH~~~~~e~ 266 (300)
T 1kez_A 194 ETVRMDDTRLTALGAYDRLTGQWRPRETGLPTLLVSAG-EPMGPWPD-DSWKPTWP----FEHDTVAVPG-DHFTMVQEH 266 (300)
T ss_dssp CSSCCCHHHHHHHHHHHHHTTTCCCCCCSCCBEEEEES-SCSSCCCS-SCCSCCCS----SCCEEEEESS-CTTTSSSSC
T ss_pred cCCccchHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeC-CCCCCCcc-cchhhhcC----CCCeEEEecC-CChhhcccc
Confidence 00 00124568999999995 55555544 22222111 1468999999 998763 44
Q ss_pred H----HHHHHHHHH
Q 025121 239 M----DEVCNWLTA 248 (257)
Q Consensus 239 ~----~~~~~~l~~ 248 (257)
. +.+.+||.+
T Consensus 267 ~~~~~~~i~~fl~~ 280 (300)
T 1kez_A 267 ADAIARHIDAWLGG 280 (300)
T ss_dssp SHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHh
Confidence 4 445555544
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.8e-19 Score=138.00 Aligned_cols=210 Identities=17% Similarity=0.100 Sum_probs=120.1
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCce---EEEccCCCCCCcccCCCCcc-cccccC--CCCCCCCCCchhhHHHHHH
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNI---KWICPTAPTRPVAILGGFPC-TAWFDV--GELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~---~v~~~d~~~~g~~~~~g~~~-~~w~~~--~~~~~~~~~~~~~~~~~~~ 107 (257)
.++|||+||++++...|..+++.|++.++ .++.++...+|.-...|... ..++.. -... ..........+++.
T Consensus 3 ~~pvvllHG~~~~~~~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~-~~~~~~~~~a~~l~ 81 (254)
T 3ds8_A 3 QIPIILIHGSGGNASSLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFE-QNQATPDDWSKWLK 81 (254)
T ss_dssp CCCEEEECCTTCCTTTTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEES-STTSCHHHHHHHHH
T ss_pred CCCEEEECCCCCCcchHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEec-CCCCCHHHHHHHHH
Confidence 35799999999999999999998875443 34444433332211111100 000000 0000 01122333333333
Q ss_pred HHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhc-------ccc-c
Q 025121 108 HIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNK-------IEG-S 179 (257)
Q Consensus 108 ~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-------~~~-~ 179 (257)
.+.+.+.......++.++||||||.+++.++.+.+.. ...+++.++|++++........... ... .
T Consensus 82 ~~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~------~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~~~p~~~ 155 (254)
T 3ds8_A 82 IAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGD------KTVPTLRKLVAIGSPFNDLDPNDNGMDLSFKKLPNST 155 (254)
T ss_dssp HHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTC------TTSCEEEEEEEESCCTTCSCHHHHCSCTTCSSCSSCC
T ss_pred HHHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCC------ccccceeeEEEEcCCcCcccccccccccccccCCcch
Confidence 3333332222224999999999999999999965110 0012799999998865433221100 000 0
Q ss_pred h-------HHHhhhcCCCEEEEccC------CCCcccchhhHHHHHHhhhcCceeeEEEEecC--CCCccC---HHHHHH
Q 025121 180 H-------EAARRAASLPILLTHGL------CDDVVPYKYGEKSANCLSISGFRHLTFKSFEG--LGHYTV---PKEMDE 241 (257)
Q Consensus 180 ~-------~~~~~~~~~P~l~~~G~------~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g--~~H~~~---~~~~~~ 241 (257)
. .......++|++.|+|+ .|.+||.+.++.+...++.... ..+.+++.| ++|... ++..+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~~~-~~~~~~~~g~~a~Hs~l~~~~~v~~~ 234 (254)
T 3ds8_A 156 PQMDYFIKNQTEVSPDLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGSAK-AYIEDIQVGEDAVHQTLHETPKSIEK 234 (254)
T ss_dssp HHHHHHHHTGGGSCTTCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTTBS-EEEEEEEESGGGCGGGGGGSHHHHHH
T ss_pred HHHHHHHHHHhhCCCCcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHhhccCc-ceEEEEEeCCCCchhcccCCHHHHHH
Confidence 0 00111237899999999 9999999998888777765322 345556655 679865 556778
Q ss_pred HHHHHHHhcC
Q 025121 242 VCNWLTARLG 251 (257)
Q Consensus 242 ~~~~l~~~l~ 251 (257)
+..||.+...
T Consensus 235 i~~fL~~~~~ 244 (254)
T 3ds8_A 235 TYWFLEKFKT 244 (254)
T ss_dssp HHHHHHTCCC
T ss_pred HHHHHHHhcC
Confidence 8888887644
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.1e-18 Score=135.95 Aligned_cols=205 Identities=14% Similarity=0.018 Sum_probs=128.8
Q ss_pred CCceEEEEEccCCCCccc--------hHHHhhcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhH
Q 025121 32 KHQATIVWLHGLGDNGSS--------WSQLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGL 102 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~--------~~~~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 102 (257)
.+.|+|++.||....... -..++..|+ .+||.|+++|++|+|.+.... .. |. ........+
T Consensus 72 ~~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~rG~G~s~~~~---~~-~~------~~~~~~~~~ 141 (377)
T 4ezi_A 72 GQVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYLGLGDNELTL---HP-YV------QAETLASSS 141 (377)
T ss_dssp SCEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEEECCTTSTTCCCSS---CC-TT------CHHHHHHHH
T ss_pred CCCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEEeCCCCCCCCCCCC---cc-cc------cchhHHHHH
Confidence 578999999998743221 112445566 799999999999876433100 00 00 000112334
Q ss_pred HHHHHHHHHHhccCC--CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh---------
Q 025121 103 DASAAHIANLLSTEP--ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN--------- 171 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--------- 171 (257)
.+.+.++..+++... ...+++++||||||.+++.++...+.... ...+.+++..++.......
T Consensus 142 ~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~------~l~l~g~~~~~~p~dl~~~~~~~~~~~~ 215 (377)
T 4ezi_A 142 IDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYP------DLPVSAVAPGSAPYGWEETMHFVMLEPG 215 (377)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCT------TSCCCEEEEESCCCCHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCC------CCceEEEEecCcccCHHHHHHHHhcCCC
Confidence 445555555555432 23599999999999999999886421000 1135555555442110000
Q ss_pred --------------------------------------------------------hhhccc----------cchHH---
Q 025121 172 --------------------------------------------------------LRNKIE----------GSHEA--- 182 (257)
Q Consensus 172 --------------------------------------------------------~~~~~~----------~~~~~--- 182 (257)
....+. ..+..
T Consensus 216 ~~~~~~~g~~~~~~~g~~~~yp~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 295 (377)
T 4ezi_A 216 PRATAYLAYFFYSLQTYKSYWSGFDEIFAPPYNTLIPELMDGYHAVDEILQALPQDPLLIFQPKFSNGIISKTDRNTEIL 295 (377)
T ss_dssp TTHHHHHHHHHHHHHHHHCCSSCHHHHBCTTHHHHHHHHTSSCSCHHHHHHHSCSSGGGGBCHHHHHHHHTTCSTTHHHH
T ss_pred cccchhHHHHHHHHHHHHHhccCHHHHhCHHHHHHHHHHhhcccchhhhhhccCCCHHHHhchhhhhhcccccchHHHHH
Confidence 000000 00000
Q ss_pred ------HhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecC--CCCccC-HHHHHHHHHHHHHhcCcC
Q 025121 183 ------ARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEG--LGHYTV-PKEMDEVCNWLTARLGLE 253 (257)
Q Consensus 183 ------~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g--~~H~~~-~~~~~~~~~~l~~~l~~~ 253 (257)
....+++|++++||++|.+||++.++++++.+++.|. ++++.+++ .+|... ......+.+||.+.+..+
T Consensus 296 l~~~~~~~~~~~~Pvli~hG~~D~~Vp~~~~~~l~~~l~~~G~--v~~~~~~~~~~~H~~~~~~~~~~~~~wl~~~~~~~ 373 (377)
T 4ezi_A 296 KINFNHYDFKPTAPLLLVGTKGDRDVPYAGAEMAYHSFRKYSD--FVWIKSVSDALDHVQAHPFVLKEQVDFFKQFERQE 373 (377)
T ss_dssp HHHHCCCCSCCSSCEEEEECTTCSSSCHHHHHHHHHHHHTTCS--CEEEEESCSSCCTTTTHHHHHHHHHHHHHHHHTSS
T ss_pred HHHhcccCCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhcCC--EEEEEcCCCCCCccChHHHHHHHHHHHHHHhhcch
Confidence 0123578999999999999999999999999998764 89999999 899876 556789999999988754
Q ss_pred C
Q 025121 254 G 254 (257)
Q Consensus 254 ~ 254 (257)
.
T Consensus 374 ~ 374 (377)
T 4ezi_A 374 A 374 (377)
T ss_dssp C
T ss_pred h
Confidence 3
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-18 Score=142.05 Aligned_cols=98 Identities=11% Similarity=0.061 Sum_probs=66.8
Q ss_pred CCceEEEEEccCCCCccc-----------hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchh
Q 025121 32 KHQATIVWLHGLGDNGSS-----------WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWE 100 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~-----------~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~ 100 (257)
.+.|+||++||++++... |..++..|..+||.|+++|+||+|.+..... .+.. ......
T Consensus 77 ~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~~---~~~~-------~~~~~~ 146 (397)
T 3h2g_A 77 GPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYAYH---PYLH-------SASEAS 146 (397)
T ss_dssp SCEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTTSTTCCCSSC---CTTC-------HHHHHH
T ss_pred CCCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEecCCCCCCCCCCcc---chhh-------hhhHHH
Confidence 467899999999987665 6678888888999999999998865421100 0000 001123
Q ss_pred hHHHHHHHHHHHhccCCC--CceEEEEEechhHHHHHHHHH
Q 025121 101 GLDASAAHIANLLSTEPA--DVKVGIGGFSMGAAVALYSAT 139 (257)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~--~~~i~l~G~S~Gg~~a~~~~~ 139 (257)
.+.+.+..+..++++... ..+++|+||||||.+++.++.
T Consensus 147 ~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~ 187 (397)
T 3h2g_A 147 ATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQR 187 (397)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHH
Confidence 445555666666554322 359999999999999998873
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.9e-18 Score=135.55 Aligned_cols=186 Identities=17% Similarity=0.159 Sum_probs=123.7
Q ss_pred CCCceEEEEEccC--CCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025121 31 GKHQATIVWLHGL--GDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 31 ~~~~~~vi~~HG~--~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
+...++|||+||+ +++...|..++..|. .+|.|+++|+||+|.+. ....++.+.+.+
T Consensus 78 ~~~~~~lv~lhG~~~~~~~~~~~~~~~~L~-~~~~v~~~d~~G~G~~~--------------------~~~~~~~~~~~~ 136 (319)
T 3lcr_A 78 GQLGPQLILVCPTVMTTGPQVYSRLAEELD-AGRRVSALVPPGFHGGQ--------------------ALPATLTVLVRS 136 (319)
T ss_dssp CCSSCEEEEECCSSTTCSGGGGHHHHHHHC-TTSEEEEEECTTSSTTC--------------------CEESSHHHHHHH
T ss_pred CCCCCeEEEECCCCcCCCHHHHHHHHHHhC-CCceEEEeeCCCCCCCC--------------------CCCCCHHHHHHH
Confidence 3456799999995 678888999999994 89999999999875211 001234455555
Q ss_pred HHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch--hhhhcc----------
Q 025121 109 IANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR--NLRNKI---------- 176 (257)
Q Consensus 109 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~---------- 176 (257)
+.+.+.......+++|+||||||.+++.++.+.. ..+.+++++++++++.+... ......
T Consensus 137 ~~~~l~~~~~~~~~~lvGhS~Gg~vA~~~A~~~~--------~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (319)
T 3lcr_A 137 LADVVQAEVADGEFALAGHSSGGVVAYEVARELE--------ARGLAPRGVVLIDSYSFDGDGGRPEELFRSALNERFVE 208 (319)
T ss_dssp HHHHHHHHHTTSCEEEEEETHHHHHHHHHHHHHH--------HTTCCCSCEEEESCCCCCSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEEECHHHHHHHHHHHHHH--------hcCCCccEEEEECCCCCCccchhhHHHHHHHHHHHHhh
Confidence 5555554323349999999999999999998531 11567999999987765433 111100
Q ss_pred ----ccch--H---------------HHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC
Q 025121 177 ----EGSH--E---------------AARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV 235 (257)
Q Consensus 177 ----~~~~--~---------------~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 235 (257)
.... . .....+++|+++++|++ ..++.+....+.+.+.. ..+++++++ +|..+
T Consensus 209 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~PvLli~g~~-~~~~~~~~~~~~~~~~~----~~~~~~~~g-~H~~~ 282 (319)
T 3lcr_A 209 YLRLTGGGNLSQRITAQVWCLELLRGWRPEGLTAPTLYVRPAQ-PLVEQEKPEWRGDVLAA----MGQVVEAPG-DHFTI 282 (319)
T ss_dssp HHHHHCCCCHHHHHHHHHHHHHHTTTCCCCCCSSCEEEEEESS-CSSSCCCTHHHHHHHHT----CSEEEEESS-CTTGG
T ss_pred hhcccCCCchhHHHHHHHHHHHHHhcCCCCCcCCCEEEEEeCC-CCCCcccchhhhhcCCC----CceEEEeCC-CcHHh
Confidence 0000 0 01135689999999998 55666777778777763 468889997 67654
Q ss_pred HH------HHHHHHHHHHHhcC
Q 025121 236 PK------EMDEVCNWLTARLG 251 (257)
Q Consensus 236 ~~------~~~~~~~~l~~~l~ 251 (257)
.+ ..+.+.+||.+...
T Consensus 283 ~~~~~~~~va~~i~~fL~~~~~ 304 (319)
T 3lcr_A 283 IEGEHVASTAHIVGDWLREAHA 304 (319)
T ss_dssp GSTTTHHHHHHHHHHHHHHHHC
T ss_pred hCcccHHHHHHHHHHHHHhccc
Confidence 32 34566777766543
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=99.78 E-value=3.7e-19 Score=135.16 Aligned_cols=87 Identities=15% Similarity=0.145 Sum_probs=63.7
Q ss_pred CCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025121 31 GKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
..++++||++||++++...|..+++.|. .+|+|+++|+||||.+... ...++.+.++.
T Consensus 10 ~~~~~~lv~lhg~g~~~~~~~~~~~~L~-~~~~vi~~Dl~GhG~S~~~-------------------~~~~~~~~~~~-- 67 (242)
T 2k2q_B 10 ASEKTQLICFPFAGGYSASFRPLHAFLQ-GECEMLAAEPPGHGTNQTS-------------------AIEDLEELTDL-- 67 (242)
T ss_dssp TTCCCEEESSCCCCHHHHHHHHHHHHHC-CSCCCEEEECCSSCCSCCC-------------------TTTHHHHHHHH--
T ss_pred CCCCceEEEECCCCCCHHHHHHHHHhCC-CCeEEEEEeCCCCCCCCCC-------------------CcCCHHHHHHH--
Confidence 3456789999999999999999999997 5799999999988654210 12233333333
Q ss_pred HHhccCCC--CceEEEEEechhHHHHHHHHHh
Q 025121 111 NLLSTEPA--DVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 111 ~~~~~~~~--~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
+++.... ..+++|+||||||.+|+.+|.+
T Consensus 68 -~~~~l~~~~~~~~~lvGhSmGG~iA~~~A~~ 98 (242)
T 2k2q_B 68 -YKQELNLRPDRPFVLFGHSMGGMITFRLAQK 98 (242)
T ss_dssp -TTTTCCCCCCSSCEEECCSSCCHHHHHHHHH
T ss_pred -HHHHHHhhcCCCEEEEeCCHhHHHHHHHHHH
Confidence 3332211 2489999999999999999986
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=3.1e-18 Score=134.88 Aligned_cols=184 Identities=13% Similarity=0.078 Sum_probs=113.9
Q ss_pred CceEEEEEccCCCCccc-hH-HHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSS-WS-QLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~-~~-~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
..++|||+||++++... |. .+++.|.+.||.|+++|+|++|.+. ......+....+.
T Consensus 30 ~~~~VvllHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~~g~g~~~---------------------~~~~~~~l~~~i~ 88 (317)
T 1tca_A 30 VSKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLND---------------------TQVNTEYMVNAIT 88 (317)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSC---------------------HHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCCcchhhHHHHHHHHHhCCCEEEEECCCCCCCCc---------------------HHHHHHHHHHHHH
Confidence 45689999999999886 88 8889998789999999998653210 0112233334444
Q ss_pred HHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh-------------hhhccc
Q 025121 111 NLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN-------------LRNKIE 177 (257)
Q Consensus 111 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------------~~~~~~ 177 (257)
.+++... ..++.|+||||||.++..++.+.+ ..+.+++++|++++....... ..+...
T Consensus 89 ~~~~~~g-~~~v~lVGhS~GG~va~~~~~~~~--------~~~~~v~~lV~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 159 (317)
T 1tca_A 89 ALYAGSG-NNKLPVLTWSQGGLVAQWGLTFFP--------SIRSKVDRLMAFAPDYKGTVLAGPLDALAVSAPSVWQQTT 159 (317)
T ss_dssp HHHHHTT-SCCEEEEEETHHHHHHHHHHHHCG--------GGTTTEEEEEEESCCTTCBGGGHHHHHTTCBCHHHHHTBT
T ss_pred HHHHHhC-CCCEEEEEEChhhHHHHHHHHHcC--------ccchhhhEEEEECCCCCCCcchhhhhhhhhcCchHHhhCc
Confidence 4443332 249999999999999998887531 013689999999886432210 000000
Q ss_pred cchH-HHh-----hhcCCCEEEEccCCCCcccchh--hHHHHHHhhhcCceeeEEEE----ecCCCCccC---HHHHHHH
Q 025121 178 GSHE-AAR-----RAASLPILLTHGLCDDVVPYKY--GEKSANCLSISGFRHLTFKS----FEGLGHYTV---PKEMDEV 242 (257)
Q Consensus 178 ~~~~-~~~-----~~~~~P~l~~~G~~D~~v~~~~--~~~~~~~l~~~~~~~~~~~~----~~g~~H~~~---~~~~~~~ 242 (257)
.... ... ....+|+++++|+.|.+|++.. ++.....+... +++.+.. .++.+|..+ ++.++.+
T Consensus 160 ~s~f~~~L~~~~~~~~~vp~~~i~g~~D~iV~p~~~~g~~~~~~l~~a--~~~~~~~~~~~~~~~gH~~~l~~p~~~~~v 237 (317)
T 1tca_A 160 GSALTTALRNAGGLTQIVPTTNLYSATDEIVQPQVSNSPLDSSYLFNG--KNVQAQAVCGPLFVIDHAGSLTSQFSYVVG 237 (317)
T ss_dssp TCHHHHHHHHTTTTBCSSCEEEEECTTCSSSCCCCSSSTTSTTCCBTS--EEEEHHHHHCTTCCCCTTHHHHBHHHHHHH
T ss_pred CcHHHHHHHhcCCCCCCCCEEEEEeCCCCeECCccccccchhhhccCC--ccEEeeeccCCCCccCcccccCCHHHHHHH
Confidence 0000 011 1247899999999999998766 22222223211 1222211 147899865 5567788
Q ss_pred HHHHHH
Q 025121 243 CNWLTA 248 (257)
Q Consensus 243 ~~~l~~ 248 (257)
.+||..
T Consensus 238 ~~~L~~ 243 (317)
T 1tca_A 238 RSALRS 243 (317)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 888876
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=2.1e-17 Score=134.39 Aligned_cols=95 Identities=16% Similarity=0.125 Sum_probs=71.0
Q ss_pred CCCceEEEEEccCCCCccchHHHhhcCCC------CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025121 31 GKHQATIVWLHGLGDNGSSWSQLLESLPL------PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~~~~~~l~~------~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
.+..++|||+||++++...|..++..|+. .||+|+++|+||+|.+..... ....++.+
T Consensus 106 ~~~~~pllllHG~~~s~~~~~~~~~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~~~----------------~~~~~~~~ 169 (408)
T 3g02_A 106 REDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPPL----------------DKDFGLMD 169 (408)
T ss_dssp CTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCSCS----------------SSCCCHHH
T ss_pred CCCCCeEEEECCCCCcHHHHHHHHHHHhcccccccCceEEEEECCCCCCCCCCCCC----------------CCCCCHHH
Confidence 34567899999999999999998888874 589999999998875432210 01223455
Q ss_pred HHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhc
Q 025121 105 SAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 105 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
.++++.++++......+++++||||||.+++.++.+.
T Consensus 170 ~a~~~~~l~~~lg~~~~~~lvG~S~Gg~ia~~~A~~~ 206 (408)
T 3g02_A 170 NARVVDQLMKDLGFGSGYIIQGGDIGSFVGRLLGVGF 206 (408)
T ss_dssp HHHHHHHHHHHTTCTTCEEEEECTHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCCCCEEEeCCCchHHHHHHHHHhC
Confidence 6666666666554323899999999999999999963
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=3.1e-17 Score=128.31 Aligned_cols=167 Identities=15% Similarity=0.208 Sum_probs=105.2
Q ss_pred CCceEEEEEccCCCCccch-------HHHhhcCCC----CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchh
Q 025121 32 KHQATIVWLHGLGDNGSSW-------SQLLESLPL----PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWE 100 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~-------~~~~~~l~~----~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~ 100 (257)
++.|+||++||.+++...| ..+++.|.. .++.|+++|.++.. + ......
T Consensus 67 ~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~~~-----~---------------~~~~~~ 126 (297)
T 1gkl_A 67 KKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGN-----C---------------TAQNFY 126 (297)
T ss_dssp SCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCSTT-----C---------------CTTTHH
T ss_pred CCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcCCc-----c---------------chHHHH
Confidence 4678999999998766544 234555543 36999999965210 0 000111
Q ss_pred hHHHHHHHHHHHhccC--------------CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCC
Q 025121 101 GLDASAAHIANLLSTE--------------PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWL 166 (257)
Q Consensus 101 ~~~~~~~~~~~~~~~~--------------~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 166 (257)
...+..+..+++.. ....+++|+|+||||.+|+.++.+. |+.++++++++|.+
T Consensus 127 --~~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~-----------p~~f~~~v~~sg~~ 193 (297)
T 1gkl_A 127 --QEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNC-----------LDYVAYFMPLSGDY 193 (297)
T ss_dssp --HHHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHH-----------TTTCCEEEEESCCC
T ss_pred --HHHHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhC-----------chhhheeeEecccc
Confidence 12233333333321 1234799999999999999999854 88999999999865
Q ss_pred CCchhhhh---cccc-chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcC----------ceeeEEEEecCCCC
Q 025121 167 PGSRNLRN---KIEG-SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISG----------FRHLTFKSFEGLGH 232 (257)
Q Consensus 167 ~~~~~~~~---~~~~-~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~----------~~~~~~~~~~g~~H 232 (257)
.....-.. .+.. ...........++++.+|+.|..+ ...+++.+.|++.+ + ++++.+++|++|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~~D~~~--~~~~~l~~~L~~~g~~~~~~~~~~~-~~~~~~~~g~gH 270 (297)
T 1gkl_A 194 WYGNSPQDKANSIAEAINRSGLSKREYFVFAATGSEDIAY--ANMNPQIEAMKALPHFDYTSDFSKG-NFYFLVAPGATH 270 (297)
T ss_dssp CBSSSHHHHHHHHHHHHHHHTCCTTSCEEEEEEETTCTTH--HHHHHHHHHHHTSTTCCBBSCTTTC-CEEEEEETTCCS
T ss_pred ccCCccchhhhHHHHHHhhccCCcCcEEEEEEeCCCcccc--hhHHHHHHHHHHcCCccccccccCC-ceEEEECCCCCc
Confidence 43211000 0000 000011122355667789999764 46788999999887 4 789999999999
Q ss_pred cc
Q 025121 233 YT 234 (257)
Q Consensus 233 ~~ 234 (257)
.+
T Consensus 271 ~~ 272 (297)
T 1gkl_A 271 WW 272 (297)
T ss_dssp SH
T ss_pred CH
Confidence 75
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.74 E-value=1.6e-16 Score=138.49 Aligned_cols=170 Identities=16% Similarity=0.073 Sum_probs=111.7
Q ss_pred hhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhccC----------------C
Q 025121 54 LESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTE----------------P 117 (257)
Q Consensus 54 ~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~ 117 (257)
...|+.+||.|+++|.||+|.+. |.. ....... .+++.++.+++... .
T Consensus 274 ~~~la~~GYaVv~~D~RG~G~S~--G~~-------------~~~~~~e-~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~~ 337 (763)
T 1lns_A 274 NDYFLTRGFASIYVAGVGTRSSD--GFQ-------------TSGDYQQ-IYSMTAVIDWLNGRARAYTSRKKTHEIKASW 337 (763)
T ss_dssp HHHHHTTTCEEEEECCTTSTTSC--SCC-------------CTTSHHH-HHHHHHHHHHHTTSSCEESSTTCCCEECCTT
T ss_pred HHHHHHCCCEEEEECCCcCCCCC--CcC-------------CCCCHHH-HHHHHHHHHHHhhcccccccccccccccccC
Confidence 35667799999999999876432 210 0011122 33344444555421 1
Q ss_pred CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhh------------h------------
Q 025121 118 ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL------------R------------ 173 (257)
Q Consensus 118 ~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~------------~------------ 173 (257)
...+|+++|+||||++++.+|.+. ++.++++|..++.......+ .
T Consensus 338 ~~grVgl~G~SyGG~ial~~Aa~~-----------p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~~~l~~~~~ 406 (763)
T 1lns_A 338 ANGKVAMTGKSYLGTMAYGAATTG-----------VEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTY 406 (763)
T ss_dssp EEEEEEEEEETHHHHHHHHHHTTT-----------CTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHC
T ss_pred CCCcEEEEEECHHHHHHHHHHHhC-----------CcccEEEEEecccccHHHHhhhcchhhhcccCCchhhhHHhHHHH
Confidence 234999999999999999999853 77899998887653110000 0
Q ss_pred -hc-------------------c----------------ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhc
Q 025121 174 -NK-------------------I----------------EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSIS 217 (257)
Q Consensus 174 -~~-------------------~----------------~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~ 217 (257)
.. . ..........+++|+|++||..|..++++.+.++++.++.
T Consensus 407 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~al~~- 485 (763)
T 1lns_A 407 SRNLDGADFLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPE- 485 (763)
T ss_dssp GGGGSHHHHHHHHHHHHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCT-
T ss_pred hhhcCcchhhhHHHHHHHHHHHHHhhhhhccCchhHHhhccChhhHhhcCCCCEEEEEECCCCCCChHHHHHHHHhhcc-
Confidence 00 0 0001123456789999999999999999999999999986
Q ss_pred CceeeEEEEecCCCCccC-----HHHHHHHHHHHHHhcCcC
Q 025121 218 GFRHLTFKSFEGLGHYTV-----PKEMDEVCNWLTARLGLE 253 (257)
Q Consensus 218 ~~~~~~~~~~~g~~H~~~-----~~~~~~~~~~l~~~l~~~ 253 (257)
+. ..++++ ++++|... .+..+.+.+||.++|+..
T Consensus 486 ~~-~~~l~i-~~~gH~~~~~~~~~~~~~~i~~Ffd~~Lkg~ 524 (763)
T 1lns_A 486 GH-AKHAFL-HRGAHIYMNSWQSIDFSETINAYFVAKLLDR 524 (763)
T ss_dssp TC-CEEEEE-ESCSSCCCTTBSSCCHHHHHHHHHHHHHTTC
T ss_pred CC-CeEEEE-eCCcccCccccchHHHHHHHHHHHHHHhcCC
Confidence 43 445555 55699864 235789999999998754
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.74 E-value=3.1e-18 Score=139.13 Aligned_cols=183 Identities=11% Similarity=0.088 Sum_probs=106.4
Q ss_pred CCCceEEeCCC-CCCceEEEEEccCCCCccch--------------H----HHhhcCCCCceEEEccCCCCCCcccCCCC
Q 025121 20 EFGRTHVVRPK-GKHQATIVWLHGLGDNGSSW--------------S----QLLESLPLPNIKWICPTAPTRPVAILGGF 80 (257)
Q Consensus 20 ~~~~~~~~~~~-~~~~~~vi~~HG~~~~~~~~--------------~----~~~~~l~~~g~~v~~~d~~~~g~~~~~g~ 80 (257)
.+...++.++. ..+.|+||++||.+++...+ . .+++.|+++||.|+++|.+++|.+.....
T Consensus 99 ~l~~~l~~P~~~~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~Vl~~D~rg~G~s~~~~~ 178 (391)
T 3g8y_A 99 VSTFLVLKPEHLKGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVAVAVDNAAAGEASDLEC 178 (391)
T ss_dssp CEEEEEEEETTCCSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCEEEECCCTTSGGGCSSGG
T ss_pred EEEEEEEeCCCCCCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCCEEEEecCCCccccCCccc
Confidence 33334444443 46789999999999876422 2 56778888999999999998876543211
Q ss_pred cccccccCCCCCCCCCCchhhH---------------HHHHHHHHHHhccCC--CCceEEEEEechhHHHHHHHHHhccc
Q 025121 81 PCTAWFDVGELSDDGPEDWEGL---------------DASAAHIANLLSTEP--ADVKVGIGGFSMGAAVALYSATCCAL 143 (257)
Q Consensus 81 ~~~~w~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~ 143 (257)
....| ......+ ..++..+.+++.... +..+|+++||||||.+++.++..
T Consensus 179 ~~~~~----------~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~a~~--- 245 (391)
T 3g8y_A 179 YDKGW----------NYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVLGVL--- 245 (391)
T ss_dssp GTTTT----------SCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHHHHH---
T ss_pred ccccc----------cchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHHHHc---
Confidence 00000 0011111 122333344454432 23599999999999999998875
Q ss_pred cCCCCCCCcccccceEEEeccCCCCchhh--h----------------hcc----c--cchHHHhhhcCCCEEEEccCCC
Q 025121 144 GRYGNGIPYYVNLRAVVGLSGWLPGSRNL--R----------------NKI----E--GSHEAARRAASLPILLTHGLCD 199 (257)
Q Consensus 144 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~----------------~~~----~--~~~~~~~~~~~~P~l~~~G~~D 199 (257)
+++++++|+.+++....... . ... . ............|+|++||+.|
T Consensus 246 ---------~~~i~a~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~~~d~~~~~~~~ap~P~LiihG~~D 316 (391)
T 3g8y_A 246 ---------DKDIYAFVYNDFLCQTQERAVVMTKPDKENRRPFPNSIRHLIPGYWRYFNFPDVVASLAPRPIIFTEGGLD 316 (391)
T ss_dssp ---------CTTCCEEEEESCBCCHHHHHHHCCCCCTTSCCCCSSCGGGCCTTGGGTCCHHHHHHTTTTSCEEECSCBCH
T ss_pred ---------CCceeEEEEccCCCCcccchhhcccccccccccccccHHHhCccHHhhCCHHHHHHhhcCCCEEEEcCCcc
Confidence 67899988776543321100 0 000 0 0111122233579999999999
Q ss_pred CcccchhhHHHHHHhhhcCceeeEEEEec
Q 025121 200 DVVPYKYGEKSANCLSISGFRHLTFKSFE 228 (257)
Q Consensus 200 ~~v~~~~~~~~~~~l~~~~~~~~~~~~~~ 228 (257)
.++ +..+++++..... .++++..++
T Consensus 317 ~~v--~~~~~~~~~~g~~--~~~~~~~~~ 341 (391)
T 3g8y_A 317 RDF--RLVQSAYAASGKP--ENAEFHHYP 341 (391)
T ss_dssp HHH--HHHHHHHHHTTCG--GGEEECCCG
T ss_pred HHH--HHHHHHHHHcCCC--ceeEEEEeC
Confidence 987 4445555544321 245666655
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.6e-17 Score=135.22 Aligned_cols=186 Identities=16% Similarity=0.119 Sum_probs=105.6
Q ss_pred CCceEEeCCC-CCCceEEEEEccCCCCccch--------------H----HHhhcCCCCceEEEccCCCCCCcccCCCCc
Q 025121 21 FGRTHVVRPK-GKHQATIVWLHGLGDNGSSW--------------S----QLLESLPLPNIKWICPTAPTRPVAILGGFP 81 (257)
Q Consensus 21 ~~~~~~~~~~-~~~~~~vi~~HG~~~~~~~~--------------~----~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~ 81 (257)
+...++.++. ..+.|+||++||.+++...+ . .+++.|+++||.|+++|.+++|.+.....
T Consensus 105 l~~~l~~P~~~~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~- 183 (398)
T 3nuz_A 105 STFLVLIPDNINKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIAVAVDNPAAGEASDLER- 183 (398)
T ss_dssp EEEEEEEESSCCSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCEEEEECCTTSGGGCSSGG-
T ss_pred EEEEEEeCCCCCCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCCCEEEEecCCCCCccccccc-
Confidence 3334443443 46789999999998876532 1 47778888999999999998876543210
Q ss_pred ccccccCCCCCCC-----------CCCchhhHHHHHHHHHHHhccCC--CCceEEEEEechhHHHHHHHHHhccccCCCC
Q 025121 82 CTAWFDVGELSDD-----------GPEDWEGLDASAAHIANLLSTEP--ADVKVGIGGFSMGAAVALYSATCCALGRYGN 148 (257)
Q Consensus 82 ~~~w~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~ 148 (257)
+..+ .... ..........++..+.+++.... +..+|+++||||||++++.++..
T Consensus 184 ----~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~~aa~-------- 250 (398)
T 3nuz_A 184 ----YTLG-SNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVLGTL-------- 250 (398)
T ss_dssp ----GTTT-TSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHHHHHH--------
T ss_pred ----cccc-cccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHHHHhc--------
Confidence 0000 0000 00001011122333344554432 23599999999999999988875
Q ss_pred CCCcccccceEEEeccCCCCchh--h----------------hhcc------ccchHHHhhhcCCCEEEEccCCCCcccc
Q 025121 149 GIPYYVNLRAVVGLSGWLPGSRN--L----------------RNKI------EGSHEAARRAASLPILLTHGLCDDVVPY 204 (257)
Q Consensus 149 ~~~~~~~~~~~i~~~~~~~~~~~--~----------------~~~~------~~~~~~~~~~~~~P~l~~~G~~D~~v~~ 204 (257)
+++++++++.++....... . .... .............|+|++||+.|..+
T Consensus 251 ----~~~i~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~ap~PlLii~G~~D~~v-- 324 (398)
T 3nuz_A 251 ----DTSIYAFVYNDFLCQTQERAEVMTMPDKNGRRPFPNSIRHLIPDFWKNFNFPDIVAALAPRPIILTEGGLDRDL-- 324 (398)
T ss_dssp ----CTTCCEEEEESCBCCHHHHHHHCCCCCTTSCCCCSSCGGGCCTTHHHHCCHHHHHHHTTTSCEEECSCBCHHHH--
T ss_pred ----CCcEEEEEEecccccchhhhhhhccccccccccCCccHHHhcchHhhhCCHHHHHHhhCCCcEEEeeCCchHHH--
Confidence 5678888875443211110 0 0000 01111122234579999999999665
Q ss_pred hhhHHHHHHhhhcCceeeEEEEec
Q 025121 205 KYGEKSANCLSISGFRHLTFKSFE 228 (257)
Q Consensus 205 ~~~~~~~~~l~~~~~~~~~~~~~~ 228 (257)
+..+++++.+... .++++..+|
T Consensus 325 ~~~~~~y~~~g~~--~~~~~~~~p 346 (398)
T 3nuz_A 325 DLVRKAYAIVGTP--DNVKIYHYK 346 (398)
T ss_dssp HHHHHHHHHHTCT--TSEEECCCG
T ss_pred HHHHHHHHHcCCC--cceEEEEeC
Confidence 4455666655432 156677666
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=99.72 E-value=3.5e-17 Score=123.32 Aligned_cols=173 Identities=15% Similarity=0.087 Sum_probs=112.7
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.++|+++||++++...|..+++.|. . +.|+++|+|+++. ...+....+..+
T Consensus 17 ~~~l~~~hg~~~~~~~~~~~~~~l~-~-~~v~~~d~~g~~~--------------------------~~~~~~~~i~~~- 67 (230)
T 1jmk_C 17 EQIIFAFPPVLGYGLMYQNLSSRLP-S-YKLCAFDFIEEED--------------------------RLDRYADLIQKL- 67 (230)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHCT-T-EEEEEECCCCSTT--------------------------HHHHHHHHHHHH-
T ss_pred CCCEEEECCCCCchHHHHHHHHhcC-C-CeEEEecCCCHHH--------------------------HHHHHHHHHHHh-
Confidence 5789999999999999999999997 4 9999999885320 112222222222
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch----------hhhh---------
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR----------NLRN--------- 174 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----------~~~~--------- 174 (257)
....++.|+|||+||.+++.++.+.+. ...++.++++++++.+... .+..
T Consensus 68 ---~~~~~~~l~G~S~Gg~ia~~~a~~~~~--------~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (230)
T 1jmk_C 68 ---QPEGPLTLFGYSAGCSLAFEAAKKLEG--------QGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNE 136 (230)
T ss_dssp ---CCSSCEEEEEETHHHHHHHHHHHHHHH--------TTCCEEEEEEESCCEECCCC--------CCHHHHHHHTTTCS
T ss_pred ---CCCCCeEEEEECHhHHHHHHHHHHHHH--------cCCCccEEEEECCCCCCcccccccccHHHHHHHHHhcChhhh
Confidence 223489999999999999999986411 1246788888776543210 0000
Q ss_pred ---------cccc----chHH-----HhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCC--cc
Q 025121 175 ---------KIEG----SHEA-----ARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGH--YT 234 (257)
Q Consensus 175 ---------~~~~----~~~~-----~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H--~~ 234 (257)
.+.. .... ....+++|+++++|++|..++. ....+.+... .+++++.++| +| .+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~-~~~~w~~~~~----~~~~~~~i~g-~H~~~~ 210 (230)
T 1jmk_C 137 ALNSEAVKHGLKQKTHAFYSYYVNLISTGQVKADIDLLTSGADFDIPE-WLASWEEATT----GAYRMKRGFG-THAEML 210 (230)
T ss_dssp GGGSHHHHHHHHHHHHHHHHHHHHCCCCSCBSSEEEEEECSSCCCCCT-TEECSGGGBS----SCEEEEECSS-CGGGTT
T ss_pred hhhhHHHHHHHHHHHHHHHHHhhhccccccccccEEEEEeCCCCCCcc-ccchHHHhcC----CCeEEEEecC-ChHHHc
Confidence 0000 0000 1134678999999999998873 2222222221 1578999997 99 77
Q ss_pred CHHHHHHHHHHHHHhcCc
Q 025121 235 VPKEMDEVCNWLTARLGL 252 (257)
Q Consensus 235 ~~~~~~~~~~~l~~~l~~ 252 (257)
..+..+.+.+.|.+++..
T Consensus 211 ~~~~~~~~~~~i~~~l~~ 228 (230)
T 1jmk_C 211 QGETLDRNAGILLEFLNT 228 (230)
T ss_dssp SHHHHHHHHHHHHHHHTC
T ss_pred CcHhHHHHHHHHHHHHhh
Confidence 777788888888887754
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=99.71 E-value=3.8e-17 Score=126.49 Aligned_cols=128 Identities=15% Similarity=0.091 Sum_probs=90.9
Q ss_pred HHHHHHhccCC--CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh-hhhccccch-HH
Q 025121 107 AHIANLLSTEP--ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN-LRNKIEGSH-EA 182 (257)
Q Consensus 107 ~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~-~~ 182 (257)
+.+..++++.. ...+++|+||||||.+++.++.+. ++.++++++++|.+..... +........ ..
T Consensus 137 ~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~-----------p~~f~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 205 (275)
T 2qm0_A 137 EELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTN-----------LNAFQNYFISSPSIWWNNKSVLEKEENLIIEL 205 (275)
T ss_dssp HTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHC-----------GGGCSEEEEESCCTTHHHHGGGGGTTHHHHHH
T ss_pred HHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhC-----------chhhceeEEeCceeeeChHHHHHHHHHHHhhh
Confidence 44555554432 235899999999999999999964 8889999999987643221 111100000 00
Q ss_pred HhhhcCCCEEEEccCCCCcccchhhHHHHHHh---hhcCceeeEEEEecCCCCccC-HHHHHHHHHHH
Q 025121 183 ARRAASLPILLTHGLCDDVVPYKYGEKSANCL---SISGFRHLTFKSFEGLGHYTV-PKEMDEVCNWL 246 (257)
Q Consensus 183 ~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l---~~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~~l 246 (257)
.......|+++++|+.|..++.+.++++++.+ ++.++ ++++.+++|.+|+.. ...+...++||
T Consensus 206 ~~~~~~~~~~l~~G~~D~~~~~~~~~~~~~~L~~~~~~g~-~~~~~~~~g~~H~~~~~~~l~~~l~~l 272 (275)
T 2qm0_A 206 NNAKFETGVFLTVGSLEREHMVVGANELSERLLQVNHDKL-KFKFYEAEGENHASVVPTSLSKGLRFI 272 (275)
T ss_dssp HTCSSCEEEEEEEETTSCHHHHHHHHHHHHHHHHCCCTTE-EEEEEEETTCCTTTHHHHHHHHHHHHH
T ss_pred cccCCCceEEEEeCCcccchhhHHHHHHHHHHHhcccCCc-eEEEEECCCCCccccHHHHHHHHHHHH
Confidence 13445679999999999998999999999999 56666 789999999999754 44556666776
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.4e-16 Score=121.15 Aligned_cols=173 Identities=8% Similarity=-0.005 Sum_probs=107.5
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
..++|+++||++++...|..+++.|. .++.|+++|+|+++ .. +..+.+.
T Consensus 21 ~~~~l~~~hg~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~~--------------------------~~----~~~~~~~ 69 (244)
T 2cb9_A 21 GGKNLFCFPPISGFGIYFKDLALQLN-HKAAVYGFHFIEED--------------------------SR----IEQYVSR 69 (244)
T ss_dssp CSSEEEEECCTTCCGGGGHHHHHHTT-TTSEEEEECCCCST--------------------------TH----HHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHhC-CCceEEEEcCCCHH--------------------------HH----HHHHHHH
Confidence 45689999999999999999999997 68999999988421 01 2222233
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch--------hhhh--------cc
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR--------NLRN--------KI 176 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~~~--------~~ 176 (257)
++......+++|+||||||.+++.++.+.+. .+.++.++++++++.+... .+.. .+
T Consensus 70 i~~~~~~~~~~l~GhS~Gg~va~~~a~~~~~--------~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (244)
T 2cb9_A 70 ITEIQPEGPYVLLGYSAGGNLAFEVVQAMEQ--------KGLEVSDFIIVDAYKKDQSITADTENDDSAAYLPEAVRETV 141 (244)
T ss_dssp HHHHCSSSCEEEEEETHHHHHHHHHHHHHHH--------TTCCEEEEEEESCCCCCSCCCCC-------CCSCHHHHHHH
T ss_pred HHHhCCCCCEEEEEECHhHHHHHHHHHHHHH--------cCCCccEEEEEcCCCCcccccccccHHHHHHHhHHHHHHHH
Confidence 3322223489999999999999999985310 1356888888877654210 0000 00
Q ss_pred ----ccchHH-----HhhhcCCCEEEEccC--CCCcccchhhHHHHHHhhhcCceeeEEEEecCCCC--ccCHHHHHHHH
Q 025121 177 ----EGSHEA-----ARRAASLPILLTHGL--CDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGH--YTVPKEMDEVC 243 (257)
Q Consensus 177 ----~~~~~~-----~~~~~~~P~l~~~G~--~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H--~~~~~~~~~~~ 243 (257)
...... ....+++|+++++|+ +|.+ +.+....+.+.+. .+++++.++| +| .+..+..+.+.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g~~~~D~~-~~~~~~~w~~~~~----~~~~~~~i~g-gH~~~~~~~~~~~~~ 215 (244)
T 2cb9_A 142 MQKKRCYQEYWAQLINEGRIKSNIHFIEAGIQTETS-GAMVLQKWQDAAE----EGYAEYTGYG-AHKDMLEGEFAEKNA 215 (244)
T ss_dssp THHHHHHHHHHHHCCCCSCBSSEEEEEECSBCSCCC-HHHHTTSSGGGBS----SCEEEEECSS-BGGGTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccCCCcCCCEEEEEccCccccc-cccchhHHHHhcC----CCCEEEEecC-ChHHHcChHHHHHHH
Confidence 000000 123467899999999 8874 3333222222221 1578999997 99 66655555544
Q ss_pred HHHHHhc
Q 025121 244 NWLTARL 250 (257)
Q Consensus 244 ~~l~~~l 250 (257)
+.|.+++
T Consensus 216 ~~i~~~L 222 (244)
T 2cb9_A 216 NIILNIL 222 (244)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444443
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=99.69 E-value=1.9e-16 Score=123.06 Aligned_cols=111 Identities=13% Similarity=0.117 Sum_probs=83.1
Q ss_pred CCCceEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCch
Q 025121 20 EFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDW 99 (257)
Q Consensus 20 ~~~~~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~ 99 (257)
.....+.+.+.+...++||++||++++...|..++..|. +.|+++|+++. ...
T Consensus 10 ~~~~~~~~~~~~~~~~~l~~~hg~~~~~~~~~~~~~~L~---~~v~~~d~~~~------------------------~~~ 62 (283)
T 3tjm_A 10 EGPTLMRLNSVQSSERPLFLVHPIEGSTTVFHSLASRLS---IPTYGLQCTRA------------------------APL 62 (283)
T ss_dssp TSCSEEECSCCCSSSCCEEEECCTTCCSGGGHHHHHHCS---SCEEEECCCTT------------------------SCC
T ss_pred ccccceecCCCCCCCCeEEEECCCCCCHHHHHHHHHhcC---ceEEEEecCCC------------------------CCC
Confidence 344455556666667889999999999999999999996 89999997521 112
Q ss_pred hhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccc---eEEEeccC
Q 025121 100 EGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLR---AVVGLSGW 165 (257)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~ 165 (257)
.++.+.++++.+.++......++.|+||||||.+++.++.+.. ..+.++. +++++++.
T Consensus 63 ~~~~~~a~~~~~~i~~~~~~~~~~l~GhS~Gg~va~~~a~~~~--------~~~~~v~~~~~lvlid~~ 123 (283)
T 3tjm_A 63 DSIHSLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQ--------AQQSPAPTHNSLFLFDGS 123 (283)
T ss_dssp SCHHHHHHHHHHHHTTTCCSSCCEEEEETHHHHHHHHHHHHHH--------HHHTTSCCCCEEEEESCC
T ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEEEECHhHHHHHHHHHHHH--------HcCCCCCccceEEEEcCC
Confidence 3556777788888877654459999999999999999998531 0155677 88888764
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=99.69 E-value=8.2e-17 Score=127.79 Aligned_cols=184 Identities=14% Similarity=0.092 Sum_probs=122.3
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
..++|+++||++++...|..+++.|. .++.|+++|.|+++.+.. ...++.+.+..+.+.
T Consensus 100 ~~~~l~~lhg~~~~~~~~~~l~~~L~-~~~~v~~~d~~g~~~~~~--------------------~~~~~~~~a~~~~~~ 158 (329)
T 3tej_A 100 NGPTLFCFHPASGFAWQFSVLSRYLD-PQWSIIGIQSPRPNGPMQ--------------------TAANLDEVCEAHLAT 158 (329)
T ss_dssp SSCEEEEECCTTSCCGGGGGGGGTSC-TTCEEEEECCCTTTSHHH--------------------HCSSHHHHHHHHHHH
T ss_pred CCCcEEEEeCCcccchHHHHHHHhcC-CCCeEEEeeCCCCCCCCC--------------------CCCCHHHHHHHHHHH
Confidence 45789999999999999999999995 789999999997542110 012345555555555
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhh------------c-----
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN------------K----- 175 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~------------~----- 175 (257)
+.......++.|+||||||.+++.++.+.. ..+.++.+++++.++.+....... .
T Consensus 159 i~~~~~~~~~~l~G~S~Gg~ia~~~a~~L~--------~~~~~v~~lvl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (329)
T 3tej_A 159 LLEQQPHGPYYLLGYSLGGTLAQGIAARLR--------ARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINRER 230 (329)
T ss_dssp HHHHCSSSCEEEEEETHHHHHHHHHHHHHH--------HTTCCEEEEEEESCCCTHHHHTC-----CCCCTHHHHHHHHH
T ss_pred HHHhCCCCCEEEEEEccCHHHHHHHHHHHH--------hcCCcccEEEEeCCCCCCccccccccccccChhhHHHHHHHH
Confidence 544333349999999999999999998621 137789999999876654211000 0
Q ss_pred -------cccc--------h---HH--------HhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecC
Q 025121 176 -------IEGS--------H---EA--------ARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEG 229 (257)
Q Consensus 176 -------~~~~--------~---~~--------~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g 229 (257)
.... . .. ......+|++++.|+.|..++.+....+.+.. ++++++.+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~d~~~~~~~~~~w~~~~-----~~~~~~~v~g 305 (329)
T 3tej_A 231 EAFLAAQQGSTSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWI-----AELDIYRQDC 305 (329)
T ss_dssp HHHHHTTCCCSCCHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEEEEEGGGCCTTCCHHHHHTTTE-----EEEEEEEESS
T ss_pred HHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCCCcCCCeEEEEeccCCCCCCCchhhHHHhc-----CCcEEEEecC
Confidence 0000 0 00 01234679999999999887766544444433 2789999995
Q ss_pred CCCccC--HHHHHHHHHHHHHhcC
Q 025121 230 LGHYTV--PKEMDEVCNWLTARLG 251 (257)
Q Consensus 230 ~~H~~~--~~~~~~~~~~l~~~l~ 251 (257)
+|+.+ +...+.+.+.|.+++.
T Consensus 306 -~H~~~~~~~~~~~ia~~l~~~L~ 328 (329)
T 3tej_A 306 -AHVDIISPGTFEKIGPIIRATLN 328 (329)
T ss_dssp -CGGGGGSTTTHHHHHHHHHHHHC
T ss_pred -ChHHhCCChHHHHHHHHHHHHhc
Confidence 88754 3345677777776653
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.69 E-value=6.1e-16 Score=132.36 Aligned_cols=208 Identities=13% Similarity=0.013 Sum_probs=127.0
Q ss_pred CCCCCCceEEEEEccCCCCc-------cchHH-Hh---hcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCC
Q 025121 28 RPKGKHQATIVWLHGLGDNG-------SSWSQ-LL---ESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGP 96 (257)
Q Consensus 28 ~~~~~~~~~vi~~HG~~~~~-------~~~~~-~~---~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~ 96 (257)
+...++.|+||++||++... ..|.. +. +.|+.+||.|+.+|.||+|.+...... +.. ....-..
T Consensus 45 P~~~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG~g~S~g~~~~----~~~-~~~~~~~ 119 (615)
T 1mpx_A 45 PKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGDYVM----TRP-LRGPLNP 119 (615)
T ss_dssp ETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCSCCCT----TCC-CSBTTBC
T ss_pred CCCCCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCCCCCCCCcccc----ccc-ccccccc
Confidence 33335678999999988753 12332 33 667778999999999987643221100 000 0000000
Q ss_pred CchhhHHHHHHHHHHHhcc-CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-h-h-
Q 025121 97 EDWEGLDASAAHIANLLST-EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR-N-L- 172 (257)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~-~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~-~- 172 (257)
.......+..+.+..+.++ ...+.+|+++|+|+||++++.++.. .++.++++|.+++...... . +
T Consensus 120 ~g~~~~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~-----------~~~~l~a~v~~~~~~d~~~~~~~~ 188 (615)
T 1mpx_A 120 SEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTN-----------PHPALKVAVPESPMIDGWMGDDWF 188 (615)
T ss_dssp SSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTS-----------CCTTEEEEEEESCCCCTTTTSSSE
T ss_pred ccccHHHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhc-----------CCCceEEEEecCCccccccccccc
Confidence 0002223333333323333 2223499999999999999999874 3778888888877554211 0 0
Q ss_pred ----------hh------------------------------------cc----------------------ccchHHHh
Q 025121 173 ----------RN------------------------------------KI----------------------EGSHEAAR 184 (257)
Q Consensus 173 ----------~~------------------------------------~~----------------------~~~~~~~~ 184 (257)
.. .+ ........
T Consensus 189 ~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~w~~~Sp~~~~ 268 (615)
T 1mpx_A 189 NYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAAYDAFWQEQALDKVM 268 (615)
T ss_dssp ETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHHHHHHHTCSSCHHHHTTCHHHHH
T ss_pred cCCeehhhhHHHHHHhhcccCCcccccccchhHHHHHhhcCCccchhhhhccccchHHHHHHhCCCcChhhhhcChhhhh
Confidence 00 00 00111134
Q ss_pred hh--cCCCEEEEccCCCCcccchhhHHHHHHhhhcCce--eeEEEEecCCCCccCH-----------------H-HHHHH
Q 025121 185 RA--ASLPILLTHGLCDDVVPYKYGEKSANCLSISGFR--HLTFKSFEGLGHYTVP-----------------K-EMDEV 242 (257)
Q Consensus 185 ~~--~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~--~~~~~~~~g~~H~~~~-----------------~-~~~~~ 242 (257)
.. +++|+|+++|..|.. +...+.++++.++..+++ ..++++.|. +|.... . ..+.+
T Consensus 269 ~~~~I~~P~Lii~G~~D~~-~~~~~~~~~~aL~~~g~p~~~~~lvigp~-~H~~~~~~~~~~~~~~f~~~~~~~~~~~~~ 346 (615)
T 1mpx_A 269 ARTPLKVPTMWLQGLWDQE-DMWGAIHSYAAMEPRDKRNTLNYLVMGPW-RHSQVNYDGSALGALNFEGDTARQFRHDVL 346 (615)
T ss_dssp HTSCCCSCEEEEEETTCSS-CSSHHHHHHHHHGGGCTTSSSEEEEEESC-CTTGGGSCCSEETTEECSSCHHHHHHHHTH
T ss_pred hccCCCCCEEEeecccCcc-ccccHHHHHHHHHhhcCCCcCCEEEECCC-CCCCccccccccCccccCcccchhhhhhHH
Confidence 56 899999999999997 778889999999987641 378888887 786411 0 14678
Q ss_pred HHHHHHhcCcC
Q 025121 243 CNWLTARLGLE 253 (257)
Q Consensus 243 ~~~l~~~l~~~ 253 (257)
++|+.++|+..
T Consensus 347 ~~wfd~~Lkg~ 357 (615)
T 1mpx_A 347 RPFFDQYLVDG 357 (615)
T ss_dssp HHHHHHHHSTT
T ss_pred HHHHHHHhcCC
Confidence 99999998754
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.1e-15 Score=124.89 Aligned_cols=67 Identities=15% Similarity=0.251 Sum_probs=59.5
Q ss_pred hcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC-HHHHHHHHHHHHHhcCcC
Q 025121 186 AASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-PKEMDEVCNWLTARLGLE 253 (257)
Q Consensus 186 ~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~~l~~~l~~~ 253 (257)
..++|++++||++|+++|++.++++++.+++.|. +++++++++.+|... ......+++||.+.+..+
T Consensus 342 ~~~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~G~-~V~~~~y~~~~H~~~~~~~~~d~l~WL~~r~~G~ 409 (462)
T 3guu_A 342 VPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGA-NINFSPYPIAEHLTAEIFGLVPSLWFIKQAFDGT 409 (462)
T ss_dssp CCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTC-EEEEEEESSCCHHHHHHHTHHHHHHHHHHHHHTC
T ss_pred CCCCCEEEEeCCCCCcCCHHHHHHHHHHHHHcCC-CeEEEEECcCCccCchhhhHHHHHHHHHHHhCCC
Confidence 3568999999999999999999999999998887 899999999999876 456899999999987643
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=9.1e-17 Score=130.68 Aligned_cols=187 Identities=17% Similarity=0.102 Sum_probs=116.7
Q ss_pred CCceEEEEEccCCCCc-cchHHHhhcCCCC----ceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025121 32 KHQATIVWLHGLGDNG-SSWSQLLESLPLP----NIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~-~~~~~~~~~l~~~----g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
++.|+|+++||.+... ..+..+++.|+.. .+.|+++|.+++.. +. .+.. . ........+
T Consensus 195 ~~~PvlvllHG~~~~~~~~~~~~~~~l~~~g~~~p~iVV~~d~~~~~~------r~---~~~~-----~--~~~~~~~l~ 258 (403)
T 3c8d_A 195 EERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTH------RA---HELP-----C--NADFWLAVQ 258 (403)
T ss_dssp CCCCEEEESSHHHHHHTSCCHHHHHHHHHTTSSCSCEEEEECCCSHHH------HH---HHSS-----S--CHHHHHHHH
T ss_pred CCCCEEEEeCCHHHhhcCcHHHHHHHHHHcCCCCCeEEEEECCCCCcc------cc---ccCC-----C--hHHHHHHHH
Confidence 5679999999943211 1122334444333 45699999763100 00 0000 0 011112222
Q ss_pred HHHHHHhccC----CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-------hhhhc
Q 025121 107 AHIANLLSTE----PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR-------NLRNK 175 (257)
Q Consensus 107 ~~~~~~~~~~----~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~~~~~ 175 (257)
..+..++++. .+.++++|+|+||||.+++.++.+. ++.++++++++|.+.... .+...
T Consensus 259 ~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~-----------p~~f~~~~~~sg~~~~~~~~~~~~~~~~~~ 327 (403)
T 3c8d_A 259 QELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHW-----------PERFGCVLSQSGSYWWPHRGGQQEGVLLEK 327 (403)
T ss_dssp HTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHC-----------TTTCCEEEEESCCTTTTCTTSSSCCHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhC-----------chhhcEEEEeccccccCCCCCCcHHHHHHH
Confidence 3444444432 2335899999999999999999954 889999999998763211 11111
Q ss_pred cccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC--HHHHHHHHHHHHHhcC
Q 025121 176 IEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV--PKEMDEVCNWLTARLG 251 (257)
Q Consensus 176 ~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~~~l~ 251 (257)
+.. ........|+++++|+.|..+ .+.++++++.|++.|+ ++++.+++| +|... .+.+..++.||.+...
T Consensus 328 ~~~---~~~~~~~~~i~l~~G~~D~~~-~~~~~~l~~~L~~~G~-~v~~~~~~G-gH~~~~w~~~l~~~l~~l~~~~~ 399 (403)
T 3c8d_A 328 LKA---GEVSAEGLRIVLEAGIREPMI-MRANQALYAQLHPIKE-SIFWRQVDG-GHDALCWRGGLMQGLIDLWQPLF 399 (403)
T ss_dssp HHT---TSSCCCSCEEEEEEESSCHHH-HHHHHHHHHHTGGGTT-SEEEEEESC-CSCHHHHHHHHHHHHHHHHGGGT
T ss_pred HHh---ccccCCCceEEEEeeCCCchh-HHHHHHHHHHHHhCCC-CEEEEEeCC-CCCHHHHHHHHHHHHHHHhcccc
Confidence 100 001345678999999988654 5788999999999998 899999998 69864 4567778888876543
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.65 E-value=2.9e-15 Score=128.71 Aligned_cols=205 Identities=11% Similarity=0.033 Sum_probs=124.3
Q ss_pred CCCCCCceEEEEEccCCCCc-----c---chHHH---h-hcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCC-
Q 025121 28 RPKGKHQATIVWLHGLGDNG-----S---SWSQL---L-ESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDD- 94 (257)
Q Consensus 28 ~~~~~~~~~vi~~HG~~~~~-----~---~~~~~---~-~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~- 94 (257)
+...++.|+||++||++... . .|... . +.|+.+||.|+.+|.||+|.+. |.. -........
T Consensus 57 P~~~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG~g~S~--g~~----~~~~~~~~~~ 130 (652)
T 2b9v_A 57 PKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQ--GDY----VMTRPPHGPL 130 (652)
T ss_dssp ETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCC--SCC----CTTCCCSBTT
T ss_pred cCCCCCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCcCCCCC--Ccc----cccccccccc
Confidence 33335678999999987542 1 12221 2 6677789999999999775432 210 000000000
Q ss_pred CCCchhhHHHHHHHHHHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch--
Q 025121 95 GPEDWEGLDASAAHIANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR-- 170 (257)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-- 170 (257)
.........+..+. .+++.+. ..+.+|+++|+|+||++++.++.+. ++.++++|.+++......
T Consensus 131 ~~~g~~~~~D~~~~-i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~-----------~~~lka~v~~~~~~d~~~~d 198 (652)
T 2b9v_A 131 NPTKTDETTDAWDT-VDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDP-----------HPALKVAAPESPMVDGWMGD 198 (652)
T ss_dssp BCSSCCHHHHHHHH-HHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSC-----------CTTEEEEEEEEECCCTTTBS
T ss_pred cccccchhhHHHHH-HHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcC-----------CCceEEEEeccccccccccc
Confidence 00001222333333 3333332 2234999999999999999998743 678888887766443211
Q ss_pred h-----------hhhc------------------------c----------------------------------ccchH
Q 025121 171 N-----------LRNK------------------------I----------------------------------EGSHE 181 (257)
Q Consensus 171 ~-----------~~~~------------------------~----------------------------------~~~~~ 181 (257)
. +... + .....
T Consensus 199 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~yw~~~Sp~ 278 (652)
T 2b9v_A 199 DWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYPFWQRMHAHPAYDAFWQGQALD 278 (652)
T ss_dssp SSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGCHHHHHHHHCCSSSHHHHTTCHH
T ss_pred ceecCCchhhhhHHHHHHhhhcccCcccccccchHHHHHHhhcCchhhHHHhhccccchHHHHHHhCCCCChHHhcCChh
Confidence 0 0000 0 00111
Q ss_pred HHhhh--cCCCEEEEccCCCCcccchhhHHHHHHhhhcC--ceeeEEEEecCCCCccCH-----------------H-HH
Q 025121 182 AARRA--ASLPILLTHGLCDDVVPYKYGEKSANCLSISG--FRHLTFKSFEGLGHYTVP-----------------K-EM 239 (257)
Q Consensus 182 ~~~~~--~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~--~~~~~~~~~~g~~H~~~~-----------------~-~~ 239 (257)
..... +++|+|+++|..|.. +...+.++++.++..+ . ..++++.|. +|.... . ..
T Consensus 279 ~~~~~~~I~~PvLiv~G~~D~~-~~~~~~~~~~aL~~~g~~~-~~~lvigp~-~H~~~~~~~~~~~~~~f~~~~~~~~~~ 355 (652)
T 2b9v_A 279 KILAQRKPTVPMLWEQGLWDQE-DMWGAIHAWQALKDADVKA-PNTLVMGPW-RHSGVNYNGSTLGPLEFEGDTAHQYRR 355 (652)
T ss_dssp HHHHHHCCCSCEEEEEETTCSS-CSSHHHHHHHHHHHTTCSS-CEEEEEESC-CTTGGGSCCSEETTEECSSCHHHHHHH
T ss_pred hhhhcCCCCCCEEEEeecCCcc-ccccHHHHHHHHHhcCCCC-CCEEEECCC-CCCCcccccccCCccccccccchhhhh
Confidence 13456 899999999999997 6667889999999876 5 678888886 796421 1 15
Q ss_pred HHHHHHHHHhcCcC
Q 025121 240 DEVCNWLTARLGLE 253 (257)
Q Consensus 240 ~~~~~~l~~~l~~~ 253 (257)
+.+++|+.++|+..
T Consensus 356 ~~~~~wfd~~Lkg~ 369 (652)
T 2b9v_A 356 DVFRPFFDEYLKPG 369 (652)
T ss_dssp HTHHHHHHHHHSTT
T ss_pred hHHHHHHHHHhCCC
Confidence 77899999998754
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=99.64 E-value=6.6e-16 Score=119.52 Aligned_cols=102 Identities=17% Similarity=0.280 Sum_probs=71.4
Q ss_pred eEEEEEccCCCCc---cchHHHhhcCCCC--ceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 35 ATIVWLHGLGDNG---SSWSQLLESLPLP--NIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 35 ~~vi~~HG~~~~~---~~~~~~~~~l~~~--g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
++|||+||++++. ..|..+++.|++. |+.|+++|. |+|.+... ...|+ ..+.+.++.+
T Consensus 6 ~pvVllHG~~~~~~~~~~~~~~~~~L~~~~~g~~v~~~d~-G~g~s~~~---~~~~~-------------~~~~~~~~~~ 68 (279)
T 1ei9_A 6 LPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEI-GKTLREDV---ENSFF-------------LNVNSQVTTV 68 (279)
T ss_dssp CCEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCC-SSSHHHHH---HHHHH-------------SCHHHHHHHH
T ss_pred CcEEEECCCCCCCCCcccHHHHHHHHHHHCCCcEEEEEEe-CCCCcccc---ccccc-------------cCHHHHHHHH
Confidence 4699999999988 7899998888743 789999996 66532100 00111 1334555555
Q ss_pred HHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCccc-ccceEEEecc
Q 025121 110 ANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYV-NLRAVVGLSG 164 (257)
Q Consensus 110 ~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~ 164 (257)
.+.++... ...++.|+||||||.++..++.+. ++ ++..+|++++
T Consensus 69 ~~~l~~~~~l~~~~~lvGhSmGG~ia~~~a~~~-----------~~~~v~~lv~~~~ 114 (279)
T 1ei9_A 69 CQILAKDPKLQQGYNAMGFSQGGQFLRAVAQRC-----------PSPPMVNLISVGG 114 (279)
T ss_dssp HHHHHSCGGGTTCEEEEEETTHHHHHHHHHHHC-----------CSSCEEEEEEESC
T ss_pred HHHHHhhhhccCCEEEEEECHHHHHHHHHHHHc-----------CCcccceEEEecC
Confidence 55555421 114899999999999999999964 65 4899988875
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=99.63 E-value=1.3e-15 Score=120.43 Aligned_cols=186 Identities=17% Similarity=0.147 Sum_probs=116.3
Q ss_pred EEEEEcc--CCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 36 TIVWLHG--LGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 36 ~vi~~HG--~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
+|+++|| .+++...|..+++.|. .++.|+++|.|++|.+.... ......++.+.++.+.+.+
T Consensus 91 ~l~~~hg~g~~~~~~~~~~l~~~L~-~~~~v~~~d~~G~g~~~~~~---------------~~~~~~~~~~~a~~~~~~i 154 (319)
T 2hfk_A 91 VLVGCTGTAANGGPHEFLRLSTSFQ-EERDFLAVPLPGYGTGTGTG---------------TALLPADLDTALDAQARAI 154 (319)
T ss_dssp EEEEECCCCTTCSTTTTHHHHHTTT-TTCCEEEECCTTCCBC---C---------------BCCEESSHHHHHHHHHHHH
T ss_pred cEEEeCCCCCCCcHHHHHHHHHhcC-CCCceEEecCCCCCCCcccc---------------cCCCCCCHHHHHHHHHHHH
Confidence 8999998 6788888999999997 78999999999765321000 0011234455566665655
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh-hhhcc----------------
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN-LRNKI---------------- 176 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~---------------- 176 (257)
+......++.|+||||||.+|+.++.+.+.. +...++++++++++.+.... +...+
T Consensus 155 ~~~~~~~p~~l~G~S~GG~vA~~~A~~l~~~-------~g~~v~~lvl~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 227 (319)
T 2hfk_A 155 LRAAGDAPVVLLGHAGGALLAHELAFRLERA-------HGAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMS 227 (319)
T ss_dssp HHHHTTSCEEEEEETHHHHHHHHHHHHHHHH-------HSCCCSEEEEESCCCTTSCHHHHHTHHHHHHHHHHTCSSCCC
T ss_pred HHhcCCCCEEEEEECHHHHHHHHHHHHHHHh-------hCCCceEEEEeCCCCCCchhHHHHHHHHhhHHHHHhhccccc
Confidence 5433334899999999999999999864100 02468999998876543221 00000
Q ss_pred ----ccchH-------HHhhhcCCCEEEEccCCCCcccchh-hHHHHHHhhhcCceeeEEEEecCCCCccC-HHH----H
Q 025121 177 ----EGSHE-------AARRAASLPILLTHGLCDDVVPYKY-GEKSANCLSISGFRHLTFKSFEGLGHYTV-PKE----M 239 (257)
Q Consensus 177 ----~~~~~-------~~~~~~~~P~l~~~G~~D~~v~~~~-~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-~~~----~ 239 (257)
..... .....+++|+++++| .|..++.+. ...+.+.+. .+++++.+++ +|..+ .+. .
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~g-~D~~~~~~~~~~~~~~~~~----~~~~~~~v~g-~H~~~~~e~~~~~~ 301 (319)
T 2hfk_A 228 DARLLAMGRYARFLAGPRPGRSSAPVLLVRA-SEPLGDWQEERGDWRAHWD----LPHTVADVPG-DHFTMMRDHAPAVA 301 (319)
T ss_dssp HHHHHHHHHHHHHHHSCCCCCCCSCEEEEEE-SSCSSCCCGGGCCCSCCCS----SCSEEEEESS-CTTHHHHTCHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCCCCcCCCEEEEEc-CCCCCCccccccchhhcCC----CCCEEEEeCC-CcHHHHHHhHHHHH
Confidence 00000 012346789999999 999888765 333322221 1568999995 99853 233 3
Q ss_pred HHHHHHHHHhc
Q 025121 240 DEVCNWLTARL 250 (257)
Q Consensus 240 ~~~~~~l~~~l 250 (257)
+.+.+||.+..
T Consensus 302 ~~i~~~L~~~~ 312 (319)
T 2hfk_A 302 EAVLSWLDAIE 312 (319)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhcC
Confidence 55666665543
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=99.61 E-value=6.7e-16 Score=126.49 Aligned_cols=162 Identities=19% Similarity=0.207 Sum_probs=103.5
Q ss_pred CCceEEEEEccCCCCc-cchHH-HhhcCCC-CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNG-SSWSQ-LLESLPL-PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~-~~~~~-~~~~l~~-~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
+..++||++||++++. ..|.. +++.|.+ .+++|+++|+|++|.+.... .......+.+++..
T Consensus 68 ~~~~~vvllHG~~~s~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~~~---------------~~~~~~~~~~dl~~ 132 (432)
T 1gpl_A 68 LNRKTRFIIHGFTDSGENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQYSQ---------------ASQNIRVVGAEVAY 132 (432)
T ss_dssp TTSEEEEEECCTTCCTTSHHHHHHHHHHHHHCCEEEEEEECHHHHTSCHHH---------------HHHHHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCCCCchHHHHHHHHHHhcCCcEEEEEECccccCccchh---------------hHhhHHHHHHHHHH
Confidence 4578999999999998 57877 7777764 69999999988654321000 00012222333334
Q ss_pred HHHHhcc--CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhhh
Q 025121 109 IANLLST--EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRA 186 (257)
Q Consensus 109 ~~~~~~~--~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (257)
+.+.+.+ ....++++|+||||||.+|+.++.+. +.++++++++++..+........... ...
T Consensus 133 ~i~~l~~~~g~~~~~i~lvGhSlGg~vA~~~a~~~-----------p~~v~~iv~l~pa~p~~~~~~~~~~l-----~~~ 196 (432)
T 1gpl_A 133 LVQVLSTSLNYAPENVHIIGHSLGAHTAGEAGKRL-----------NGLVGRITGLDPAEPYFQDTPEEVRL-----DPS 196 (432)
T ss_dssp HHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTT-----------TTCSSEEEEESCBCTTTTTCCTTTSC-----CGG
T ss_pred HHHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhc-----------ccccceeEEeccccccccCCChhhcc-----CcC
Confidence 4444421 12245999999999999999999853 78899999998766543322111100 113
Q ss_pred cCCCEEEEccCCCCcccc-hhhHHHHHHhhhcCceeeEEEEecCCCCc
Q 025121 187 ASLPILLTHGLCDDVVPY-KYGEKSANCLSISGFRHLTFKSFEGLGHY 233 (257)
Q Consensus 187 ~~~P~l~~~G~~D~~v~~-~~~~~~~~~l~~~~~~~~~~~~~~g~~H~ 233 (257)
...++.++|+..|.+||. ... +.+. -.++..+|++||.
T Consensus 197 da~~V~vIHt~~d~lVP~~~~g--~~~~-------lg~~dfypngg~~ 235 (432)
T 1gpl_A 197 DAKFVDVIHTDISPILPSLGFG--MSQK-------VGHMDFFPNGGKD 235 (432)
T ss_dssp GSSEEEEECSCCSCHHHHCCCB--CSSC-------CSSEEEEEGGGSS
T ss_pred CCceEEEEEcCCcccccccccc--cccc-------ccceEEccCCCCC
Confidence 356899999999999987 211 1111 1245667888884
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=4.6e-14 Score=109.82 Aligned_cols=211 Identities=16% Similarity=0.100 Sum_probs=128.0
Q ss_pred CCCceEEEEEccCCCCccchHHHh---hcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCC--------Cch
Q 025121 31 GKHQATIVWLHGLGDNGSSWSQLL---ESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGP--------EDW 99 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~~~~---~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~--------~~~ 99 (257)
+++.|+|+++||.+++..+|.... +.+...+..++.+|...++.....+.. .+++.+....... ...
T Consensus 46 ~~~~PVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~~v~p~~~p~~~~~~~~~~--~~~~~g~~~~~y~d~~~~p~~~~~ 123 (299)
T 4fol_A 46 NKRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPE--GSWDFGQGAGFYLNATQEPYAQHY 123 (299)
T ss_dssp --CBCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEEECSSCCSTTSCCCTT--CCSSSBTTBCTTCBCCSHHHHTTC
T ss_pred CCCcCEEEEECCCCCChHHHHHhchHhHHHHHcCchhhccCCCcceeecCCCcc--cccccccCCccccccccCccccCc
Confidence 346799999999999998886532 233345788999886555443333211 1122111100000 001
Q ss_pred hhHHHHHHHHHHHhccC---------CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch
Q 025121 100 EGLDASAAHIANLLSTE---------PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR 170 (257)
Q Consensus 100 ~~~~~~~~~~~~~~~~~---------~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 170 (257)
......++.+..+++.. ...++.+|.||||||+.|+.++.++ ..+..+.++.++++......
T Consensus 124 ~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~---------~~~~~~~~~~s~s~~~~p~~ 194 (299)
T 4fol_A 124 QMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKG---------YSGKRYKSCSAFAPIVNPSN 194 (299)
T ss_dssp BHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHT---------GGGTCCSEEEEESCCCCGGG
T ss_pred cHHHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhC---------CCCCceEEEEecccccCccc
Confidence 11223344444444321 1124789999999999999999964 24678888888887654322
Q ss_pred hhhh--------------ccccchHHHh----hhcCCCEEEEccCCCCcccch-hhHHHHHHhhhcCce-eeEEEEecCC
Q 025121 171 NLRN--------------KIEGSHEAAR----RAASLPILLTHGLCDDVVPYK-YGEKSANCLSISGFR-HLTFKSFEGL 230 (257)
Q Consensus 171 ~~~~--------------~~~~~~~~~~----~~~~~P~l~~~G~~D~~v~~~-~~~~~~~~l~~~~~~-~~~~~~~~g~ 230 (257)
.... +......... .....++++-+|++|.+.... ..+.+.+.+++.+.+ .+++...||.
T Consensus 195 ~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~~i~id~G~~D~f~~~~l~~~~f~~a~~~~g~~~~~~~r~~~Gy 274 (299)
T 4fol_A 195 VPWGQKAFKGYLGEEKAQWEAYDPCLLIKNIRHVGDDRILIHVGDSDPFLEEHLKPELLLEAVKATSWQDYVEIKKVHGF 274 (299)
T ss_dssp SHHHHHHHHHHTC-----CGGGCHHHHGGGSCCCTTCCEEEEEETTCTTHHHHTCTHHHHHHHTTSTTTTCEEEEEETTC
T ss_pred ccccccccccccccchhhhhhcCHHHHHHhcccCCCCceEEEecCCCcchhhhcCHHHHHHHHHhcCCCceEEEEeCCCC
Confidence 1110 0000011111 123467999999999986543 236788888888762 3788999998
Q ss_pred CCcc--CHHHHHHHHHHHHHhcCc
Q 025121 231 GHYT--VPKEMDEVCNWLTARLGL 252 (257)
Q Consensus 231 ~H~~--~~~~~~~~~~~l~~~l~~ 252 (257)
+|.. ....+++.++|..+.|+.
T Consensus 275 dHsy~f~~~fi~dhl~fha~~Lgl 298 (299)
T 4fol_A 275 DHSYYFVSTFVPEHAEFHARNLGL 298 (299)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCC
Confidence 9974 477788999999988864
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=4.4e-15 Score=115.36 Aligned_cols=182 Identities=13% Similarity=0.047 Sum_probs=110.8
Q ss_pred CceEEEEEccCCCCc-cchH-HHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNG-SSWS-QLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~-~~~~-~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
..++|||+||++++. ..|. .+.+.|.+.||.|+++|+|++|.+. ......+..+.+.
T Consensus 64 ~~~pVVLvHG~~~~~~~~w~~~l~~~L~~~Gy~V~a~DlpG~G~~~---------------------~~~~~~~la~~I~ 122 (316)
T 3icv_A 64 VSKPILLVPGTGTTGPQSFDSNWIPLSAQLGYTPCWISPPPFMLND---------------------TQVNTEYMVNAIT 122 (316)
T ss_dssp CSSEEEEECCTTCCHHHHHTTTHHHHHHHTTCEEEEECCTTTTCSC---------------------HHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHHHCCCeEEEecCCCCCCCc---------------------HHHHHHHHHHHHH
Confidence 456899999999998 6787 8889998789999999999764211 0112233344444
Q ss_pred HHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh-------------hhhccc
Q 025121 111 NLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN-------------LRNKIE 177 (257)
Q Consensus 111 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------------~~~~~~ 177 (257)
.+++.... +++.|+||||||.++..++...+ ..+++++.+|++++....... ..+...
T Consensus 123 ~l~~~~g~-~~v~LVGHSmGGlvA~~al~~~p--------~~~~~V~~lV~lapp~~Gt~~a~l~~~~~~~~~a~~q~~~ 193 (316)
T 3icv_A 123 TLYAGSGN-NKLPVLTWSQGGLVAQWGLTFFP--------SIRSKVDRLMAFAPDYKGTVLAGPLDALAVSAPSVWQQTT 193 (316)
T ss_dssp HHHHHTTS-CCEEEEEETHHHHHHHHHHHHCG--------GGTTTEEEEEEESCCTTCBSCC------CCCCHHHHHTBT
T ss_pred HHHHHhCC-CceEEEEECHHHHHHHHHHHhcc--------ccchhhceEEEECCCCCCchhhhhhhhccccChhHHhhCC
Confidence 44443322 39999999999999977666421 025789999999875432211 111111
Q ss_pred cchH---HH---hhhcCCCEEEEccCCCCcccchh--hHHHHHHhhhcCceeeEEEEec-------CCCCccC---HHHH
Q 025121 178 GSHE---AA---RRAASLPILLTHGLCDDVVPYKY--GEKSANCLSISGFRHLTFKSFE-------GLGHYTV---PKEM 239 (257)
Q Consensus 178 ~~~~---~~---~~~~~~P~l~~~G~~D~~v~~~~--~~~~~~~l~~~~~~~~~~~~~~-------g~~H~~~---~~~~ 239 (257)
.... .. .....+|+..|+...|.+|.+.. .......+.. .+-+.+. ..+|.-+ +..+
T Consensus 194 gS~fl~~Ln~~~~~~~~v~~tsI~S~~D~iV~P~~~~g~~as~~L~g-----~~Ni~vqd~Cp~~~~~~H~~~~~dp~v~ 268 (316)
T 3icv_A 194 GSALTTALRNAGGLTQIVPTTNLYSATDEIVQPQVSNSPLDSSYLFN-----GKNVQAQAVCGPLFVIDHAGSLTSQFSY 268 (316)
T ss_dssp TCHHHHHHHHTTTTBCSSCEEEEECTTCSSSCCCCSSSTTSTTCCBT-----SEEEEHHHHHCTTCCCCTTHHHHBHHHH
T ss_pred CCHHHHHHhhcCCCCCCCcEEEEEcCCCCCccCCcccCcccceecCC-----CceEEEeccCCCCCccCCcCccCCHHHH
Confidence 1111 11 12346899999999999996544 1100112221 1333331 4689754 5566
Q ss_pred HHHHHHHHHh
Q 025121 240 DEVCNWLTAR 249 (257)
Q Consensus 240 ~~~~~~l~~~ 249 (257)
..+.+.|..-
T Consensus 269 ~~V~~aL~~~ 278 (316)
T 3icv_A 269 VVGRSALRST 278 (316)
T ss_dssp HHHHHHHHCT
T ss_pred HHHHHHhccC
Confidence 7777777654
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=2.9e-15 Score=122.31 Aligned_cols=183 Identities=14% Similarity=0.102 Sum_probs=113.0
Q ss_pred CCCceEEEEEccCCCCccchHHHhhcCCCCce---EEEccCCCCCCcc-----c--CCCCcc-cccccCC----------
Q 025121 31 GKHQATIVWLHGLGDNGSSWSQLLESLPLPNI---KWICPTAPTRPVA-----I--LGGFPC-TAWFDVG---------- 89 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~---~v~~~d~~~~g~~-----~--~~g~~~-~~w~~~~---------- 89 (257)
.+..++|||+||++++...|..+++.|.+.|| .|+++|++++|.+ . ..|... ..+....
T Consensus 19 ~~~~ppVVLlHG~g~s~~~w~~la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~~l~~v 98 (484)
T 2zyr_A 19 AEDFRPVVFVHGLAGSAGQFESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGLGSEFGLNISQIIDPETLDKI 98 (484)
T ss_dssp --CCCCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTGGGHHHHHHGGGSCHHHHHHH
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHcCCCcceEEEEECCCCCcccccccccccccccccccccccccccccccccc
Confidence 34567899999999999999999999988899 7999999987643 0 111100 0000000
Q ss_pred CCCCCCCCchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcc---cccceEEEeccCC
Q 025121 90 ELSDDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYY---VNLRAVVGLSGWL 166 (257)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~ 166 (257)
............+.+..+.+..++++... .++.|+||||||.+++.++.+. + .+++++|++++..
T Consensus 99 ~~~~~~~~~~~~~~dla~~L~~ll~~lg~-~kV~LVGHSmGG~IAl~~A~~~-----------Pe~~~~V~~LVlIapp~ 166 (484)
T 2zyr_A 99 LSKSRERLIDETFSRLDRVIDEALAESGA-DKVDLVGHSMGTFFLVRYVNSS-----------PERAAKVAHLILLDGVW 166 (484)
T ss_dssp HTSCHHHHHHHHHHHHHHHHHHHHHHHCC-SCEEEEEETHHHHHHHHHHHTC-----------HHHHHTEEEEEEESCCC
T ss_pred ccccccCchhhhHHHHHHHHHHHHHHhCC-CCEEEEEECHHHHHHHHHHHHC-----------ccchhhhCEEEEECCcc
Confidence 00000001122334444455555544333 4899999999999999999853 4 4899999998765
Q ss_pred CCchhhhhccccchHHHhhhcCCCEEEEccCCCCc--ccchhhHHHHHHhhhcCceeeEEEEecCCCCccC---HHHHHH
Q 025121 167 PGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDV--VPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV---PKEMDE 241 (257)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~~G~~D~~--v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~---~~~~~~ 241 (257)
... .....+++.+.|+.|.. +..... .++. +.+.+++++++|... ++..+.
T Consensus 167 ~~d---------------~p~g~~~L~ilG~~d~~p~V~~pss-----~L~~----ga~~v~i~~a~H~~ll~dp~v~~~ 222 (484)
T 2zyr_A 167 GVD---------------APEGIPTLAVFGNPKALPALGLPEE-----KVVY----NATNVYFNNMTHVQLCTSPETFAV 222 (484)
T ss_dssp SEE---------------CCTTSCEEEEEECGGGSCCSSCCSS-----CCEE----TSEEEEETTCCHHHHHHCHHHHHH
T ss_pred ccc---------------cCcCCHHHHHhCCCCcCCcccChhH-----hcCC----CceEEEECCCCccccccCHHHHHH
Confidence 411 11356788888866541 000000 1210 335667799999865 556778
Q ss_pred HHHHHHHh
Q 025121 242 VCNWLTAR 249 (257)
Q Consensus 242 ~~~~l~~~ 249 (257)
+.+||...
T Consensus 223 Vl~fL~~~ 230 (484)
T 2zyr_A 223 MFEFINGY 230 (484)
T ss_dssp HHHHHHSS
T ss_pred HHHHhccc
Confidence 88888753
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.55 E-value=7.9e-14 Score=118.61 Aligned_cols=201 Identities=11% Similarity=-0.057 Sum_probs=123.9
Q ss_pred CCCceEEeCCCCCCceEEEEEccCCCCccchHHH---h-hcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCC
Q 025121 20 EFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQL---L-ESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDG 95 (257)
Q Consensus 20 ~~~~~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~---~-~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~ 95 (257)
.+...++.+....+.|+||++||++.....+..+ + +.|+.+||.|+.+|.||+|.+. |. +.. .
T Consensus 21 ~L~~~~~~P~~~~~~P~vv~~~~~g~~~~~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~--g~-----~~~------~ 87 (587)
T 3i2k_A 21 RLAVDLYRPDADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASE--GE-----FVP------H 87 (587)
T ss_dssp EEEEEEEEECCSSCEEEEEEEESSCTTCHHHHHTTTCCTHHHHHTTCEEEEEECTTSTTCC--SC-----CCT------T
T ss_pred EEEEEEEECCCCCCeeEEEEECCcCCCccccccchhhHHHHHHHCCCEEEEEcCCCCCCCC--Cc-----ccc------c
Confidence 3333333344445779999999998876533332 3 6677799999999999876433 21 000 0
Q ss_pred CCchhhHHHHHHHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC-CCCchh--
Q 025121 96 PEDWEGLDASAAHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW-LPGSRN-- 171 (257)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~-- 171 (257)
....+++.++.+++.+. ..+.+|+++|+||||.+++.++.+. ++.++++|.+++. .+....
T Consensus 88 ----~~~~~D~~~~i~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~-----------~~~l~a~v~~~~~~~d~~~~~~ 152 (587)
T 3i2k_A 88 ----VDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSG-----------VGGLKAIAPSMASADLYRAPWY 152 (587)
T ss_dssp ----TTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTC-----------CTTEEEBCEESCCSCTCCCCCS
T ss_pred ----cchhHHHHHHHHHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhC-----------CCccEEEEEeCCccccccccee
Confidence 11123333333444332 2235999999999999999999853 6778888877665 321100
Q ss_pred -------------hhh---------------------------------c-----------------------cc-----
Q 025121 172 -------------LRN---------------------------------K-----------------------IE----- 177 (257)
Q Consensus 172 -------------~~~---------------------------------~-----------------------~~----- 177 (257)
+.. . +.
T Consensus 153 ~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 232 (587)
T 3i2k_A 153 GPGGALSVEALLGWSALIGTGLITSRSDARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQVVDHPDND 232 (587)
T ss_dssp CTTCCCCHHHHHHHHHHHHHHHHHHSSSCCTTHHHHHHHHHHHHTCHHHHHTCSSTTCCHHHHHHCTHHHHTTTTCCSCC
T ss_pred ecCCccccchHHHHHHHhhhhcccccccCCccchhhhhhhhhhhhHHHHHHhcCCcccchhccccchhHHhhhhcCCCCC
Confidence 000 0 00
Q ss_pred -----cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC----------H------
Q 025121 178 -----GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV----------P------ 236 (257)
Q Consensus 178 -----~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~----------~------ 236 (257)
.........+++|+|+++|-.|..++ ...++++.++..+. .++++-|. .|... +
T Consensus 233 ~yw~~~s~~~~l~~I~vPvL~v~Gw~D~~~~--~~~~~~~~l~~~~~--~~L~iGPw-~H~~~~~~~g~~~~g~~~~~~~ 307 (587)
T 3i2k_A 233 ESWQSISLFERLGGLATPALITAGWYDGFVG--ESLRTFVAVKDNAD--ARLVVGPW-SHSNLTGRNADRKFGIAATYPI 307 (587)
T ss_dssp HHHHTTCCHHHHTTCCCCEEEEEEEECTTHH--HHHHHHHHHTTTSC--EEEEEEEE-ETTBCSSEETTEECCGGGSCCH
T ss_pred hHHhcCChhhhhccCCCCEEEEccCCCccch--HHHHHHHHHhhcCC--CEEEECCc-cccCccccCCCcccCCcccccc
Confidence 00011345689999999999998764 36678888876542 26666664 56421 1
Q ss_pred -HHHHHHHHHHHHhcCcC
Q 025121 237 -KEMDEVCNWLTARLGLE 253 (257)
Q Consensus 237 -~~~~~~~~~l~~~l~~~ 253 (257)
+..+.+.+|+..+|+..
T Consensus 308 ~~~~~~~~~wFD~~Lkg~ 325 (587)
T 3i2k_A 308 QEATTMHKAFFDRHLRGE 325 (587)
T ss_dssp HHHHHHHHHHHHHHHSCC
T ss_pred chhhHHHHHHHHHHhcCC
Confidence 33488999999999754
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=2.7e-13 Score=114.17 Aligned_cols=205 Identities=10% Similarity=0.024 Sum_probs=123.4
Q ss_pred CCCCCceEEeCCCCCCceEEEEEccCCCCcc-chH----------------------HHhhcCCCCceEEEccCCCCCCc
Q 025121 18 TFEFGRTHVVRPKGKHQATIVWLHGLGDNGS-SWS----------------------QLLESLPLPNIKWICPTAPTRPV 74 (257)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~vi~~HG~~~~~~-~~~----------------------~~~~~l~~~g~~v~~~d~~~~g~ 74 (257)
+..+...++.+...++.|+||+.||++.+.. .+. ..++.|+.+||.|+++|.||+|.
T Consensus 51 G~~L~a~l~~P~~~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~Gy~vv~~D~RG~G~ 130 (560)
T 3iii_A 51 GEKLYINIFRPNKDGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDYVVVKVALRGSDK 130 (560)
T ss_dssp SCEEEEEEEECSSSSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGGTCEEEEEECTTSTT
T ss_pred CcEEEEEEEecCCCCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHhCCCEEEEEcCCCCCC
Confidence 3444444444544567899999999998742 111 12456778999999999998764
Q ss_pred ccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcc
Q 025121 75 AILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYY 153 (257)
Q Consensus 75 ~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~ 153 (257)
+. |. +. ........ ++.++.+++.+. ..+.+|+++|+|+||.+++.+|... +
T Consensus 131 S~--G~-----~~--------~~~~~~~~-D~~~~i~~l~~~~~~~~~igl~G~S~GG~~al~~a~~~-----------p 183 (560)
T 3iii_A 131 SK--GV-----LS--------PWSKREAE-DYYEVIEWAANQSWSNGNIGTNGVSYLAVTQWWVASLN-----------P 183 (560)
T ss_dssp CC--SC-----BC--------TTSHHHHH-HHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHTTC-----------C
T ss_pred CC--Cc-----cc--------cCChhHHH-HHHHHHHHHHhCCCCCCcEEEEccCHHHHHHHHHHhcC-----------C
Confidence 32 21 10 00112223 333333444333 2235999999999999999999853 7
Q ss_pred cccceEEEeccCCCCch------------h---hhh----------ccccch----------------HHHhhhcCCCEE
Q 025121 154 VNLRAVVGLSGWLPGSR------------N---LRN----------KIEGSH----------------EAARRAASLPIL 192 (257)
Q Consensus 154 ~~~~~~i~~~~~~~~~~------------~---~~~----------~~~~~~----------------~~~~~~~~~P~l 192 (257)
+.++++|..+++..... . ... ...... ......+++|+|
T Consensus 184 ~~l~aiv~~~~~~d~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~hp~~d~~W~~~~~~~~~I~vPvl 263 (560)
T 3iii_A 184 PHLKAMIPWEGLNDMYREVAFHGGIPDTGFYRFWTQGIFARWTDNPNIEDLIQAQQEHPLFDDFWKQRQVPLSQIKTPLL 263 (560)
T ss_dssp TTEEEEEEESCCCBHHHHTTEETTEECCSHHHHHHHHHHHHTTTCTTBCCHHHHHHHCCSSCHHHHTTBCCGGGCCSCEE
T ss_pred CceEEEEecCCcccccccceecCCCCchhHHHHHHhhhccccccccchHHHHHHHHHCCCcchHhhccCCchhhCCCCEE
Confidence 78999998887543211 0 000 000000 002457899999
Q ss_pred EEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCc---cCHHHHHHHHHHHHHhcCcC
Q 025121 193 LTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHY---TVPKEMDEVCNWLTARLGLE 253 (257)
Q Consensus 193 ~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~---~~~~~~~~~~~~l~~~l~~~ 253 (257)
++.|-.|..+......+.++.++.. +.-+++ .+.+|+ ...+..+...+|+..+|+..
T Consensus 264 ~v~Gw~D~~~~~~g~l~~y~~l~~~---~k~l~i-h~~~~~~~~~~~~~~~~~~~wfD~~LkG~ 323 (560)
T 3iii_A 264 TCASWSTQGLHNRGSFEGFKQAASE---EKWLYV-HGRKEWESYYARENLERQKSFFDFYLKEE 323 (560)
T ss_dssp EEEEGGGTTTTHHHHHHHHHHCCCS---SEEEEE-ESSCHHHHHHSHHHHHHHHHHHHHHTSCC
T ss_pred EeCCcCCCcccchhHHHHHHhcccc---CcEEEE-CCCCCcCcccChhHHHHHHHHHHHHhCCC
Confidence 9999999744444455566666643 223333 333443 33566788999999999754
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.4e-13 Score=108.69 Aligned_cols=133 Identities=13% Similarity=0.019 Sum_probs=90.7
Q ss_pred HHHHHHHhccCCC-CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-hhhhccccchHHH
Q 025121 106 AAHIANLLSTEPA-DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR-NLRNKIEGSHEAA 183 (257)
Q Consensus 106 ~~~~~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~ 183 (257)
...+..++++... ....+|+||||||..++.++.++ |+.+++++++||.+.... .+...... ....
T Consensus 122 ~~el~p~i~~~~~~~~~r~i~G~S~GG~~al~~~~~~-----------p~~F~~~~~~S~~~w~~~~~~~~~~~~-~~~~ 189 (331)
T 3gff_A 122 EKELAPSIESQLRTNGINVLVGHSFGGLVAMEALRTD-----------RPLFSAYLALDTSLWFDSPHYLTLLEE-RVVK 189 (331)
T ss_dssp HHTHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHTT-----------CSSCSEEEEESCCTTTTTTHHHHHHHH-HHHH
T ss_pred HHHHHHHHHHHCCCCCCeEEEEECHHHHHHHHHHHhC-----------chhhheeeEeCchhcCChHHHHHHHHH-Hhhc
Confidence 3444555554322 22458999999999999999954 899999999998553221 11111100 0011
Q ss_pred hhhcCCCEEEEccCCCC-------cccchhhHHHHHHhhhc---CceeeEEEEecCCCCccC-HHHHHHHHHHHHHhcC
Q 025121 184 RRAASLPILLTHGLCDD-------VVPYKYGEKSANCLSIS---GFRHLTFKSFEGLGHYTV-PKEMDEVCNWLTARLG 251 (257)
Q Consensus 184 ~~~~~~P~l~~~G~~D~-------~v~~~~~~~~~~~l~~~---~~~~~~~~~~~g~~H~~~-~~~~~~~~~~l~~~l~ 251 (257)
......|+++.+|+.|. .++.+.++++.+.|++. |+ ++++.++||.+|... ...+...++||-+...
T Consensus 190 ~~~~~~~l~l~~G~~d~~~~~~~~~~~~~~~~~l~~~Lk~~~~~g~-~~~~~~~pg~~H~sv~~~~~~~~l~~lf~~~~ 267 (331)
T 3gff_A 190 GDFKQKQLFMAIANNPLSPGFGVSSYHKDLNLAFADKLTKLAPKGL-GFMAKYYPEETHQSVSHIGLYDGIRHLFKDFA 267 (331)
T ss_dssp CCCSSEEEEEEECCCSEETTTEECCHHHHHHHHHHHHHHHHCCTTE-EEEEEECTTCCTTTHHHHHHHHHHHHHHGGGC
T ss_pred ccCCCCeEEEEeCCCCCCCccchHHHHHHHHHHHHHHHHhccCCCc-eEEEEECCCCCccccHHHHHHHHHHHHHhhcC
Confidence 12246799999999998 46777789999999876 55 789999999999765 4556667777766544
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=5.9e-14 Score=108.62 Aligned_cols=127 Identities=16% Similarity=0.128 Sum_probs=85.1
Q ss_pred HHHHHHhccCCC--CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-hhhhccccchHHH
Q 025121 107 AHIANLLSTEPA--DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR-NLRNKIEGSHEAA 183 (257)
Q Consensus 107 ~~~~~~~~~~~~--~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~ 183 (257)
+.+..++++... .++++|+||||||++++.++. . |+.++++++++|.+.... .+........ .
T Consensus 126 ~~l~~~i~~~~~~~~~r~~i~G~S~GG~~a~~~~~-----------~-p~~f~~~~~~s~~~~~~~~~~~~~~~~~~--~ 191 (278)
T 2gzs_A 126 TRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWL-----------S-SSYFRSYYSASPSLGRGYDALLSRVTAVE--P 191 (278)
T ss_dssp HTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHH-----------H-CSSCSEEEEESGGGSTTHHHHHHHHHTSC--T
T ss_pred HHHHHHHHHhccCCCCceEEEEECHHHHHHHHHHh-----------C-ccccCeEEEeCcchhcCcchHHHHHHHhh--c
Confidence 344445555432 247999999999999999998 4 778999999998654322 1111110000 0
Q ss_pred hhhcCCCEEEEccCCCCcc--------cchhhHHHHHHhhhcCceeeEEEEecCCCCccC-HHHHHHHHHHHHH
Q 025121 184 RRAASLPILLTHGLCDDVV--------PYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-PKEMDEVCNWLTA 248 (257)
Q Consensus 184 ~~~~~~P~l~~~G~~D~~v--------~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~~l~~ 248 (257)
......|+++.+|+.|... +.+.++++.+.|++.|+ ++++.+++|.+|... .+.+...++||.+
T Consensus 192 ~~~~~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~L~~~g~-~~~~~~~~g~~H~~~~~~~~~~~l~fl~~ 264 (278)
T 2gzs_A 192 LQFCTKHLAIMEGSATQGDNRETHAVGVLSKIHTTLTILKDKGV-NAVFWDFPNLGHGPMFNASFRQALLDISG 264 (278)
T ss_dssp TTTTTCEEEEEECCC-----------CHHHHHHHHHHHHHHTTC-CEEEEECTTCCHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCCcEEEEecCccccccccchhhhhHHHHHHHHHHHHcCCC-eeEEEEcCCCCccchhHHHHHHHHHHHhh
Confidence 0123568999999999864 36788999999999988 899999999899753 3444556667754
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=99.46 E-value=1.5e-13 Score=108.19 Aligned_cols=104 Identities=17% Similarity=0.131 Sum_probs=78.6
Q ss_pred CCceEEEEEccCCCCc------cchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025121 32 KHQATIVWLHGLGDNG------SSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~------~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
+.+++|||+||++++. ..|..+.+.|.+.||.|+++|.|++|.+.. . .....+.
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g~g~s~~-----------------~---~~~~~~l 65 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDG-----------------P---NGRGEQL 65 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCSSCCSSS-----------------T---TSHHHHH
T ss_pred CCCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCC-----------------C---CCCHHHH
Confidence 4567899999999888 778889999988899999999986543210 0 1233445
Q ss_pred HHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCC
Q 025121 106 AAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP 167 (257)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 167 (257)
++++.++++.... ++++|+||||||.++..++.+. ++++++++.+++...
T Consensus 66 ~~~i~~~l~~~~~-~~v~lvGHS~GG~va~~~a~~~-----------p~~V~~lV~i~~p~~ 115 (320)
T 1ys1_X 66 LAYVKTVLAATGA-TKVNLVGHSQGGLTSRYVAAVA-----------PDLVASVTTIGTPHR 115 (320)
T ss_dssp HHHHHHHHHHHCC-SCEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESCCTT
T ss_pred HHHHHHHHHHhCC-CCEEEEEECHhHHHHHHHHHhC-----------hhhceEEEEECCCCC
Confidence 5555555554332 3899999999999999999854 788999999987543
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=1.1e-13 Score=113.76 Aligned_cols=111 Identities=20% Similarity=0.210 Sum_probs=75.8
Q ss_pred CCceEEEEEccCCCCc-cchHH-HhhcCCC-CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNG-SSWSQ-LLESLPL-PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~-~~~~~-~~~~l~~-~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
+..|+||++||++++. ..|.. +++.|.+ .+|+|+++|++++|.+.... .......+.+++..
T Consensus 68 ~~~p~vvliHG~~~~~~~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~~---------------~~~~~~~~~~dl~~ 132 (452)
T 1bu8_A 68 LDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQ---------------ASYNTRVVGAEIAF 132 (452)
T ss_dssp TTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHHH---------------HHHHHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCCCCchHHHHHHHHHHhhCCCEEEEEechhcccCchhH---------------hHhhHHHHHHHHHH
Confidence 4568999999999988 67887 6676653 49999999998765322100 00112223333333
Q ss_pred HHHHhcc--CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCC
Q 025121 109 IANLLST--EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPG 168 (257)
Q Consensus 109 ~~~~~~~--~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 168 (257)
+.+.+.+ ....++++|+||||||.+|+.++.+. +.++++++++++..|.
T Consensus 133 li~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~-----------p~~v~~iv~ldpa~p~ 183 (452)
T 1bu8_A 133 LVQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRL-----------EGHVGRITGLDPAEPC 183 (452)
T ss_dssp HHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHT-----------TTCSSEEEEESCBCTT
T ss_pred HHHHHHHhcCCCccceEEEEEChhHHHHHHHHHhc-----------ccccceEEEecCCccc
Confidence 3343321 12235999999999999999999964 8889999999876554
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=99.43 E-value=1.1e-13 Score=113.90 Aligned_cols=111 Identities=22% Similarity=0.194 Sum_probs=75.3
Q ss_pred CCceEEEEEccCCCCc-cchHH-HhhcCCC-CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNG-SSWSQ-LLESLPL-PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~-~~~~~-~~~~l~~-~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
...|+||++||++++. ..|.. +++.|.+ .+|+|+++|++++|.+.... .......+.+++..
T Consensus 68 ~~~p~vvliHG~~~~~~~~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~~---------------~~~~~~~~~~dl~~ 132 (452)
T 1w52_X 68 SSRKTHFVIHGFRDRGEDSWPSDMCKKILQVETTNCISVDWSSGAKAEYTQ---------------AVQNIRIVGAETAY 132 (452)
T ss_dssp TTSCEEEEECCTTCCSSSSHHHHHHHHHHTTSCCEEEEEECHHHHTSCHHH---------------HHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCCCchHHHHHHHHHHhhCCCEEEEEecccccccccHH---------------HHHhHHHHHHHHHH
Confidence 4568999999999988 67877 6677654 49999999998765321100 00012223333333
Q ss_pred HHHHhcc--CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCC
Q 025121 109 IANLLST--EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPG 168 (257)
Q Consensus 109 ~~~~~~~--~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 168 (257)
+.+.+.+ ....++++|+||||||.+|..++.+. +.++++++++++..|.
T Consensus 133 ~i~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~-----------p~~v~~iv~ldpa~p~ 183 (452)
T 1w52_X 133 LIQQLLTELSYNPENVHIIGHSLGAHTAGEAGRRL-----------EGRVGRVTGLDPAEPC 183 (452)
T ss_dssp HHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHT-----------TTCSSEEEEESCBCTT
T ss_pred HHHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhc-----------ccceeeEEeccccccc
Confidence 3333321 12235999999999999999999964 7889999999876553
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=99.42 E-value=2.7e-13 Score=105.29 Aligned_cols=100 Identities=13% Similarity=0.106 Sum_probs=76.1
Q ss_pred CCceEEEEEccCCCCcc-----chHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025121 32 KHQATIVWLHGLGDNGS-----SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~-----~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
+.+++|||+||++++.. .|..+.+.|.+.||.|+++|.|+++.+ .....+.+
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g~g~s-----------------------~~~~~~~~ 61 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTS-----------------------EVRGEQLL 61 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSSCH-----------------------HHHHHHHH
T ss_pred CCCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCCCCCc-----------------------hhhHHHHH
Confidence 45678999999988754 788888998878999999998864321 12334455
Q ss_pred HHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCC
Q 025121 107 AHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWL 166 (257)
Q Consensus 107 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 166 (257)
+++..+++.... .++.|+||||||.++..++.+. +++++++|++++..
T Consensus 62 ~~i~~~~~~~~~-~~v~lvGhS~GG~~a~~~a~~~-----------p~~v~~lv~i~~p~ 109 (285)
T 1ex9_A 62 QQVEEIVALSGQ-PKVNLIGHSHGGPTIRYVAAVR-----------PDLIASATSVGAPH 109 (285)
T ss_dssp HHHHHHHHHHCC-SCEEEEEETTHHHHHHHHHHHC-----------GGGEEEEEEESCCT
T ss_pred HHHHHHHHHhCC-CCEEEEEECHhHHHHHHHHHhC-----------hhheeEEEEECCCC
Confidence 555555554332 3999999999999999999854 78899999998753
|
| >2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.41 E-value=6.1e-12 Score=99.17 Aligned_cols=101 Identities=13% Similarity=0.143 Sum_probs=73.4
Q ss_pred CCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 30 KGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 30 ~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
.....++|+++||++++...|..+.+.|. +.|+.+|.|+. ....++.+.++.+
T Consensus 42 ~~~~~~~l~~~hg~~g~~~~~~~~~~~l~---~~v~~~~~~~~------------------------~~~~~~~~~a~~~ 94 (316)
T 2px6_A 42 VQSSERPLFLVHPIEGSTTVFHSLASRLS---IPTYGLQCTRA------------------------APLDSIHSLAAYY 94 (316)
T ss_dssp CCCSSCCEEEECCTTCCSGGGHHHHHHCS---SCEEEECCCTT------------------------SCTTCHHHHHHHH
T ss_pred CCCCCCeEEEECCCCCCHHHHHHHHHhcC---CCEEEEECCCC------------------------CCcCCHHHHHHHH
Confidence 34456789999999999999999999985 88999987610 0123456677777
Q ss_pred HHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccc---cceEEEeccC
Q 025121 110 ANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVN---LRAVVGLSGW 165 (257)
Q Consensus 110 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~ 165 (257)
.+.+.......++.++||||||.++..++.+... .... +..++++++.
T Consensus 95 ~~~i~~~~~~~~~~l~G~S~Gg~va~~~a~~l~~--------~g~~~p~v~~l~li~~~ 145 (316)
T 2px6_A 95 IDCIRQVQPEGPYRVAGYSYGACVAFEMCSQLQA--------QQSPAPTHNSLFLFDGS 145 (316)
T ss_dssp HHHHTTTCSSCCCEEEEETHHHHHHHHHHHHHHH--------HC---CCCCEEEEESCS
T ss_pred HHHHHHhCCCCCEEEEEECHHHHHHHHHHHHHHH--------cCCcccccceEEEEcCC
Confidence 7777765444589999999999999999986411 0123 7777777654
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=99.40 E-value=2.2e-13 Score=107.78 Aligned_cols=112 Identities=16% Similarity=0.223 Sum_probs=76.7
Q ss_pred CCCceEEEEEccCCCC----------ccch----HHHhhcCCCCceE---EEccCCCCCCcccCCCCcccccccCCCCCC
Q 025121 31 GKHQATIVWLHGLGDN----------GSSW----SQLLESLPLPNIK---WICPTAPTRPVAILGGFPCTAWFDVGELSD 93 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~----------~~~~----~~~~~~l~~~g~~---v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~ 93 (257)
....++|||+||++++ ...| ..+++.|.++||. |+++|+++++.+.....
T Consensus 37 ~~~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~~~------------- 103 (342)
T 2x5x_A 37 TATKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLSSSEQGSAQY------------- 103 (342)
T ss_dssp CCCSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSCHHHHTCGGG-------------
T ss_pred CCCCCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCCCCccCCccc-------------
Confidence 3445679999999994 4578 7888888878998 99999997654321100
Q ss_pred CCCCchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCC
Q 025121 94 DGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWL 166 (257)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 166 (257)
.........+..+.+..+++.... +++.|+||||||.++..++.+. ..+++++++|++++..
T Consensus 104 -~~~~~~~~~~l~~~I~~l~~~~g~-~~v~LVGHSmGG~iA~~~a~~~---------~~p~~V~~lVlla~p~ 165 (342)
T 2x5x_A 104 -NYHSSTKYAIIKTFIDKVKAYTGK-SQVDIVAHSMGVSMSLATLQYY---------NNWTSVRKFINLAGGI 165 (342)
T ss_dssp -CCBCHHHHHHHHHHHHHHHHHHTC-SCEEEEEETHHHHHHHHHHHHH---------TCGGGEEEEEEESCCT
T ss_pred -cCCHHHHHHHHHHHHHHHHHHhCC-CCEEEEEECHHHHHHHHHHHHc---------CchhhhcEEEEECCCc
Confidence 011133344445555555444322 3999999999999999999853 1267899999988753
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=1.8e-12 Score=101.53 Aligned_cols=123 Identities=14% Similarity=0.099 Sum_probs=85.0
Q ss_pred CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccc-eEEEeccCC--CCch-----hhhhccccc--hHH------
Q 025121 119 DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLR-AVVGLSGWL--PGSR-----NLRNKIEGS--HEA------ 182 (257)
Q Consensus 119 ~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~--~~~~-----~~~~~~~~~--~~~------ 182 (257)
.++|+|.|+|+||++++.++.. +++.++ +++++++.. .... .+...+... ...
T Consensus 10 ~~RI~v~G~S~GG~mA~~~a~~-----------~p~~fa~g~~v~ag~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (318)
T 2d81_A 10 PNSVSVSGLASGGYMAAQLGVA-----------YSDVFNVGFGVFAGGPYDCARNQYYTSCMYNGYPSITTPTANMKSWS 78 (318)
T ss_dssp EEEEEEEEETHHHHHHHHHHHH-----------TTTTSCSEEEEESCCCTTTTSSSCGGGGSTTCCCCCHHHHHHHHHHB
T ss_pred cceEEEEEECHHHHHHHHHHHH-----------CchhhhccceEEecccccccchHHHHHHhhccCCCCCCHHHHHHHhh
Confidence 3599999999999999999885 488898 877776521 1110 000000000 000
Q ss_pred ------HhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCc-eeeEEEEecCCCCccC--------------------
Q 025121 183 ------ARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGF-RHLTFKSFEGLGHYTV-------------------- 235 (257)
Q Consensus 183 ------~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~-~~~~~~~~~g~~H~~~-------------------- 235 (257)
.......|++++||+.|.+||++.++++++.+++.+. .++++++++|++|.+.
T Consensus 79 ~~~i~~~~~l~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~~~~~~~~~c~~~~~pyi~ 158 (318)
T 2d81_A 79 GNQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTSPYIS 158 (318)
T ss_dssp TTTBCCGGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSCCTTCCCTTSCCTTCEE
T ss_pred cccCChhHcCCCCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceEEEEeCCCCCCCccCCcccCccccccCCCCccc
Confidence 0011347999999999999999999999999998763 2689999999999753
Q ss_pred ---HHHHHHHHHHHHHhcCc
Q 025121 236 ---PKEMDEVCNWLTARLGL 252 (257)
Q Consensus 236 ---~~~~~~~~~~l~~~l~~ 252 (257)
.+....|++||...+..
T Consensus 159 ~~~~d~~~~i~~ff~g~~~~ 178 (318)
T 2d81_A 159 NCNYDGAGAALKWIYGSLNA 178 (318)
T ss_dssp ECSSCHHHHHHHHHHSSCCC
T ss_pred CCCChHHHHHHHHHhccCCC
Confidence 12346788998765543
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=99.36 E-value=7e-13 Score=108.59 Aligned_cols=111 Identities=20% Similarity=0.284 Sum_probs=72.1
Q ss_pred CCceEEEEEccCCCCcc-chHH-HhhcC-CCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGS-SWSQ-LLESL-PLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~-~~~~-~~~~l-~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
...|+||++||++++.. .|.. +.+.| ...+++|+++|+++++.+. +.. .......+.+.+..
T Consensus 68 ~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~---------y~~------~~~~~~~~a~~l~~ 132 (450)
T 1rp1_A 68 TDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQTS---------YTQ------AANNVRVVGAQVAQ 132 (450)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSSC---------HHH------HHHHHHHHHHHHHH
T ss_pred CCCCeEEEEccCCCCCCcchHHHHHHHHHhcCCeEEEEEeCccccCCc---------chH------HHHHHHHHHHHHHH
Confidence 45689999999998876 6866 55554 4458999999988643211 000 00012223333334
Q ss_pred HHHHhc-c-CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc
Q 025121 109 IANLLS-T-EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS 169 (257)
Q Consensus 109 ~~~~~~-~-~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 169 (257)
+.+.+. + ....++++|+||||||.+|..++.+. +. +.+++++.+..|..
T Consensus 133 ll~~L~~~~g~~~~~v~LVGhSlGg~vA~~~a~~~-----------p~-v~~iv~Ldpa~p~f 183 (450)
T 1rp1_A 133 MLSMLSANYSYSPSQVQLIGHSLGAHVAGEAGSRT-----------PG-LGRITGLDPVEASF 183 (450)
T ss_dssp HHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTS-----------TT-CCEEEEESCCCTTT
T ss_pred HHHHHHHhcCCChhhEEEEEECHhHHHHHHHHHhc-----------CC-cccccccCcccccc
Confidence 444432 1 12235999999999999999999853 66 99999888765543
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=99.35 E-value=8.4e-13 Score=108.11 Aligned_cols=111 Identities=19% Similarity=0.275 Sum_probs=74.2
Q ss_pred CCceEEEEEccCCCCc-cchHH-HhhcC-CCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNG-SSWSQ-LLESL-PLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~-~~~~~-~~~~l-~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
...|+||++||++++. ..|.. +++.| ...+++|+++|++++|.+.... .......+.+.+..
T Consensus 67 ~~~p~vvliHG~~~s~~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~~---------------~~~~~~~v~~~la~ 131 (449)
T 1hpl_A 67 TGRKTRFIIHGFIDKGEESWLSTMCQNMFKVESVNCICVDWKSGSRTAYSQ---------------ASQNVRIVGAEVAY 131 (449)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHHHHCCEEEEEEECHHHHSSCHHH---------------HHHHHHHHHHHHHH
T ss_pred CCCCeEEEEecCCCCCCccHHHHHHHHHHhcCCeEEEEEeCCcccCCccHH---------------HHHHHHHHHHHHHH
Confidence 4568999999999885 57876 66665 3368999999998754321000 00012223333444
Q ss_pred HHHHhc-c-CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCC
Q 025121 109 IANLLS-T-EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPG 168 (257)
Q Consensus 109 ~~~~~~-~-~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 168 (257)
+.+.+. + ....++++|+||||||.+|..++.+. +.++++++++.+..|.
T Consensus 132 ll~~L~~~~g~~~~~v~LIGhSlGg~vA~~~a~~~-----------p~~v~~iv~Ldpa~p~ 182 (449)
T 1hpl_A 132 LVGVLQSSFDYSPSNVHIIGHSLGSHAAGEAGRRT-----------NGAVGRITGLDPAEPC 182 (449)
T ss_dssp HHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHT-----------TTCSSEEEEESCBCTT
T ss_pred HHHHHHHhcCCCcccEEEEEECHhHHHHHHHHHhc-----------chhcceeeccCccccc
Confidence 444442 1 12335999999999999999999964 7889999998876554
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=2.4e-10 Score=90.90 Aligned_cols=205 Identities=12% Similarity=0.050 Sum_probs=114.4
Q ss_pred CCCCceEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCC----CCCCcccCCCCcccccccCCCCCCC
Q 025121 19 FEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTA----PTRPVAILGGFPCTAWFDVGELSDD 94 (257)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~----~~~g~~~~~g~~~~~w~~~~~~~~~ 94 (257)
..+...++++....+.|+||.+||.. + ....||.++.++. +..+ +.+.|++. .|+....
T Consensus 123 ~sf~~~i~lP~g~~P~Pvii~~~~~~-----~------~~~~G~A~i~f~~~~va~d~~-~gsrG~g~--f~~ly~~--- 185 (433)
T 4g4g_A 123 ISFSASIRKPSGAGPFPAIIGIGGAS-----I------PIPSNVATITFNNDEFGAQMG-SGSRGQGK--FYDLFGR--- 185 (433)
T ss_dssp EEEEEEEECCSSSCCEEEEEEESCCC-----S------CCCTTSEEEEECHHHHSCCSS-GGGTTCSH--HHHHHCT---
T ss_pred EEEEEEEECCCCCCCccEEEEECCCc-----c------ccCCCeEEEEeCCcccccccC-CCcCCccc--cccccCC---
Confidence 34455555565556778899898732 1 1357999999874 1111 01122221 1222111
Q ss_pred CCCchhhHHH---HHHHHHHHhcc------CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025121 95 GPEDWEGLDA---SAAHIANLLST------EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 95 ~~~~~~~~~~---~~~~~~~~~~~------~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
..+...+.. .+..+.++++. ..+.+||+++|||+||..++.+++. .++|+++|..++.
T Consensus 186 -~~~~gal~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~------------D~Ri~~vi~~~sg 252 (433)
T 4g4g_A 186 -DHSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGAL------------VDRIALTIPQESG 252 (433)
T ss_dssp -TCSCCHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHH------------CTTCSEEEEESCC
T ss_pred -ccchHHHHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhc------------CCceEEEEEecCC
Confidence 112222222 22223344433 4445699999999999999999985 6789999887653
Q ss_pred CCCchhhh----------------------hcc-------c--------cchHHHhhhcCCCEEEEccCCCCcccchhhH
Q 025121 166 LPGSRNLR----------------------NKI-------E--------GSHEAARRAASLPILLTHGLCDDVVPYKYGE 208 (257)
Q Consensus 166 ~~~~~~~~----------------------~~~-------~--------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~ 208 (257)
......+. .++ . ............|++++.| +|..++++...
T Consensus 253 ~~G~~~~R~~~~~~~~Ge~v~~~~~~~ge~~Wf~~~f~~y~~~~~~LPfD~heL~ALiAPRPlLv~~g-~D~w~~p~g~~ 331 (433)
T 4g4g_A 253 AGGAACWRISDQQKAAGANIQTAAQIITENPWFSRNFDPHVNSITSVPQDHHLLAALIVPRGLAVFEN-NIDWLGPVSTT 331 (433)
T ss_dssp TTTTSCHHHHHHHHHTTCCCCCHHHHTTTCCCSCTTTGGGTTCGGGSSCCGGGHHHHHTTSEEEEEEC-CCTTTCHHHHH
T ss_pred CCchhhhhhchhhcccCcchhhhhcccCCccccchhhHhhccccccCCcCHHHHHHhhCCceEEEecC-CCCcCCcHHHH
Confidence 22111000 000 0 0112223334678999999 88887776443
Q ss_pred HHHHHh----hhcCc-eeeEEEEecCCCCc-cCHHHHHHHHHHHHHhcCcCC
Q 025121 209 KSANCL----SISGF-RHLTFKSFEGLGHY-TVPKEMDEVCNWLTARLGLEG 254 (257)
Q Consensus 209 ~~~~~l----~~~~~-~~~~~~~~~g~~H~-~~~~~~~~~~~~l~~~l~~~~ 254 (257)
.....+ +..|. .++.+...+|-+|. +..+..+.+.+||+++|....
T Consensus 332 ~a~~aa~~VY~~lGa~d~l~~~~~ggH~Hc~fp~~~r~~~~~F~~k~Lkg~~ 383 (433)
T 4g4g_A 332 GCMAAGRLIYKAYGVPNNMGFSLVGGHNHCQFPSSQNQDLNSYINYFLLGQG 383 (433)
T ss_dssp HHHHHHHHHHHHHTCGGGEEEEECCSSCTTCCCGGGHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHHHHcCCccceEEEeeCCCCcccCCHHHHHHHHHHHHHHhCCCC
Confidence 222222 22232 25677665555664 455677999999999997653
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=99.23 E-value=2.5e-11 Score=101.00 Aligned_cols=187 Identities=16% Similarity=0.041 Sum_probs=110.5
Q ss_pred CCceEEEEEccCC---CCccchHHHhhcCCCC-ceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025121 32 KHQATIVWLHGLG---DNGSSWSQLLESLPLP-NIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 32 ~~~~~vi~~HG~~---~~~~~~~~~~~~l~~~-g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
.+.|+||++||.+ ++...+......|+.. ++.|+.+|+|.-..+.... ..+. ..........+....++
T Consensus 95 ~~~PviV~iHGGg~~~g~~~~~~~~~~~la~~g~~vvv~~nYRlg~~Gf~~~----~~~~---~~~~~n~gl~D~~~al~ 167 (489)
T 1qe3_A 95 QNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHL----SSFD---EAYSDNLGLLDQAAALK 167 (489)
T ss_dssp CSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCC----TTTC---TTSCSCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCccccCCCCCcccCHHHHHhcCCEEEEecCccCcccccCcc----cccc---ccCCCCcchHHHHHHHH
Confidence 3479999999965 3433333334455544 4999999987321111000 0000 00111122334444555
Q ss_pred HHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh---------hhhc--
Q 025121 108 HIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN---------LRNK-- 175 (257)
Q Consensus 108 ~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---------~~~~-- 175 (257)
++.+.+.... +.++|.|+|+|+||.++..++... ..+..++++|+.+|..+.... +...
T Consensus 168 wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~---------~~~~lf~~~i~~sg~~~~~~~~~~~~~~~~~~~~~g 238 (489)
T 1qe3_A 168 WVRENISAFGGDPDNVTVFGESAGGMSIAALLAMP---------AAKGLFQKAIMESGASRTMTKEQAASTAAAFLQVLG 238 (489)
T ss_dssp HHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCG---------GGTTSCSEEEEESCCCCCBCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCc---------cccchHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 5555554432 345999999999999998887642 124678999999986532110 0000
Q ss_pred --------cccc-hHH---Hhh------hcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC
Q 025121 176 --------IEGS-HEA---ARR------AASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV 235 (257)
Q Consensus 176 --------~~~~-~~~---~~~------~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 235 (257)
++.. ... ... ....|.+.+++..|..+.++...++.+..+..++ ++.+-..++.+|.+.
T Consensus 239 ~~~~~~~~Lr~~~~~~l~~~~~~~~~~~~~~~~~~~~~p~~D~~~~~~~~~~~~~~~~~~~v-p~~~g~~~~Eg~~~~ 315 (489)
T 1qe3_A 239 INESQLDRLHTVAAEDLLKAADQLRIAEKENIFQLFFQPALDPKTLPEEPEKSIAEGAASGI-PLLIGTTRDEGYLFF 315 (489)
T ss_dssp CCTTCGGGGGTSCHHHHHHHHHHHHTSTTCCTTSCSSCCBCBTTTBCSCHHHHHHTTTTTTC-CEEEEEETTGGGGTC
T ss_pred CCHHHHHHHHcCCHHHHHHHHHHhhhccccccCCccceEeECCeecCcCHHHHHhcCCCCCC-CEEEeeecchhHhhc
Confidence 0000 000 000 1234578889999998888888888888777766 778888899899765
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=99.21 E-value=3.7e-10 Score=88.77 Aligned_cols=204 Identities=12% Similarity=0.068 Sum_probs=113.5
Q ss_pred CCCCceEEeCCC-CCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCC----CCCCcccCCCCcccccccCCCCCC
Q 025121 19 FEFGRTHVVRPK-GKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTA----PTRPVAILGGFPCTAWFDVGELSD 93 (257)
Q Consensus 19 ~~~~~~~~~~~~-~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~----~~~g~~~~~g~~~~~w~~~~~~~~ 93 (257)
..+...++.+.. ..+.|+||.+||.. .....||.++.++. +..+. .+.|++. .++....
T Consensus 90 ~~~~~~i~lP~~~~~p~Pvii~i~~~~-----------~~~~~G~a~~~~~~~~v~~~~~~-gs~g~g~--f~~ly~~-- 153 (375)
T 3pic_A 90 ISFTVTITYPSSGTAPYPAIIGYGGGS-----------LPAPAGVAMINFNNDNIAAQVNT-GSRGQGK--FYDLYGS-- 153 (375)
T ss_dssp EEEEEEEECCSSSCSSEEEEEEETTCS-----------SCCCTTCEEEEECHHHHSCCSSG-GGTTCSH--HHHHHCT--
T ss_pred eEEEEEEECCCCCCCCccEEEEECCCc-----------cccCCCeEEEEecccccccccCC-CCcccee--cccccCC--
Confidence 344445555544 45678899999831 11347999988863 11000 0112221 1212111
Q ss_pred CCCCchhhHHH---HHHHHHHHhcc----CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCC
Q 025121 94 DGPEDWEGLDA---SAAHIANLLST----EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWL 166 (257)
Q Consensus 94 ~~~~~~~~~~~---~~~~~~~~~~~----~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 166 (257)
......+.. .+..+.++++. ..+.+||+++|||+||..++.+++. .++|+.+|..++..
T Consensus 154 --~~~~gal~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~------------D~Ri~~~v~~~~g~ 219 (375)
T 3pic_A 154 --SHSAGAMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAF------------EKRIVLTLPQESGA 219 (375)
T ss_dssp --TCSCCHHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHH------------CTTEEEEEEESCCT
T ss_pred --ccchHHHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhc------------CCceEEEEeccCCC
Confidence 112223322 23334445543 3344699999999999999999985 67899998876432
Q ss_pred CCchhhh----------------------hcc----c-----------cchHHHhhhcCCCEEEEccCCCCcccchhhHH
Q 025121 167 PGSRNLR----------------------NKI----E-----------GSHEAARRAASLPILLTHGLCDDVVPYKYGEK 209 (257)
Q Consensus 167 ~~~~~~~----------------------~~~----~-----------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~ 209 (257)
.....+. .++ . ............|+|++.| +|..++++....
T Consensus 220 ~G~~~~R~~~~~~~~Ge~v~~~~~~~~e~~Wf~~~~~~y~~~~~~lP~D~h~L~ALiAPRPllv~~g-~D~w~~~~g~~~ 298 (375)
T 3pic_A 220 GGSACWRISDYLKSQGANIQTASEIIGEDPWFSTTFNSYVNQVPVLPFDHHSLAALIAPRGLFVIDN-NIDWLGPQSCFG 298 (375)
T ss_dssp TTTSCHHHHHHHHHTTCCCCCHHHHTTTCSCSCGGGGGTTTCGGGSSCCHHHHHHTSTTSEEEEECC-CCGGGCHHHHHH
T ss_pred CchhhhhhhhhhcccCccccccccccCcccccccchhhhcccccccCcCHHHHHHHhCCceEEEecC-CCcccCcHHHHH
Confidence 1111000 000 0 0012222334678999999 998888765433
Q ss_pred HHHHh----hhcCc-eeeEEEEecCCCC-ccCHHHHHHHHHHHHHhcCcC
Q 025121 210 SANCL----SISGF-RHLTFKSFEGLGH-YTVPKEMDEVCNWLTARLGLE 253 (257)
Q Consensus 210 ~~~~l----~~~~~-~~~~~~~~~g~~H-~~~~~~~~~~~~~l~~~l~~~ 253 (257)
....+ +..|. .++.+.+..|-+| .+..+..+.+.+||+++|...
T Consensus 299 ~~~~a~~VY~~lG~~d~~~~~~~ggH~Hc~fp~~~~~~~~~F~~k~L~~~ 348 (375)
T 3pic_A 299 CMTAAHMAWQALGVSDHMGYSQIGAHAHCAFPSNQQSQLTAFVQKFLLGQ 348 (375)
T ss_dssp HHHHHHHHHHHTTCGGGEEEECCSCCSTTCCCGGGHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHcCCccceEEEeeCCCccccCCHHHHHHHHHHHHHHhCCC
Confidence 32222 22333 3567755343456 456777899999999999764
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.15 E-value=2.7e-10 Score=93.16 Aligned_cols=127 Identities=17% Similarity=0.052 Sum_probs=75.7
Q ss_pred CCceEEeCCC--CCCceEEEEEccCCCCccc-------hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCC
Q 025121 21 FGRTHVVRPK--GKHQATIVWLHGLGDNGSS-------WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGEL 91 (257)
Q Consensus 21 ~~~~~~~~~~--~~~~~~vi~~HG~~~~~~~-------~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~ 91 (257)
|...+.+... +.+..+|+|+||..++... +..+++.+ ++.|+++|+|++|.+...+... + ...
T Consensus 23 f~qRy~~~~~~~~~~g~Pi~l~~Ggeg~~~~~~~~~g~~~~lA~~~---~~~Vi~~DhRg~G~S~p~~~~~---~--~~~ 94 (446)
T 3n2z_B 23 FNQRYLVADKYWKKNGGSILFYTGNEGDIIWFCNNTGFMWDVAEEL---KAMLVFAEHRYYGESLPFGDNS---F--KDS 94 (446)
T ss_dssp EEEEEEEECTTCCTTTCEEEEEECCSSCHHHHHHHCHHHHHHHHHH---TEEEEEECCTTSTTCCTTGGGG---G--SCT
T ss_pred EEEEEEEehhhcCCCCCCEEEEeCCCCcchhhhhcccHHHHHHHHh---CCcEEEEecCCCCCCCCCCccc---c--ccc
Confidence 3334444433 1233457888987776543 22344443 6899999999998764322100 0 000
Q ss_pred CCCCCCchhhHHHHHHHHHHHhccCC---CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCC
Q 025121 92 SDDGPEDWEGLDASAAHIANLLSTEP---ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWL 166 (257)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 166 (257)
..-.....++..+++..+.+.++... ...+++++||||||.+|+.++.+ +|+.+.++|+.++.+
T Consensus 95 ~~l~~lt~~q~~~Dl~~~~~~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~-----------yP~~v~g~i~ssapv 161 (446)
T 3n2z_B 95 RHLNFLTSEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMK-----------YPHMVVGALAASAPI 161 (446)
T ss_dssp TTSTTCSHHHHHHHHHHHHHHHHHHSTTGGGCCEEEEEETHHHHHHHHHHHH-----------CTTTCSEEEEETCCT
T ss_pred hhhccCCHHHHHHHHHHHHHHHHHhcccCCCCCEEEEEeCHHHHHHHHHHHh-----------hhccccEEEEeccch
Confidence 00011123444444444544444321 23489999999999999999995 599999999887654
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=99.14 E-value=6.9e-11 Score=94.75 Aligned_cols=42 Identities=21% Similarity=0.251 Sum_probs=31.6
Q ss_pred CCceEEEEEccCCCCcc-------chHHH----hhcCCCCceEEEccCCCCCC
Q 025121 32 KHQATIVWLHGLGDNGS-------SWSQL----LESLPLPNIKWICPTAPTRP 73 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~-------~~~~~----~~~l~~~g~~v~~~d~~~~g 73 (257)
+.+++|||+||++++.. .|..+ ++.|.+.||+|+++|+|++|
T Consensus 4 ~~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G 56 (387)
T 2dsn_A 4 ANDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLS 56 (387)
T ss_dssp CCCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSB
T ss_pred CCCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCC
Confidence 34567999999988753 36543 37777789999999998654
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=99.12 E-value=9e-11 Score=95.43 Aligned_cols=134 Identities=14% Similarity=0.103 Sum_probs=69.9
Q ss_pred CCceEEEEEccCCCC--------ccchH----HHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCC--C
Q 025121 32 KHQATIVWLHGLGDN--------GSSWS----QLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGP--E 97 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~--------~~~~~----~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~--~ 97 (257)
..+++|||+||++++ ...|. .+++.|...||.|+++|+|++|.+......... +.......... .
T Consensus 50 ~~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~-~i~~g~g~sg~~~~ 128 (431)
T 2hih_A 50 KNKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYY-YLKGGRVDYGAAHS 128 (431)
T ss_dssp SCSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHH-HHHCEEEECCHHHH
T ss_pred CCCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhh-hhhhcccccccccc
Confidence 456789999999875 23464 477888778999999999976543210000000 00000000000 0
Q ss_pred chhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCC---------C------CCCCcccccceEEEe
Q 025121 98 DWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRY---------G------NGIPYYVNLRAVVGL 162 (257)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~---------~------~~~~~~~~~~~~i~~ 162 (257)
....+.+.++++..+++......+++|+||||||.++..++........ . .....++++.+++++
T Consensus 129 ~~~~~~~~a~dl~~ll~~l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv~i 208 (431)
T 2hih_A 129 EKYGHERYGKTYEGVLKDWKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSITTI 208 (431)
T ss_dssp HHHTCCSEEEEECCSCTTCBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHHhCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEEEEE
Confidence 0000000011112233332222499999999999999998865210000 0 000136789999999
Q ss_pred ccCC
Q 025121 163 SGWL 166 (257)
Q Consensus 163 ~~~~ 166 (257)
++..
T Consensus 209 ~tP~ 212 (431)
T 2hih_A 209 ATPH 212 (431)
T ss_dssp SCCT
T ss_pred CCCC
Confidence 8753
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=99.12 E-value=1.6e-10 Score=78.90 Aligned_cols=79 Identities=11% Similarity=0.068 Sum_probs=56.3
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.++||++| ++...|..+ |+ .+|.|+++|+|++|.+... ... +.+.++++.+++
T Consensus 22 ~~~vv~~H---~~~~~~~~~---l~-~~~~v~~~d~~G~G~s~~~-----------------~~~---~~~~~~~~~~~~ 74 (131)
T 2dst_A 22 GPPVLLVA---EEASRWPEA---LP-EGYAFYLLDLPGYGRTEGP-----------------RMA---PEELAHFVAGFA 74 (131)
T ss_dssp SSEEEEES---SSGGGCCSC---CC-TTSEEEEECCTTSTTCCCC-----------------CCC---HHHHHHHHHHHH
T ss_pred CCeEEEEc---CCHHHHHHH---Hh-CCcEEEEECCCCCCCCCCC-----------------CCC---HHHHHHHHHHHH
Confidence 56899999 555566655 66 4599999999987543211 011 455566666666
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHh
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
+..... +++++||||||.+++.++.+
T Consensus 75 ~~~~~~-~~~lvG~S~Gg~~a~~~a~~ 100 (131)
T 2dst_A 75 VMMNLG-APWVLLRGLGLALGPHLEAL 100 (131)
T ss_dssp HHTTCC-SCEEEECGGGGGGHHHHHHT
T ss_pred HHcCCC-ccEEEEEChHHHHHHHHHhc
Confidence 655433 89999999999999999985
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=98.82 E-value=3.9e-09 Score=88.03 Aligned_cols=124 Identities=16% Similarity=0.004 Sum_probs=70.9
Q ss_pred CCCceEEEEEccCC---CCccchHHHhhcCCCCc-eEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025121 31 GKHQATIVWLHGLG---DNGSSWSQLLESLPLPN-IKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 31 ~~~~~~vi~~HG~~---~~~~~~~~~~~~l~~~g-~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
+.+.|+||++||.+ ++...+......|+..+ +.|+.+|+|.-.++...... ...............+....+
T Consensus 96 ~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~----~~~~~~~~~~n~gl~D~~~al 171 (498)
T 2ogt_A 96 GKKRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGD----SFGEAYAQAGNLGILDQVAAL 171 (498)
T ss_dssp SCCEEEEEEECCSTTTSCCTTCGGGCCHHHHHHHTCEEEEECCCCHHHHCCCCTT----TTCGGGTTGGGHHHHHHHHHH
T ss_pred CCCCcEEEEEcCCccCCCCCCCCcCCHHHHHhCCCEEEEeCCCcCchhhccCchh----hccccccCCCCcccHHHHHHH
Confidence 45679999999987 44444333345555445 99999998842111100000 000000000011123334444
Q ss_pred HHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCC
Q 025121 107 AHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP 167 (257)
Q Consensus 107 ~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 167 (257)
+++.+.+.... +.++|.|+|+|.||.+++.++... .....++++|+.||...
T Consensus 172 ~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~---------~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 172 RWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLP---------EASGLFRRAMLQSGSGS 224 (498)
T ss_dssp HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCG---------GGTTSCSEEEEESCCTT
T ss_pred HHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcc---------cccchhheeeeccCCcc
Confidence 55555554432 346999999999999999888742 12456899999988643
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=98.70 E-value=1.7e-08 Score=85.25 Aligned_cols=114 Identities=18% Similarity=0.081 Sum_probs=69.9
Q ss_pred ceEEEEEccCC---CCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025121 34 QATIVWLHGLG---DNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 34 ~~~vi~~HG~~---~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
.|+|||+||.+ ++..........|+..|+.|+.+++|.-.++.. ..............+....++++.
T Consensus 115 ~Pviv~iHGGg~~~g~~~~~~~~~~~l~~~g~vvv~~nYRl~~~Gf~---------~~~~~~~~~n~gl~D~~~al~wv~ 185 (551)
T 2fj0_A 115 LPVLVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRLNVYGFL---------SLNSTSVPGNAGLRDMVTLLKWVQ 185 (551)
T ss_dssp EEEEEEECCSTTTSCCSCTTTCBCTTGGGGSCEEEEECCCCHHHHHC---------CCSSSSCCSCHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCccccCCCcccccCHHHHHhCCeEEEEeCCcCCccccc---------cCcccCCCCchhHHHHHHHHHHHH
Confidence 79999999954 233222234456667899999999874221111 101111111222344444555555
Q ss_pred HHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025121 111 NLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 111 ~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
+.+.... +.++|.|+|+|.||.++..++... ..+..+.++|+.+|.
T Consensus 186 ~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~---------~~~~lf~~~i~~sg~ 232 (551)
T 2fj0_A 186 RNAHFFGGRPDDVTLMGQSAGAAATHILSLSK---------AADGLFRRAILMSGT 232 (551)
T ss_dssp HHTGGGTEEEEEEEEEEETHHHHHHHHHTTCG---------GGTTSCSEEEEESCC
T ss_pred HHHHHhCCChhhEEEEEEChHHhhhhccccCc---------hhhhhhhheeeecCC
Confidence 5554443 346999999999999999988742 224578899998874
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=98.65 E-value=4.4e-08 Score=82.33 Aligned_cols=117 Identities=15% Similarity=0.054 Sum_probs=70.1
Q ss_pred CCceEEEEEccCC---CCccchHHHhhcCCC-CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025121 32 KHQATIVWLHGLG---DNGSSWSQLLESLPL-PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 32 ~~~~~vi~~HG~~---~~~~~~~~~~~~l~~-~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
.+.|+|||+||.+ ++..........|+. .|+.|+.+++|.-.++..... ............+....++
T Consensus 105 ~~~Pv~v~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~--------~~~~~~~n~gl~D~~~al~ 176 (529)
T 1p0i_A 105 KNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALP--------GNPEAPGNMGLFDQQLALQ 176 (529)
T ss_dssp SSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCT--------TCTTSCSCHHHHHHHHHHH
T ss_pred CCCeEEEEECCCccccCCCCccccChHHHhccCCeEEEEecccccccccccCC--------CCCCCcCcccHHHHHHHHH
Confidence 5679999999965 233221122344443 689999999874211110000 0001111222344555556
Q ss_pred HHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025121 108 HIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 108 ~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
++.+.+.... +.++|.|+|+|.||..+..++... .....++++|+.||.
T Consensus 177 wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~---------~~~~lf~~~i~~Sg~ 226 (529)
T 1p0i_A 177 WVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSP---------GSHSLFTRAILQSGS 226 (529)
T ss_dssp HHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCG---------GGGGGCSEEEEESCC
T ss_pred HHHHHHHHhCCChhheEEeeccccHHHHHHHHhCc---------cchHHHHHHHHhcCc
Confidence 6666665543 346999999999999999988742 124578999999885
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=98.57 E-value=7.8e-08 Score=81.07 Aligned_cols=117 Identities=15% Similarity=0.050 Sum_probs=68.3
Q ss_pred CCceEEEEEccCC---CCccchHHHhhcCCC-CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025121 32 KHQATIVWLHGLG---DNGSSWSQLLESLPL-PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 32 ~~~~~vi~~HG~~---~~~~~~~~~~~~l~~-~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
.+.|+||++||.+ ++..........|+. .|+.|+.+++|.-.++..... ............+....++
T Consensus 110 ~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~g~vvv~~nYRlg~~Gf~~~~--------~~~~~~~n~gl~D~~~al~ 181 (543)
T 2ha2_A 110 SPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALP--------GSREAPGNVGLLDQRLALQ 181 (543)
T ss_dssp SCEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCT--------TCSSCCSCHHHHHHHHHHH
T ss_pred CCCeEEEEECCCccccCCCCCCcCChHHHHhcCCEEEEEecccccccccccCC--------CCCCCCCcccHHHHHHHHH
Confidence 3469999999966 232221222334443 699999999874211110000 0001111222344455555
Q ss_pred HHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025121 108 HIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 108 ~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
++.+.+.... +.++|.|+|+|.||.++..++... ..+..++++|+.||.
T Consensus 182 wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~---------~~~~lf~~~i~~sg~ 231 (543)
T 2ha2_A 182 WVQENIAAFGGDPMSVTLFGESAGAASVGMHILSL---------PSRSLFHRAVLQSGT 231 (543)
T ss_dssp HHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSH---------HHHTTCSEEEEESCC
T ss_pred HHHHHHHHhCCChhheEEEeechHHHHHHHHHhCc---------ccHHhHhhheeccCC
Confidence 6666555543 346999999999999998887732 114568899988873
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=1.6e-07 Score=79.18 Aligned_cols=115 Identities=17% Similarity=0.133 Sum_probs=69.3
Q ss_pred CCceEEEEEccCC---CCccchHHHhhcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025121 32 KHQATIVWLHGLG---DNGSSWSQLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 32 ~~~~~vi~~HG~~---~~~~~~~~~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
++.|+||++||.+ ++...|... .|+ ..|+.|+.+++|.-..+.. ..............+....++
T Consensus 113 ~~~Pv~v~iHGG~~~~g~~~~~~~~--~la~~~g~vvv~~nYRlg~~gf~---------~~~~~~~~~n~gl~D~~~al~ 181 (542)
T 2h7c_A 113 NRLPVMVWIHGGGLMVGAASTYDGL--ALAAHENVVVVTIQYRLGIWGFF---------STGDEHSRGNWGHLDQVAALR 181 (542)
T ss_dssp CCEEEEEEECCSTTTSCCSTTSCCH--HHHHHHTCEEEEECCCCHHHHHC---------CCSSTTCCCCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcccCCCccccCHH--HHHhcCCEEEEecCCCCccccCC---------CCCcccCccchhHHHHHHHHH
Confidence 4679999999954 232223221 233 3689999999873211111 001111111122334455555
Q ss_pred HHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCC
Q 025121 108 HIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWL 166 (257)
Q Consensus 108 ~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 166 (257)
++.+.+.... +.++|.|+|+|.||.++..++... ..+..++++|+.||..
T Consensus 182 wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~---------~~~~lf~~ai~~Sg~~ 232 (542)
T 2h7c_A 182 WVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSP---------LAKNLFHRAISESGVA 232 (542)
T ss_dssp HHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCG---------GGTTSCSEEEEESCCT
T ss_pred HHHHHHHHcCCCccceEEEEechHHHHHHHHHhhh---------hhhHHHHHHhhhcCCc
Confidence 6666555543 346999999999999999998742 2356789999998854
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.55 E-value=1.1e-06 Score=73.83 Aligned_cols=202 Identities=10% Similarity=0.060 Sum_probs=103.0
Q ss_pred CCceEEEEEccCCCCc---cchH--HHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025121 32 KHQATIVWLHGLGDNG---SSWS--QLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~---~~~~--~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
.+.|+|||+||.+... ..|. .++.. ...|+.|+.+++|.-.++...... .. .....+....+....+
T Consensus 100 ~~~Pviv~iHGGg~~~g~~~~~~~~~~~~~-~~~g~vvv~~nYRlg~~Gf~~~~~----~~---~~~~~n~gl~D~~~al 171 (522)
T 1ukc_A 100 SKLPVWLFIQGGGYAENSNANYNGTQVIQA-SDDVIVFVTFNYRVGALGFLASEK----VR---QNGDLNAGLLDQRKAL 171 (522)
T ss_dssp CCEEEEEEECCSTTTSCCSCSCCCHHHHHH-TTSCCEEEEECCCCHHHHHCCCHH----HH---HSSCTTHHHHHHHHHH
T ss_pred CCCCEEEEECCCccccCCccccCcHHHHHh-cCCcEEEEEecccccccccccchh----cc---ccCCCChhHHHHHHHH
Confidence 4579999999976322 2222 22222 246999999998742211111000 00 0001122234445555
Q ss_pred HHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhh----------hhc
Q 025121 107 AHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL----------RNK 175 (257)
Q Consensus 107 ~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----------~~~ 175 (257)
+++.+.+.... +.++|.|+|+|.||..+..++..... .....+.++|+.+|........ ...
T Consensus 172 ~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~-------~~~~lf~~~i~~sg~~~~~~~~~~~~~~~~~~~~~ 244 (522)
T 1ukc_A 172 RWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGG-------KDEGLFIGAIVESSFWPTQRTVSEMEFQFERFVND 244 (522)
T ss_dssp HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGT-------CCCSSCSEEEEESCCCCCCCCSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCc-------cccccchhhhhcCCCcCCcCCHHHHHHHHHHHHHH
Confidence 55656555433 34699999999999887776653200 1145688899888864321100 000
Q ss_pred ccc-------------chHHHhhh---------cCCC--EEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCC
Q 025121 176 IEG-------------SHEAARRA---------ASLP--ILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLG 231 (257)
Q Consensus 176 ~~~-------------~~~~~~~~---------~~~P--~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~ 231 (257)
... ........ ...| .+.+....|..+.++...++.+..+..++ ++-+-...+.+
T Consensus 245 ~gc~~~~~~~~~Lr~~~~~~l~~a~~~~~~~~~~~~~~~~~~f~Pv~D~~~l~~~p~~~~~~g~~~~v-p~l~G~~~~Eg 323 (522)
T 1ukc_A 245 TGCSSARDSLECLREQDIATIQKGNTGSPFPGGSSSPLPDWYFLPVTDGSLVPDELYNAFDAGNFIKV-PVLVGDDTDEG 323 (522)
T ss_dssp TTCTTCSSHHHHHHHSCHHHHHHHSSCCCCTTCCSSSCCSCCSCCCCCSSSSCSCHHHHHHHTCSCCC-CEEEEEETBGG
T ss_pred cCCCCHHHHHHHHHcCCHHHHHHHHHhccccccccCcccccccccccCCcccCCCHHHHHhcCCCCCC-CEEEEeecchh
Confidence 000 00000000 1123 45566777776666777777666554433 34444456667
Q ss_pred CccCH--HHHHHHHHHHHHh
Q 025121 232 HYTVP--KEMDEVCNWLTAR 249 (257)
Q Consensus 232 H~~~~--~~~~~~~~~l~~~ 249 (257)
|.+.. ...+.+.+|+...
T Consensus 324 ~~f~~~~~~~~~~~~~l~~~ 343 (522)
T 1ukc_A 324 SNFAYNASSSADVSRFFKNN 343 (522)
T ss_dssp GGTSCCCSSHHHHHHHHHHH
T ss_pred HHhhccCCCHHHHHHHHHHH
Confidence 76541 1234455555443
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=98.55 E-value=1.1e-07 Score=79.95 Aligned_cols=118 Identities=15% Similarity=0.050 Sum_probs=70.1
Q ss_pred CCceEEEEEccCC---CCccchHHHhhcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025121 32 KHQATIVWLHGLG---DNGSSWSQLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 32 ~~~~~vi~~HG~~---~~~~~~~~~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
.+.|+|||+||.+ ++..........|+ ..|+.|+.+++|.-.++..... ............+....++
T Consensus 107 ~~~Pv~v~iHGG~~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~--------~~~~~~~n~gl~D~~~al~ 178 (537)
T 1ea5_A 107 KSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALH--------GSQEAPGNVGLLDQRMALQ 178 (537)
T ss_dssp SSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCT--------TCSSSCSCHHHHHHHHHHH
T ss_pred CCCeEEEEECCCcccCCCCCCCccChHHHHhcCCEEEEEeccCccccccccCC--------CCCCCcCccccHHHHHHHH
Confidence 5679999999955 23222112233444 5799999999874211110000 0001111222444455555
Q ss_pred HHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCC
Q 025121 108 HIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWL 166 (257)
Q Consensus 108 ~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 166 (257)
++.+.+.... +.++|.|+|+|.||..+..++... .....++++|+.||..
T Consensus 179 wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~---------~~~~lf~~~i~~Sg~~ 229 (537)
T 1ea5_A 179 WVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSP---------GSRDLFRRAILQSGSP 229 (537)
T ss_dssp HHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCH---------HHHTTCSEEEEESCCT
T ss_pred HHHHHHHHhCCCccceEEEecccHHHHHHHHHhCc---------cchhhhhhheeccCCc
Confidence 6666655543 346999999999999999888742 1245789999998853
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=1.9e-07 Score=79.33 Aligned_cols=123 Identities=10% Similarity=-0.052 Sum_probs=67.4
Q ss_pred CCCceEEEEEccCC---CCccchHHHhhcCCC-CceEEEccCCCCCCcccCCCCcccccccC-CCCCCCCCCchhhHHHH
Q 025121 31 GKHQATIVWLHGLG---DNGSSWSQLLESLPL-PNIKWICPTAPTRPVAILGGFPCTAWFDV-GELSDDGPEDWEGLDAS 105 (257)
Q Consensus 31 ~~~~~~vi~~HG~~---~~~~~~~~~~~~l~~-~g~~v~~~d~~~~g~~~~~g~~~~~w~~~-~~~~~~~~~~~~~~~~~ 105 (257)
+++.|+|||+||.+ ++..........|+. .++.|+.+++|.-.++.....+ . +.. ............+....
T Consensus 138 ~~~~PV~v~iHGGg~~~g~~~~~~~~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~--~-~~~~~~~~~~~n~gl~D~~~a 214 (585)
T 1dx4_A 138 TNGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAP--E-MPSEFAEEAPGNVGLWDQALA 214 (585)
T ss_dssp CSSEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGG--G-SCGGGTTSSCSCHHHHHHHHH
T ss_pred CCCCCEEEEECCCcccCCCCCCCCCCchhhhccCCEEEEEecccccchhhccccc--c-cccccCCCCCCcccHHHHHHH
Confidence 34679999999965 232222222233432 5899999998842211111000 0 000 00001111123344444
Q ss_pred HHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025121 106 AAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 106 ~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
++++.+.+.... +.++|.|+|+|.||..+..++... .....+.++|+.||.
T Consensus 215 l~wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~---------~~~~lf~~ai~~Sg~ 266 (585)
T 1dx4_A 215 IRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSP---------VTRGLVKRGMMQSGT 266 (585)
T ss_dssp HHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCT---------TTTTSCCEEEEESCC
T ss_pred HHHHHHHHHHhCCCcceeEEeecchHHHHHHHHHhCC---------cccchhHhhhhhccc
Confidence 445555444432 346999999999999988887742 224568888988874
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=98.29 E-value=6.2e-07 Score=75.99 Aligned_cols=116 Identities=13% Similarity=0.054 Sum_probs=67.5
Q ss_pred CCceEEEEEccCCCCccch---------HHHhhcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhh
Q 025121 32 KHQATIVWLHGLGDNGSSW---------SQLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEG 101 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~---------~~~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 101 (257)
.+.|+|||+||.+.....- ......|+ ..++.|+.+++|.-.++.. ..............+
T Consensus 96 ~~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl---------~~~~~~~pgn~gl~D 166 (579)
T 2bce_A 96 HDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFL---------STGDSNLPGNYGLWD 166 (579)
T ss_dssp CSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHC---------CCSSTTCCCCHHHHH
T ss_pred CCCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCC---------cCCCCCCCCccchHH
Confidence 4679999999976322111 11122333 2479999999874222111 101111111112445
Q ss_pred HHHHHHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025121 102 LDASAAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
....++++.+.+.... +.++|.|+|+|.||..+..++... .....+.++|+.||.
T Consensus 167 ~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~---------~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 167 QHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSP---------YNKGLIKRAISQSGV 222 (579)
T ss_dssp HHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCG---------GGTTTCSEEEEESCC
T ss_pred HHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCc---------chhhHHHHHHHhcCC
Confidence 5556666666665543 346999999999999999888742 124568888888763
|
| >2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.28 E-value=2.5e-06 Score=79.37 Aligned_cols=173 Identities=15% Similarity=0.069 Sum_probs=97.1
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
..+.++++|+.++....|..++..+. .+.++.++.+.. ........ +.
T Consensus 1057 ~~~~L~~l~~~~g~~~~y~~la~~L~--~~~v~~l~~~~~--------------------------~~~~~~~~----~~ 1104 (1304)
T 2vsq_A 1057 QEQIIFAFPPVLGYGLMYQNLSSRLP--SYKLCAFDFIEE--------------------------EDRLDRYA----DL 1104 (1304)
T ss_dssp SCCEEECCCCTTCBGGGGHHHHTTCC--SCEEEECBCCCS--------------------------TTHHHHHH----HH
T ss_pred cCCcceeecccccchHHHHHHHhccc--ccceEeecccCH--------------------------HHHHHHHH----HH
Confidence 34679999999999999999998886 688887764310 11112222 22
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-------------hhhhccc--
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR-------------NLRNKIE-- 177 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------------~~~~~~~-- 177 (257)
+.......++.++|||+||.++..++.+.... ...+..+++++++.+... .+.....
T Consensus 1105 i~~~~~~gp~~l~G~S~Gg~lA~e~A~~L~~~--------g~~v~~l~lld~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 1176 (1304)
T 2vsq_A 1105 IQKLQPEGPLTLFGYSAGCSLAFEAAKKLEEQ--------GRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDN 1176 (1304)
T ss_dssp HHHHCCSSCEEEEEETTHHHHHHHHHHHHHHS--------SCCEEEEEEESCCEECSCC-----CHHHHHHHHHTTCC--
T ss_pred HHHhCCCCCeEEEEecCCchHHHHHHHHHHhC--------CCceeEEEEecCcccccccccccccchhhHHHHHHhhhhh
Confidence 22222234899999999999999999864211 223555666654422110 0000000
Q ss_pred ---------c--------chHH-----HhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC
Q 025121 178 ---------G--------SHEA-----ARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV 235 (257)
Q Consensus 178 ---------~--------~~~~-----~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 235 (257)
. .... ......+|++++.|+.|.. +.+....+.+... ..++++.++| +|..+
T Consensus 1177 ~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~-~~~~~~~W~~~~~----~~~~~~~v~G-~H~~m 1250 (1304)
T 2vsq_A 1177 EALNSEAVKHGLKQKTHAFYSYYVNLISTGQVKADIDLLTSGADFD-IPEWLASWEEATT----GVYRMKRGFG-THAEM 1250 (1304)
T ss_dssp -----CTTTGGGHHHHHHHHHHHHC-----CBSSEEEEEECSSCCC-CCSSEECSSTTBS----SCCCEEECSS-CTTGG
T ss_pred hhhcchhcchHHHHHHHHHHHHHHHHhccCCcCCCEEEEEecCccc-cccchhhHHHHhC----CCeEEEEeCC-CHHHH
Confidence 0 0000 1134678999999998873 2222222222221 1567889996 99655
Q ss_pred --HHHHHHHHHHHHHhcC
Q 025121 236 --PKEMDEVCNWLTARLG 251 (257)
Q Consensus 236 --~~~~~~~~~~l~~~l~ 251 (257)
.+....+.+.|.+.+.
T Consensus 1251 l~~~~~~~~a~~l~~~L~ 1268 (1304)
T 2vsq_A 1251 LQGETLDRNAEILLEFLN 1268 (1304)
T ss_dssp GSHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHh
Confidence 3444455555555443
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=7.2e-07 Score=75.66 Aligned_cols=113 Identities=13% Similarity=0.117 Sum_probs=66.3
Q ss_pred CCceEEEEEccCCCC---ccchHHHhhcCCC-CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025121 32 KHQATIVWLHGLGDN---GSSWSQLLESLPL-PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~---~~~~~~~~~~l~~-~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
.+.|+|||+||.+.. ...+.. ..|+. .++.|+.+++|.-.++... ........+....+....++
T Consensus 129 ~~~Pv~v~iHGGg~~~g~~~~~~~--~~la~~~~~vvv~~~YRl~~~Gfl~---------~~~~~~~~n~gl~D~~~al~ 197 (574)
T 3bix_A 129 GPKPVMVYIHGGSYMEGTGNLYDG--SVLASYGNVIVITVNYRLGVLGFLS---------TGDQAAKGNYGLLDLIQALR 197 (574)
T ss_dssp CCEEEEEECCCSSSSSCCGGGSCC--HHHHHHHTCEEEEECCCCHHHHHCC---------CSSSSCCCCHHHHHHHHHHH
T ss_pred CCCcEEEEECCCcccCCCCCccCc--hhhhccCCEEEEEeCCcCcccccCc---------CCCCCCCCcccHHHHHHHHH
Confidence 357999999996532 222221 22332 3699999998743222111 01111112223344455555
Q ss_pred HHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcc-cccceEEEecc
Q 025121 108 HIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYY-VNLRAVVGLSG 164 (257)
Q Consensus 108 ~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~ 164 (257)
++.+.+.... +.++|.|+|+|.||.++..++... .-. ..+.++|+.||
T Consensus 198 wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~---------~~~~glf~~aI~~Sg 247 (574)
T 3bix_A 198 WTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSH---------YSEKGLFQRAIAQSG 247 (574)
T ss_dssp HHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCT---------TSCTTSCCEEEEESC
T ss_pred HHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCC---------CcchhHHHHHHHhcC
Confidence 5656555543 346999999999999999888742 112 45778888876
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=98.23 E-value=1.1e-06 Score=74.02 Aligned_cols=124 Identities=16% Similarity=0.111 Sum_probs=68.2
Q ss_pred CCceEEEEEccCCCCccc---hH--HHh-hcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025121 32 KHQATIVWLHGLGDNGSS---WS--QLL-ESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~---~~--~~~-~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
.+.|+|||+||.+..... +. .++ +.++ ..++.|+.+++|.-..+...... . . ..........+...
T Consensus 120 ~~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~~gf~~~~~----~--~-~~~~~n~gl~D~~~ 192 (544)
T 1thg_A 120 AKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDA----I--T-AEGNTNAGLHDQRK 192 (544)
T ss_dssp CCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHH----H--H-HHTCTTHHHHHHHH
T ss_pred CCCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCcccCCCccc----c--c-ccCCCchhHHHHHH
Confidence 467999999996643322 21 222 2222 35899999998853221111000 0 0 00011222344455
Q ss_pred HHHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025121 105 SAAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 105 ~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
.++++.+.+.... +.++|.|+|+|.||.+++.++....... ...-...++++|+.||.
T Consensus 193 Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~---~~~~~~lf~~~i~~Sg~ 251 (544)
T 1thg_A 193 GLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDN---TYNGKKLFHSAILQSGG 251 (544)
T ss_dssp HHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCC---EETTEESCSEEEEESCC
T ss_pred HHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccc---cccccccccceEEeccc
Confidence 5555655555443 3469999999999999988776410000 00014568999998873
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=4e-06 Score=70.51 Aligned_cols=124 Identities=17% Similarity=0.113 Sum_probs=68.2
Q ss_pred CCceEEEEEccCCCCc---cch--HHHhh-cC-CCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025121 32 KHQATIVWLHGLGDNG---SSW--SQLLE-SL-PLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~---~~~--~~~~~-~l-~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
++.|+||++||.+... ..| ..++. .+ ...++.|+.+++|.-..+...+.. .. .....+....+...
T Consensus 112 ~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~----~~---~~~~~n~gl~D~~~ 184 (534)
T 1llf_A 112 ANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDD----IK---AEGSGNAGLKDQRL 184 (534)
T ss_dssp CCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHH----HH---HHTCTTHHHHHHHH
T ss_pred CCceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCccc----cc---ccCCCchhHHHHHH
Confidence 4579999999966332 222 12222 22 246899999998753221111000 00 00111222444555
Q ss_pred HHHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025121 105 SAAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 105 ~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
.++++.+.+.... +.++|.|+|+|.||..+..++....... ...-...++++|+.||.
T Consensus 185 Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~---~~~~~~lf~~ai~~Sg~ 243 (534)
T 1llf_A 185 GMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDN---TYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp HHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCC---EETTEESCSEEEEESCC
T ss_pred HHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccc---cccccchhHhHhhhccC
Confidence 5566666555543 3469999999999998877766320000 00014568999999874
|
| >1cpy_A Serine carboxypeptidase; hydrolase (carboxypeptidase); HET: NAG; 2.60A {Saccharomyces cerevisiae} SCOP: c.69.1.5 PDB: 1wpx_A* 1ysc_A* | Back alignment and structure |
|---|
Probab=98.13 E-value=0.00061 Score=55.27 Aligned_cols=65 Identities=17% Similarity=0.153 Sum_probs=49.5
Q ss_pred cCCCEEEEccCCCCcccchhhHHHHHHhhhcCc--------------------------eeeEEEEecCCCCccCHHHHH
Q 025121 187 ASLPILLTHGLCDDVVPYKYGEKSANCLSISGF--------------------------RHLTFKSFEGLGHYTVPKEMD 240 (257)
Q Consensus 187 ~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~--------------------------~~~~~~~~~g~~H~~~~~~~~ 240 (257)
...+|||.+|+.|-+|+.-..+.+.+.|+-.+. .+.++..+.++||.+..+.++
T Consensus 326 ~girVlIysGd~D~i~~~~Gt~~wi~~L~w~~~~~F~~a~~~~w~~~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~ 405 (421)
T 1cpy_A 326 QDLPILVYAGDKDFICNWLGNKAWTDVLPWKYDEEFASQKVRNWTASITDEVAGEVKSYKHFTYLRVFNGGHMVPFDVPE 405 (421)
T ss_dssp TTCCEEEEEETTCSTTCHHHHHHHHHHCCSTTHHHHHHSCCEEEECTTTCSEEEEECEETTEEEEEETTCCSSHHHHCHH
T ss_pred cCCeEEEEECCcccccChHHHHHHHHhccCccchhhhhccccceEEcCCCceeeEEEEeccEEEEEECCCcccCcccCHH
Confidence 358999999999999999888888777742110 146788899999999877776
Q ss_pred HHHHHHHHhcC
Q 025121 241 EVCNWLTARLG 251 (257)
Q Consensus 241 ~~~~~l~~~l~ 251 (257)
...+.|.+++.
T Consensus 406 ~al~m~~~fl~ 416 (421)
T 1cpy_A 406 NALSMVNEWIH 416 (421)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhc
Confidence 66666666654
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=97.98 E-value=6.9e-05 Score=61.48 Aligned_cols=65 Identities=23% Similarity=0.314 Sum_probs=51.6
Q ss_pred CCCEEEEccCCCCcccchhhHHHHHHhhhc--------------------Cc----eeeEEEEecCCCCccCHHHHHHHH
Q 025121 188 SLPILLTHGLCDDVVPYKYGEKSANCLSIS--------------------GF----RHLTFKSFEGLGHYTVPKEMDEVC 243 (257)
Q Consensus 188 ~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~--------------------~~----~~~~~~~~~g~~H~~~~~~~~~~~ 243 (257)
.++|||.+|+.|-+|+.-..+.+.+.|.-. |. .+.++..+.++||.+..+.++...
T Consensus 361 girVlIYsGD~D~icn~~Gt~~wi~~L~~~~~~~~~pw~~~~~~~~~~vaG~~~~y~nLtf~tV~gAGHmVP~dqP~~al 440 (452)
T 1ivy_A 361 KYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAAF 440 (452)
T ss_dssp CCEEEEEEETTCSSSCHHHHHHHHHHTCCCEEEEEEEEEEECTTSCEEEEEEEEEESSEEEEEETTCCSSHHHHCHHHHH
T ss_pred CceEEEEeCCCCccCCcHHHHHHHHhcCCcccccceeeeeccCCCCcccceEEEEEcceEEEEECCCcccCcccChHHHH
Confidence 689999999999999998888888888511 10 146788899999999887777777
Q ss_pred HHHHHhcCc
Q 025121 244 NWLTARLGL 252 (257)
Q Consensus 244 ~~l~~~l~~ 252 (257)
+.|++++..
T Consensus 441 ~m~~~fl~g 449 (452)
T 1ivy_A 441 TMFSRFLNK 449 (452)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHhcC
Confidence 777777654
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00028 Score=52.98 Aligned_cols=125 Identities=14% Similarity=0.050 Sum_probs=72.9
Q ss_pred CCceEEEEEccCCCCccch-HHHhh-----------cCC------CCceEEEccCCC-CCCcccCCCCcccccccCCCCC
Q 025121 32 KHQATIVWLHGLGDNGSSW-SQLLE-----------SLP------LPNIKWICPTAP-TRPVAILGGFPCTAWFDVGELS 92 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~-~~~~~-----------~l~------~~g~~v~~~d~~-~~g~~~~~g~~~~~w~~~~~~~ 92 (257)
...|+|||++|..+++..+ ..+.+ .+. ..-..++.+|.| |-|++..... .. +
T Consensus 46 ~~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~~anvlfiDqPvGtGfSy~~~~--~~-~------ 116 (255)
T 1whs_A 46 QPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNKVANVLFLDSPAGVGFSYTNTS--SD-I------ 116 (255)
T ss_dssp CSCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCGGGTSEEEEECCSTTSTTCEESSG--GG-G------
T ss_pred CCCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCcccccccCCEEEEecCCCCccCCCcCc--cc-c------
Confidence 4579999999998887765 33221 010 134678888865 3333321110 00 0
Q ss_pred CCCCCchhhHHHHHHHHHHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch
Q 025121 93 DDGPEDWEGLDASAAHIANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR 170 (257)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 170 (257)
..........+....+..+++.. ....+++|+|.|+||..+..+|....... ...-.++++++.+|++....
T Consensus 117 -~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n-----~~~inLkGi~ign~~~d~~~ 190 (255)
T 1whs_A 117 -YTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSK-----NPVINLKGFMVGNGLIDDYH 190 (255)
T ss_dssp -GSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHT-----CSSCEEEEEEEEEECCBHHH
T ss_pred -ccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcC-----CcccccceEEecCCccCHHH
Confidence 01122334444455555555543 22348999999999999988887532110 11356899999999886543
Q ss_pred h
Q 025121 171 N 171 (257)
Q Consensus 171 ~ 171 (257)
.
T Consensus 191 ~ 191 (255)
T 1whs_A 191 D 191 (255)
T ss_dssp H
T ss_pred h
Confidence 3
|
| >1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00027 Score=54.00 Aligned_cols=23 Identities=30% Similarity=0.387 Sum_probs=20.5
Q ss_pred CceEEEEEechhHHHHHHHHHhc
Q 025121 119 DVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 119 ~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
..+++++||||||.+|..++.+.
T Consensus 137 ~~~i~l~GHSLGGalA~l~a~~l 159 (269)
T 1tib_A 137 DYRVVFTGHSLGGALATVAGADL 159 (269)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHH
T ss_pred CceEEEecCChHHHHHHHHHHHH
Confidence 34999999999999999999864
|
| >1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00033 Score=53.76 Aligned_cols=23 Identities=39% Similarity=0.426 Sum_probs=20.4
Q ss_pred CceEEEEEechhHHHHHHHHHhc
Q 025121 119 DVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 119 ~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
..++.++||||||.+|..++...
T Consensus 136 ~~~i~vtGHSLGGalA~l~a~~l 158 (279)
T 1tia_A 136 NYELVVVGHSLGAAVATLAATDL 158 (279)
T ss_pred CCeEEEEecCHHHHHHHHHHHHH
Confidence 34999999999999999999864
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=1.8e-05 Score=77.38 Aligned_cols=82 Identities=15% Similarity=0.172 Sum_probs=0.0
Q ss_pred CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 33 HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
..+.++++|+.++....|..+.+.|. ..++.+..|+. ....++.+.++.+.+.
T Consensus 2241 ~~~~Lfc~~~agG~~~~y~~l~~~l~---~~v~~lq~pg~------------------------~~~~~i~~la~~~~~~ 2293 (2512)
T 2vz8_A 2241 AERPLFLVHPIEGSITVFHGLAAKLS---IPTYGLQCTGA------------------------APLDSIQSLASYYIEC 2293 (2512)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCeEEeCCccccHHHHHHHHHhhC---CcEEEEecCCC------------------------CCCCCHHHHHHHHHHH
Confidence 45689999999999988988888874 66666665520 0122334445555455
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhc
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
+.......++.++|||+||.+|..++.+.
T Consensus 2294 i~~~~p~gpy~L~G~S~Gg~lA~evA~~L 2322 (2512)
T 2vz8_A 2294 IRQVQPEGPYRIAGYSYGACVAFEMCSQL 2322 (2512)
T ss_dssp -----------------------------
T ss_pred HHHhCCCCCEEEEEECHhHHHHHHHHHHH
Confidence 54443334899999999999999998764
|
| >3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A {Mycobacterium phage D29} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.003 Score=47.31 Aligned_cols=113 Identities=17% Similarity=0.167 Sum_probs=62.0
Q ss_pred CceEEEEEccCCCCc--c--chHHHhhcCCCCceEEEcc-CCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025121 33 HQATIVWLHGLGDNG--S--SWSQLLESLPLPNIKWICP-TAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~--~--~~~~~~~~l~~~g~~v~~~-d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
.+|+||+.||.+... . ....+++.|.. .+..-.+ ++|-.. +.. .........+...
T Consensus 2 ~~p~ii~ARGT~e~~~~GpG~~~~la~~l~~-~~~~q~Vg~YpA~~------------~~y------~~S~~~G~~~~~~ 62 (254)
T 3hc7_A 2 SKPWLFTVHGTGQPDPLGPGLPADTARDVLD-IYRWQPIGNYPAAA------------FPM------WPSVEKGVAELIL 62 (254)
T ss_dssp CCCEEEEECCTTCCCTTSSSHHHHHHTTSTT-TSEEEECCSCCCCS------------SSC------HHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCCCCCCCcHHHHHHHHHH-hcCCCccccccCcc------------cCc------cchHHHHHHHHHH
Confidence 368999999988742 1 24567777753 3332222 233110 000 0011233444444
Q ss_pred HHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025121 108 HIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 108 ~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
.+.+...+- .+.+++|.|+|+|+.++-.++...-...........+++.+++++.-.
T Consensus 63 ~i~~~~~~C-P~tkiVL~GYSQGA~V~~~~l~~~i~~~~g~~~~~~~~V~avvlfGdP 119 (254)
T 3hc7_A 63 QIELKLDAD-PYADFAMAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGNP 119 (254)
T ss_dssp HHHHHHHHC-TTCCEEEEEETHHHHHHHHHHHHHTSSTTCTTGGGGGGEEEEEEESCT
T ss_pred HHHHHHhhC-CCCeEEEEeeCchHHHHHHHHHhhccCCCCCchhhhhhEEEEEEEeCC
Confidence 454444333 345999999999999999988652100000011235789999988643
|
| >1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A {Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A* 3tgl_A | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00059 Score=52.10 Aligned_cols=22 Identities=41% Similarity=0.484 Sum_probs=19.7
Q ss_pred ceEEEEEechhHHHHHHHHHhc
Q 025121 120 VKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 120 ~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
.++.++||||||.+|..++.+.
T Consensus 136 ~~i~~~GHSLGgalA~l~a~~l 157 (269)
T 1tgl_A 136 YKVAVTGHSLGGATALLCALDL 157 (269)
T ss_pred ceEEEEeeCHHHHHHHHHHHHH
Confidence 4799999999999999998864
|
| >4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.017 Score=44.50 Aligned_cols=120 Identities=15% Similarity=0.049 Sum_probs=69.9
Q ss_pred CCceEEEEEccCCCCccchHHHhhcC----C-------------CCceEEEccCCCCCCcccCCCCcccccccCCCCCCC
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESL----P-------------LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDD 94 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l----~-------------~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~ 94 (257)
...|+|||+-|..+.+..+..+.+.- . ..-..++.+|.|- .-| |+.......
T Consensus 48 ~~~Pl~lWlnGGPGcSS~~g~~~E~GP~~~~~~~~~l~~N~~sW~~~an~lfiD~Pv-----GtG------fSy~~~~~~ 116 (300)
T 4az3_A 48 ENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPA-----GVG------FSYSDDKFY 116 (300)
T ss_dssp TTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSSCEEECTTCGGGSSEEEEECCST-----TST------TCEETTCCC
T ss_pred CCCCEEEEECCCCcHHHHHHHHhcCCCceecCCCccccccCccHHhhhcchhhcCCC-----ccc------ccccCCCcc
Confidence 45799999999988877654333211 0 1234667777652 111 111111111
Q ss_pred CCCchhhHHHHHHHHHHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc
Q 025121 95 GPEDWEGLDASAAHIANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS 169 (257)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 169 (257)
.........+....+..+++.. ....+++|.|.|+||..+-.+|..... ...-.+++++...|++...
T Consensus 117 ~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~-------~~~inLkG~~iGNg~~d~~ 186 (300)
T 4az3_A 117 ATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQ-------DPSMNLQGLAVGNGLSSYE 186 (300)
T ss_dssp CCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTT-------CTTSCEEEEEEESCCSBHH
T ss_pred cccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHh-------CCCcccccceecCCccCHH
Confidence 2222333444455555555543 233589999999999999998875421 1134689999888887644
|
| >1whs_B Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1wht_B* 1bcs_B* 1bcr_B* 3sc2_B* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0012 Score=45.68 Aligned_cols=66 Identities=26% Similarity=0.224 Sum_probs=52.3
Q ss_pred cCCCEEEEccCCCCcccchhhHHHHHHhhhcCc-------------------eeeEEEEecCCCCccCHHHHHHHHHHHH
Q 025121 187 ASLPILLTHGLCDDVVPYKYGEKSANCLSISGF-------------------RHLTFKSFEGLGHYTVPKEMDEVCNWLT 247 (257)
Q Consensus 187 ~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~-------------------~~~~~~~~~g~~H~~~~~~~~~~~~~l~ 247 (257)
...++||.+|+.|-+|+.-..+.+.+.|.-.+. .+.++..+.++||.+..+.++...+.|.
T Consensus 63 ~girvlIy~Gd~D~i~~~~Gt~~~i~~L~w~~~~~~~~w~~~~~vaG~~~~~~~Ltf~~V~~AGHmVP~dqP~~a~~m~~ 142 (153)
T 1whs_B 63 AGLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALVLFQ 142 (153)
T ss_dssp TTCEEEEEEETTCSSSCHHHHHHHHHTTTCCEEEEEEEEEETTEEEEEEEEETTEEEEEETTCCSSHHHHSHHHHHHHHH
T ss_pred cCceEEEEecCcCcccccHhHHHHHHhCCCCCcccccceeECCCccEEEEEeCeEEEEEECCCcccCcccCHHHHHHHHH
Confidence 479999999999999999888888888862110 1578999999999998777777777776
Q ss_pred HhcCc
Q 025121 248 ARLGL 252 (257)
Q Consensus 248 ~~l~~ 252 (257)
+++..
T Consensus 143 ~fl~~ 147 (153)
T 1whs_B 143 YFLQG 147 (153)
T ss_dssp HHHHT
T ss_pred HHHCC
Confidence 66654
|
| >4az3_B Lysosomal protective protein 20 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_B* | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0036 Score=43.39 Aligned_cols=68 Identities=19% Similarity=0.210 Sum_probs=54.0
Q ss_pred hcCCCEEEEccCCCCcccchhhHHHHHHhhhcCc------------------------eeeEEEEecCCCCccCHHHHHH
Q 025121 186 AASLPILLTHGLCDDVVPYKYGEKSANCLSISGF------------------------RHLTFKSFEGLGHYTVPKEMDE 241 (257)
Q Consensus 186 ~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~------------------------~~~~~~~~~g~~H~~~~~~~~~ 241 (257)
...+++|+.+|+.|-+|+.-..+.+.+.+.-.+. .+.++..+.++||.+..+.++.
T Consensus 61 ~~girVliy~Gd~D~icn~~G~~~~i~~L~w~~~~~~~~w~~~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~ 140 (155)
T 4az3_B 61 SQKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLA 140 (155)
T ss_dssp TCCCEEEEEEETTCSSSCHHHHHHHHHHTCCSSCCCCEEEEEEETTTEEEEEEEEEEETTEEEEEETTCCSCHHHHCHHH
T ss_pred HcCceEEEEecccCcccCcHhHHHHHHhcccccccccccceeecccCCCEEEEEEEEeCCEEEEEECCCcCcChhhCHHH
Confidence 3468999999999999999888888888853211 1467888899999999888888
Q ss_pred HHHHHHHhcCcC
Q 025121 242 VCNWLTARLGLE 253 (257)
Q Consensus 242 ~~~~l~~~l~~~ 253 (257)
.++.|.+++..+
T Consensus 141 al~m~~~fl~g~ 152 (155)
T 4az3_B 141 AFTMFSRFLNKQ 152 (155)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 887777777643
|
| >3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted; HET: MIR; 0.85A {Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A* 1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A* 1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A* 3ef3_A* 3esd_A* 1cux_A ... | Back alignment and structure |
|---|
Probab=96.65 E-value=0.051 Score=38.99 Aligned_cols=167 Identities=12% Similarity=0.012 Sum_probs=90.4
Q ss_pred ceEEEEEccCCCCccc-------hHHHhhcCCCCceEEEcc--CCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025121 34 QATIVWLHGLGDNGSS-------WSQLLESLPLPNIKWICP--TAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~-------~~~~~~~l~~~g~~v~~~--d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
.-.|||.-|-++.... ...+...+......+..+ ++|-.... ++. ..........+
T Consensus 18 ~v~vi~ARGT~E~~~~G~~G~~~~~~L~~~~g~~~v~v~~V~~~YpA~~~~---------~~~------~~~S~~~G~~~ 82 (197)
T 3qpa_A 18 DVIFIYARGSTETGNLGTLGPSIASNLESAFGKDGVWIQGVGGAYRATLGD---------NAL------PRGTSSAAIRE 82 (197)
T ss_dssp SEEEEEECCTTCCTTTTTTHHHHHHHHHHHHCTTTEEEEECCTTCCCCGGG---------GGS------TTSSCHHHHHH
T ss_pred CEEEEEeeCCCCCCCCCcccHHHHHHHHHhcCCCceEEEeeCCCCcCCCCc---------ccC------ccccHHHHHHH
Confidence 3467778776654321 122333443356777777 66631100 000 01122445566
Q ss_pred HHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHh
Q 025121 105 SAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAAR 184 (257)
Q Consensus 105 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 184 (257)
+...+.++..+-. ..+++|+|+|+|+.++-.++...+ ....++|.+++++.-.....+ ...+ +
T Consensus 83 ~~~~i~~~~~~CP-~tkiVL~GYSQGA~V~~~~~~~l~-------~~~~~~V~avvlfGdP~~~~~--~G~~---p---- 145 (197)
T 3qpa_A 83 MLGLFQQANTKCP-DATLIAGGYXQGAALAAASIEDLD-------SAIRDKIAGTVLFGYTKNLQN--RGRI---P---- 145 (197)
T ss_dssp HHHHHHHHHHHCT-TCEEEEEEETHHHHHHHHHHHHSC-------HHHHTTEEEEEEESCTTTTTT--TTSC---T----
T ss_pred HHHHHHHHHHhCC-CCcEEEEecccccHHHHHHHhcCC-------HhHHhheEEEEEeeCCccccC--CCCC---C----
Confidence 6666666655443 349999999999999988876431 012468999998875332211 0000 0
Q ss_pred hhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHH-HHHHHHHHHHhcCc
Q 025121 185 RAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKE-MDEVCNWLTARLGL 252 (257)
Q Consensus 185 ~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~-~~~~~~~l~~~l~~ 252 (257)
....-.++.++-..|.++.... . .-..|..-... .+...+|+.+.++.
T Consensus 146 ~~~~~k~~~~C~~gD~vC~~g~--------------~------~~~aH~~Y~~~~~~~Aa~Fv~~~l~~ 194 (197)
T 3qpa_A 146 NYPADRTKVFCNTGDLVCTGSL--------------I------VAAPHLAYGPDARGPAPEFLIEKVRA 194 (197)
T ss_dssp TSCGGGEEEECCTTCGGGGTCC--------------C------CCGGGGCCHHHHHTHHHHHHHHHHHH
T ss_pred CCCHhHeeeecCCcCCcCCCCC--------------C------CchhhhChhhcHHHHHHHHHHHHHHh
Confidence 0012357777778887765210 0 01245544333 36788888877653
|
| >1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A {Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0027 Score=48.39 Aligned_cols=23 Identities=35% Similarity=0.366 Sum_probs=20.3
Q ss_pred CceEEEEEechhHHHHHHHHHhc
Q 025121 119 DVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 119 ~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
..++.++||||||.+|..++...
T Consensus 136 ~~~i~vtGHSLGGalA~l~a~~~ 158 (269)
T 1lgy_A 136 TYKVIVTGHSLGGAQALLAGMDL 158 (269)
T ss_dssp TCEEEEEEETHHHHHHHHHHHHH
T ss_pred CCeEEEeccChHHHHHHHHHHHH
Confidence 34999999999999999998864
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=96.60 E-value=0.012 Score=48.78 Aligned_cols=65 Identities=20% Similarity=0.117 Sum_probs=50.5
Q ss_pred CCCEEEEccCCCCcccchhhHHHHHHhhhc----------------------------Cc----eeeEEEEecCCCCccC
Q 025121 188 SLPILLTHGLCDDVVPYKYGEKSANCLSIS----------------------------GF----RHLTFKSFEGLGHYTV 235 (257)
Q Consensus 188 ~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~----------------------------~~----~~~~~~~~~g~~H~~~ 235 (257)
.++|||.+|+.|-+|+.-..+.+.+.|+-. |. .+.++..+.++||.+.
T Consensus 372 girVLIYsGD~D~icn~~Gt~~~i~~L~W~g~~~f~~~~~~~~W~~~~~~~~~~~~vaG~vk~~~nLTFvtV~gAGHmVP 451 (483)
T 1ac5_A 372 GIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHMVP 451 (483)
T ss_dssp TCEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSSHH
T ss_pred CceEEEEECCcCcccCcHHHHHHHHhcCcccccccccCCCceeeEECCccccCccccceEEEEecCeEEEEECCccccCc
Confidence 589999999999999998888888887510 10 1467889999999998
Q ss_pred HHHHHHHHHHHHHhcCc
Q 025121 236 PKEMDEVCNWLTARLGL 252 (257)
Q Consensus 236 ~~~~~~~~~~l~~~l~~ 252 (257)
.+.++...+.|..+|..
T Consensus 452 ~dqP~~al~m~~~fl~~ 468 (483)
T 1ac5_A 452 FDKSLVSRGIVDIYSND 468 (483)
T ss_dssp HHCHHHHHHHHHHHTTC
T ss_pred chhHHHHHHHHHHHHCC
Confidence 77777777666666543
|
| >1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0035 Score=47.56 Aligned_cols=23 Identities=30% Similarity=0.449 Sum_probs=20.3
Q ss_pred CceEEEEEechhHHHHHHHHHhc
Q 025121 119 DVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 119 ~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
..++.++|||+||.+|..++...
T Consensus 124 ~~~i~vtGHSLGGalA~l~a~~l 146 (261)
T 1uwc_A 124 DYALTVTGHSLGASMAALTAAQL 146 (261)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHH
T ss_pred CceEEEEecCHHHHHHHHHHHHH
Confidence 34999999999999999998864
|
| >3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum} | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0043 Score=46.90 Aligned_cols=34 Identities=21% Similarity=0.362 Sum_probs=24.4
Q ss_pred HHHHHHhccCCCCceEEEEEechhHHHHHHHHHhc
Q 025121 107 AHIANLLSTEPADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 107 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
..+.+++++.. ..++.++|||+||.+|..++...
T Consensus 112 ~~l~~~~~~~p-~~~i~vtGHSLGGalA~l~a~~l 145 (258)
T 3g7n_A 112 TEVKALIAKYP-DYTLEAVGHSLGGALTSIAHVAL 145 (258)
T ss_dssp HHHHHHHHHST-TCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCC-CCeEEEeccCHHHHHHHHHHHHH
Confidence 33444444433 34999999999999999988754
|
| >3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A* | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0045 Score=47.37 Aligned_cols=22 Identities=36% Similarity=0.433 Sum_probs=19.6
Q ss_pred ceEEEEEechhHHHHHHHHHhc
Q 025121 120 VKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 120 ~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
.++.++|||+||.+|..++...
T Consensus 138 ~~l~vtGHSLGGalA~l~a~~l 159 (279)
T 3uue_A 138 KRVTVIGHSLGAAMGLLCAMDI 159 (279)
T ss_dssp CCEEEEEETHHHHHHHHHHHHH
T ss_pred ceEEEcccCHHHHHHHHHHHHH
Confidence 4899999999999999998753
|
| >3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0053 Score=47.83 Aligned_cols=33 Identities=27% Similarity=0.276 Sum_probs=23.8
Q ss_pred HHHHHhccCCCCceEEEEEechhHHHHHHHHHhc
Q 025121 108 HIANLLSTEPADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 108 ~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
.+.+++++. ...++.++|||+||.+|..++...
T Consensus 125 ~l~~~~~~~-p~~~i~vtGHSLGGAlA~L~a~~l 157 (319)
T 3ngm_A 125 AVAKARKAN-PSFKVVSVGHSLGGAVATLAGANL 157 (319)
T ss_dssp HHHHHHHSS-TTCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHhhC-CCCceEEeecCHHHHHHHHHHHHH
Confidence 333444333 334999999999999999988754
|
| >1gxs_A P-(S)-hydroxymandelonitrIle lyase chain A; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=96.30 E-value=0.1 Score=39.49 Aligned_cols=123 Identities=13% Similarity=0.075 Sum_probs=66.3
Q ss_pred CCceEEEEEccCCCCccch-HHHhhc-----------CC------CCceEEEccCCC-CCCcccCCCCcccccccCCCCC
Q 025121 32 KHQATIVWLHGLGDNGSSW-SQLLES-----------LP------LPNIKWICPTAP-TRPVAILGGFPCTAWFDVGELS 92 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~-~~~~~~-----------l~------~~g~~v~~~d~~-~~g~~~~~g~~~~~w~~~~~~~ 92 (257)
...|+|||++|..+++..+ ..+.+. +. ..-..++.+|.| |-|++..... ..
T Consensus 52 ~~~Pl~lWlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~SW~~~anllfiDqPvGtGfSy~~~~--~~-------- 121 (270)
T 1gxs_A 52 AAAPLVLWLNGGPGCSSIGLGAMQELGAFRVHTNGESLLLNEYAWNKAANILFAESPAGVGFSYSNTS--SD-------- 121 (270)
T ss_dssp GGSCEEEEEECTTTBCTTTTHHHHTTSSEEECTTSSCEEECTTCGGGTSEEEEECCSTTSTTCEESSG--GG--------
T ss_pred CCCCEEEEecCCCcccchhhhhHHhccCceecCCCCcceeCccchhccccEEEEeccccccccCCCCC--cc--------
Confidence 4579999999998887764 433211 10 123578888865 3333221110 00
Q ss_pred CCCCCchhhHHHHHHHHHHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch
Q 025121 93 DDGPEDWEGLDASAAHIANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR 170 (257)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 170 (257)
-...+.....+....+..+++.. ....+++|.|.| |-++............. ...-.++++++.+|++....
T Consensus 122 -~~~~d~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GES-G~yvP~la~~i~~~n~~----~~~inLkGi~ign~~~d~~~ 195 (270)
T 1gxs_A 122 -LSMGDDKMAQDTYTFLVKWFERFPHYNYREFYIAGES-GHFIPQLSQVVYRNRNN----SPFINFQGLLVSSGLTNDHE 195 (270)
T ss_dssp -GCCCHHHHHHHHHHHHHHHHHHCGGGTTSEEEEEEEC-TTHHHHHHHHHHHTTTT----CTTCEEEEEEEESCCCBHHH
T ss_pred -ccCCcHHHHHHHHHHHHHHHHhChhhcCCCEEEEeCC-CcchHHHHHHHHhcccc----ccceeeeeEEEeCCccChhh
Confidence 01122333455555566666643 233489999999 65544433322110000 11356899999999886543
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=96.29 E-value=0.025 Score=46.73 Aligned_cols=90 Identities=14% Similarity=0.007 Sum_probs=53.4
Q ss_pred CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhccCC--CCceEEEEEechhHHHHHHH
Q 025121 60 PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEP--ADVKVGIGGFSMGAAVALYS 137 (257)
Q Consensus 60 ~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~G~S~Gg~~a~~~ 137 (257)
.|-.++..++|.-|.+..-+.... ....-.-...++..+++..+...++... .+.|++++|-|+||.+|..+
T Consensus 72 ~~a~~v~lEHRyYG~S~P~~~~st------~~~nL~yLt~eQALaD~a~fi~~~k~~~~~~~~pwI~~GGSY~G~LaAW~ 145 (472)
T 4ebb_A 72 RGALLVFAEHRYYGKSLPFGAQST------QRGHTELLTVEQALADFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYL 145 (472)
T ss_dssp HTCEEEEECCTTSTTCCTTGGGGG------STTSCTTCSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEETHHHHHHHHH
T ss_pred hCCeEEEEecccccCCcCCCCCCc------cccccccCCHHHHHHHHHHHHHHHHhhcCCCCCCEEEEccCccchhhHHH
Confidence 467888899997766543221100 0000011223333333333333333322 23499999999999999999
Q ss_pred HHhccccCCCCCCCcccccceEEEeccCC
Q 025121 138 ATCCALGRYGNGIPYYVNLRAVVGLSGWL 166 (257)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 166 (257)
-. +||..+.+.++-|+.+
T Consensus 146 R~-----------kYP~lv~ga~ASSApv 163 (472)
T 4ebb_A 146 RM-----------KYPHLVAGALAASAPV 163 (472)
T ss_dssp HH-----------HCTTTCSEEEEETCCT
T ss_pred Hh-----------hCCCeEEEEEecccce
Confidence 77 5699999999888753
|
| >3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine esterase; 1.90A {Glomerella cingulata} SCOP: c.69.1.0 PDB: 3dd5_A 3dea_A* | Back alignment and structure |
|---|
Probab=96.25 E-value=0.068 Score=38.46 Aligned_cols=165 Identities=12% Similarity=0.042 Sum_probs=90.5
Q ss_pred ceEEEEEccCCCCccc----hHHHh----hcCCCCceEEEcc--CCCCCCcccCCCCcccccccCCCCCCCCCCchhhHH
Q 025121 34 QATIVWLHGLGDNGSS----WSQLL----ESLPLPNIKWICP--TAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLD 103 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~----~~~~~----~~l~~~g~~v~~~--d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 103 (257)
.-.|||.-|-++.... -..+. ..+......|..+ ++|-.-.. ++. ..........
T Consensus 25 dv~vi~ARGT~E~~g~G~~~G~~~~~~L~~~~g~~~v~v~~V~~~YpA~~~~---------~~~------~~~S~~~G~~ 89 (201)
T 3dcn_A 25 KVIYIFARASTEPGNMGISAGPIVADALERIYGANDVWVQGVGGPYLADLAS---------NFL------PDGTSSAAIN 89 (201)
T ss_dssp SEEEEEECCTTCCTTTCSSHHHHHHHHHHHHHCGGGEEEEECCTTCCCCSGG---------GGS------TTSSCHHHHH
T ss_pred CEEEEEecCCCCCCCCCccccHHHHHHHHHhcCCCceEEEEeCCCccccCCc---------ccc------cCCCHHHHHH
Confidence 4578888887765431 12233 3333345777777 55521000 000 0112244566
Q ss_pred HHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHH
Q 025121 104 ASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAA 183 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 183 (257)
++...+.+...+-. +.+++|+|+|+|+.++-.++...+ ....++|.++++++-....... ..+ +
T Consensus 90 ~~~~~i~~~~~~CP-~tkiVL~GYSQGA~V~~~~~~~l~-------~~~~~~V~avvlfGdP~~~~~~--g~~---p--- 153 (201)
T 3dcn_A 90 EARRLFTLANTKCP-NAAIVSGGYSQGTAVMAGSISGLS-------TTIKNQIKGVVLFGYTKNLQNL--GRI---P--- 153 (201)
T ss_dssp HHHHHHHHHHHHCT-TSEEEEEEETHHHHHHHHHHTTSC-------HHHHHHEEEEEEETCTTTTTTT--TSC---T---
T ss_pred HHHHHHHHHHHhCC-CCcEEEEeecchhHHHHHHHhcCC-------hhhhhheEEEEEeeCcccccCC--CCC---C---
Confidence 66666666665543 349999999999999988876321 0123678899988743322110 000 0
Q ss_pred hhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHH-HHHHHHHHHHhc
Q 025121 184 RRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKE-MDEVCNWLTARL 250 (257)
Q Consensus 184 ~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~-~~~~~~~l~~~l 250 (257)
....-.++.++-..|.++.... . .-..|..-... .+...+|+.+.|
T Consensus 154 -~~~~~k~~~~C~~gD~vC~~g~--------------~------~~~aH~~Y~~~~~~~Aa~Fv~~kl 200 (201)
T 3dcn_A 154 -NFETSKTEVYCDIADAVCYGTL--------------F------ILPAHFLYQTDAAVAAPRFLQARI 200 (201)
T ss_dssp -TSCGGGEEEECCTTCGGGGTCC--------------C------CCCSSCCCHHHHHTHHHHHHHTTC
T ss_pred -CCChhHeeeecCCcCCccCCCC--------------C------CccchhChhhchHHHHHHHHHHhc
Confidence 0012357888888888875210 0 11356544333 367888887765
|
| >3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=96.23 E-value=0.0066 Score=46.97 Aligned_cols=34 Identities=24% Similarity=0.452 Sum_probs=24.9
Q ss_pred HHHHHHhccCCCCceEEEEEechhHHHHHHHHHhc
Q 025121 107 AHIANLLSTEPADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 107 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
..+.+++++.. ..++.+.|||+||.+|..++...
T Consensus 142 ~~l~~~~~~~p-~~~i~vtGHSLGGalA~l~a~~l 175 (301)
T 3o0d_A 142 PKLDSVIEQYP-DYQIAVTGHSLGGAAALLFGINL 175 (301)
T ss_dssp HHHHHHHHHST-TSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCC-CceEEEeccChHHHHHHHHHHHH
Confidence 34444444433 34999999999999999998864
|
| >3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=96.15 E-value=0.14 Score=39.44 Aligned_cols=114 Identities=17% Similarity=0.106 Sum_probs=62.6
Q ss_pred ceEEEEEccCCCCcc-------------c----hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCC
Q 025121 34 QATIVWLHGLGDNGS-------------S----WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGP 96 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~-------------~----~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~ 96 (257)
.-.||+.-|-++... . ...+...+......+..+++|-....... .....
T Consensus 40 ~v~vi~ARGT~E~~~~g~p~~p~~~~~g~~~~v~~~L~~~~~g~~v~v~~V~YPA~~~~~~~-------------~~~~~ 106 (302)
T 3aja_A 40 DVMMVSIPGTWESSPTDDPFNPTQFPLSLMSNISKPLAEQFGPDRLQVYTTPYTAQFHNPFA-------------ADKQM 106 (302)
T ss_dssp SEEEEEECCTTSCCTTSCSSSCCSCTTCTTHHHHHHHHHHSCTTTEEEEECCCCCCCCCTTT-------------TCCCC
T ss_pred CeEEEEecCCCCCCCCCCCcCcccccchhHHHHHHHHHHHcCCCcceEEecccccccccccc-------------ccccc
Confidence 447888888776542 1 13344555556677778887632100000 00001
Q ss_pred Cc----hhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEecc
Q 025121 97 ED----WEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG 164 (257)
Q Consensus 97 ~~----~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 164 (257)
.. .....+....+.+...+ ..+.+++|+|+|+|+.++-.++....... +...+++|.++++++-
T Consensus 107 ~Y~~S~~~G~~~~~~~i~~~~~~-CP~TkiVL~GYSQGA~V~~~~~~~i~~g~---~~~~~~~V~aVvLfGd 174 (302)
T 3aja_A 107 SYNDSRAEGMRTTVKAMTDMNDR-CPLTSYVIAGFSQGAVIAGDIASDIGNGR---GPVDEDLVLGVTLIAD 174 (302)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEETHHHHHHHHHHHHHHTTC---SSSCGGGEEEEEEESC
T ss_pred cccccHHHHHHHHHHHHHHHHhh-CCCCcEEEEeeCchHHHHHHHHHhccCCC---CCCChHHEEEEEEEeC
Confidence 11 22334444444444443 33459999999999999998876432110 1122578999988864
|
| >2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET: CIT; 1.05A {Cryptococcus SP} | Back alignment and structure |
|---|
Probab=96.11 E-value=0.065 Score=38.80 Aligned_cols=60 Identities=17% Similarity=0.168 Sum_probs=39.8
Q ss_pred hhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEecc
Q 025121 99 WEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG 164 (257)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 164 (257)
.....+....+.+...+- .+.+++|+|+|+|+.++-.++..... +....++|.++++++-
T Consensus 57 ~~G~~~~~~~i~~~~~~C-P~tkivl~GYSQGA~V~~~~~~~lg~-----~~~~~~~V~avvlfGd 116 (205)
T 2czq_A 57 AAGTADIIRRINSGLAAN-PNVCYILQGYSQGAAATVVALQQLGT-----SGAAFNAVKGVFLIGN 116 (205)
T ss_dssp HHHHHHHHHHHHHHHHHC-TTCEEEEEEETHHHHHHHHHHHHHCS-----SSHHHHHEEEEEEESC
T ss_pred HHHHHHHHHHHHHHHhhC-CCCcEEEEeeCchhHHHHHHHHhccC-----ChhhhhhEEEEEEEeC
Confidence 455566666666655443 34499999999999999988763200 0112467899988874
|
| >3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono- phosphorylated serine residue, secreted, phosphorylated Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB: 3gbs_A | Back alignment and structure |
|---|
Probab=96.06 E-value=0.072 Score=37.88 Aligned_cols=136 Identities=12% Similarity=0.038 Sum_probs=71.9
Q ss_pred eEEEEEccCCCCccc--------hHHHhhcCCCCceEEEccC--CCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025121 35 ATIVWLHGLGDNGSS--------WSQLLESLPLPNIKWICPT--APTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 35 ~~vi~~HG~~~~~~~--------~~~~~~~l~~~g~~v~~~d--~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
-.|||.-|-++.... ...+...+ .....+..++ +|-.-. + +. . ..........+
T Consensus 15 v~vi~ARGT~E~~g~G~~~G~~~~~~L~~~~-~~~v~v~~V~~~YpA~~~----------~-~~--~--~~~s~~~g~~~ 78 (187)
T 3qpd_A 15 ITFIFARASTEPGLLGISTGPAVCNRLKLAR-SGDVACQGVGPRYTADLP----------S-NA--L--PEGTSQAAIAE 78 (187)
T ss_dssp EEEEEECCTTCCTTTCSSHHHHHHHHHHHHS-TTCEEEEECCSSCCCCGG----------G-GG--S--TTSSCHHHHHH
T ss_pred eEEEEeeCCCCCCCCCccccHHHHHHHHHHc-CCCceEEeeCCcccCcCc----------c-cc--c--cccchhHHHHH
Confidence 467777776654421 12344455 3457788887 663110 0 00 0 00111223333
Q ss_pred HHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHh
Q 025121 105 SAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAAR 184 (257)
Q Consensus 105 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 184 (257)
....+.....+- +..+++|+|+|+|+.++-.++...+ ....++|.++++++-....... . ..+
T Consensus 79 ~~~~i~~~~~~C-P~tkivl~GYSQGA~V~~~~~~~l~-------~~~~~~V~avvlfGdP~~~~~~--g---~~p---- 141 (187)
T 3qpd_A 79 AQGLFEQAVSKC-PDTQIVAGGYSQGTAVMNGAIKRLS-------ADVQDKIKGVVLFGYTRNAQER--G---QIA---- 141 (187)
T ss_dssp HHHHHHHHHHHC-TTCEEEEEEETHHHHHHHHHHTTSC-------HHHHHHEEEEEEESCTTTTTTT--T---SCT----
T ss_pred HHHHHHHHHHhC-CCCcEEEEeeccccHHHHhhhhcCC-------HhhhhhEEEEEEeeCCccccCC--C---CCC----
Confidence 344444444433 3459999999999999998875321 0113678999988743321110 0 000
Q ss_pred hhcCCCEEEEccCCCCccc
Q 025121 185 RAASLPILLTHGLCDDVVP 203 (257)
Q Consensus 185 ~~~~~P~l~~~G~~D~~v~ 203 (257)
....-.++.++-..|.++.
T Consensus 142 ~~~~~k~~~~C~~gD~vC~ 160 (187)
T 3qpd_A 142 NFPKDKVKVYCAVGDLVCL 160 (187)
T ss_dssp TSCGGGEEEECCTTCGGGG
T ss_pred CCchhheeeecCCcCCccC
Confidence 1113357778888888774
|
| >1gxs_B P-(S)-hydroxymandelonitrIle lyase chain B; inhibitor complex, cyanogenesis mechanism; HET: NAG FUL DKA; 2.3A {Sorghum bicolor} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=95.08 E-value=0.037 Score=38.34 Aligned_cols=66 Identities=23% Similarity=0.295 Sum_probs=50.0
Q ss_pred cCCCEEEEccCCCCcccchhhHHHHHHhhhc--------------C----c----eeeEEEEecCCCCccCHHHHHHHHH
Q 025121 187 ASLPILLTHGLCDDVVPYKYGEKSANCLSIS--------------G----F----RHLTFKSFEGLGHYTVPKEMDEVCN 244 (257)
Q Consensus 187 ~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~--------------~----~----~~~~~~~~~g~~H~~~~~~~~~~~~ 244 (257)
...++||.+|+.|-+|+.-..+.+.+.+.-. + . .+.++..+.++||.+..+.++...+
T Consensus 65 ~girVliysGd~D~i~~~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~~vaG~~~~~~nLtf~~V~~AGHmVP~dqP~~al~ 144 (158)
T 1gxs_B 65 AGLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVTVRGAGHLVPVHRPAQAFL 144 (158)
T ss_dssp TTCEEEEEEETTCSSSCHHHHHHHHHTTCCCEEEEEEEEESSTTCCSEEEEEEEETTEEEEEETTCCSSHHHHCHHHHHH
T ss_pred cCCeEEEEecccCccCCcHHHHHHHHHCCCcccCCccceEECCCCCcccceEEEeCCEEEEEECCCcccCcccCcHHHHH
Confidence 4799999999999999998888888877421 1 0 1467889999999998776666666
Q ss_pred HHHHhcCc
Q 025121 245 WLTARLGL 252 (257)
Q Consensus 245 ~l~~~l~~ 252 (257)
.|.+++..
T Consensus 145 m~~~fl~g 152 (158)
T 1gxs_B 145 LFKQFLKG 152 (158)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHcC
Confidence 66665543
|
| >1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET: NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30 | Back alignment and structure |
|---|
Probab=94.81 E-value=0.078 Score=38.52 Aligned_cols=37 Identities=27% Similarity=0.328 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHH
Q 025121 102 LDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSAT 139 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~ 139 (257)
..+....+.+...+ ....+++|+|+|+|+.++-.++.
T Consensus 65 ~~~~~~~i~~~~~~-CP~tkivl~GYSQGA~V~~~~~~ 101 (207)
T 1qoz_A 65 TNAAAAAINNFHNS-CPDTQLVLVGYSQGAQIFDNALC 101 (207)
T ss_dssp HHHHHHHHHHHHHH-CTTSEEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh-CCCCcEEEEEeCchHHHHHHHHh
Confidence 34444444444433 33459999999999999998875
|
| >1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose, hydrolase; 0.90A {Penicillium purpurogenum} SCOP: c.69.1.30 PDB: 1bs9_A 2axe_A* | Back alignment and structure |
|---|
Probab=94.71 E-value=0.083 Score=38.38 Aligned_cols=37 Identities=19% Similarity=0.257 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHH
Q 025121 102 LDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSAT 139 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~ 139 (257)
..+....+.+...+ ....+++|+|+|+|+.++-.++.
T Consensus 65 ~~~~~~~i~~~~~~-CP~tkivl~GYSQGA~V~~~~~~ 101 (207)
T 1g66_A 65 IAAVASAVNSFNSQ-CPSTKIVLVGYSQGGEIMDVALC 101 (207)
T ss_dssp HHHHHHHHHHHHHH-STTCEEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-CCCCcEEEEeeCchHHHHHHHHh
Confidence 34444444444433 33459999999999999998875
|
| >2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP} | Back alignment and structure |
|---|
Probab=94.56 E-value=0.046 Score=43.14 Aligned_cols=22 Identities=27% Similarity=0.283 Sum_probs=19.8
Q ss_pred ceEEEEEechhHHHHHHHHHhc
Q 025121 120 VKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 120 ~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
.++.++|||+||.+|..++...
T Consensus 166 ~~i~vtGHSLGGAlA~l~a~~l 187 (346)
T 2ory_A 166 AKICVTGHSKGGALSSTLALWL 187 (346)
T ss_dssp EEEEEEEETHHHHHHHHHHHHH
T ss_pred ceEEEecCChHHHHHHHHHHHH
Confidence 4999999999999999998864
|
| >1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=93.55 E-value=0.12 Score=42.74 Aligned_cols=104 Identities=13% Similarity=0.077 Sum_probs=56.3
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCC-----------------CCceEEEccCCC-CCCcccCCCCcccccccCCCCCC
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLP-----------------LPNIKWICPTAP-TRPVAILGGFPCTAWFDVGELSD 93 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~-----------------~~g~~v~~~d~~-~~g~~~~~g~~~~~w~~~~~~~~ 93 (257)
...|+|||++|..+++..+..+.+ +. ..-..++.+|.| |-|++......... .+...
T Consensus 65 ~~~Pl~lwlnGGPG~SS~~g~~~e-~GP~~~~~~~~l~~n~~sw~~~~n~lfiDqPvGtGfSy~~~~~~~~-~~~~~--- 139 (483)
T 1ac5_A 65 VDRPLIIWLNGGPGCSSMDGALVE-SGPFRVNSDGKLYLNEGSWISKGDLLFIDQPTGTGFSVEQNKDEGK-IDKNK--- 139 (483)
T ss_dssp SSCCEEEEECCTTTBCTHHHHHHS-SSSEEECTTSCEEECTTCGGGTSEEEEECCSTTSTTCSSCCSSGGG-SCTTS---
T ss_pred cCCCEEEEECCCCchHhhhhhHhh-cCCeEecCCCceeecccchhhcCCeEEEecCCCccccCCcCccccc-ccccc---
Confidence 457999999999888776533221 11 123578888865 44443322100000 00000
Q ss_pred CCCCchhhHHHHHHHHHHHhccC--CCCceEEEEEechhHHHHHHHHHh
Q 025121 94 DGPEDWEGLDASAAHIANLLSTE--PADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
-.........+....+..++... ....+++|+|+|+||..+..++..
T Consensus 140 ~~~~~~~~a~~~~~fl~~~~~~fP~~~~~~~~i~GeSYgg~y~p~~a~~ 188 (483)
T 1ac5_A 140 FDEDLEDVTKHFMDFLENYFKIFPEDLTRKIILSGESYAGQYIPFFANA 188 (483)
T ss_dssp SCCSHHHHHHHHHHHHHHHHHHCTTGGGSEEEEEEEETHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHhChhhcCCCEEEEeccccccccHHHHHH
Confidence 00111222233344455555443 233599999999999999888764
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=92.98 E-value=0.15 Score=41.88 Aligned_cols=97 Identities=14% Similarity=0.054 Sum_probs=59.0
Q ss_pred CCceEEEEEccCCCCccchHHHhhc-----------CC------CCceEEEccCCC-CCCcccCCCCcccccccCCCCCC
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLES-----------LP------LPNIKWICPTAP-TRPVAILGGFPCTAWFDVGELSD 93 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~-----------l~------~~g~~v~~~d~~-~~g~~~~~g~~~~~w~~~~~~~~ 93 (257)
...|+|||+||..+++..+..+.+. +. .....++.+|.| |.|++.... ..
T Consensus 46 ~~~Pl~lwlnGGPG~Ss~~g~~~e~GP~~~~~~~~~l~~n~~sw~~~~~~lfiDqP~GtGfS~~~~------------~~ 113 (452)
T 1ivy_A 46 ENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVGFSYSDD------------KF 113 (452)
T ss_dssp GGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTTSTTCEESS------------CC
T ss_pred CCCCEEEEECCCCcHHHHHHHHHhcCCcEEeCCCceeeeCCCcccccccEEEEecCCCCCcCCcCC------------CC
Confidence 3579999999998887765333211 10 145688899964 444432110 00
Q ss_pred CCCCchhhHHHHHHHHHHHhccC--CCCceEEEEEechhHHHHHHHHHh
Q 025121 94 DGPEDWEGLDASAAHIANLLSTE--PADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
....+.....+....+.++++.. ....+++|+|+|+||..+..++..
T Consensus 114 ~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~ 162 (452)
T 1ivy_A 114 YATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVL 162 (452)
T ss_dssp CCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHH
T ss_pred CcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHH
Confidence 11122334455567777777663 334599999999999977666653
|
| >2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=91.73 E-value=0.022 Score=45.83 Aligned_cols=22 Identities=50% Similarity=0.548 Sum_probs=19.4
Q ss_pred ceEEEEEechhHHHHHHHHHhc
Q 025121 120 VKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 120 ~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
.+|.++|||+||.+|..++...
T Consensus 228 ~~I~vTGHSLGGALA~L~A~~L 249 (419)
T 2yij_A 228 VSITICGHSLGAALATLSATDI 249 (419)
Confidence 3799999999999999998754
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=91.29 E-value=0.26 Score=38.39 Aligned_cols=38 Identities=24% Similarity=0.116 Sum_probs=27.2
Q ss_pred ceEEEEEccCCCCcc----chHH---HhhcCCCCceEEEccCCCC
Q 025121 34 QATIVWLHGLGDNGS----SWSQ---LLESLPLPNIKWICPTAPT 71 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~----~~~~---~~~~l~~~g~~v~~~d~~~ 71 (257)
.|+||.+||.+++.. .|.. +.+.-.++|+.|+.|+...
T Consensus 221 ~~l~v~lHGc~~~~~~~g~~~~~~~~~~~~Ad~~~~iv~yP~~~~ 265 (318)
T 2d81_A 221 CSLHVALHGCLQSYSSIGSRFIQNTGYNKWADTNNMIILYPQAIP 265 (318)
T ss_dssp EEEEEEECCTTCSHHHHTTHHHHHSCHHHHHTTTTEEEEECCBCC
T ss_pred CCEEEEecCCCCCcchhhhhhhcccChHHHHHhCCeEEEeCCCcC
Confidence 689999999999985 4322 2222235799999999654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 257 | ||||
| d1fj2a_ | 229 | c.69.1.14 (A:) Acyl protein thioesterase 1 {Human | 8e-38 | |
| d1auoa_ | 218 | c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluor | 1e-37 | |
| d1ufoa_ | 238 | c.69.1.27 (A:) Hypothetical protein TT1662 {Thermu | 4e-18 | |
| d2r8ba1 | 203 | c.69.1.14 (A:44-246) Uncharacterized protein Atu24 | 2e-12 | |
| d2h1ia1 | 202 | c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cer | 2e-12 | |
| d3b5ea1 | 209 | c.69.1.14 (A:7-215) Uncharacterized protein Mll837 | 4e-10 | |
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 4e-06 | |
| d1pv1a_ | 299 | c.69.1.34 (A:) Hypothetical esterase YJL068C {Bake | 9e-06 | |
| d2jbwa1 | 360 | c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine h | 3e-04 | |
| d2d81a1 | 318 | c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymer | 7e-04 | |
| d1l7aa_ | 318 | c.69.1.25 (A:) Cephalosporin C deacetylase {Bacill | 0.001 | |
| d1r3da_ | 264 | c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio | 0.002 |
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 229 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 130 bits (327), Expect = 8e-38
Identities = 71/231 (30%), Positives = 111/231 (48%), Gaps = 21/231 (9%)
Query: 25 HVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTA 84
+V K A +++LHGLGD G W++ + +IK+ICP AP RPV + +
Sbjct: 12 AIVPAARKATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPS 71
Query: 85 WFDVGELSDDGPEDWEGLDASAAHIANLLSTEPADV----KVGIGGFSMGAAVALYSATC 140
WFD+ LS D ED G+ +A +I L+ E + ++ +GGFS G A++LY+A
Sbjct: 72 WFDIIGLSPDSQEDESGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALT 131
Query: 141 CALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDD 200
L V LS WLP + G + IL HG CD
Sbjct: 132 -----------TQQKLAGVTALSCWLPLRASFPQGPIGGAN-----RDISILQCHGDCDP 175
Query: 201 VVPYKYGEKSANCL-SISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250
+VP +G + L ++ ++TFK++EG+ H + +EM +V ++ L
Sbjct: 176 LVPLMFGSLTVEKLKTLVNPANVTFKTYEGMMHSSCQQEMMDVKQFIDKLL 226
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} Length = 218 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Score = 129 bits (325), Expect = 1e-37
Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 26 VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLP--LPNIKWICPTAPTRPVAILGGFPCT 83
+++P A ++WLHGLG + + + E+L L +++ P APTRPV I GG+
Sbjct: 6 ILQPAKPADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMP 65
Query: 84 AWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPA----DVKVGIGGFSMGAAVALYSAT 139
+W+D+ +S E L+ SA + +L+ + ++ + GFS G AV ++A
Sbjct: 66 SWYDIKAMSPARSISLEELEVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAF 125
Query: 140 CCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCD 199
+ L V+ LS + P E + +P L HG D
Sbjct: 126 IN----------WQGPLGGVIALSTYAP-------TFGDELELSASQQRIPALCLHGQYD 168
Query: 200 DVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251
DVV G + L G T++ + GH +P+E+ ++ WL ARLG
Sbjct: 169 DVVQNAMGRSAFEHLKSRGVTV-TWQEYPM-GHEVLPQEIHDIGAWLAARLG 218
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} Length = 238 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Score = 78.7 bits (192), Expect = 4e-18
Identities = 43/239 (17%), Positives = 62/239 (25%), Gaps = 8/239 (3%)
Query: 13 RAARRTFEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTR 72
R R T G + + R +A ++ LHGL + LL + AP
Sbjct: 4 RTERLTLA-GLSVLARIPEAPKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRH 62
Query: 73 PVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAA 132
+ V E+ E A + + G S+GA
Sbjct: 63 GEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGL-----PLFLAGGSLGAF 117
Query: 133 VALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPIL 192
VA R + + + P+L
Sbjct: 118 VAHLLLAEGFRPRGVLAFIGSGFPMKLPQGQVVEDPGVLALYQAPPATRGEAYGGV-PLL 176
Query: 193 LTHGLCDDVVPYKYGEKSANCLSISGFRH-LTFKSFEGLGHYTVPKEMDEVCNWLTARL 250
HG D +VP EK+ L L EG GH P +L L
Sbjct: 177 HLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWL 235
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} Length = 203 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 62.4 bits (150), Expect = 2e-12
Identities = 32/227 (14%), Positives = 53/227 (23%), Gaps = 36/227 (15%)
Query: 25 HVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTA 84
H R V LHG G + + + L P + P
Sbjct: 8 HKSRAGVAGAPLFVLLHGTGGDENQFFDFGARLL-PQATILSPVGD---------VSEHG 57
Query: 85 WFDVGELSDDGPEDWEGLDASAAHIANLLSTEPADV---KVGIGGFSMGAAVALYSATCC 141
+ +G D L+ + +A+ + V GFS GA +
Sbjct: 58 AARFFRRTGEGVYDMVDLERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQ 117
Query: 142 ALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDV 201
+ + + + D +
Sbjct: 118 PELFDAAVLMHPLIPFEPKISPAKPTRRVLITAGER---------------------DPI 156
Query: 202 VPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTA 248
P + + L G G GH E+D V +L A
Sbjct: 157 CPVQLTKALEESLKAQGGTV-ETVWHPG-GHEIRSGEIDAVRGFLAA 201
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} Length = 202 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Score = 62.1 bits (149), Expect = 2e-12
Identities = 31/223 (13%), Positives = 51/223 (22%), Gaps = 29/223 (13%)
Query: 25 HVVRP-KGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCT 83
HV + K + ++ LHG G N L E + + G P
Sbjct: 4 HVFQKGKDTSKPVLLLLHGTGGNELDLLPLAEIVD-SEASVLSVRGNVLE----NGMPRF 58
Query: 84 AWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCAL 143
+G D E L + L + + + A
Sbjct: 59 FRRL-----AEGIFDEEDLIFRTKELNEFLDEAAKE------YKFDRNNIVAIGYSNGAN 107
Query: 144 GRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVP 203
Y L+ V +P + G D +
Sbjct: 108 IAASLLFHYENALKGAVLHHPMVPRRGMQLANLAGKSVFIAAGT----------NDPICS 157
Query: 204 YKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWL 246
E+ L + T GH E+++ W
Sbjct: 158 SAESEELKVLLENANANV-TMHWENR-GHQLTMGEVEKAKEWY 198
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} Length = 209 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Score = 55.8 bits (133), Expect = 4e-10
Identities = 30/229 (13%), Positives = 54/229 (23%), Gaps = 39/229 (17%)
Query: 25 HVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTA 84
++ + + + LHG G + ++ L + P + P
Sbjct: 14 RLLGAGKESRECLFLLHGSGVDETTLVPLARRIA-PTATLVAARGR---------IPQED 63
Query: 85 WFDVGELSDDGPEDWEGLDASAAHIANLLSTEPADV-----KVGIGGFSMGAAVALYSAT 139
F E D + + + A A A + G+S GA +
Sbjct: 64 GFRWFERIDPTRFEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLML 123
Query: 140 CCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCD 199
+ + R L + G + G D
Sbjct: 124 -----LHPGIV------RLAALLRPMPVLDHVPATDLAGIRTL----------IIAGAAD 162
Query: 200 DVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTA 248
+ + LS G + GH + V WL
Sbjct: 163 ETYG-PFVPALVTLLSRHGAEV-DARIIPS-GHDIGDPDAAIVRQWLAG 208
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 44.5 bits (104), Expect = 4e-06
Identities = 22/240 (9%), Positives = 46/240 (19%), Gaps = 49/240 (20%)
Query: 23 RTHVVRPKG---KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGG 79
PK TI+ G ++ L E L
Sbjct: 18 HVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLSTNGF-----------HVFRYD 66
Query: 80 FPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSA- 138
G + + ++ +G+ S+ A VA
Sbjct: 67 SLHHVGLSSGSIDEFTMTTG----KNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVIS 122
Query: 139 TCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--------------------------RNL 172
+ L +
Sbjct: 123 DLELSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHH 182
Query: 173 RNKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGH 232
+ ++ + + S+P++ DD V + + + + G H
Sbjct: 183 WDTLDSTLDKVAN-TSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYS---LLGSSH 238
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 43.7 bits (102), Expect = 9e-06
Identities = 40/257 (15%), Positives = 66/257 (25%), Gaps = 33/257 (12%)
Query: 28 RPKGKHQATIVWLHGLGDNGSSWSQ---LLESLPLPNIKWICPTAPTRPVAILGGFPCTA 84
P+ K T+ +L GL + S+ + P R + P +
Sbjct: 43 FPRNKRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVAND-PEGS 101
Query: 85 WFDVGELS---DDGPEDWEGLDASAAHIANLLS-------------TEPADVKVGIGGFS 128
W + E + +I L V I G S
Sbjct: 102 WDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHS 161
Query: 129 MGAAVALYSATCCAL-GRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHE------ 181
MG A+ RY + + + G L +
Sbjct: 162 MGGYGAICGYLKGYSGKRYKSCSAFAPIVNPSNVPWGQKAFKGYLGEEKAQWEAYDPCLL 221
Query: 182 --AARRAASLPILLTHGLCDDVVP-YKYGEKSANCLSISGFRH-LTFKSFEGLGH--YTV 235
R IL+ G D + + E + + ++ + K G H Y V
Sbjct: 222 IKNIRHVGDDRILIHVGDSDPFLEEHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYYFV 281
Query: 236 PKEMDEVCNWLTARLGL 252
+ E + LGL
Sbjct: 282 STFVPEHAEFHARNLGL 298
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} Length = 360 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Score = 39.2 bits (90), Expect = 3e-04
Identities = 39/247 (15%), Positives = 70/247 (28%), Gaps = 29/247 (11%)
Query: 24 THVVRPKGKHQA-TIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPC 82
+V P+G ++ L GL Q+ + + P
Sbjct: 120 VYVRIPEGPGPHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGP------------ 167
Query: 83 TAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCA 142
D+E ++ + L D +G+ G S+G AL SA C
Sbjct: 168 --GQGEMFEYKRIAGDYEKYTSAVVDLLTKLEAIRND-AIGVLGRSLGGNYALKSAACEP 224
Query: 143 LGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASL------------P 190
+ +L + S +K++ EA + P
Sbjct: 225 RLAACISWGGFSDLDYWDLETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIACP 284
Query: 191 ILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250
+ HG+ D VP + + + + K + H + E+ +WL L
Sbjct: 285 TYILHGV-HDEVPLSFVDTVLELVPAEHLNLVVEKDGDHCCHNLGIRPRLEMADWLYDVL 343
Query: 251 GLEGSRA 257
A
Sbjct: 344 VAGKKVA 350
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Score = 38.1 bits (88), Expect = 7e-04
Identities = 17/125 (13%), Positives = 33/125 (26%), Gaps = 14/125 (11%)
Query: 121 KVGIGGFSMGAAVALYSATC------CALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN 174
V + G + G +A G + G PY +
Sbjct: 12 SVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFA-GGPYDCARNQYYTSCMYNGYPSITTP 70
Query: 175 KIEGSHEAARRAASL------PILLTHGLCDDVVPYKYGEKSANCL-SISGFRHLTFKSF 227
+ + AS+ I + G D V + L + ++++ +
Sbjct: 71 TANMKSWSGNQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTT 130
Query: 228 EGLGH 232
G H
Sbjct: 131 TGAVH 135
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Score = 37.1 bits (84), Expect = 0.001
Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 4/61 (6%)
Query: 190 PILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTAR 249
P+L++ GL D V P + N L K + GH +P E +
Sbjct: 260 PVLMSIGLIDKVTPPSTVFAAYNHLETKK----ELKVYRYFGHEYIPAFQTEKLAFFKQI 315
Query: 250 L 250
L
Sbjct: 316 L 316
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Score = 36.4 bits (82), Expect = 0.002
Identities = 11/49 (22%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Query: 22 GRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAP 70
+ H +P + +V +HGL +G+ W +L L + P
Sbjct: 5 NQLHFAKPTAR-TPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLP 52
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 257 | |||
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 100.0 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.97 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 99.95 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.95 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.95 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.95 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 99.94 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.94 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.94 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 99.94 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 99.94 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 99.94 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.94 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 99.94 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.94 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 99.94 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 99.94 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.93 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 99.93 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.93 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 99.93 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 99.93 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 99.93 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 99.93 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 99.93 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 99.93 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.93 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.93 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 99.93 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 99.93 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 99.92 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.92 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.92 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.92 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 99.92 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.91 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.91 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.9 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.9 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 99.89 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.89 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.89 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.88 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 99.86 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.85 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.83 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 99.83 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.82 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 99.81 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 99.81 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.8 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 99.77 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 99.76 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.76 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 99.75 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.75 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.72 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.7 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 99.7 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.69 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 99.64 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 99.62 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 99.62 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 99.61 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 99.61 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 99.61 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.6 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 99.6 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 99.6 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 99.57 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.53 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 99.48 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.48 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 99.47 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 99.43 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 99.4 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 99.39 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 99.34 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 99.25 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 99.19 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 98.88 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 98.75 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 98.71 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 98.63 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.46 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 98.38 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 98.38 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 98.34 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 98.31 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 98.3 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 98.28 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 98.19 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 98.16 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 98.13 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 98.05 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 98.04 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 97.99 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 97.98 | |
| d1cexa_ | 197 | Cutinase {Fungus (Fusarium solani), subsp. pisi [T | 97.0 | |
| d1uwca_ | 261 | Feruloyl esterase A {Aspergillus niger [TaxId: 506 | 96.76 | |
| d1lgya_ | 265 | Triacylglycerol lipase {Rhizopus niveus [TaxId: 48 | 96.68 | |
| d1tiba_ | 269 | Triacylglycerol lipase {Thermomyces lanuginosus, f | 96.67 | |
| d3tgla_ | 265 | Triacylglycerol lipase {Rhizomucor miehei [TaxId: | 96.56 | |
| d1tiaa_ | 271 | Triacylglycerol lipase {Penicillium camembertii [T | 96.49 | |
| d1qoza_ | 207 | Acetylxylan esterase {Trichoderma reesei [TaxId: 5 | 95.38 | |
| d1g66a_ | 207 | Acetylxylan esterase {Penicillium purpurogenum [Ta | 93.8 |
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-33 Score=208.10 Aligned_cols=213 Identities=33% Similarity=0.590 Sum_probs=171.3
Q ss_pred CceEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhh
Q 025121 22 GRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEG 101 (257)
Q Consensus 22 ~~~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 101 (257)
+..++.++.+++.++|||+||+|++..+|..+...+...++.+++++.|.++.....+.....||+..........+...
T Consensus 9 pl~~~~p~~~~~~~~VI~lHG~G~~~~~~~~~~~~l~~~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 88 (229)
T d1fj2a_ 9 PLPAIVPAARKATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESG 88 (229)
T ss_dssp CCCEEECCSSCCSEEEEEECCSSSCHHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHH
T ss_pred CCCcccCCCCCCCCEEEEEcCCCCCHHHHHHHHHHhcCCCCEEEeCCCCCCccccCCCcccccccccccccccchhhhHH
Confidence 34466677777888999999999999999999999888899999999998776666666677898876555555555666
Q ss_pred HHHHHHHHHHHhcc----CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccc
Q 025121 102 LDASAAHIANLLST----EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIE 177 (257)
Q Consensus 102 ~~~~~~~~~~~~~~----~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 177 (257)
+.+..+.+..+++. ....++|+++|+|+||.+|+.++.+ +++.++++++++|+++....+.....
T Consensus 89 i~~~~~~l~~li~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~-----------~~~~~~gvi~~sg~lp~~~~~~~~~~ 157 (229)
T d1fj2a_ 89 IKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALT-----------TQQKLAGVTALSCWLPLRASFPQGPI 157 (229)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTT-----------CSSCCSEEEEESCCCTTGGGSCSSCC
T ss_pred HHHHHHHHHHHhhhhhhcCCCccceeeeecccchHHHHHHHHh-----------hccccCcccccccccccccccccccc
Confidence 66666666555432 2345699999999999999999984 48999999999999886655443321
Q ss_pred cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhc--CceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 178 GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSIS--GFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 178 ~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~--~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
. ....++|++++||++|.+||++.++++++.+++. +. ++++++++|.||.+..+.++.+.+||.+.|.
T Consensus 158 ~-----~~~~~~Pvli~hG~~D~~vp~~~~~~~~~~L~~~~~~~-~v~~~~~~g~gH~i~~~~~~~~~~wL~~~Lp 227 (229)
T d1fj2a_ 158 G-----GANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPA-NVTFKTYEGMMHSSCQQEMMDVKQFIDKLLP 227 (229)
T ss_dssp C-----STTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGG-GEEEEEETTCCSSCCHHHHHHHHHHHHHHSC
T ss_pred c-----cccccCceeEEEcCCCCeeCHHHHHHHHHHHHhcCCCC-ceEEEEeCCCCCccCHHHHHHHHHHHHhHCc
Confidence 1 1234789999999999999999999999999873 33 7899999999999999999999999999885
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.97 E-value=9.5e-30 Score=189.09 Aligned_cols=209 Identities=30% Similarity=0.568 Sum_probs=160.4
Q ss_pred eEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCC--CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhh
Q 025121 24 THVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPL--PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEG 101 (257)
Q Consensus 24 ~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~--~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 101 (257)
.++++|.++++++|||+||+|++..+|..+++.|.. .++.+++++.|........+.....||+............+.
T Consensus 4 p~~i~p~~~~~~~Vi~lHG~G~~~~~~~~~~~~l~~~~~~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 83 (218)
T d1auoa_ 4 PLILQPAKPADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEE 83 (218)
T ss_dssp CEEECCSSCCSEEEEEECCTTCCTTTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHH
T ss_pred CEeeCCCCCCCeEEEEEcCCCCChhhHHHHHHHHHHhCCCcEEEccCCCccccccCCCcccCcccccccccccccchHHH
Confidence 456677778889999999999999998887776642 478889998876544455566667888775544444445555
Q ss_pred HHHHHHHHHHHhcc----CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccc
Q 025121 102 LDASAAHIANLLST----EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIE 177 (257)
Q Consensus 102 ~~~~~~~~~~~~~~----~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 177 (257)
+......+.++++. ..+.++++++|+||||.+++.++.. ..+..++++++++++++........
T Consensus 84 ~~~~~~~v~~li~~~~~~~i~~~ri~l~GfSqGg~~a~~~~l~----------~~~~~~~~~v~~~g~~~~~~~~~~~-- 151 (218)
T d1auoa_ 84 LEVSAKMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFI----------NWQGPLGGVIALSTYAPTFGDELEL-- 151 (218)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHT----------TCCSCCCEEEEESCCCTTCCTTCCC--
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcceEEeeeCcchHHHHHHHHh----------cccccceeeeeccccCccccccccc--
Confidence 66655555555432 2344699999999999999988764 2367899999999988754322221
Q ss_pred cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 178 GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 178 ~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
.....++|++++||++|.+||.+.++++++.+++.+. ++++++++ .+|.+..+.++.+.+||.+.|+
T Consensus 152 -----~~~~~~~pvl~~hG~~D~vvp~~~~~~~~~~L~~~g~-~~~~~~~~-~gH~i~~~~~~~i~~wl~~~lg 218 (218)
T d1auoa_ 152 -----SASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGV-TVTWQEYP-MGHEVLPQEIHDIGAWLAARLG 218 (218)
T ss_dssp -----CHHHHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTC-CEEEEEES-CSSSCCHHHHHHHHHHHHHHHC
T ss_pred -----chhccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCC-CEEEEEEC-CCCccCHHHHHHHHHHHHHhcC
Confidence 1234578999999999999999999999999999988 89999998 5999999999999999998874
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=99.95 E-value=4.8e-27 Score=181.82 Aligned_cols=190 Identities=17% Similarity=0.170 Sum_probs=139.8
Q ss_pred CCCceEEEEEccCCCCccchH-HHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHH
Q 025121 31 GKHQATIVWLHGLGDNGSSWS-QLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHI 109 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~-~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 109 (257)
++..|+|||+||++.+...|. .+.+.|...||+|+++|+||+|.+..... .....++.+.++++
T Consensus 19 ~~~~p~vvl~HG~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~~---------------~~~~~~~~~~~~d~ 83 (297)
T d1q0ra_ 19 DPADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDF---------------AAHPYGFGELAADA 83 (297)
T ss_dssp CTTSCEEEEECCTTCCGGGSCHHHHHHHHTTTCEEEEECCTTSTTSCCCCT---------------TTSCCCHHHHHHHH
T ss_pred CCCCCEEEEECCCCcChhHHHHHHHHHHHhCCCEEEEEeCCCCcccccccc---------------cccccccchhhhhh
Confidence 345789999999999998884 57777777899999999998875532211 11112455666667
Q ss_pred HHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhh-----------------
Q 025121 110 ANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL----------------- 172 (257)
Q Consensus 110 ~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----------------- 172 (257)
..+++..... +++++||||||.+++.+|.+. |+++.+++++++........
T Consensus 84 ~~ll~~l~~~-~~~lvGhS~Gg~~a~~~a~~~-----------P~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (297)
T d1q0ra_ 84 VAVLDGWGVD-RAHVVGLSMGATITQVIALDH-----------HDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLP 151 (297)
T ss_dssp HHHHHHTTCS-SEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSC
T ss_pred cccccccccc-ceeeccccccchhhhhhhccc-----------ccceeeeEEEccccccccchhhhHHHhhhhhhhhhhh
Confidence 7777665544 899999999999999999954 89999999886532111000
Q ss_pred ------------------------hhc------c---------------------------------------ccchHHH
Q 025121 173 ------------------------RNK------I---------------------------------------EGSHEAA 183 (257)
Q Consensus 173 ------------------------~~~------~---------------------------------------~~~~~~~ 183 (257)
... . .......
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (297)
T d1q0ra_ 152 GPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAE 231 (297)
T ss_dssp CCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGGGGG
T ss_pred hhhHHHHHHHHHhccccchhhHHHHHHHHHHhhhccccccchHHHHHHHHHHhhhhccccchhhhhhhhhhhccccchhh
Confidence 000 0 0001113
Q ss_pred hhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcCc
Q 025121 184 RRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLGL 252 (257)
Q Consensus 184 ~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 252 (257)
...+++|+++++|++|.++|++.++.+.+.++ +.++++++++||.++.+..+.+.++|.++++.
T Consensus 232 l~~i~~Pvlvi~G~~D~~~~~~~~~~~~~~~p-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~~l~~ 295 (297)
T d1q0ra_ 232 LREVTVPTLVIQAEHDPIAPAPHGKHLAGLIP-----TARLAEIPGMGHALPSSVHGPLAEVILAHTRS 295 (297)
T ss_dssp GGGCCSCEEEEEETTCSSSCTTHHHHHHHTST-----TEEEEEETTCCSSCCGGGHHHHHHHHHHHHHH
T ss_pred hhccCCceEEEEeCCCCCCCHHHHHHHHHhCC-----CCEEEEECCCCCcchhhCHHHHHHHHHHHHHh
Confidence 45678999999999999999999998888886 67999999999999988888888888887753
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.95 E-value=3.3e-27 Score=177.50 Aligned_cols=203 Identities=18% Similarity=0.092 Sum_probs=138.1
Q ss_pred CCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025121 31 GKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
++++|+||++||++++...|..+++.|++.||.|+++|+|++|.+...-.. .................+..+.
T Consensus 21 ~~~~~~vl~lHG~~~~~~~~~~~~~~la~~G~~V~~~D~~g~g~s~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 93 (238)
T d1ufoa_ 21 EAPKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPS-------SKSPRYVEEVYRVALGFKEEAR 93 (238)
T ss_dssp SSCCEEEEEECCTTCCHHHHHHTSTTTGGGTEEEEECCCTTSTTSSCCCCC-------TTSTTHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEeCCCCCCHHHHHHHHHHHHHCCCEEEEecCCCCCCCcccccc-------cccchhhhhhhhhHHhHHHHHH
Confidence 456799999999999999999999999999999999999988755422110 0000000001112222233333
Q ss_pred HHhcc--CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhc----------c-c
Q 025121 111 NLLST--EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNK----------I-E 177 (257)
Q Consensus 111 ~~~~~--~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~----------~-~ 177 (257)
.++.. .....+++++|+|+||.+++.++.+. +.+.+++.+.+........... . .
T Consensus 94 ~~~~~~~~~~~~~v~~~G~S~Gg~~a~~~~~~~------------p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (238)
T d1ufoa_ 94 RVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEG------------FRPRGVLAFIGSGFPMKLPQGQVVEDPGVLALYQA 161 (238)
T ss_dssp HHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTT------------CCCSCEEEESCCSSCCCCCTTCCCCCHHHHHHHHS
T ss_pred HHhhhccccCCceEEEEEecccHHHHHHHHhcC------------cchhheeeeeeeccccccccccccccccccchhhh
Confidence 33221 11234999999999999999998853 3455555554432211111100 0 1
Q ss_pred cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCc-eeeEEEEecCCCCccCHHHHHHHHHHHHHhcCc
Q 025121 178 GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGF-RHLTFKSFEGLGHYTVPKEMDEVCNWLTARLGL 252 (257)
Q Consensus 178 ~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~-~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~ 252 (257)
..........++|++++||++|.++|++.+.++++.+++.+. .+++++.++|+||.+.++.++.+.+|+.++|..
T Consensus 162 ~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~g~gH~~~~~~~~~~~~f~~~~l~~ 237 (238)
T d1ufoa_ 162 PPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGHTLTPLMARVGLAFLEHWLEA 237 (238)
T ss_dssp CGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCSSCCHHHHHHHHHHHHHHHHC
T ss_pred hhhhhhhhhcCCCeEEEEcCCCCccCHHHHHHHHHHHHhcCCCceEEEEEECCCCCccCHHHHHHHHHHHHHHhcC
Confidence 111123345678999999999999999999999999988765 257899999999999999999999999998864
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=99.95 E-value=3.9e-27 Score=181.10 Aligned_cols=192 Identities=18% Similarity=0.175 Sum_probs=135.8
Q ss_pred CCCCCCceEEEEEccCCCCccc---hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025121 28 RPKGKHQATIVWLHGLGDNGSS---WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 28 ~~~~~~~~~vi~~HG~~~~~~~---~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
..+.+..|+|||+||++++... |..+++.|+ .+|+|+++|+||+|.+..... ........+.+
T Consensus 20 ~~G~~~~p~ivllHG~~~~~~~~~~~~~~~~~L~-~~~~vi~~D~~G~G~S~~~~~-------------~~~~~~~~~~~ 85 (281)
T d1c4xa_ 20 VAGDPQSPAVVLLHGAGPGAHAASNWRPIIPDLA-ENFFVVAPDLIGFGQSEYPET-------------YPGHIMSWVGM 85 (281)
T ss_dssp EESCTTSCEEEEECCCSTTCCHHHHHGGGHHHHH-TTSEEEEECCTTSTTSCCCSS-------------CCSSHHHHHHH
T ss_pred EEecCCCCEEEEECCCCCCCcHHHHHHHHHHHHh-CCCEEEEEeCCCCcccccccc-------------ccccchhhHHH
Confidence 3444567899999999876654 667778886 689999999998876532211 01112345566
Q ss_pred HHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh----hh-------
Q 025121 105 SAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN----LR------- 173 (257)
Q Consensus 105 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~------- 173 (257)
.++++.+++++.... +++++||||||.+++.++.+. |+++++++++++....... ..
T Consensus 86 ~~~~i~~~i~~~~~~-~~~lvGhS~Gg~ia~~~a~~~-----------p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~ 153 (281)
T d1c4xa_ 86 RVEQILGLMNHFGIE-KSHIVGNSMGGAVTLQLVVEA-----------PERFDKVALMGSVGAPMNARPPELARLLAFYA 153 (281)
T ss_dssp HHHHHHHHHHHHTCS-SEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESCCSSCCSSCCHHHHHHHTGGG
T ss_pred hhhhccccccccccc-cceeccccccccccccccccc-----------cccccceEEeccccCccccchhHHHHHHHhhh
Confidence 677777777665444 899999999999999999964 8999999988764211100 00
Q ss_pred ------------hcc------------------------------------------ccchHHHhhhcCCCEEEEccCCC
Q 025121 174 ------------NKI------------------------------------------EGSHEAARRAASLPILLTHGLCD 199 (257)
Q Consensus 174 ------------~~~------------------------------------------~~~~~~~~~~~~~P~l~~~G~~D 199 (257)
... ..........+++|+++++|++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 233 (281)
T d1c4xa_ 154 DPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQD 233 (281)
T ss_dssp SCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTC
T ss_pred hcccchhhhhhhhhcccccccchhhhHHHHHhhhcccchhhhhhhhhhhHHhhhhhhhccchhhhhhhccceEEEEeCCC
Confidence 000 00011134557899999999999
Q ss_pred CcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 200 DVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 200 ~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
.++|++.++.+.+.++ +.++++++++||+.+.+..+.+.+-|.++|
T Consensus 234 ~~~~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl 279 (281)
T d1c4xa_ 234 RIVPLDTSLYLTKHLK-----HAELVVLDRCGHWAQLERWDAMGPMLMEHF 279 (281)
T ss_dssp SSSCTHHHHHHHHHCS-----SEEEEEESSCCSCHHHHSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHCC-----CCEEEEECCCCCchHHhCHHHHHHHHHHHh
Confidence 9999999999998886 678999999999998666666655555554
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.95 E-value=6.5e-27 Score=171.68 Aligned_cols=191 Identities=16% Similarity=0.145 Sum_probs=140.2
Q ss_pred eCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025121 27 VRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 27 ~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
.+..++++|+||++||+|++...|..+++.+. .++.|++++.+..+... ..|+.... .......+.....
T Consensus 7 ~~~~~~~~P~vi~lHG~g~~~~~~~~~~~~l~-~~~~vv~p~~~~~~~~~------~~~~~~~~---~~~~~~~~~~~~~ 76 (202)
T d2h1ia1 7 QKGKDTSKPVLLLLHGTGGNELDLLPLAEIVD-SEASVLSVRGNVLENGM------PRFFRRLA---EGIFDEEDLIFRT 76 (202)
T ss_dssp ECCSCTTSCEEEEECCTTCCTTTTHHHHHHHH-TTSCEEEECCSEEETTE------EESSCEEE---TTEECHHHHHHHH
T ss_pred CCCCCCCCCEEEEECCCCCCHHHHHHHHHHhc-cCCceeeecccccCCCC------ccccccCC---CCCCchHHHHHHH
Confidence 34445678999999999999999999999887 68889998865321111 11111100 0111222223333
Q ss_pred H----HHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchH
Q 025121 107 A----HIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHE 181 (257)
Q Consensus 107 ~----~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 181 (257)
+ .+..+.++. ....+++++|+|+||.+++.++.+. +..+++++++++.++.......
T Consensus 77 ~~~~~~i~~~~~~~~~d~~~i~~~G~S~Gg~~a~~la~~~-----------~~~~~~~~~~~~~~~~~~~~~~------- 138 (202)
T d2h1ia1 77 KELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHY-----------ENALKGAVLHHPMVPRRGMQLA------- 138 (202)
T ss_dssp HHHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHC-----------TTSCSEEEEESCCCSCSSCCCC-------
T ss_pred HHHHHHHHHHHHhccccccceeeecccccchHHHHHHHhc-----------cccccceeeecCCCCccccccc-------
Confidence 3 333333333 3446999999999999999999964 8899999999998765432222
Q ss_pred HHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 182 AARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 182 ~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
.....|++++||++|.+||++.++++++.+++.+. +++++.+|+ ||.+..+.++.+.+||.+.+
T Consensus 139 ---~~~~~~~~i~~G~~D~~vp~~~~~~~~~~l~~~g~-~~~~~~~~g-gH~~~~~~~~~~~~wl~k~f 202 (202)
T d2h1ia1 139 ---NLAGKSVFIAAGTNDPICSSAESEELKVLLENANA-NVTMHWENR-GHQLTMGEVEKAKEWYDKAF 202 (202)
T ss_dssp ---CCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTC-EEEEEEESS-TTSCCHHHHHHHHHHHHHHC
T ss_pred ---ccccchhhcccccCCCccCHHHHHHHHHHHHHCCC-CEEEEEECC-CCcCCHHHHHHHHHHHHHhC
Confidence 23578999999999999999999999999999988 899999996 89999999999999999864
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=99.94 E-value=1.1e-26 Score=177.13 Aligned_cols=190 Identities=20% Similarity=0.145 Sum_probs=132.2
Q ss_pred EEeCCCCCCceEEEEEccCCCCccc---hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhh
Q 025121 25 HVVRPKGKHQATIVWLHGLGDNGSS---WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEG 101 (257)
Q Consensus 25 ~~~~~~~~~~~~vi~~HG~~~~~~~---~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 101 (257)
+.|...++. |+|||+||++++... |..++..|+ .+|+|+++|+||||.+.... ....
T Consensus 14 l~y~~~G~g-~~vvllHG~~~~~~~~~~~~~~~~~l~-~~~~v~~~D~~G~G~S~~~~------------------~~~~ 73 (268)
T d1j1ia_ 14 TRYLEAGKG-QPVILIHGGGAGAESEGNWRNVIPILA-RHYRVIAMDMLGFGKTAKPD------------------IEYT 73 (268)
T ss_dssp EEEEEECCS-SEEEEECCCSTTCCHHHHHTTTHHHHT-TTSEEEEECCTTSTTSCCCS------------------SCCC
T ss_pred EEEEEEcCC-CeEEEECCCCCCccHHHHHHHHHHHHh-cCCEEEEEcccccccccCCc------------------cccc
Confidence 334444443 579999999887654 566777776 69999999999887543211 1223
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhh---hhcc--
Q 025121 102 LDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL---RNKI-- 176 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~-- 176 (257)
....+.++.++++......+++++||||||.+++.++.+. |++++++|++++........ ....
T Consensus 74 ~~~~~~~~~~~i~~l~~~~~~~liG~S~Gg~ia~~~a~~~-----------p~~v~~lil~~~~~~~~~~~~~~~~~~~~ 142 (268)
T d1j1ia_ 74 QDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLH-----------SELVNALVLMGSAGLVVEIHEDLRPIINY 142 (268)
T ss_dssp HHHHHHHHHHHHHHSCCSSCEEEEEEHHHHHHHHHHHHHC-----------GGGEEEEEEESCCBCCCC----------C
T ss_pred cccccccchhhHHHhhhcccceeeeccccccccchhhccC-----------hHhhheeeecCCCccccccchhhhhhhhh
Confidence 4555666677776655555899999999999999999964 89999999887642111000 0000
Q ss_pred ------------------------------------------------------ccchHHHhhhcCCCEEEEccCCCCcc
Q 025121 177 ------------------------------------------------------EGSHEAARRAASLPILLTHGLCDDVV 202 (257)
Q Consensus 177 ------------------------------------------------------~~~~~~~~~~~~~P~l~~~G~~D~~v 202 (257)
..........+++|+++++|++|.++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~ 222 (268)
T d1j1ia_ 143 DFTREGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVV 222 (268)
T ss_dssp CSCHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSS
T ss_pred hhhhhhhHHHHHHHhhhhhhhhhhhhHHHHHhhhhhhhhhhhhhhhhhhhccccccchhhhHhhCCCCEEEEEeCCCCCC
Confidence 00011134567899999999999999
Q ss_pred cchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 203 PYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 203 ~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
|++.++.+.+.++ ++++++++++||.++.+..+.+.+.+.++|
T Consensus 223 ~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~e~p~~~~~~i~~FL 265 (268)
T d1j1ia_ 223 PVETAYKFLDLID-----DSWGYIIPHCGHWAMIEHPEDFANATLSFL 265 (268)
T ss_dssp CHHHHHHHHHHCT-----TEEEEEESSCCSCHHHHSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCC-----CCEEEEECCCCCchHHhCHHHHHHHHHHHH
Confidence 9999999999886 679999999999987665555554444444
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.94 E-value=5.3e-27 Score=182.36 Aligned_cols=187 Identities=15% Similarity=0.069 Sum_probs=131.8
Q ss_pred cCCCCCceEEeCCC--CCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCC-CcccCCCCcccccccCCCCCC
Q 025121 17 RTFEFGRTHVVRPK--GKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTR-PVAILGGFPCTAWFDVGELSD 93 (257)
Q Consensus 17 ~~~~~~~~~~~~~~--~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~-g~~~~~g~~~~~w~~~~~~~~ 93 (257)
.+..+..+...+.. .+++++||++||++++...|..+++.|+.+||+|+++|+||| |.+....
T Consensus 13 dg~~l~~w~~~p~~~~~~~~~~Vvi~HG~~~~~~~~~~~a~~L~~~G~~Vi~~D~rGh~G~S~g~~-------------- 78 (302)
T d1thta_ 13 NGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSI-------------- 78 (302)
T ss_dssp TTEEEEEEEECCCTTSCCCSCEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEECCCBCC---------------------
T ss_pred CCCEEEEEEecCcCCCCCCCCEEEEeCCCcchHHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcc--------------
Confidence 34444444444333 345689999999999999999999999999999999999987 5432110
Q ss_pred CCCCchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh
Q 025121 94 DGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR 173 (257)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 173 (257)
..........++..+.++++..... +++|+||||||.+++.+|. +.+++++|+.+|.........
T Consensus 79 -~~~~~~~~~~dl~~vi~~l~~~~~~-~i~lvG~SmGG~ial~~A~-------------~~~v~~li~~~g~~~~~~~~~ 143 (302)
T d1thta_ 79 -DEFTMTTGKNSLCTVYHWLQTKGTQ-NIGLIAASLSARVAYEVIS-------------DLELSFLITAVGVVNLRDTLE 143 (302)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHTTCC-CEEEEEETHHHHHHHHHTT-------------TSCCSEEEEESCCSCHHHHHH
T ss_pred -cCCCHHHHHHHHHHHHHhhhccCCc-eeEEEEEchHHHHHHHHhc-------------ccccceeEeecccccHHHHHH
Confidence 0112333444556666666654433 9999999999999998886 556888988887643322111
Q ss_pred hccc---------------------------------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHh
Q 025121 174 NKIE---------------------------------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCL 214 (257)
Q Consensus 174 ~~~~---------------------------------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l 214 (257)
..+. .........+++|+++++|++|.+||++.++++++.+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~V~~~~~~~l~~~i 223 (302)
T d1thta_ 144 KALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHI 223 (302)
T ss_dssp HHHSSCGGGSCGGGCCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTC
T ss_pred HHHhhccchhhhhhccccccccccchhhHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhC
Confidence 1000 0012245678999999999999999999999999998
Q ss_pred hhcCceeeEEEEecCCCCccC
Q 025121 215 SISGFRHLTFKSFEGLGHYTV 235 (257)
Q Consensus 215 ~~~~~~~~~~~~~~g~~H~~~ 235 (257)
+.. ++++++++|++|.+.
T Consensus 224 ~s~---~~kl~~~~g~~H~l~ 241 (302)
T d1thta_ 224 RTG---HCKLYSLLGSSHDLG 241 (302)
T ss_dssp TTC---CEEEEEETTCCSCTT
T ss_pred CCC---CceEEEecCCCcccc
Confidence 754 689999999999876
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.94 E-value=2.7e-26 Score=182.41 Aligned_cols=203 Identities=16% Similarity=0.149 Sum_probs=144.2
Q ss_pred CCCCCceEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCC
Q 025121 18 TFEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPE 97 (257)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~ 97 (257)
+..+...+..++...+.|+||++||++++...+..+++.|+++||.|+++|+||+|.+..... .
T Consensus 115 g~~l~g~l~~P~~~~~~P~Vi~~hG~~~~~e~~~~~~~~l~~~G~~vl~~D~~G~G~s~~~~~--------------~-- 178 (360)
T d2jbwa1 115 GIPMPVYVRIPEGPGPHPAVIMLGGLESTKEESFQMENLVLDRGMATATFDGPGQGEMFEYKR--------------I-- 178 (360)
T ss_dssp TEEEEEEEECCSSSCCEEEEEEECCSSCCTTTTHHHHHHHHHTTCEEEEECCTTSGGGTTTCC--------------S--
T ss_pred CcccceEEEecCCCCCceEEEEeCCCCccHHHHHHHHHHHHhcCCEEEEEccccccccCcccc--------------c--
Confidence 344444555555666789999999999999888888898988999999999998875432110 0
Q ss_pred chhhHHHHHHHHHHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhc
Q 025121 98 DWEGLDASAAHIANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNK 175 (257)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 175 (257)
..+.......+.+++... .+.++|+|+|+||||++++.++.. .++++++|+++++..........
T Consensus 179 -~~~~~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~------------~pri~a~V~~~~~~~~~~~~~~~ 245 (360)
T d2jbwa1 179 -AGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC------------EPRLAACISWGGFSDLDYWDLET 245 (360)
T ss_dssp -CSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH------------CTTCCEEEEESCCSCSTTGGGSC
T ss_pred -cccHHHHHHHHHHHHHhcccccccceeehhhhcccHHHHHHhhc------------CCCcceEEEEcccccHHHHhhhh
Confidence 112233344445555443 233589999999999999999985 45799999998865432111000
Q ss_pred ------------cc------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCC
Q 025121 176 ------------IE------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLG 231 (257)
Q Consensus 176 ------------~~------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~ 231 (257)
.. .........+++|+|++||++|+ +|.+.+..+++.++.. +++++++++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-vp~~~~~~l~~~~~~~---~~~l~~~~~g~ 321 (360)
T d2jbwa1 246 PLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAE---HLNLVVEKDGD 321 (360)
T ss_dssp HHHHHHHHHHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGG---GEEEEEETTCC
T ss_pred hhhhHHHHHhccCCchHHHHHHHHhhcchhhhHhhCCCCEEEEEeCCCC-cCHHHHHHHHHhcCCC---CeEEEEECCCC
Confidence 00 00111346788999999999998 6899999999998754 67889999999
Q ss_pred CccC---HHHHHHHHHHHHHhcCcC
Q 025121 232 HYTV---PKEMDEVCNWLTARLGLE 253 (257)
Q Consensus 232 H~~~---~~~~~~~~~~l~~~l~~~ 253 (257)
|... .+....+.+||.+.|...
T Consensus 322 H~~~~~~~~~~~~i~dWl~~~L~~g 346 (360)
T d2jbwa1 322 HCCHNLGIRPRLEMADWLYDVLVAG 346 (360)
T ss_dssp GGGGGGTTHHHHHHHHHHHHHHTSS
T ss_pred cCCCcChHHHHHHHHHHHHHHhccC
Confidence 9544 455678999999998654
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=99.94 E-value=3.2e-26 Score=176.50 Aligned_cols=187 Identities=18% Similarity=0.173 Sum_probs=135.3
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.|+|||+||++++...|..++..|+ .+|+|+++|+||+|.+..... ......++.+.+.++..++
T Consensus 28 gp~vv~lHG~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~s~~~~~--------------~~~~~~~~~~~a~~~~~~~ 92 (293)
T d1ehya_ 28 GPTLLLLHGWPGFWWEWSKVIGPLA-EHYDVIVPDLRGFGDSEKPDL--------------NDLSKYSLDKAADDQAALL 92 (293)
T ss_dssp SSEEEEECCSSCCGGGGHHHHHHHH-TTSEEEEECCTTSTTSCCCCT--------------TCGGGGCHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHh-cCCEEEEecCCcccCCccccc--------------cccccccchhhhhHHHhhh
Confidence 5789999999999999999999996 589999999998875432211 1112344566677777777
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh--------------------
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR-------------------- 173 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-------------------- 173 (257)
++.... +++++||||||.+++.++.+ +|+++.+++++++..+......
T Consensus 93 ~~l~~~-~~~lvGhS~Gg~ia~~~a~~-----------~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (293)
T d1ehya_ 93 DALGIE-KAYVVGHDFAAIVLHKFIRK-----------YSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLDMA 160 (293)
T ss_dssp HHTTCC-CEEEEEETHHHHHHHHHHHH-----------TGGGEEEEEEECCSCTTC-----------CCHHHHHTTCHHH
T ss_pred hhcCcc-ccccccccccccchhccccc-----------CccccceeeeeeccCccccchhhhhhhhhhhhhhhhhccchh
Confidence 765544 89999999999999999995 4899999998876432110000
Q ss_pred ------------h----cc----------------------cc---------------------chHHHhhhcCCCEEEE
Q 025121 174 ------------N----KI----------------------EG---------------------SHEAARRAASLPILLT 194 (257)
Q Consensus 174 ------------~----~~----------------------~~---------------------~~~~~~~~~~~P~l~~ 194 (257)
. .+ .. ........+++|++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii 240 (293)
T d1ehya_ 161 VEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLPVTMI 240 (293)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCSCEEEE
T ss_pred hhhhccchhHHHHHHHHhhhhcccccccccHHHHHhhhhccccchhhhhhhhhhhhccccchhhhhhhhhhccCCceEEE
Confidence 0 00 00 0000123467899999
Q ss_pred ccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 195 HGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 195 ~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
+|++|.++|.+...++.+.+. +++++++++++||+++.|..+.+.+.|.++++
T Consensus 241 ~G~~D~~~~~~~~~~~~~~~~----~~~~~~~i~~~gH~~~~e~Pe~~~~~I~~Ffr 293 (293)
T d1ehya_ 241 WGLGDTCVPYAPLIEFVPKYY----SNYTMETIEDCGHFLMVEKPEIAIDRIKTAFR 293 (293)
T ss_dssp EECCSSCCTTHHHHHHHHHHB----SSEEEEEETTCCSCHHHHCHHHHHHHHHHHCC
T ss_pred EeCCCCCcCHHHHHHHHHHhC----CCCEEEEECCCCCchHHHCHHHHHHHHHHhhC
Confidence 999999999877655544442 17899999999999998888888888888764
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=1.3e-26 Score=175.80 Aligned_cols=187 Identities=22% Similarity=0.159 Sum_probs=130.2
Q ss_pred EeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025121 26 VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 26 ~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
+|+..++.+++|||+||++++...|..+++.|+ .+|+|+++|+||+|.+...+ ..++.+.
T Consensus 3 ~y~~~G~g~~~lvllHG~~~~~~~~~~~~~~L~-~~~~vi~~D~~G~G~S~~~~-------------------~~~~~d~ 62 (256)
T d1m33a_ 3 WWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELS-SHFTLHLVDLPGFGRSRGFG-------------------ALSLADM 62 (256)
T ss_dssp CEEEECCCSSEEEEECCTTCCGGGGGGTHHHHH-TTSEEEEECCTTSTTCCSCC-------------------CCCHHHH
T ss_pred EEEEECCCCCeEEEECCCCCCHHHHHHHHHHHh-CCCEEEEEeCCCCCCccccc-------------------ccccccc
Confidence 344555666789999999999999999999997 68999999999887543211 1122333
Q ss_pred HHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc--hhh-------hhc-
Q 025121 106 AAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--RNL-------RNK- 175 (257)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~-------~~~- 175 (257)
+..+. .... ++++++||||||.+++.++.+. |+.+.+++++++..... ... ...
T Consensus 63 ~~~~~----~~~~-~~~~l~GhS~Gg~ia~~~a~~~-----------p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (256)
T d1m33a_ 63 AEAVL----QQAP-DKAIWLGWSLGGLVASQIALTH-----------PERVRALVTVASSPCFSARDEWPGIKPDVLAGF 126 (256)
T ss_dssp HHHHH----TTSC-SSEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHH
T ss_pred ccccc----cccc-cceeeeecccchHHHHHHHHhC-----------CcccceeeeeecccccccchhhhhhHHHHHHHH
Confidence 33332 2223 3899999999999999999964 88898888776431110 000 000
Q ss_pred ---c-------------------------------------c---------------cchHHHhhhcCCCEEEEccCCCC
Q 025121 176 ---I-------------------------------------E---------------GSHEAARRAASLPILLTHGLCDD 200 (257)
Q Consensus 176 ---~-------------------------------------~---------------~~~~~~~~~~~~P~l~~~G~~D~ 200 (257)
. . .........+++|+++++|++|.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 206 (256)
T d1m33a_ 127 QQQLSDDQQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDG 206 (256)
T ss_dssp HHHHHHHHHHHHHHHHHTTSTTSTTHHHHHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCS
T ss_pred HhhhhhhhHHHHHHHhhhhhccccchhhHHHHHHHhhhhcchhhHHHHHhhhhhhcccchHHHHHhccCCccccccccCC
Confidence 0 0 00001234578999999999999
Q ss_pred cccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcCcC
Q 025121 201 VVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLGLE 253 (257)
Q Consensus 201 ~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~~~ 253 (257)
++|.+.++.+.+.++ +.++++++++||.++.+..+.+.+.|.++++.-
T Consensus 207 ~~p~~~~~~l~~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~i 254 (256)
T d1m33a_ 207 LVPRKVVPMLDKLWP-----HSESYIFAKAAHAPFISHPAEFCHLLVALKQRV 254 (256)
T ss_dssp SSCGGGCC-CTTTCT-----TCEEEEETTCCSCHHHHSHHHHHHHHHHHHTTS
T ss_pred CCCHHHHHHHHHHCC-----CCEEEEECCCCCchHHHCHHHHHHHHHHHHHHc
Confidence 999998888877776 678999999999988777777777777766543
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=99.94 E-value=2e-26 Score=173.89 Aligned_cols=182 Identities=15% Similarity=0.092 Sum_probs=136.0
Q ss_pred EEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhccC
Q 025121 37 IVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTE 116 (257)
Q Consensus 37 vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (257)
.||+||++++...|..++..|+++||+|+++|+||+|.+... .....++.+.++++.+++.+.
T Consensus 5 ~vliHG~~~~~~~w~~~~~~L~~~g~~Via~Dl~G~G~S~~~-----------------~~~~~~~~~~~~~l~~~~~~~ 67 (256)
T d3c70a1 5 FVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQ-----------------IEEIGSFDEYSEPLLTFLEAL 67 (256)
T ss_dssp EEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTTSTTCSCC-----------------GGGCCSHHHHTHHHHHHHHHS
T ss_pred EEEeCCCCCCHHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCC-----------------CCCCCCHHHHHHHhhhhhhhh
Confidence 589999999999999999999878999999999988754321 111234566677777777665
Q ss_pred CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc--------------------
Q 025121 117 PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI-------------------- 176 (257)
Q Consensus 117 ~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-------------------- 176 (257)
...++++|+||||||.+++.++.+. |+++++++++++..+.........
T Consensus 68 ~~~~~~~lvGhS~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (256)
T d3c70a1 68 PPGEKVILVGESCGGLNIAIAADKY-----------CEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYT 136 (256)
T ss_dssp CTTCCEEEEEETTHHHHHHHHHHHH-----------GGGEEEEEEESCCCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEE
T ss_pred ccccceeecccchHHHHHHHHhhcC-----------chhhhhhheeccccCCcccchhhHhhhhhhhhhhhhhhHHHhhh
Confidence 5455999999999999999999964 889999998876543221000000
Q ss_pred --------------------c---------------------------cchHHHhhhcCCCEEEEccCCCCcccchhhHH
Q 025121 177 --------------------E---------------------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEK 209 (257)
Q Consensus 177 --------------------~---------------------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~ 209 (257)
. ..........++|+++++|++|..+|.+..+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~ 216 (256)
T d3c70a1 137 KDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLW 216 (256)
T ss_dssp ETTEEEEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHTTSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHH
T ss_pred ccccccchhhhhhhhhhhhhhhhcchhhHHHhhhhhhhhhHHHhhhhhcchhhhhhccccceeEEeecCCCCCCHHHHHH
Confidence 0 00000223357899999999999999998888
Q ss_pred HHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 210 SANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 210 ~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
+.+.++ +.++++++++||..+.+.++++.+.|.+++.
T Consensus 217 ~~~~~p-----~~~~~~i~~agH~~~~e~P~~~~~~l~~~~~ 253 (256)
T d3c70a1 217 QIENYK-----PDKVYKVEGGDHKLQLTKTKEIAEILQEVAD 253 (256)
T ss_dssp HHHHSC-----CSEEEECCSCCSCHHHHSHHHHHHHHHHHHH
T ss_pred HHHHCC-----CCEEEEECCCCCchHHhCHHHHHHHHHHHHH
Confidence 888876 6789999999999998777777777776543
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.94 E-value=5e-26 Score=166.99 Aligned_cols=192 Identities=20% Similarity=0.240 Sum_probs=144.9
Q ss_pred EEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025121 25 HVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 25 ~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
...++..++.|+||++||+|++...|..+++.+. .++.++.++.+.++.+. ..|+.. .........++..
T Consensus 8 ~~~~~~~~~~P~vi~lHG~G~~~~~~~~~~~~l~-~~~~v~~~~~~~~~~~~------~~~~~~---~~~~~~~~~~~~~ 77 (203)
T d2r8ba1 8 HKSRAGVAGAPLFVLLHGTGGDENQFFDFGARLL-PQATILSPVGDVSEHGA------ARFFRR---TGEGVYDMVDLER 77 (203)
T ss_dssp EEEECCCTTSCEEEEECCTTCCHHHHHHHHHHHS-TTSEEEEECCSEEETTE------EESSCB---CGGGCBCHHHHHH
T ss_pred eecCCCCCCCCEEEEECCCCCCHHHHHHHHHHhc-cCCeEEEeccccccccc------cccccc---cCccccchhHHHH
Confidence 3455677788999999999999999999998886 67888888866432111 111111 1112233455555
Q ss_pred HHHHHHHHhcc---CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchH
Q 025121 105 SAAHIANLLST---EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHE 181 (257)
Q Consensus 105 ~~~~~~~~~~~---~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 181 (257)
.+..+..+++. .....+++++|+|+||.+++.++.+. +..+.+++++++.++.......
T Consensus 78 ~~~~~~~~l~~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~-----------p~~~~~~~~~~~~~~~~~~~~~------- 139 (203)
T d2r8ba1 78 ATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQ-----------PELFDAAVLMHPLIPFEPKISP------- 139 (203)
T ss_dssp HHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHS-----------TTTCSEEEEESCCCCSCCCCCC-------
T ss_pred HHHHHHHHHHHhhhcCCCceEEEEEecCHHHHHHHHHHhh-----------hhcccceeeecccccccccccc-------
Confidence 56665555532 22335999999999999999999964 8889999999998765433221
Q ss_pred HHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHh
Q 025121 182 AARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTAR 249 (257)
Q Consensus 182 ~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~ 249 (257)
.....|++++||++|.+||++.++++.+.+++.|+ +++++++++ ||.+..+.++.+.+||.+.
T Consensus 140 ---~~~~~~~~i~hG~~D~~vp~~~~~~~~~~L~~~g~-~v~~~~~~g-gH~~~~~~~~~~~~wl~~~ 202 (203)
T d2r8ba1 140 ---AKPTRRVLITAGERDPICPVQLTKALEESLKAQGG-TVETVWHPG-GHEIRSGEIDAVRGFLAAY 202 (203)
T ss_dssp ---CCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSS-EEEEEEESS-CSSCCHHHHHHHHHHHGGG
T ss_pred ---ccccchhhccccCCCCcccHHHHHHHHHHHHHCCC-CEEEEEECC-CCcCCHHHHHHHHHHHHhc
Confidence 24578999999999999999999999999999998 899999997 8999999999999999763
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=99.94 E-value=4.7e-26 Score=171.57 Aligned_cols=183 Identities=18% Similarity=0.158 Sum_probs=136.4
Q ss_pred eEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhc
Q 025121 35 ATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLS 114 (257)
Q Consensus 35 ~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (257)
+.|||+||++++...|..+++.|+++||+|+++|+||+|.+.... ....++.+...++..++.
T Consensus 3 ~~vvllHG~~~~~~~w~~~~~~L~~~g~~vi~~Dl~G~G~S~~~~-----------------~~~~~~~~~~~~~~~~~~ 65 (258)
T d1xkla_ 3 KHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKI-----------------EELRTLYDYTLPLMELME 65 (258)
T ss_dssp CEEEEECCTTCCGGGGTTHHHHHHHTTCEEEECCCTTSTTCCCCG-----------------GGCCSHHHHHHHHHHHHH
T ss_pred CcEEEECCCCCCHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCC-----------------CCCcchHHHHHHHhhhhh
Confidence 589999999999999999999998789999999999887543211 112345566666777776
Q ss_pred cCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhc-------------------
Q 025121 115 TEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNK------------------- 175 (257)
Q Consensus 115 ~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~------------------- 175 (257)
......++.++||||||.+++.++.+. |.++.+++++++..+........
T Consensus 66 ~~~~~~~~~lvghS~Gg~va~~~a~~~-----------p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (258)
T d1xkla_ 66 SLSADEKVILVGHSLGGMNLGLAMEKY-----------PQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQF 134 (258)
T ss_dssp TSCSSSCEEEEEETTHHHHHHHHHHHC-----------GGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEE
T ss_pred cccccccccccccchhHHHHHHHhhhh-----------ccccceEEEecccCCCcccchHHHHHHHhhhhhhhhhhhhhh
Confidence 665556899999999999999999964 88999999887654322100000
Q ss_pred -----------------------c-cc--------------------------chHHHhhhcCCCEEEEccCCCCcccch
Q 025121 176 -----------------------I-EG--------------------------SHEAARRAASLPILLTHGLCDDVVPYK 205 (257)
Q Consensus 176 -----------------------~-~~--------------------------~~~~~~~~~~~P~l~~~G~~D~~v~~~ 205 (257)
. .. ........+.+|+++++|++|.++|.+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~ 214 (258)
T d1xkla_ 135 LPYGSPEEPLTSMFFGPKFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEE 214 (258)
T ss_dssp EECSCTTSCCEEEECCHHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHH
T ss_pred hhhhhhhhhcccccccHHHHHHHhhhcccHHHHHHhhhhhhhhhhhhhhhhhhhhcccccccccceeEeeecCCCCCCHH
Confidence 0 00 000022345789999999999999999
Q ss_pred hhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 206 YGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 206 ~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
..+.+.+.++ ++++++++++||..+.+.++.+.+.|.+++
T Consensus 215 ~~~~~~~~~~-----~~~~~~i~~~gH~~~~e~P~~~~~~l~e~~ 254 (258)
T d1xkla_ 215 FQRWQIDNIG-----VTEAIEIKGADHMAMLCEPQKLCASLLEIA 254 (258)
T ss_dssp HHHHHHHHHC-----CSEEEEETTCCSCHHHHSHHHHHHHHHHHH
T ss_pred HHHHHHHHCC-----CCEEEEECCCCCchHHhCHHHHHHHHHHHH
Confidence 9999998886 678999999999998777777666666654
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.94 E-value=1e-25 Score=165.94 Aligned_cols=195 Identities=15% Similarity=0.135 Sum_probs=140.0
Q ss_pred CCCCCceEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCC
Q 025121 18 TFEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPE 97 (257)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~ 97 (257)
++.++.... .+.++.+|+||++||+|++...|..+++.|. .++.+++++.+.. ..+...|+..... ...
T Consensus 8 ~~~~~~~~~-~~~~~~~p~vv~lHG~g~~~~~~~~l~~~l~-~~~~~l~~~~~~~------~~~~~~~~~~~~~---~~~ 76 (209)
T d3b5ea1 8 DLAFPYRLL-GAGKESRECLFLLHGSGVDETTLVPLARRIA-PTATLVAARGRIP------QEDGFRWFERIDP---TRF 76 (209)
T ss_dssp SSSSCEEEE-STTSSCCCEEEEECCTTBCTTTTHHHHHHHC-TTSEEEEECCSEE------ETTEEESSCEEET---TEE
T ss_pred CCcceeEec-CCCCCCCCEEEEEcCCCCCHHHHHHHHHHhc-cCcEEEeeccCcC------cccCccccccCCc---ccc
Confidence 444544443 4566778999999999999999999999997 5788888875421 0111223322111 111
Q ss_pred chhhHHHHHHHHH----HHhcc-CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhh
Q 025121 98 DWEGLDASAAHIA----NLLST-EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL 172 (257)
Q Consensus 98 ~~~~~~~~~~~~~----~~~~~-~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 172 (257)
........+..+. .+.++ ..+.++++++|||+||.+++.++.+. |+.++++++++|..+.....
T Consensus 77 ~~~~~~~~~~~l~~~l~~~~~~~~id~~ri~l~G~S~Gg~~a~~~a~~~-----------p~~~~~~v~~~g~~~~~~~~ 145 (209)
T d3b5ea1 77 EQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLH-----------PGIVRLAALLRPMPVLDHVP 145 (209)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHS-----------TTSCSEEEEESCCCCCSSCC
T ss_pred chhhHHHHHHHHHHHHHHHHHHhCcccCCEEEEeeCChHHHHHHHHHhC-----------CCcceEEEEeCCcccccccc
Confidence 2233333333333 33333 23446999999999999999999954 88999999999876543221
Q ss_pred hhccccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHH
Q 025121 173 RNKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLT 247 (257)
Q Consensus 173 ~~~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~ 247 (257)
. ....++|+++++|++|++++ +.+.++.+.+++.|. ++++++++| ||.+.++..+.+.+||.
T Consensus 146 ~----------~~~~~~p~~~~~G~~D~~~~-~~~~~~~~~l~~~G~-~v~~~~~~g-gH~i~~~~~~~~~~wl~ 207 (209)
T d3b5ea1 146 A----------TDLAGIRTLIIAGAADETYG-PFVPALVTLLSRHGA-EVDARIIPS-GHDIGDPDAAIVRQWLA 207 (209)
T ss_dssp C----------CCCTTCEEEEEEETTCTTTG-GGHHHHHHHHHHTTC-EEEEEEESC-CSCCCHHHHHHHHHHHH
T ss_pred c----------cccccchheeeeccCCCccC-HHHHHHHHHHHHCCC-CeEEEEECC-CCCCCHHHHHHHHHHhC
Confidence 1 13357899999999999998 567889999999888 899999997 89999999999999985
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.94 E-value=2e-25 Score=170.48 Aligned_cols=189 Identities=22% Similarity=0.257 Sum_probs=127.3
Q ss_pred eEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHH
Q 025121 24 THVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLD 103 (257)
Q Consensus 24 ~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 103 (257)
.+.|...++. ++|||+||++++...|..+++.|..+||+|+++|+||+|.+.... ...+..
T Consensus 10 ~l~y~~~G~g-~~ivlvHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~------------------~~~~~~ 70 (274)
T d1a8qa_ 10 EIFYKDWGQG-RPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVW------------------DGYDFD 70 (274)
T ss_dssp EEEEEEECSS-SEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS------------------SCCSHH
T ss_pred EEEEEEECCC-CeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCCccccccc------------------ccccch
Confidence 3444444443 578999999999999999999887789999999999887543221 112334
Q ss_pred HHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhh-----------
Q 025121 104 ASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL----------- 172 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----------- 172 (257)
+.+.++..+++..... +++++||||||.+++.++.+. .++++++++++++..+.....
T Consensus 71 ~~~~dl~~~l~~l~~~-~~~lvGhS~Gg~~~~~~~a~~----------~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (274)
T d1a8qa_ 71 TFADDLNDLLTDLDLR-DVTLVAHSMGGGELARYVGRH----------GTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEV 139 (274)
T ss_dssp HHHHHHHHHHHHTTCC-SEEEEEETTHHHHHHHHHHHH----------CSTTEEEEEEESCCCSCCBCCSSCTTSBCHHH
T ss_pred hhHHHHHHHHHHhhhh-hhcccccccccchHHHHHHHh----------hhccceeEEEEeccCccchhhhhccchhhHHH
Confidence 4556666666665444 899999999999999877653 377899988887532211000
Q ss_pred ----hh----------------cc----------------------c---------------cchHHHhhhcCCCEEEEc
Q 025121 173 ----RN----------------KI----------------------E---------------GSHEAARRAASLPILLTH 195 (257)
Q Consensus 173 ----~~----------------~~----------------------~---------------~~~~~~~~~~~~P~l~~~ 195 (257)
.. .. . .........+++|+++++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~ 219 (274)
T d1a8qa_ 140 FDALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVH 219 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEE
T ss_pred HHHHHhhhhhhhHHHhhhhhhhhhhccccchhhhhhHHHHHHHhhhccchhhhhhHHHHhhccchHHHHHhccceeeeec
Confidence 00 00 0 000012345789999999
Q ss_pred cCCCCcccchhh-HHHHHHhhhcCceeeEEEEecCCCCccC--HHHH----HHHHHHHH
Q 025121 196 GLCDDVVPYKYG-EKSANCLSISGFRHLTFKSFEGLGHYTV--PKEM----DEVCNWLT 247 (257)
Q Consensus 196 G~~D~~v~~~~~-~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~----~~~~~~l~ 247 (257)
|++|.+++.+.. +.+.+.++ ++++++++++||... .+.. +.+.+||+
T Consensus 220 G~~D~~~~~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~~~~~p~~~~~~i~~FL~ 273 (274)
T d1a8qa_ 220 GDDDQVVPIDATGRKSAQIIP-----NAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp ETTCSSSCGGGTHHHHHHHST-----TCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHT
T ss_pred cCCCCCcCHHHHHHHHHHhCC-----CCEEEEECCCCCcccccccCHHHHHHHHHHHHC
Confidence 999999998765 45555555 679999999999764 2333 44555554
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=2.5e-26 Score=169.03 Aligned_cols=177 Identities=15% Similarity=0.149 Sum_probs=121.7
Q ss_pred CCCCCCceEEEEEccCCCCccchHH--HhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025121 28 RPKGKHQATIVWLHGLGDNGSSWSQ--LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 28 ~~~~~~~~~vi~~HG~~~~~~~~~~--~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
+..++.+++|||+||++++...|.. +++.|+++||+|+++|+||+|.+....... ........+.
T Consensus 25 ~~~~~~~~~vvllHG~~~~~~~w~~~~~~~~la~~gy~via~D~~G~G~S~~~~~~~-------------~~~~~~~~~~ 91 (208)
T d1imja_ 25 PGSGQARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAAAPA-------------PIGELAPGSF 91 (208)
T ss_dssp CSSSCCSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSCCSS-------------CTTSCCCTHH
T ss_pred CCCCCCCCeEEEECCCCCChhHHhhhHHHHHHHHcCCeEEEeecccccCCCCCCccc-------------ccchhhhhhh
Confidence 3455677899999999999999976 457888889999999999887654322100 0001111222
Q ss_pred HHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhh
Q 025121 106 AAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARR 185 (257)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (257)
+..+.+.+. . .+++|+||||||.+++.++.+ +|++++++|++++..... .......
T Consensus 92 l~~~~~~l~---~-~~~~lvG~S~Gg~~a~~~a~~-----------~p~~v~~lV~~~p~~~~~---------~~~~~~~ 147 (208)
T d1imja_ 92 LAAVVDALE---L-GPPVVISPSLSGMYSLPFLTA-----------PGSQLPGFVPVAPICTDK---------INAANYA 147 (208)
T ss_dssp HHHHHHHHT---C-CSCEEEEEGGGHHHHHHHHTS-----------TTCCCSEEEEESCSCGGG---------SCHHHHH
T ss_pred hhhcccccc---c-ccccccccCcHHHHHHHHHHH-----------hhhhcceeeecCcccccc---------ccccccc
Confidence 333333332 2 388999999999999999985 489999999998743211 1223346
Q ss_pred hcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHH----HHHHHHHHHH
Q 025121 186 AASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKE----MDEVCNWLTA 248 (257)
Q Consensus 186 ~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~----~~~~~~~l~~ 248 (257)
.+++|+|+++|++|.++|.+. +..+.++ +.++.+++++||....+. .+.+.+||++
T Consensus 148 ~i~~P~Lii~G~~D~~~~~~~--~~~~~~~-----~~~~~~i~~~gH~~~~~~p~~~~~~l~~Fl~~ 207 (208)
T d1imja_ 148 SVKTPALIVYGDQDPMGQTSF--EHLKQLP-----NHRVLIMKGAGHPCYLDKPEEWHTGLLDFLQG 207 (208)
T ss_dssp TCCSCEEEEEETTCHHHHHHH--HHHTTSS-----SEEEEEETTCCTTHHHHCHHHHHHHHHHHHHT
T ss_pred ccccccccccCCcCcCCcHHH--HHHHhCC-----CCeEEEECCCCCchhhhCHHHHHHHHHHHHhc
Confidence 679999999999999988642 2333332 679999999999865333 3556667654
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=99.93 E-value=1.3e-25 Score=172.59 Aligned_cols=191 Identities=19% Similarity=0.152 Sum_probs=130.0
Q ss_pred EEeCCCCCCceEEEEEccCCCCccchHHHhhcC---CCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhh
Q 025121 25 HVVRPKGKHQATIVWLHGLGDNGSSWSQLLESL---PLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEG 101 (257)
Q Consensus 25 ~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l---~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 101 (257)
+.|...++ .|+|||+||++.+...|..+.+.+ ...||.|+++|+||+|.+.... .....
T Consensus 22 i~y~~~G~-G~~ivllHG~~~~~~~~~~~~~~l~~~~~~g~~v~~~D~~G~G~S~~~~-----------------~~~~~ 83 (283)
T d2rhwa1 22 IHYNEAGN-GETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVV-----------------MDEQR 83 (283)
T ss_dssp EEEEEECC-SSEEEEECCCSTTCCHHHHHTTTHHHHHHTTCEEEEECCTTSTTSCCCC-----------------CSSCH
T ss_pred EEEEEEcC-CCeEEEECCCCCChhHHHHHHHHHHHHHHCCCEEEEEeCCCCccccccc-----------------ccccc
Confidence 33444444 368999999999999988766544 2589999999999887543211 11122
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhh-------
Q 025121 102 LDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN------- 174 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~------- 174 (257)
....++++.+++++...+ +++++||||||.+++.++.+. |+++++++++++..........
T Consensus 84 ~~~~~~~i~~li~~l~~~-~~~lvGhS~Gg~ia~~~a~~~-----------p~~v~~lil~~~~~~~~~~~~~~~~~~~~ 151 (283)
T d2rhwa1 84 GLVNARAVKGLMDALDID-RAHLVGNAMGGATALNFALEY-----------PDRIGKLILMGPGGLGPSMFAPMPMEGIK 151 (283)
T ss_dssp HHHHHHHHHHHHHHHTCC-CEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESCSCCCCCSSSCSSCHHHH
T ss_pred cchhhhhccccccccccc-ccccccccchHHHHHHHHHHh-----------hhhcceEEEeCCCcCCcchhhhhhHHHHH
Confidence 233445555666554433 899999999999999999964 8899999998763211100000
Q ss_pred ----cc------------------------------------------------------ccchHHHhhhcCCCEEEEcc
Q 025121 175 ----KI------------------------------------------------------EGSHEAARRAASLPILLTHG 196 (257)
Q Consensus 175 ----~~------------------------------------------------------~~~~~~~~~~~~~P~l~~~G 196 (257)
.. ..........+++|+++++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G 231 (283)
T d2rhwa1 152 LLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWG 231 (283)
T ss_dssp HHHHHHHSCCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEE
T ss_pred HHHHHhhhhhhhhHHHHHHHhhcccccCcHHHHHHHHHHhhhhhhhhhhhhhhhhhhhccccchHHHHhhCCCCEEEEEe
Confidence 00 00001123456899999999
Q ss_pred CCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 197 LCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 197 ~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
++|.+++.+.++.+.+.++ ++++++++++||.++.+..+.+.+.+.++|
T Consensus 232 ~~D~~~~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~FL 280 (283)
T d2rhwa1 232 RDDRFVPLDHGLKLLWNID-----DARLHVFSKCGHWAQWEHADEFNRLVIDFL 280 (283)
T ss_dssp TTCSSSCTHHHHHHHHHSS-----SEEEEEESSCCSCHHHHTHHHHHHHHHHHH
T ss_pred CCCCCcCHHHHHHHHHhCC-----CCEEEEECCCCCchHHhCHHHHHHHHHHHH
Confidence 9999999999999988886 779999999999987665554444444433
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=99.93 E-value=7.2e-25 Score=171.16 Aligned_cols=192 Identities=18% Similarity=0.095 Sum_probs=136.6
Q ss_pred eEEeCCCC-CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhH
Q 025121 24 THVVRPKG-KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGL 102 (257)
Q Consensus 24 ~~~~~~~~-~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 102 (257)
.+.|...+ +..++|||+||+.++...|......+ ..+|+|+++|+||+|.+.... .....++
T Consensus 23 ~i~y~~~G~~~g~pvvllHG~~g~~~~~~~~~~~l-~~~~~Vi~~D~rG~G~S~~~~----------------~~~~~~~ 85 (313)
T d1azwa_ 23 TLYFEQCGNPHGKPVVMLHGGPGGGCNDKMRRFHD-PAKYRIVLFDQRGSGRSTPHA----------------DLVDNTT 85 (313)
T ss_dssp EEEEEEEECTTSEEEEEECSTTTTCCCGGGGGGSC-TTTEEEEEECCTTSTTSBSTT----------------CCTTCCH
T ss_pred EEEEEEecCCCCCEEEEECCCCCCccchHHHhHHh-hcCCEEEEEeccccCCCCccc----------------cccchhH
Confidence 44555443 34578999999998888888765555 479999999999887554221 1112345
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhh--------
Q 025121 103 DASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN-------- 174 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-------- 174 (257)
.+.++++..++++.... +++|+||||||.+++.++.+. |+++.++++++++.........
T Consensus 86 ~~~~~dl~~~~~~l~~~-~~~lvGhS~Gg~ia~~~a~~~-----------p~~v~~lv~~~~~~~~~~~~~~~~~~~~~~ 153 (313)
T d1azwa_ 86 WDLVADIERLRTHLGVD-RWQVFGGSWGSTLALAYAQTH-----------PQQVTELVLRGIFLLRRFELEWFYQEGASR 153 (313)
T ss_dssp HHHHHHHHHHHHHTTCS-SEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESCCCCCHHHHHHHHTSSHHH
T ss_pred HHHHHHHHHHHHhhccc-cceeEEecCCcHHHHHHHHHh-----------hhceeeeeEeccccccccchhhhhhcccch
Confidence 56667777777776554 899999999999999999964 8999999988765322100000
Q ss_pred -----------cc-----------------------------------------ccc-----------------------
Q 025121 175 -----------KI-----------------------------------------EGS----------------------- 179 (257)
Q Consensus 175 -----------~~-----------------------------------------~~~----------------------- 179 (257)
.. ...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (313)
T d1azwa_ 154 LFPDAWEHYLNAIPPVERADLMSAFHRRLTSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHY 233 (313)
T ss_dssp HCHHHHHHHHHTSCGGGTTSHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHhhhhhhhhhhhhhhhhhhcCccHHHHHHHHHhhhhccccccccccchhhhcccchhHHHHHHhHHHHHH
Confidence 00 000
Q ss_pred -------------hHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC-HHHHHHHHHH
Q 025121 180 -------------HEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-PKEMDEVCNW 245 (257)
Q Consensus 180 -------------~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~~ 245 (257)
.......+++|+++++|++|.++|++.+..+.+.++ +.++++++++||... ++..+++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~l~~~~p-----~a~~~~i~~aGH~~~ep~~~~~li~a 308 (313)
T d1azwa_ 234 FVNGGFFEVEDQLLRDAHRIADIPGVIVHGRYDVVCPLQSAWDLHKAWP-----KAQLQISPASGHSAFEPENVDALVRA 308 (313)
T ss_dssp HHTGGGCSSTTHHHHTGGGGTTCCEEEEEETTCSSSCHHHHHHHHHHCT-----TSEEEEETTCCSSTTSHHHHHHHHHH
T ss_pred HhhccccccchhhhHhhhhcCCCCEEEEEECCCCCCCHHHHHHHHHHCC-----CCEEEEECCCCCCCCCchHHHHHHHH
Confidence 000123467899999999999999999999999987 668999999999876 5667777777
Q ss_pred HHHh
Q 025121 246 LTAR 249 (257)
Q Consensus 246 l~~~ 249 (257)
+.++
T Consensus 309 ~~~f 312 (313)
T d1azwa_ 309 TDGF 312 (313)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7654
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.93 E-value=4.5e-25 Score=162.09 Aligned_cols=176 Identities=14% Similarity=0.102 Sum_probs=125.8
Q ss_pred CceEEEEEccC---CCCccc--hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025121 33 HQATIVWLHGL---GDNGSS--WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 33 ~~~~vi~~HG~---~~~~~~--~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
+.+++|++|+. |++..+ +..+++.|++.||.|+.+|+||+|.+. |. ........+++.
T Consensus 34 ~~~~~vl~Hph~~~GG~~~~~~~~~la~~l~~~G~~vlrfd~RG~G~S~--g~---------------~~~~~~~~~D~~ 96 (218)
T d2fuka1 34 QPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSA--GS---------------FDHGDGEQDDLR 96 (218)
T ss_dssp CSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCC--SC---------------CCTTTHHHHHHH
T ss_pred CCcEEEEECCCCCCCcCCCChHHHHHHHHHHHcCCeEEEeecCCCccCC--Cc---------------cCcCcchHHHHH
Confidence 44677899954 444443 556888899999999999998765432 21 001122233444
Q ss_pred HHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhhhc
Q 025121 108 HIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAA 187 (257)
Q Consensus 108 ~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (257)
.+.+++.+.....+++++|+||||.+++.++.+ ..++++|+++++....+. .....
T Consensus 97 a~~~~~~~~~~~~~v~l~G~S~Gg~va~~~a~~-------------~~~~~lil~ap~~~~~~~-----------~~~~~ 152 (218)
T d2fuka1 97 AVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAA-------------LEPQVLISIAPPAGRWDF-----------SDVQP 152 (218)
T ss_dssp HHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHH-------------HCCSEEEEESCCBTTBCC-----------TTCCC
T ss_pred HHHHHHhhcccCceEEEEEEcccchhhhhhhcc-------------cccceEEEeCCcccchhh-----------hcccc
Confidence 444555544444599999999999999999883 457889999876432221 11245
Q ss_pred CCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC---HHHHHHHHHHHHHhcCcC
Q 025121 188 SLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV---PKEMDEVCNWLTARLGLE 253 (257)
Q Consensus 188 ~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~---~~~~~~~~~~l~~~l~~~ 253 (257)
.+|+|++||++|+++|++.++++++.+.. +.+++++||++|++. .+..+.+.+|++++|...
T Consensus 153 ~~P~Lvi~G~~D~~vp~~~~~~l~~~~~~----~~~l~~i~ga~H~f~~~~~~l~~~~~~~v~~~l~~~ 217 (218)
T d2fuka1 153 PAQWLVIQGDADEIVDPQAVYDWLETLEQ----QPTLVRMPDTSHFFHRKLIDLRGALQHGVRRWLPAT 217 (218)
T ss_dssp CSSEEEEEETTCSSSCHHHHHHHHTTCSS----CCEEEEETTCCTTCTTCHHHHHHHHHHHHGGGCSSC
T ss_pred ccceeeEecCCCcCcCHHHHHHHHHHccC----CceEEEeCCCCCCCCCCHHHHHHHHHHHHHHhcCCC
Confidence 78999999999999999998888776653 568999999999886 344577889999988754
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.93 E-value=6.6e-26 Score=174.69 Aligned_cols=184 Identities=13% Similarity=0.101 Sum_probs=134.1
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
+..|+|||+||++++...|..+++.|+ .+|+|+++|+||+|.+.... ...+..+.++++..
T Consensus 27 ~~~p~lvllHG~~~~~~~~~~~~~~L~-~~~~vi~~d~~G~G~S~~~~------------------~~~~~~~~~~~l~~ 87 (291)
T d1bn7a_ 27 RDGTPVLFLHGNPTSSYLWRNIIPHVA-PSHRCIAPDLIGMGKSDKPD------------------LDYFFDDHVRYLDA 87 (291)
T ss_dssp SSSSCEEEECCTTCCGGGGTTTHHHHT-TTSCEEEECCTTSTTSCCCS------------------CCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHh-cCCEEEEEeCCCCccccccc------------------cccchhHHHHHHhh
Confidence 345789999999999999999999996 69999999999886543211 12234555666666
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc--hhhh----------------
Q 025121 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--RNLR---------------- 173 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~---------------- 173 (257)
++++.... +++|+||||||.+++.++.+. |+++++++++++..... ....
T Consensus 88 ~l~~l~~~-~~~lvGhS~Gg~ia~~~a~~~-----------p~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (291)
T d1bn7a_ 88 FIEALGLE-EVVLVIHDWGSALGFHWAKRN-----------PERVKGIACMEFIRPIPTWDEWPEFARETFQAFRTADVG 155 (291)
T ss_dssp HHHHTTCC-SEEEEEEHHHHHHHHHHHHHC-----------GGGEEEEEEEEECCCBCSGGGSCHHHHHHHHHHTSTTHH
T ss_pred hhhhhccc-cccccccccccchhHHHHHhC-----------CcceeeeeeeccccCCccchhhhhhhhhHHHHHhhhhhH
Confidence 66665444 899999999999999999954 88999988875432110 0000
Q ss_pred --------------------------------hcccc----------------------------chHHHhhhcCCCEEE
Q 025121 174 --------------------------------NKIEG----------------------------SHEAARRAASLPILL 193 (257)
Q Consensus 174 --------------------------------~~~~~----------------------------~~~~~~~~~~~P~l~ 193 (257)
..... ........+++|+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~li 235 (291)
T d1bn7a_ 156 RELIIDQNAFIEGVLPKCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNEIPIAGEPANIVALVEAYMNWLHQSPVPKLL 235 (291)
T ss_dssp HHHHTTSCHHHHTHHHHTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSCEEE
T ss_pred HHhhhhhhhhHHhhhhhhccccchHHHHHHHHHHhcchhhhHHHHHHHHHhhhhhhhchhhhhhhhhhhhhhcCCCCEEE
Confidence 00000 000123567899999
Q ss_pred EccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 194 THGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 194 ~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
++|++|.++|.+.++.+.+.++ ++++++++++||+++.+..+.+.+.+.++|+
T Consensus 236 i~G~~D~~~~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~e~p~~v~~~i~~fL~ 288 (291)
T d1bn7a_ 236 FWGTPGVLIPPAEAARLAESLP-----NCKTVDIGPGLHYLQEDNPDLIGSEIARWLP 288 (291)
T ss_dssp EEEEECSSSCHHHHHHHHHHST-----TEEEEEEEEESSCGGGTCHHHHHHHHHHHSG
T ss_pred EEeCCCCCcCHHHHHHHHHHCC-----CCEEEEECCCCCchHHhCHHHHHHHHHHHHH
Confidence 9999999999999999999887 6799999999999987766666666666654
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.93 E-value=1.8e-25 Score=170.98 Aligned_cols=190 Identities=21% Similarity=0.203 Sum_probs=127.1
Q ss_pred EEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025121 25 HVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 25 ~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
++|...++ .|+|||+||++++...|..++..|..+||+|+++|+||+|.+.... ...++.+
T Consensus 15 i~y~~~G~-G~~ivllHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~------------------~~~~~~~ 75 (277)
T d1brta_ 15 LYYEDHGT-GQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPT------------------TGYDYDT 75 (277)
T ss_dssp EEEEEECS-SSEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS------------------SCCSHHH
T ss_pred EEEEEEcc-CCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeCCCCCcccccc------------------cccchhh
Confidence 34444444 4579999999999999999999887789999999999876543111 1123455
Q ss_pred HHHHHHHHhccCCCCceEEEEEechhHHH-HHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhc--------
Q 025121 105 SAAHIANLLSTEPADVKVGIGGFSMGAAV-ALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNK-------- 175 (257)
Q Consensus 105 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~-a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-------- 175 (257)
.++++.+++++.... +++|+||||||.+ +..++.+ +|+++++++++++..+........
T Consensus 76 ~~~dl~~~l~~l~~~-~~~lvGhS~G~~~~~~~~a~~-----------~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 143 (277)
T d1brta_ 76 FAADLNTVLETLDLQ-DAVLVGFSTGTGEVARYVSSY-----------GTARIAKVAFLASLEPFLLKTDDNPDGAAPQE 143 (277)
T ss_dssp HHHHHHHHHHHHTCC-SEEEEEEGGGHHHHHHHHHHH-----------CSTTEEEEEEESCCCSCCBCBTTBTTCSBCHH
T ss_pred hhhhhhhhhhccCcc-cccccccccchhhhhHHHHHh-----------hhcccceEEEecCCCcccccchhhhhhhhhhh
Confidence 566666666655444 8999999999754 5555553 488999999887643211000000
Q ss_pred ----------------------------------cc---------------------------cchHHHhhhcCCCEEEE
Q 025121 176 ----------------------------------IE---------------------------GSHEAARRAASLPILLT 194 (257)
Q Consensus 176 ----------------------------------~~---------------------------~~~~~~~~~~~~P~l~~ 194 (257)
.. .........+++|++++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii 223 (277)
T d1brta_ 144 FFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALIL 223 (277)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEE
T ss_pred HHHHHHHhhhccchhhhhhccccccccchhhhhhhhHHHhhhhhcccchhhhhhhhhhhhhhhhhHHHHHHhcCccceeE
Confidence 00 00001234568999999
Q ss_pred ccCCCCcccchhh-HHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 195 HGLCDDVVPYKYG-EKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 195 ~G~~D~~v~~~~~-~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
+|++|.+++.+.. +.+.+.++ +.++++++++||.++.+..+.+.+-|.++|
T Consensus 224 ~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~fL 275 (277)
T d1brta_ 224 HGTGDRTLPIENTARVFHKALP-----SAEYVEVEGAPHGLLWTHAEEVNTALLAFL 275 (277)
T ss_dssp EETTCSSSCGGGTHHHHHHHCT-----TSEEEEETTCCTTHHHHTHHHHHHHHHHHH
T ss_pred eecCCCCcCHHHHHHHHHHhCC-----CCEEEEECCCCCchHHhCHHHHHHHHHHHH
Confidence 9999999998765 44555555 679999999999988665555444444443
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.93 E-value=1.3e-25 Score=172.58 Aligned_cols=184 Identities=16% Similarity=0.156 Sum_probs=127.5
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
..+|+||++||++++...|...+..+...||+|+++|+||+|.+.... ....++...++++..
T Consensus 23 ~~~~~iv~lHG~~g~~~~~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~-----------------~~~~~~~~~~~~l~~ 85 (290)
T d1mtza_ 23 EEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPD-----------------QSKFTIDYGVEEAEA 85 (290)
T ss_dssp SCSEEEEEECCTTTCCSGGGGGGGGGGGGTEEEEEECCTTSTTSCCCC-----------------GGGCSHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCchHHHHHHHHHHHHCCCEEEEEeCCCCccccccc-----------------cccccccchhhhhhh
Confidence 456899999999888888887777777789999999999887543211 112234555566666
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhh-----------------
Q 025121 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN----------------- 174 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----------------- 174 (257)
++++....++++|+||||||.+++.++.+. |+++++++++++..+.......
T Consensus 86 ll~~l~~~~~~~lvGhS~Gg~ia~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (290)
T d1mtza_ 86 LRSKLFGNEKVFLMGSSYGGALALAYAVKY-----------QDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIK 154 (290)
T ss_dssp HHHHHHTTCCEEEEEETHHHHHHHHHHHHH-----------GGGEEEEEEESCCSBHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred hhcccccccccceecccccchhhhhhhhcC-----------hhhheeeeecccccCcccchhhhhhhhhhhhHHHHHHHH
Confidence 665542234999999999999999999964 8999999988764321100000
Q ss_pred ---------------c--------c---------------------------------------ccchHHHhhhcCCCEE
Q 025121 175 ---------------K--------I---------------------------------------EGSHEAARRAASLPIL 192 (257)
Q Consensus 175 ---------------~--------~---------------------------------------~~~~~~~~~~~~~P~l 192 (257)
. . ..........+++|++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l 234 (290)
T d1mtza_ 155 KYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPTL 234 (290)
T ss_dssp HHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCSCEE
T ss_pred HhhhhccccchhHHHHHHHHhhhhhcccccchHHHHHHHHHHhhhhhhhhhcchhHHhHhhhhhcccHHHHhhcccceEE
Confidence 0 0 0000012345689999
Q ss_pred EEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHH----HHHHHHHh
Q 025121 193 LTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDE----VCNWLTAR 249 (257)
Q Consensus 193 ~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~----~~~~l~~~ 249 (257)
+++|++|.++| +.++.+.+.++ ++++++++++||.++.+..+. +.+||.+.
T Consensus 235 ~i~G~~D~~~~-~~~~~~~~~~~-----~~~~~~~~~~gH~~~~e~p~~~~~~i~~FL~~h 289 (290)
T d1mtza_ 235 ITVGEYDEVTP-NVARVIHEKIA-----GSELHVFRDCSHLTMWEDREGYNKLLSDFILKH 289 (290)
T ss_dssp EEEETTCSSCH-HHHHHHHHHST-----TCEEEEETTCCSCHHHHSHHHHHHHHHHHHHTC
T ss_pred EEEeCCCCCCH-HHHHHHHHHCC-----CCEEEEECCCCCchHHhCHHHHHHHHHHHHHHh
Confidence 99999999876 56777888776 678999999999987554444 55555543
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=99.93 E-value=2.1e-25 Score=170.82 Aligned_cols=190 Identities=24% Similarity=0.248 Sum_probs=127.7
Q ss_pred EEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025121 25 HVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 25 ~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
++|...++ .|+|||+||++++...|..+++.|...+|+|+++|+||+|.+.... ...++.+
T Consensus 15 i~y~~~G~-g~~illlHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~------------------~~~~~~~ 75 (279)
T d1hkha_ 15 LYYEDQGS-GQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVN------------------TGYDYDT 75 (279)
T ss_dssp EEEEEESS-SEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCCCS------------------SCCSHHH
T ss_pred EEEEEEcc-CCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEechhhCCccccc------------------cccchhh
Confidence 34444444 4789999999999999999998886689999999999887543211 1224455
Q ss_pred HHHHHHHHhccCCCCceEEEEEechhHH-HHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhc--------
Q 025121 105 SAAHIANLLSTEPADVKVGIGGFSMGAA-VALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNK-------- 175 (257)
Q Consensus 105 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~-~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-------- 175 (257)
.++++.++++..... +++|+||||||. ++..++.+ +|+++.+++++++..+........
T Consensus 76 ~~~di~~~i~~l~~~-~~~lvGhS~Gg~~~a~~~a~~-----------~p~~v~~lvli~~~~~~~~~~~~~~~~~~~~~ 143 (279)
T d1hkha_ 76 FAADLHTVLETLDLR-DVVLVGFSMGTGELARYVARY-----------GHERVAKLAFLASLEPFLVQRDDNPEGVPQEV 143 (279)
T ss_dssp HHHHHHHHHHHHTCC-SEEEEEETHHHHHHHHHHHHH-----------CSTTEEEEEEESCCCSBCBCBTTBTTSBCHHH
T ss_pred hhhhhhhhhhhcCcC-ccccccccccccchhhhhccc-----------cccccceeEEeeccCCccccchhhhhhhhHHH
Confidence 566666666654433 899999999974 55555553 388899999887643211000000
Q ss_pred ---------------------------------c----------------------------cc--chHHHhhhcCCCEE
Q 025121 176 ---------------------------------I----------------------------EG--SHEAARRAASLPIL 192 (257)
Q Consensus 176 ---------------------------------~----------------------------~~--~~~~~~~~~~~P~l 192 (257)
. .. ........+++|++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 223 (279)
T d1hkha_ 144 FDGIEAAAKGDRFAWFTDFYKNFYNLDENLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTL 223 (279)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHTHHHHBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEE
T ss_pred HHHHHHhhhhhhhhhhhhhhhhhcccchhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhhhcccccchhhhcccCCceE
Confidence 0 00 00012244689999
Q ss_pred EEccCCCCcccchh-hHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 193 LTHGLCDDVVPYKY-GEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 193 ~~~G~~D~~v~~~~-~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
+++|++|.+++.+. .+.+.+.++ ++++++++++||.++.+..+.+.+-|.++|
T Consensus 224 ~i~G~~D~~~~~~~~~~~~~~~~p-----~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl 277 (279)
T d1hkha_ 224 ILHGTKDNILPIDATARRFHQAVP-----EADYVEVEGAPHGLLWTHADEVNAALKTFL 277 (279)
T ss_dssp EEEETTCSSSCTTTTHHHHHHHCT-----TSEEEEETTCCTTHHHHTHHHHHHHHHHHH
T ss_pred EEEcCCCCccCHHHHHHHHHHhCC-----CCEEEEECCCCCchHHhCHHHHHHHHHHHH
Confidence 99999999998764 466666665 668999999999988666555555555444
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.93 E-value=7.4e-25 Score=166.70 Aligned_cols=193 Identities=19% Similarity=0.146 Sum_probs=130.0
Q ss_pred EEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025121 25 HVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 25 ~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
+.|...++. |+|||+||++++...|..+++.|..+||+|+++|+||+|.+.... ...++..
T Consensus 11 l~y~~~G~g-~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~------------------~~~~~~~ 71 (271)
T d1va4a_ 11 IYFKDWGSG-KPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPW------------------TGNDYDT 71 (271)
T ss_dssp EEEEEESSS-SEEEEECCTTCCGGGGHHHHHHHHTTTCEEEEECCTTSTTSCCCS------------------SCCSHHH
T ss_pred EEEEEEcCC-CeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeccccccccccc------------------ccccccc
Confidence 344444443 568899999999999999999998789999999999887543211 1123344
Q ss_pred HHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc--------
Q 025121 105 SAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI-------- 176 (257)
Q Consensus 105 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-------- 176 (257)
.+.++.++++..... +++++|||+||.+++.++++ .+|+++.+++.+++..+.........
T Consensus 72 ~~~~~~~~~~~~~~~-~~~~vg~s~gG~~~~~~~a~----------~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 140 (271)
T d1va4a_ 72 FADDIAQLIEHLDLK-EVTLVGFSMGGGDVARYIAR----------HGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVF 140 (271)
T ss_dssp HHHHHHHHHHHHTCC-SEEEEEETTHHHHHHHHHHH----------HCSTTEEEEEEESCCCSCCBCBTTBTTSBCHHHH
T ss_pred ccccceeeeeecCCC-cceeeccccccccccccccc----------cccceeeEEEeecccccccccchhhhhhhhhhHH
Confidence 455555555444333 88999999999877665543 24788999988865432110000000
Q ss_pred -----------------------------------------------------------ccchHHHhhhcCCCEEEEccC
Q 025121 177 -----------------------------------------------------------EGSHEAARRAASLPILLTHGL 197 (257)
Q Consensus 177 -----------------------------------------------------------~~~~~~~~~~~~~P~l~~~G~ 197 (257)
..........+++|+++++|+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~g~ 220 (271)
T d1va4a_ 141 ARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGD 220 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEET
T ss_pred HHHHHHhhhhhhhhhhhhcchhhcccchhhhhhhHHHHHHhhhhhhhhhhhhhcccccchhhhhhhhhhcccceeecccC
Confidence 000011334678999999999
Q ss_pred CCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 198 CDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 198 ~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
+|.++|.+...++.+.+.. ++++++++++||.++.+..+.+.+.|.++|+
T Consensus 221 ~D~~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~e~p~~~~~~i~~fL~ 270 (271)
T d1va4a_ 221 GDQIVPFETTGKVAAELIK----GAELKVYKDAPHGFAVTHAQQLNEDLLAFLK 270 (271)
T ss_dssp TCSSSCGGGTHHHHHHHST----TCEEEEETTCCTTHHHHTHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHhCC----CCEEEEECCCCCchHHhCHHHHHHHHHHHHC
Confidence 9999999888777665531 6789999999999886666666666655554
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.93 E-value=5e-25 Score=168.06 Aligned_cols=190 Identities=17% Similarity=0.186 Sum_probs=128.5
Q ss_pred EEeCCCCCCceEEEEEccCCCCccchH---HHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhh
Q 025121 25 HVVRPKGKHQATIVWLHGLGDNGSSWS---QLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEG 101 (257)
Q Consensus 25 ~~~~~~~~~~~~vi~~HG~~~~~~~~~---~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 101 (257)
+.|...++. |+|||+||++.+...|. .++..|+ .+|+|+++|+||+|.+.... .....
T Consensus 15 ~~Y~~~G~G-~pvvllHG~~~~~~~~~~~~~~~~~l~-~~~~vi~~Dl~G~G~S~~~~-----------------~~~~~ 75 (271)
T d1uk8a_ 15 TNYHDVGEG-QPVILIHGSGPGVSAYANWRLTIPALS-KFYRVIAPDMVGFGFTDRPE-----------------NYNYS 75 (271)
T ss_dssp EEEEEECCS-SEEEEECCCSTTCCHHHHHTTTHHHHT-TTSEEEEECCTTSTTSCCCT-----------------TCCCC
T ss_pred EEEEEEeeC-CeEEEECCCCCCccHHHHHHHHHHHHh-CCCEEEEEeCCCCCCccccc-----------------ccccc
Confidence 344444443 57899999988776654 4566665 69999999999887543221 01122
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh--------
Q 025121 102 LDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR-------- 173 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-------- 173 (257)
....+..+..+++....+ +++|+||||||.+++.++.+. |.++.+++++++.........
T Consensus 76 ~~~~~~~~~~~~~~l~~~-~~~lvG~S~Gg~ia~~~a~~~-----------p~~~~~lil~~~~~~~~~~~~~~~~~~~~ 143 (271)
T d1uk8a_ 76 KDSWVDHIIGIMDALEIE-KAHIVGNAFGGGLAIATALRY-----------SERVDRMVLMGAAGTRFDVTEGLNAVWGY 143 (271)
T ss_dssp HHHHHHHHHHHHHHTTCC-SEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESCCCSCCCCCHHHHHHHTC
T ss_pred ccccchhhhhhhhhhcCC-CceEeeccccceeehHHHHhh-----------hccchheeecccCCCcccchhhhhhhhhc
Confidence 344455555555554433 899999999999999999964 889999988766422110000
Q ss_pred --------hc-----------------------------------cc----------cchHHHhhhcCCCEEEEccCCCC
Q 025121 174 --------NK-----------------------------------IE----------GSHEAARRAASLPILLTHGLCDD 200 (257)
Q Consensus 174 --------~~-----------------------------------~~----------~~~~~~~~~~~~P~l~~~G~~D~ 200 (257)
.. .. .........+++|+++++|++|.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~ 223 (271)
T d1uk8a_ 144 TPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQ 223 (271)
T ss_dssp CSCHHHHHHHHHHHCSCGGGCCHHHHHHHHHHHTSTTHHHHHHTTSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCS
T ss_pred cchhHHHHHHHHHHhhhcccchhHHHHHHHhhhhchhHHHHHHhhcchhhhhhhhhccccHHHHHhhccceeEEecCCCC
Confidence 00 00 00111345678999999999999
Q ss_pred cccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 201 VVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 201 ~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
++|.+.++.+.+.++ ++++++++++||.++.+..+.+.+-|.++|
T Consensus 224 ~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~e~p~~~~~~i~~Fl 268 (271)
T d1uk8a_ 224 VVPLSSSLRLGELID-----RAQLHVFGRCGHWTQIEQTDRFNRLVVEFF 268 (271)
T ss_dssp SSCHHHHHHHHHHCT-----TEEEEEESSCCSCHHHHTHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHhCC-----CCEEEEECCCCCchHHHCHHHHHHHHHHHH
Confidence 999999999999887 679999999999987655554444444443
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.93 E-value=1.4e-24 Score=169.58 Aligned_cols=217 Identities=16% Similarity=0.104 Sum_probs=144.4
Q ss_pred CCCCceEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCccc--ccccC-CCCCCCC
Q 025121 19 FEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCT--AWFDV-GELSDDG 95 (257)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~--~w~~~-~~~~~~~ 95 (257)
..+..+++.+....+.|+||++||++++...|...+..|+++||.|+++|.||+|.+........ .|... .......
T Consensus 67 ~~i~~~l~~P~~~~~~P~vv~~HG~~~~~~~~~~~~~~la~~Gy~vi~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~ 146 (318)
T d1l7aa_ 67 ARITGWYAVPDKEGPHPAIVKYHGYNASYDGEIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKD 146 (318)
T ss_dssp EEEEEEEEEESSCSCEEEEEEECCTTCCSGGGHHHHHHHHHTTCEEEEECCTTTSSSCCCCCCSSCCSSSSTTTTTTCTT
T ss_pred cEEEEEEEecCCCCCceEEEEecCCCCCccchHHHHHHHHHCCCEEEEEeeCCCCCCCCCcccchhhhhcchhhchhhhh
Confidence 33444455555567789999999999999999999999988999999999999987654321110 11000 0000011
Q ss_pred CCchhhHHHHHHHHHHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh
Q 025121 96 PEDWEGLDASAAHIANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR 173 (257)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 173 (257)
...............+.+... ....++.++|+|+||..++..+.. ..++.++++..+.........
T Consensus 147 ~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~ 214 (318)
T d1l7aa_ 147 TYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAAL------------SDIPKAAVADYPYLSNFERAI 214 (318)
T ss_dssp TCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHH------------CSCCSEEEEESCCSCCHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhc------------CcccceEEEeccccccHHHHh
Confidence 111111112222222333332 223589999999999999999885 455666666655432211110
Q ss_pred hc-----------------------------cccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEE
Q 025121 174 NK-----------------------------IEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTF 224 (257)
Q Consensus 174 ~~-----------------------------~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~ 224 (257)
.. ...........+++|+|+++|++|.+||++.+..+++++.. ++++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~l~~----~~~l 290 (318)
T d1l7aa_ 215 DVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLET----KKEL 290 (318)
T ss_dssp HHCCSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCS----SEEE
T ss_pred hcccccccchhhhhhhccccccccccccccccccccccccccCCCCEEEEEECCCCCcCHHHHHHHHHHcCC----CcEE
Confidence 00 00111223467899999999999999999999999998863 6799
Q ss_pred EEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 225 KSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 225 ~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
++++++||.+.++..+++++||+++|+
T Consensus 291 ~~~~~~gH~~~~~~~~~~~~fl~~~Lk 317 (318)
T d1l7aa_ 291 KVYRYFGHEYIPAFQTEKLAFFKQILK 317 (318)
T ss_dssp EEETTCCSSCCHHHHHHHHHHHHHHHC
T ss_pred EEECCCCCCCcHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999886
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.93 E-value=2.3e-25 Score=166.17 Aligned_cols=183 Identities=13% Similarity=0.125 Sum_probs=122.1
Q ss_pred ceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 34 QATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
+++|||+||++++...|..+++.|+++||.|+++|+||||.+..... .............+...+
T Consensus 11 ~~~vvliHG~~~~~~~~~~l~~~L~~~G~~v~~~D~~G~G~s~~~~~---------------~~~~~~~~~~~~~~~~~~ 75 (242)
T d1tqha_ 11 ERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELV---------------HTGPDDWWQDVMNGYEFL 75 (242)
T ss_dssp SCEEEEECCTTCCTHHHHHHHHHHHHTTCEEEECCCTTSSSCHHHHT---------------TCCHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEeCCCCcccccccc---------------ccchhHHHHHHHHHHhhh
Confidence 35789999999999999999999998899999999998874432110 111222233333333333
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC--CCCchhhhhcc---------------
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW--LPGSRNLRNKI--------------- 176 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~--------------- 176 (257)
+.... ++++|+|||+||.+++.++.+. +... .+++++. ...........
T Consensus 76 ~~~~~-~~~~l~G~S~Gg~~~~~~~~~~-----------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (242)
T d1tqha_ 76 KNKGY-EKIAVAGLSLGGVFSLKLGYTV-----------PIEG--IVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSE 141 (242)
T ss_dssp HHHTC-CCEEEEEETHHHHHHHHHHTTS-----------CCSC--EEEESCCSSCCCHHHHHHHHHHHHHHHHHHHTCCH
T ss_pred hhccc-CceEEEEcchHHHHhhhhcccC-----------cccc--cccccccccccchhHHHHHHHHHHHHHhhhccchh
Confidence 33222 3899999999999999999853 4333 3333332 11110000000
Q ss_pred ------------------------ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCC
Q 025121 177 ------------------------EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGH 232 (257)
Q Consensus 177 ------------------------~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H 232 (257)
..........+.+|+++++|++|..+|.+.++.+++.++.. ++++++++++||
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lii~g~~D~~~~~~~~~~~~~~~~~~---~~~~~~~~~~gH 218 (242)
T d1tqha_ 142 EQIEQEMEKFKQTPMKTLKALQELIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESP---VKQIKWYEQSGH 218 (242)
T ss_dssp HHHHHHHHHHTTSCCTTHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCCS---SEEEEEETTCCS
T ss_pred hhHHHHHhhhhhhccchhhcccccccccccccceeccccceeecccCCccCHHHHHHHHHHcCCC---CcEEEEECCCCC
Confidence 00011234567899999999999999999999999988643 679999999999
Q ss_pred ccCHH-----HHHHHHHHHHH
Q 025121 233 YTVPK-----EMDEVCNWLTA 248 (257)
Q Consensus 233 ~~~~~-----~~~~~~~~l~~ 248 (257)
.++.+ ..+.+.+||++
T Consensus 219 ~~~~~~~~~~~~~~i~~Fl~~ 239 (242)
T d1tqha_ 219 VITLDQEKDQLHEDIYAFLES 239 (242)
T ss_dssp SGGGSTTHHHHHHHHHHHHHH
T ss_pred cCccccCHHHHHHHHHHHHHh
Confidence 87632 34677777765
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.93 E-value=5.3e-26 Score=177.26 Aligned_cols=188 Identities=8% Similarity=-0.016 Sum_probs=135.9
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
+..|+|||+||++++...|..++..|...||+|+++|+||+|.+.... .....++...++++.+
T Consensus 45 ~~~p~llllHG~~~~~~~~~~~~~~l~~~~~~vi~~Dl~G~G~S~~~~----------------~~~~~~~~~~~~~l~~ 108 (310)
T d1b6ga_ 45 DAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPV----------------DEEDYTFEFHRNFLLA 108 (310)
T ss_dssp TCSCEEEECCCTTCCGGGGTTTHHHHHHTTCEEEEECCTTSTTSCEES----------------CGGGCCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHhhccCceEEEeeecCcccccccc----------------ccccccccccccchhh
Confidence 356799999999999999999999888789999999999887553211 1123355666777777
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh----hhhc------------
Q 025121 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN----LRNK------------ 175 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~~------------ 175 (257)
+++..... +++|+||||||.+++.+|.+ +|++|+++|++++....... +...
T Consensus 109 ~l~~l~~~-~~~lvGhS~Gg~ia~~~A~~-----------~P~~V~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (310)
T d1b6ga_ 109 LIERLDLR-NITLVVQDWGGFLGLTLPMA-----------DPSRFKRLIIMNACLMTDPVTQPAFSAFVTQPADGFTAWK 176 (310)
T ss_dssp HHHHHTCC-SEEEEECTHHHHHHTTSGGG-----------SGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHHHHH
T ss_pred hhhhcccc-ccccccceecccccccchhh-----------hccccceEEEEcCccCCCcccchhHHHHhhcchhhhhhhh
Confidence 77665444 89999999999999999995 49999999998764221100 0000
Q ss_pred ---------------------------------ccc-----------------c----------hHHHhhhcCCCEEEEc
Q 025121 176 ---------------------------------IEG-----------------S----------HEAARRAASLPILLTH 195 (257)
Q Consensus 176 ---------------------------------~~~-----------------~----------~~~~~~~~~~P~l~~~ 195 (257)
+.. . .......+++|+++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~ 256 (310)
T d1b6ga_ 177 YDLVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQACIDISTEAISFWQNDWNGQTFMAI 256 (310)
T ss_dssp HHHHSCSSCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEEEEEE
T ss_pred hhhccchhhhhhhhhhccCccccHHHHHHHHhhcchhhhhhcchhhhhhhhhhhhhhhhhhhhhhHHhhcccCCCeEEEE
Confidence 000 0 0001235689999999
Q ss_pred cCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhcC
Q 025121 196 GLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARLG 251 (257)
Q Consensus 196 G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l~ 251 (257)
|++|.+++.+....+.+.++.. .++++++++||+++.+..+.+.+.|.++++
T Consensus 257 G~~D~~~~~~~~~~~~~~~~~~----~~~~~i~~~GH~~~~e~pe~v~~~i~~Fl~ 308 (310)
T d1b6ga_ 257 GMKDKLLGPDVMYPMKALINGC----PEPLEIADAGHFVQEFGEQVAREALKHFAE 308 (310)
T ss_dssp ETTCSSSSHHHHHHHHHHSTTC----CCCEEETTCCSCGGGGHHHHHHHHHHHHHH
T ss_pred eCCCCCCCHHHHHHHHHhcCCC----ccEEEECCCcCchhhhCHHHHHHHHHHHHh
Confidence 9999999999888888888642 367889999999876666666666666554
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=5.3e-26 Score=177.80 Aligned_cols=193 Identities=16% Similarity=0.163 Sum_probs=133.4
Q ss_pred eEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHH
Q 025121 24 THVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLD 103 (257)
Q Consensus 24 ~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 103 (257)
.+.|...++ .|+|||+||++++...|..+++.|+++||+|+++|+||+|.+.... ......+.
T Consensus 23 ~i~y~~~G~-gp~vlllHG~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~----------------~~~~~~~~ 85 (322)
T d1zd3a2 23 RLHFVELGS-GPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPP----------------EIEEYCME 85 (322)
T ss_dssp EEEEEEECC-SSEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEEECTTSTTSCCCS----------------CGGGGSHH
T ss_pred EEEEEEEcC-CCeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEecccccccccccc----------------cccccccc
Confidence 344444443 4789999999999999999999998789999999999876543211 11233456
Q ss_pred HHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-------------
Q 025121 104 ASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR------------- 170 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------------- 170 (257)
+.+.++.+++++.... +++++||||||.+++.++.+. |.++.+++++++......
T Consensus 86 ~~~~~i~~l~~~l~~~-~~~lvGhS~Gg~va~~~a~~~-----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 153 (322)
T d1zd3a2 86 VLCKEMVTFLDKLGLS-QAVFIGHDWGGMLVWYMALFY-----------PERVRAVASLNTPFIPANPNMSPLESIKANP 153 (322)
T ss_dssp HHHHHHHHHHHHHTCS-CEEEEEETHHHHHHHHHHHHC-----------TTTEEEEEEESCCCCCCCSSSCHHHHHHTCG
T ss_pred ccchhhhhhhhccccc-ccccccccchHHHHHHHHHhC-----------CccccceEEEcccccccccccchhhhhhccc
Confidence 6666666666665444 899999999999999999964 889999988764211000
Q ss_pred ------------------------hhhhcc-----------------------------cc-------------------
Q 025121 171 ------------------------NLRNKI-----------------------------EG------------------- 178 (257)
Q Consensus 171 ------------------------~~~~~~-----------------------------~~------------------- 178 (257)
.+.... ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (322)
T d1zd3a2 154 VFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGF 233 (322)
T ss_dssp GGHHHHHTTSTTHHHHHHHHTHHHHHHHHSCCTTSCCCCTTSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHHHHTT
T ss_pred hhhhHHhhhccchhhhhhhhhHHHHHHHHhhccchhhhhHHHHhhhhccccccccchhhhhhccHHHHHHHHHHHhhccc
Confidence 000000 00
Q ss_pred ----------------chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHH
Q 025121 179 ----------------SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEV 242 (257)
Q Consensus 179 ----------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~ 242 (257)
........+++|+++++|++|.+++.+..+.+.+.++ +.++++++++||+++.|..+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~e~p~~v 308 (322)
T d1zd3a2 234 RGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIP-----HLKRGHIEDCGHWTQMDKPTEV 308 (322)
T ss_dssp HHHHHTTSCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCT-----TCEEEEETTCCSCHHHHSHHHH
T ss_pred ccccccccccccccccchhhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-----CCEEEEECCCCCchHHhCHHHH
Confidence 0000113468999999999999999988887777765 6789999999999886555444
Q ss_pred HHHHHHhc
Q 025121 243 CNWLTARL 250 (257)
Q Consensus 243 ~~~l~~~l 250 (257)
.+-|.++|
T Consensus 309 ~~~i~~FL 316 (322)
T d1zd3a2 309 NQILIKWL 316 (322)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444433
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.92 E-value=1e-24 Score=166.32 Aligned_cols=192 Identities=20% Similarity=0.166 Sum_probs=130.5
Q ss_pred EEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025121 25 HVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 25 ~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
+.|...++. |+|||+||++++...|..++..|.+.||+|+++|+||+|.+.... ...+..+
T Consensus 11 i~y~~~G~g-~pvvllHG~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~------------------~~~~~~~ 71 (273)
T d1a8sa_ 11 IYYKDWGSG-QPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPW------------------SGNDMDT 71 (273)
T ss_dssp EEEEEESCS-SEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCS------------------SCCSHHH
T ss_pred EEEEEECCC-CeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEechhcCcccccc------------------ccccccc
Confidence 344444443 568899999999999999999997789999999999886543211 1224455
Q ss_pred HHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhh-----------h
Q 025121 105 SAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL-----------R 173 (257)
Q Consensus 105 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-----------~ 173 (257)
.++++.++++..... +.+++|||+||.++..++++ ..|+++.+++++++..+..... .
T Consensus 72 ~~~~~~~~l~~l~~~-~~~lvg~s~gG~~~~~~~a~----------~~p~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 140 (273)
T d1a8sa_ 72 YADDLAQLIEHLDLR-DAVLFGFSTGGGEVARYIGR----------HGTARVAKAGLISAVPPLMLKTEANPGGLPMEVF 140 (273)
T ss_dssp HHHHHHHHHHHTTCC-SEEEEEETHHHHHHHHHHHH----------HCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHH
T ss_pred hHHHHHHHHHhcCcc-ceeeeeeccCCccchhhhhh----------hhhhccceeEEEecccccccccccccccchhhhh
Confidence 666677777665444 78899999988766666554 2378899888886532211000 0
Q ss_pred hcc----------------------------------------------------------ccchHHHhhhcCCCEEEEc
Q 025121 174 NKI----------------------------------------------------------EGSHEAARRAASLPILLTH 195 (257)
Q Consensus 174 ~~~----------------------------------------------------------~~~~~~~~~~~~~P~l~~~ 195 (257)
... ..........+++|+++++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~ 220 (273)
T d1a8sa_ 141 DGIRQASLADRSQLYKDLASGPFFGFNQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVH 220 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSSTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHTCCSCEEEEE
T ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhcccchhhhhHHHHHHHHHhhcccchhhhhhhHHHhhhhhhhHHHHhhccceEEEe
Confidence 000 0000013356789999999
Q ss_pred cCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 196 GLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 196 G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
|++|.++|.+....+.+.+.. +++++++|++||.++.+..+.+.+.|.++|
T Consensus 221 g~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl 271 (273)
T d1a8sa_ 221 GDADQVVPIEASGIASAALVK----GSTLKIYSGAPHGLTDTHKDQLNADLLAFI 271 (273)
T ss_dssp ETTCSSSCSTTTHHHHHHHST----TCEEEEETTCCSCHHHHTHHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHhCC----CCEEEEECCCCCchHHhCHHHHHHHHHHHc
Confidence 999999999888877766532 678999999999988666655555555444
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.92 E-value=1.2e-24 Score=165.59 Aligned_cols=213 Identities=15% Similarity=0.069 Sum_probs=143.5
Q ss_pred ccCCCCCceEEeCCC-CCCceEEEEEcc--CCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCC
Q 025121 16 RRTFEFGRTHVVRPK-GKHQATIVWLHG--LGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELS 92 (257)
Q Consensus 16 ~~~~~~~~~~~~~~~-~~~~~~vi~~HG--~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~ 92 (257)
.++.++..+++.++. ..+.|+||++|| ++.....|..+++.|+++||.|+++|.++++... ..|......
T Consensus 20 ~dG~~i~~~l~~p~~~~~~~Pviv~~HGG~~~~~~~~~~~~~~~la~~G~~v~~~d~r~~~~~g------~~~~~~~~~- 92 (260)
T d2hu7a2 20 FDGSRVPTYVLESGRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYG------EEWRLKIIG- 92 (260)
T ss_dssp TTSCEEEEEEEEETTSCSSEEEEEEECSSSSCCCCSSCCHHHHHHHHHTCEEEEECCTTCSSSC------HHHHHTTTT-
T ss_pred CCCCEEEEEEEeCCCCCCCceEEEEECCCCccCCCccccHHHHHHHhhccccccceeeeccccc------ccccccccc-
Confidence 344555444444433 356789999998 3444556777888888899999999988653211 111111100
Q ss_pred CCCCCchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhh
Q 025121 93 DDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL 172 (257)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 172 (257)
......+.+.. .+.+++.+.....++.++|+|+||.+++.++... ++.+++++..++........
T Consensus 93 ---~~~~~~~~D~~-~~~~~l~~~~~~~~~~i~g~s~gg~~~~~~~~~~-----------~~~~~a~i~~~~~~~~~~~~ 157 (260)
T d2hu7a2 93 ---DPCGGELEDVS-AAARWARESGLASELYIMGYSYGGYMTLCALTMK-----------PGLFKAGVAGASVVDWEEMY 157 (260)
T ss_dssp ---CTTTHHHHHHH-HHHHHHHHTTCEEEEEEEEETHHHHHHHHHHHHS-----------TTSSSEEEEESCCCCHHHHH
T ss_pred ---ccchhhhhhhc-ccccccccccccceeeccccccccccccchhccC-----------Ccccccccccccchhhhhhh
Confidence 00112222222 3333444444445999999999999999999854 78899999888865432211
Q ss_pred hhc-------------------cccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCc
Q 025121 173 RNK-------------------IEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHY 233 (257)
Q Consensus 173 ~~~-------------------~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~ 233 (257)
... ....+......+++|+|++||++|.+||++.+.++++.+++.++ +++++++||++|.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~liihG~~D~~vp~~~~~~~~~~l~~~~~-~~~~~~~~g~~H~ 236 (260)
T d2hu7a2 158 ELSDAAFRNFIEQLTGGSREIMRSRSPINHVDRIKEPLALIHPQNDSRTPLKPLLRLMGELLARGK-TFEAHIIPDAGHA 236 (260)
T ss_dssp HTCCHHHHHHHHHHHCSCHHHHHHTCGGGCGGGCCSCEEEEEETTCSSSCSHHHHHHHHHHHHTTC-CEEEEEETTCCSS
T ss_pred cccccccccccccccccccccccccchhhcccccCCCceeeecccCceecHHHHHHHHHHHHHCCC-CeEEEEECcCCCC
Confidence 100 01112223466789999999999999999999999999999887 8899999999998
Q ss_pred cCH-----HHHHHHHHHHHHhcC
Q 025121 234 TVP-----KEMDEVCNWLTARLG 251 (257)
Q Consensus 234 ~~~-----~~~~~~~~~l~~~l~ 251 (257)
+.. +.+..+.+||.+.++
T Consensus 237 ~~~~e~~~~~~~~~~~fl~~hl~ 259 (260)
T d2hu7a2 237 INTMEDAVKILLPAVFFLATQRE 259 (260)
T ss_dssp CCBHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChHhHHHHHHHHHHHHHHHhc
Confidence 762 345788899998775
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.92 E-value=7.5e-24 Score=163.90 Aligned_cols=195 Identities=16% Similarity=0.053 Sum_probs=137.3
Q ss_pred CceEEeCCCCC-CceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchh
Q 025121 22 GRTHVVRPKGK-HQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWE 100 (257)
Q Consensus 22 ~~~~~~~~~~~-~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~ 100 (257)
+..+.|...++ ..|+|||+||++++...|..+...|+ .+|+|+++|+||+|.+.... .....
T Consensus 21 G~~i~y~~~G~~~g~pvvllHG~~~~~~~w~~~~~~l~-~~~~vi~~D~rG~G~S~~~~----------------~~~~~ 83 (313)
T d1wm1a_ 21 GHRIYWELSGNPNGKPAVFIHGGPGGGISPHHRQLFDP-ERYKVLLFDQRGCGRSRPHA----------------SLDNN 83 (313)
T ss_dssp SCEEEEEEEECTTSEEEEEECCTTTCCCCGGGGGGSCT-TTEEEEEECCTTSTTCBSTT----------------CCTTC
T ss_pred CcEEEEEEecCCCCCeEEEECCCCCcccchHHHHHHhh-cCCEEEEEeCCCcccccccc----------------ccccc
Confidence 34455544433 45789999999999999999988886 69999999999887553221 11122
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhh------
Q 025121 101 GLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN------ 174 (257)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~------ 174 (257)
......+++..++...... +++++|||+||.+++.++... ++++..++.++...........
T Consensus 84 ~~~~~~~d~~~~~~~~~~~-~~~~vg~s~g~~~~~~~a~~~-----------~~~v~~~v~~~~~~~~~~~~~~~~~~~~ 151 (313)
T d1wm1a_ 84 TTWHLVADIERLREMAGVE-QWLVFGGSWGSTLALAYAQTH-----------PERVSEMVLRGIFTLRKQRLHWYYQDGA 151 (313)
T ss_dssp SHHHHHHHHHHHHHHTTCS-SEEEEEETHHHHHHHHHHHHC-----------GGGEEEEEEESCCCCCHHHHHHHHTSSG
T ss_pred chhhHHHHHHhhhhccCCC-cceeEeeecCCchhhHHHHHH-----------hhhheeeeeccccccccccccccccccc
Confidence 3445555555555555444 899999999999999999954 8889888887654221100000
Q ss_pred -------------c-----------------------------------------c-c----------------------
Q 025121 175 -------------K-----------------------------------------I-E---------------------- 177 (257)
Q Consensus 175 -------------~-----------------------------------------~-~---------------------- 177 (257)
. . .
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (313)
T d1wm1a_ 152 SRFFPEKWERVLSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENH 231 (313)
T ss_dssp GGTSHHHHHHHHTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHH
T ss_pred chhhhhhhhhhhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhhhhhhhhhhhhhcccchhhhhhhhhhHHhhhhhhhhh
Confidence 0 0 0
Q ss_pred ------------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC-HHHHHHHHH
Q 025121 178 ------------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-PKEMDEVCN 244 (257)
Q Consensus 178 ------------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-~~~~~~~~~ 244 (257)
.........+++|+++++|++|.++|++.++.+.+.++ ++++++++++||... ++..+.+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~D~~~p~~~~~~l~~~~p-----~a~~~~i~~aGH~~~eP~~~~~lv~ 306 (313)
T d1wm1a_ 232 YFTHLGFLESDDQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWP-----EAELHIVEGAGHSYDEPGILHQLMI 306 (313)
T ss_dssp HHHTGGGCSSTTHHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHCT-----TSEEEEETTCCSSTTSHHHHHHHHH
T ss_pred hhhhhcccccchhhhhhhhhhCCCCEEEEEECCCCccCHHHHHHHHHHCC-----CCEEEEECCCCCCcCCchHHHHHHH
Confidence 00000123367999999999999999999999999997 679999999999865 566778888
Q ss_pred HHHHhc
Q 025121 245 WLTARL 250 (257)
Q Consensus 245 ~l~~~l 250 (257)
++.++.
T Consensus 307 a~~~f~ 312 (313)
T d1wm1a_ 307 ATDRFA 312 (313)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 877753
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.92 E-value=1.6e-24 Score=156.66 Aligned_cols=170 Identities=12% Similarity=0.131 Sum_probs=118.1
Q ss_pred EEEEEccCCCCccc--hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHh
Q 025121 36 TIVWLHGLGDNGSS--WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLL 113 (257)
Q Consensus 36 ~vi~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (257)
.||++||++++... +..+++.|+..||.|+++|+|+++. ....++++.+...+
T Consensus 3 ~V~~vHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~p~~~~-------------------------~~~~~~~~~l~~~~ 57 (186)
T d1uxoa_ 3 QVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPNPLQ-------------------------PRLEDWLDTLSLYQ 57 (186)
T ss_dssp EEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSCTTS-------------------------CCHHHHHHHHHTTG
T ss_pred EEEEECCCCCCcchhHHHHHHHHHHhCCCEEEEeccCCCCc-------------------------chHHHHHHHHHHHH
Confidence 79999999998765 6678899988999999999986431 11244455555544
Q ss_pred ccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc----ccchHHHhhhcCC
Q 025121 114 STEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI----EGSHEAARRAASL 189 (257)
Q Consensus 114 ~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 189 (257)
+.. ..+++|+||||||.+++.++.+. .....+.+++..+++........... ..........+..
T Consensus 58 ~~~--~~~~~lvGhS~Gg~~a~~~a~~~---------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (186)
T d1uxoa_ 58 HTL--HENTYLVAHSLGCPAILRFLEHL---------QLRAALGGIILVSGFAKSLPTLQMLDEFTQGSFDHQKIIESAK 126 (186)
T ss_dssp GGC--CTTEEEEEETTHHHHHHHHHHTC---------CCSSCEEEEEEETCCSSCCTTCGGGGGGTCSCCCHHHHHHHEE
T ss_pred hcc--CCCcEEEEechhhHHHHHHHHhC---------CccceeeEEeecccccccchhhhhhhhhhcccccccccccCCC
Confidence 432 34899999999999999999864 11234555666666544332211111 1122334456689
Q ss_pred CEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCH-------HHHHHHHHHHH
Q 025121 190 PILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVP-------KEMDEVCNWLT 247 (257)
Q Consensus 190 P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~-------~~~~~~~~~l~ 247 (257)
|++++||++|++||++.++.+++.+ ++++++++++||.... +..+.+.+||.
T Consensus 127 p~lvi~g~~D~~vp~~~~~~l~~~~------~~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~~~ 185 (186)
T d1uxoa_ 127 HRAVIASKDDQIVPFSFSKDLAQQI------DAALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFS 185 (186)
T ss_dssp EEEEEEETTCSSSCHHHHHHHHHHT------TCEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHH
T ss_pred CEEEEecCCCCCCCHHHHHHHHHHc------CCEEEEeCCCCCcCccccCcccHHHHHHHHHHHc
Confidence 9999999999999999999999887 3589999999997653 34455555553
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=99.92 E-value=3.4e-24 Score=163.54 Aligned_cols=184 Identities=23% Similarity=0.240 Sum_probs=124.1
Q ss_pred CCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
+..|+|||+||++++...|..+++.|...||+|+++|+||+|.+... ....++.+.++++..
T Consensus 19 ~~~~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~s~~~------------------~~~~~~~~~~~~~~~ 80 (275)
T d1a88a_ 19 RDGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQP------------------STGHDMDTYAADVAA 80 (275)
T ss_dssp TTSCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCC------------------SSCCSHHHHHHHHHH
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEecccccccccc------------------ccccccccccccccc
Confidence 34578999999999999999999998778999999999987643211 112234455556666
Q ss_pred HhccCCCCceEEEEEech-hHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh---------------hc
Q 025121 112 LLSTEPADVKVGIGGFSM-GAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR---------------NK 175 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~-Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---------------~~ 175 (257)
+++..... +++++|||+ ||.+++.++.+ +|+++++++++++..+...... ..
T Consensus 81 ~l~~l~~~-~~~~vg~s~~G~~~~~~~a~~-----------~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (275)
T d1a88a_ 81 LTEALDLR-GAVHIGHSTGGGEVARYVARA-----------EPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAA 148 (275)
T ss_dssp HHHHHTCC-SEEEEEETHHHHHHHHHHHHS-----------CTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHHHH
T ss_pred cccccccc-ccccccccccccchhhccccc-----------Ccchhhhhhhhcccccccccchhhhhhhhhhhhhhhhhh
Confidence 66554333 778888887 56666667764 4889999998875422110000 00
Q ss_pred c------------------------------------------------------ccchHHHhhhcCCCEEEEccCCCCc
Q 025121 176 I------------------------------------------------------EGSHEAARRAASLPILLTHGLCDDV 201 (257)
Q Consensus 176 ~------------------------------------------------------~~~~~~~~~~~~~P~l~~~G~~D~~ 201 (257)
. ..........+++|+++++|++|.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~ 228 (275)
T d1a88a_ 149 LAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQV 228 (275)
T ss_dssp HHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTCSS
T ss_pred hhhhhHHHHHhhhhhhhhhcccchhhHHHHHHHHHHHhhcccchHHHHHHHHHhhhhhhhHHHHhhccccceeecCCCCC
Confidence 0 0000012345789999999999999
Q ss_pred ccchhh-HHHHHHhhhcCceeeEEEEecCCCCccCHHHHHHHHHHHHHhc
Q 025121 202 VPYKYG-EKSANCLSISGFRHLTFKSFEGLGHYTVPKEMDEVCNWLTARL 250 (257)
Q Consensus 202 v~~~~~-~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~l~~~l 250 (257)
+|.+.. +.+.+.++ ++++++++++||.++.+..+.+.+-|.+++
T Consensus 229 ~~~~~~~~~~~~~~~-----~~~~~~i~~~gH~~~~e~p~~~~~~i~~Fl 273 (275)
T d1a88a_ 229 VPYADAAPKSAELLA-----NATLKSYEGLPHGMLSTHPEVLNPDLLAFV 273 (275)
T ss_dssp SCSTTTHHHHHHHST-----TEEEEEETTCCTTHHHHCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHhCC-----CCEEEEECCCCCchHHhCHHHHHHHHHHHH
Confidence 998765 44555554 679999999999988666655555555544
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.91 E-value=4.1e-23 Score=156.83 Aligned_cols=177 Identities=19% Similarity=0.201 Sum_probs=128.4
Q ss_pred CCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025121 31 GKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
+.+.|+||++||++++...+..+++.|+.+||.|+++|.++.... ......++.+.++.+.
T Consensus 49 ~g~~P~Vv~~HG~~g~~~~~~~~a~~lA~~Gy~V~~~d~~~~~~~-------------------~~~~~~d~~~~~~~l~ 109 (260)
T d1jfra_ 49 DGTFGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTNTTLDQ-------------------PDSRGRQLLSALDYLT 109 (260)
T ss_dssp TCCEEEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECCSSTTCC-------------------HHHHHHHHHHHHHHHH
T ss_pred CCCccEEEEECCCCCCHHHHHHHHHHHHhCCCEEEEEeeCCCcCC-------------------chhhHHHHHHHHHHHH
Confidence 346799999999999999999999999999999999997642100 0000122233333333
Q ss_pred HHhcc--CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhhhcC
Q 025121 111 NLLST--EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAAS 188 (257)
Q Consensus 111 ~~~~~--~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (257)
+.... ..+.++|+++|||+||.+++.++.. ..++.+++.++++.+.... ...+
T Consensus 110 ~~~~~~~~vD~~rI~v~G~S~GG~~al~aa~~------------~~~~~A~v~~~~~~~~~~~-------------~~~~ 164 (260)
T d1jfra_ 110 QRSSVRTRVDATRLGVMGHSMGGGGSLEAAKS------------RTSLKAAIPLTGWNTDKTW-------------PELR 164 (260)
T ss_dssp HTSTTGGGEEEEEEEEEEETHHHHHHHHHHHH------------CTTCSEEEEESCCCSCCCC-------------TTCC
T ss_pred hhhhhhccccccceEEEeccccchHHHHHHhh------------hccchhheeeecccccccc-------------cccc
Confidence 32211 1223599999999999999999985 5688999999987654321 3468
Q ss_pred CCEEEEccCCCCcccchhhHH-HHHHhhhcCceeeEEEEecCCCCccC----HHHHHHHHHHHHHhcCcC
Q 025121 189 LPILLTHGLCDDVVPYKYGEK-SANCLSISGFRHLTFKSFEGLGHYTV----PKEMDEVCNWLTARLGLE 253 (257)
Q Consensus 189 ~P~l~~~G~~D~~v~~~~~~~-~~~~l~~~~~~~~~~~~~~g~~H~~~----~~~~~~~~~~l~~~l~~~ 253 (257)
+|+|+++|++|.++|++...+ +++.++ .+. +.++++++|++|.+. .+..+.++.||+.+|...
T Consensus 165 ~P~l~i~G~~D~~vp~~~~~~~~~~~~~-~~~-~~~~~~i~ga~H~~~~~~~~~~~~~~~~wl~~~L~~d 232 (260)
T d1jfra_ 165 TPTLVVGADGDTVAPVATHSKPFYESLP-GSL-DKAYLELRGASHFTPNTSDTTIAKYSISWLKRFIDSD 232 (260)
T ss_dssp SCEEEEEETTCSSSCTTTTHHHHHHHSC-TTS-CEEEEEETTCCTTGGGSCCHHHHHHHHHHHHHHHSCC
T ss_pred cceeEEecCCCCCCCHHHHHHHHHHhcc-cCC-CEEEEEECCCccCCCCCChHHHHHHHHHHHHHHhcCc
Confidence 999999999999999877544 455443 333 678999999999864 455678899999988754
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.91 E-value=6.2e-23 Score=154.73 Aligned_cols=109 Identities=14% Similarity=0.178 Sum_probs=74.0
Q ss_pred EEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025121 25 HVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 25 ~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
+.+...+..+|+|||+||++++...|..+++.|++.||+|+++|+||||.+..... ..... ..
T Consensus 7 lh~~~~~~~~P~ivllHG~~~~~~~~~~~~~~L~~~g~~vi~~Dl~G~G~s~~~~~----------------~~~~~-~~ 69 (264)
T d1r3da_ 7 LHFAKPTARTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERHC----------------DNFAE-AV 69 (264)
T ss_dssp EESSCCBTTBCEEEEECCTTCCGGGGHHHHHHHTTSSCEEEEECCTTCSSCC-----------------------CH-HH
T ss_pred EEEcCCCCCCCeEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEEecccccccccccc----------------cccch-hh
Confidence 44444456678999999999999999999999988899999999998875432210 00111 11
Q ss_pred HHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEe
Q 025121 105 SAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGL 162 (257)
Q Consensus 105 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 162 (257)
.......... .....+++++||||||.+++.++.+. +..+.+++.+
T Consensus 70 ~~~~~~~~~~-~~~~~~~~lvGhS~Gg~ia~~~a~~~-----------~~~~~~~~~~ 115 (264)
T d1r3da_ 70 EMIEQTVQAH-VTSEVPVILVGYSLGGRLIMHGLAQG-----------AFSRLNLRGA 115 (264)
T ss_dssp HHHHHHHHTT-CCTTSEEEEEEETHHHHHHHHHHHHT-----------TTTTSEEEEE
T ss_pred hhhhhccccc-ccccCceeeeeecchHHHHHHHHHhC-----------chhccccccc
Confidence 1112222222 22334999999999999999999864 6666666544
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.90 E-value=4.4e-24 Score=170.20 Aligned_cols=106 Identities=14% Similarity=0.003 Sum_probs=66.9
Q ss_pred CCCceEEEEEccCCCCccchH------HHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025121 31 GKHQATIVWLHGLGDNGSSWS------QLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~------~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
..++|+||++||++++...|. .++..|+++||+|+++|+||+|.+......... .........+.....+
T Consensus 55 ~~~~~~vlllHG~~~~~~~~~~~~~~~sla~~L~~~Gy~V~~~D~rG~G~S~~~~~~~~~----~~~~~~~~~~~~~~~D 130 (377)
T d1k8qa_ 55 IGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYYSPD----SVEFWAFSFDEMAKYD 130 (377)
T ss_dssp TTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTTSCEESSSCTT----STTTTCCCHHHHHHTH
T ss_pred CCCCCeEEEECCCccchhHHhhcCccchHHHHHHHCCCEEEEEcCCCCCCCCCCCCCCCc----chhhccCCHHHHhhhh
Confidence 346789999999999999884 366777789999999999998876543211100 0000000011111222
Q ss_pred HHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhc
Q 025121 105 SAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 105 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
....+..+++... .++++|+||||||.+++.++.+.
T Consensus 131 l~~~i~~i~~~~g-~~~v~lvGhS~GG~ia~~~a~~~ 166 (377)
T d1k8qa_ 131 LPATIDFILKKTG-QDKLHYVGHSQGTTIGFIAFSTN 166 (377)
T ss_dssp HHHHHHHHHHHHC-CSCEEEEEETHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcC-CCCEEEEEecchHHHHHHHHHhh
Confidence 2333333333322 24999999999999999999965
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=2.8e-23 Score=157.83 Aligned_cols=217 Identities=8% Similarity=0.022 Sum_probs=135.8
Q ss_pred cCCCCCceEEeCCC---CCCceEEEEEccCCCC---ccch--HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccC
Q 025121 17 RTFEFGRTHVVRPK---GKHQATIVWLHGLGDN---GSSW--SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDV 88 (257)
Q Consensus 17 ~~~~~~~~~~~~~~---~~~~~~vi~~HG~~~~---~~~~--~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~ 88 (257)
++.++..+++.++. +++.|+||++||.++. ...| ......|+++||.|+++|.||.+ +++ ..|...
T Consensus 11 dg~~l~~~l~~P~~~~~~~k~Pviv~~HGGp~~~~~~~~~~~~~~~~~la~~G~~vv~~d~rGs~-----~~g-~~~~~~ 84 (258)
T d1xfda2 11 DDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSG-----FQG-TKLLHE 84 (258)
T ss_dssp TTEEECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCS-----SSH-HHHHHT
T ss_pred CCeEEEEEEEECCCcCCCCceeEEEEEcCCccccCcCCCcCcchHHHHHhcCCcEEEEecccccc-----ccc-hhHhhh
Confidence 45556666665544 4456999999995321 1222 22344577789999999987532 111 122111
Q ss_pred CCCCCCCCCchhhHHHHHHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCC
Q 025121 89 GELSDDGPEDWEGLDASAAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP 167 (257)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 167 (257)
.. .......+.+....+..++++.. +.++|+++|+|+||++++.++...+. ..+..+...+.+.+...
T Consensus 85 ~~----~~~g~~~~~d~~~~i~~l~~~~~id~~ri~v~G~S~GG~~a~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 153 (258)
T d1xfda2 85 VR----RRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGE-------NQGQTFTCGSALSPITD 153 (258)
T ss_dssp TT----TCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSS-------TTCCCCSEEEEESCCCC
T ss_pred hh----ccchhHHHHHHHHhhhhhcccccccccceeccccCchHHHHHHHHhcCCc-------ccceeeeeeecccccee
Confidence 10 11123345555666666655543 34699999999999999888764311 12344555555554321
Q ss_pred Cchhh--------------hhcc--ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCC
Q 025121 168 GSRNL--------------RNKI--EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLG 231 (257)
Q Consensus 168 ~~~~~--------------~~~~--~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~ 231 (257)
..... .... ...........+.|+|++||+.|..||++.+.++.+.+++.+. +++++++|+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~p~Li~hG~~D~~vp~~~s~~~~~~l~~~~~-~~~~~~~p~~~ 232 (258)
T d1xfda2 154 FKLYASAFSERYLGLHGLDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAELITQLIRGKA-NYSLQIYPDES 232 (258)
T ss_dssp TTSSBHHHHHHHHCCCSSCCSSTTTTCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHHHHHHHHTTC-CCEEEEETTCC
T ss_pred eeccccccccccccccccchHHhhccchhhhhhhhhcccccccccCCCCCcCHHHHHHHHHHHHHCCC-CEEEEEECCCC
Confidence 11000 0000 0111122233478999999999999999999999999999887 88999999999
Q ss_pred CccC-----HHHHHHHHHHHHHhcC
Q 025121 232 HYTV-----PKEMDEVCNWLTARLG 251 (257)
Q Consensus 232 H~~~-----~~~~~~~~~~l~~~l~ 251 (257)
|.+. ....+.+.+||.+.|+
T Consensus 233 H~~~~~~~~~~~~~~~~~f~~~~~~ 257 (258)
T d1xfda2 233 HYFTSSSLKQHLYRSIINFFVECFR 257 (258)
T ss_dssp SSCCCHHHHHHHHHHHHHHHTTTTC
T ss_pred CCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 9875 2346888999998876
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=99.89 E-value=7.6e-23 Score=157.20 Aligned_cols=113 Identities=10% Similarity=0.014 Sum_probs=80.8
Q ss_pred EEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025121 25 HVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 25 ~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
+.|...++ .|+|||+||++++...|..++..|+ .+|+|+++|+||+|.+...... .........
T Consensus 20 i~y~~~G~-g~~vvllHG~~~~~~~~~~~~~~L~-~~~~vi~~Dl~G~G~S~~~~~~--------------~~~~~~~~~ 83 (298)
T d1mj5a_ 20 MAYIDEGT-GDPILFQHGNPTSSYLWRNIMPHCA-GLGRLIACDLIGMGDSDKLDPS--------------GPERYAYAE 83 (298)
T ss_dssp EEEEEESC-SSEEEEECCTTCCGGGGTTTGGGGT-TSSEEEEECCTTSTTSCCCSSC--------------STTSSCHHH
T ss_pred EEEEEEcC-CCcEEEECCCCCCHHHHHHHHHHHh-cCCEEEEEeCCCCCCCCCCccc--------------cccccccch
Confidence 33444443 4689999999999999999999997 6799999999988755432210 011122233
Q ss_pred HHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEecc
Q 025121 105 SAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG 164 (257)
Q Consensus 105 ~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 164 (257)
....+..++......+++.++||||||.+++.++.+. |.++.+++.+.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~lvGhS~Gg~va~~~a~~~-----------p~~v~~l~~~~~ 132 (298)
T d1mj5a_ 84 HRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRH-----------RERVQGIAYMEA 132 (298)
T ss_dssp HHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHHHHT-----------GGGEEEEEEEEE
T ss_pred hhhhhccccccccccccCeEEEecccchhHHHHHHHH-----------Hhhhheeecccc
Confidence 4444444454444445999999999999999999964 889999887755
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.89 E-value=2.7e-22 Score=152.29 Aligned_cols=208 Identities=10% Similarity=0.008 Sum_probs=129.1
Q ss_pred ceEEeCCC---CCCceEEEEEccCCC-----CccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCC
Q 025121 23 RTHVVRPK---GKHQATIVWLHGLGD-----NGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDD 94 (257)
Q Consensus 23 ~~~~~~~~---~~~~~~vi~~HG~~~-----~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~ 94 (257)
..++.++. +++.|+||++||.++ ....+......++.+||.|+.+|.++.+... ..|.+...
T Consensus 18 ~~l~lP~~~~~~kk~P~iv~~HGGp~~~~~~~~~~~~~~~~~~a~~g~~V~~~d~rg~~~~~------~~~~~~~~---- 87 (258)
T d2bgra2 18 YQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQG------DKIMHAIN---- 87 (258)
T ss_dssp EEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSC------HHHHGGGT----
T ss_pred EEEEECCCcCCCCCeeEEEEEcCCCCcccCCCccCcCHHHHHHhcCCcEEEeecccccCCcc------hHHHHhhh----
Confidence 34444443 345599999999411 1122223334456789999999988643111 11111110
Q ss_pred CCCchhhHHHHHHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhh-
Q 025121 95 GPEDWEGLDASAAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL- 172 (257)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~- 172 (257)
.......+.+....+..+.+... ..++++++|+|+||.+++.++... ++.+..++..++........
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 156 (258)
T d2bgra2 88 RRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSG-----------SGVFKCGIAVAPVSRWEYYDS 156 (258)
T ss_dssp TCTTSHHHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTT-----------CSCCSEEEEESCCCCGGGSBH
T ss_pred hhhhhHHHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccC-----------CCcceEEEEeecccccccccc
Confidence 01112233344444444444332 235899999999999999998843 66666666665432111000
Q ss_pred ---------------hh-ccccchHH-HhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC
Q 025121 173 ---------------RN-KIEGSHEA-ARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV 235 (257)
Q Consensus 173 ---------------~~-~~~~~~~~-~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 235 (257)
.. ........ .....++|++++||++|.+||++.+.++++.++++++ +++++++||++|.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~l~~~g~-~~~~~~~~g~~H~~~ 235 (258)
T d2bgra2 157 VYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGV-DFQAMWYTDEDHGIA 235 (258)
T ss_dssp HHHHHHHCCCSTTTTHHHHHHSCSGGGGGGGGGSEEEEEEETTCSSSCTHHHHHHHHHHHHHTC-CCEEEEETTCCTTCC
T ss_pred cccchhcccccchhhHHHhhcccccccccccccCChheeeecCCCcccHHHHHHHHHHHHHCCC-CEEEEEECCCCCCCC
Confidence 00 00001111 1222458999999999999999999999999999887 899999999999875
Q ss_pred -----HHHHHHHHHHHHHhcCc
Q 025121 236 -----PKEMDEVCNWLTARLGL 252 (257)
Q Consensus 236 -----~~~~~~~~~~l~~~l~~ 252 (257)
.+..+.+.+||++.|+.
T Consensus 236 ~~~~~~~~~~~i~~fl~~~l~~ 257 (258)
T d2bgra2 236 SSTAHQHIYTHMSHFIKQCFSL 257 (258)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCccHHHHHHHHHHHHHHHhcC
Confidence 23468899999998864
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.89 E-value=1e-22 Score=152.21 Aligned_cols=204 Identities=17% Similarity=0.121 Sum_probs=129.2
Q ss_pred CCCCCceEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCC-CCCCCC
Q 025121 18 TFEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGE-LSDDGP 96 (257)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~-~~~~~~ 96 (257)
+..+.. ++..|.+.+.|+||++|+..+.......+++.|+..||.|+++|+.+++........ ..+..... ......
T Consensus 13 g~~~~a-~~~~P~~~~~P~vl~~h~~~G~~~~~~~~a~~lA~~Gy~vl~pd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 90 (233)
T d1dina_ 13 GHTFGA-LVGSPAKAPAPVIVIAQEIFGVNAFMRETVSWLVDQGYAAVCPDLYARQAPGTALDP-QDERQREQAYKLWQA 90 (233)
T ss_dssp SCEECE-EEECCSSSSEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCT-TSHHHHHHHHHHHHT
T ss_pred CCEEEE-EEECCCCCCceEEEEeCCCCCCCHHHHHHHHHHHhcCCcceeeeeccCCCcCcccCh-HHHHHHHHHHHHhhh
Confidence 344444 445556678999999998777666777888999989999999997543221110000 00000000 000000
Q ss_pred CchhhHHHHHHHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhc
Q 025121 97 EDWEGLDASAAHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNK 175 (257)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 175 (257)
........++....+++... ....+|.++|+|+||.+++.++. .+.+.+.+++.+......
T Consensus 91 ~~~~~~~~d~~aa~~~l~~~~~~~~~i~~~G~s~Gg~~a~~~a~-------------~~~~~~~~~~~~~~~~~~----- 152 (233)
T d1dina_ 91 FDMEAGVGDLEAAIRYARHQPYSNGKVGLVGYCLGGALAFLVAA-------------KGYVDRAVGYYGVGLEKQ----- 152 (233)
T ss_dssp CCHHHHHHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHH-------------HTCSSEEEEESCSCGGGG-----
T ss_pred hhhHHHHHHHHHHHHHHHhCCCCCCceEEEEecccccceeeccc-------------ccccceeccccccccccc-----
Confidence 11122223333333444443 23359999999999999999987 345666776665432211
Q ss_pred cccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC------------HHHHHHHH
Q 025121 176 IEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV------------PKEMDEVC 243 (257)
Q Consensus 176 ~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~------------~~~~~~~~ 243 (257)
......+++|+++++|++|+.+|.+..+.+.+.++. +. ++++++|||++|.+. .+.+++++
T Consensus 153 -----~~~~~~i~~Pvl~~~G~~D~~vp~e~~~~~~~~~~~-~~-~~~~~~y~ga~HgF~~~~~~~y~~~aa~~a~~r~~ 225 (233)
T d1dina_ 153 -----LNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGA-NP-LLQVHWYEEAGHSFARTSSSGYVASAAALANERTL 225 (233)
T ss_dssp -----GGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTT-CT-TEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHH
T ss_pred -----hhhhhccCCcceeeecccccCCCHHHHHHHHHHHhc-CC-CEEEEEECCCCcCCCCCCCccCCHHHHHHHHHHHH
Confidence 112345689999999999999999998888887764 44 789999999999874 12367788
Q ss_pred HHHHH
Q 025121 244 NWLTA 248 (257)
Q Consensus 244 ~~l~~ 248 (257)
+||..
T Consensus 226 ~ffa~ 230 (233)
T d1dina_ 226 DFLAP 230 (233)
T ss_dssp HHHGG
T ss_pred HHHHc
Confidence 88765
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.88 E-value=2.6e-21 Score=151.32 Aligned_cols=215 Identities=13% Similarity=0.029 Sum_probs=134.4
Q ss_pred CCCceEEeCC-CCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCccccc----------ccC
Q 025121 20 EFGRTHVVRP-KGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAW----------FDV 88 (257)
Q Consensus 20 ~~~~~~~~~~-~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w----------~~~ 88 (257)
.+..+++.+. ...+.|+||++||++.....+.. ...++++||.|+++|.|++|.+...+...... +..
T Consensus 67 ~l~~~l~~P~~~~~~~P~Vv~~hG~~~~~~~~~~-~~~~a~~G~~v~~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~ 145 (322)
T d1vlqa_ 67 RIKGWLLVPKLEEEKLPCVVQYIGYNGGRGFPHD-WLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMT 145 (322)
T ss_dssp EEEEEEEEECCSCSSEEEEEECCCTTCCCCCGGG-GCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCSSSBCCCCSSSTT
T ss_pred EEEEEEEeccCCCCCccEEEEecCCCCCcCcHHH-HHHHHhCCCEEEEeeccccCCCCCCccccccccccccccccchhh
Confidence 3333443333 34567999999998887766644 34556789999999999998765443211100 000
Q ss_pred CCCCCCCCCchh-hHHHHHHHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCC
Q 025121 89 GELSDDGPEDWE-GLDASAAHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWL 166 (257)
Q Consensus 89 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 166 (257)
.+.......... .+.+....+..+.... ....+++++|+|+||.+++.++.. .++++++++..+..
T Consensus 146 ~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~------------~~~~~a~v~~~~~~ 213 (322)
T d1vlqa_ 146 RGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSAL------------SKKAKALLCDVPFL 213 (322)
T ss_dssp TTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHH------------CSSCCEEEEESCCS
T ss_pred hchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHhc------------CCCccEEEEeCCcc
Confidence 000001111111 1223333333333222 223589999999999999988875 56788888776654
Q ss_pred CCchhhhhcc---------------------------ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCc
Q 025121 167 PGSRNLRNKI---------------------------EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGF 219 (257)
Q Consensus 167 ~~~~~~~~~~---------------------------~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~ 219 (257)
.......... ..........+++|+|++||++|.++|++.+..+++++..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~~i~~P~Lv~~G~~D~~vp~~~~~~~~~~~~~--- 290 (322)
T d1vlqa_ 214 CHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNYYAG--- 290 (322)
T ss_dssp CCHHHHHHHCCCTTHHHHHHHHHHCTTCHHHHHHHHHTTCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCCS---
T ss_pred ccHHHHHhhccccchhhHHhhhhcCcchhhhHHHHhhhhhHHHHHhcCCCCEEEEEeCCCCCcCHHHHHHHHHHCCC---
Confidence 3221111100 0112223456889999999999999999998888887753
Q ss_pred eeeEEEEecCCCCccCHHH-HHHHHHHHHHhcC
Q 025121 220 RHLTFKSFEGLGHYTVPKE-MDEVCNWLTARLG 251 (257)
Q Consensus 220 ~~~~~~~~~g~~H~~~~~~-~~~~~~~l~~~l~ 251 (257)
+++++++|+++|....+. .+..++||++.|+
T Consensus 291 -~~~l~~~p~~~H~~~~~~~~~~~~~~l~~~l~ 322 (322)
T d1vlqa_ 291 -PKEIRIYPYNNHEGGGSFQAVEQVKFLKKLFE 322 (322)
T ss_dssp -SEEEEEETTCCTTTTHHHHHHHHHHHHHHHHC
T ss_pred -CeEEEEECCCCCCCccccCHHHHHHHHHHHhC
Confidence 679999999999876443 4567899998874
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=5.4e-22 Score=150.16 Aligned_cols=99 Identities=19% Similarity=0.227 Sum_probs=80.6
Q ss_pred eEEEEEccCCCCccchHHHhhcCCC--CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHH
Q 025121 35 ATIVWLHGLGDNGSSWSQLLESLPL--PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANL 112 (257)
Q Consensus 35 ~~vi~~HG~~~~~~~~~~~~~~l~~--~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (257)
++|||+||++++...|..++..|.+ .+|.|+++|+||+|.+..+ ...++...++++.++
T Consensus 3 ~PvvllHG~~~~~~~~~~~~~~l~~~~~~~~v~~~d~~G~g~S~~~-------------------~~~~~~~~~~~l~~~ 63 (268)
T d1pjaa_ 3 KPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRP-------------------LWEQVQGFREAVVPI 63 (268)
T ss_dssp CCEEEECCTTCCGGGGHHHHHHHHHHSTTCCEEECCSSCSGGGGSC-------------------HHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCCCCCCCCCc-------------------cccCHHHHHHHHHHH
Confidence 4688999999999999999998864 4899999999987654321 245667778888888
Q ss_pred hccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCccc-ccceEEEeccC
Q 025121 113 LSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYV-NLRAVVGLSGW 165 (257)
Q Consensus 113 ~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~ 165 (257)
+++.. ++++|+||||||.+++.+|.++ |+ ++++++++++.
T Consensus 64 l~~l~--~~~~lvGhS~GG~ia~~~a~~~-----------p~~~v~~lvl~~~~ 104 (268)
T d1pjaa_ 64 MAKAP--QGVHLICYSQGGLVCRALLSVM-----------DDHNVDSFISLSSP 104 (268)
T ss_dssp HHHCT--TCEEEEEETHHHHHHHHHHHHC-----------TTCCEEEEEEESCC
T ss_pred HhccC--CeEEEEccccHHHHHHHHHHHC-----------CccccceEEEECCC
Confidence 87764 4999999999999999999964 66 69999988763
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.85 E-value=2e-19 Score=132.62 Aligned_cols=190 Identities=17% Similarity=0.138 Sum_probs=133.2
Q ss_pred eCCCCCCceEEEEEcc---CCCCccc--hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhh
Q 025121 27 VRPKGKHQATIVWLHG---LGDNGSS--WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEG 101 (257)
Q Consensus 27 ~~~~~~~~~~vi~~HG---~~~~~~~--~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 101 (257)
.++.+.+.+++|++|| +|++..+ ...+++.|.+.||.++.+|+|+.|.+ .|. + ......
T Consensus 17 ~~~~~~~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~G~~~lrfn~RG~g~S--~G~-----~---------~~~~~e 80 (218)
T d2i3da1 17 QPSKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRS--QGE-----F---------DHGAGE 80 (218)
T ss_dssp ECCSSTTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTC--CSC-----C---------CSSHHH
T ss_pred eCCCCCCCCEEEEECCCcCcCCcCCcHHHHHHHHHHHhcCeeEEEEecCccCCC--ccc-----c---------ccchhH
Confidence 3445556789999998 4566554 45578888889999999998865432 221 1 111222
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchH
Q 025121 102 LDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHE 181 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 181 (257)
.++....+..+..+.....++.++|+|+||.+++.++.+ .....+++++.+.......
T Consensus 81 ~~d~~aa~~~~~~~~~~~~~~~~~g~S~G~~~a~~~a~~------------~~~~~~~~~~~~~~~~~~~---------- 138 (218)
T d2i3da1 81 LSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMR------------RPEIEGFMSIAPQPNTYDF---------- 138 (218)
T ss_dssp HHHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHH------------CTTEEEEEEESCCTTTSCC----------
T ss_pred HHHHHHHHhhhhcccccccceeEEeeehHHHHHHHHHHh------------hccccceeeccccccccch----------
Confidence 333334443333334334489999999999999999875 3456667777665443221
Q ss_pred HHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC---HHHHHHHHHHHHHhcCcCC
Q 025121 182 AARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV---PKEMDEVCNWLTARLGLEG 254 (257)
Q Consensus 182 ~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~---~~~~~~~~~~l~~~l~~~~ 254 (257)
........|+++++|+.|.+++.+...++.+.++.......++++++|++|++. .+..+.+.+||.+.|....
T Consensus 139 ~~~~~~~~p~l~i~g~~D~~~~~~~~~~l~~~~~~~~~~~~~~~vi~gAdHfF~g~~~~l~~~v~~~l~~~l~~~~ 214 (218)
T d2i3da1 139 SFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFFNGKVDELMGECEDYLDRRLNGEL 214 (218)
T ss_dssp TTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTCTTCHHHHHHHHHHHHHHHHTTCS
T ss_pred hhccccCCCceeeecccceecChHHHHHHHHHHhhccCCCccEEEeCCCCCCCcCCHHHHHHHHHHHHHHhcCCCC
Confidence 112345789999999999999999999999998865322679999999999987 4456889999999887654
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.83 E-value=1.2e-18 Score=132.06 Aligned_cols=193 Identities=14% Similarity=0.138 Sum_probs=119.7
Q ss_pred CCCceEEeCC-CCCCceEEEEEccCC-----CCccchHH----HhhcCCCCceEEEccCCCCCCcccCCCCcccccccCC
Q 025121 20 EFGRTHVVRP-KGKHQATIVWLHGLG-----DNGSSWSQ----LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVG 89 (257)
Q Consensus 20 ~~~~~~~~~~-~~~~~~~vi~~HG~~-----~~~~~~~~----~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~ 89 (257)
.+...+.+.+ +++++|+|||+||.| .+...|.. +++.+.+.|+.|+++|+|..+. .
T Consensus 16 ~~~~~~~~~~~~~~~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~-----~--------- 81 (263)
T d1vkha_ 16 LFNKTLTFQEISQNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPE-----I--------- 81 (263)
T ss_dssp CGGGCEEEECCCTTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTT-----S---------
T ss_pred eecceEEeccCCCCCCcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHhCCeEEEEeccccCcc-----h---------
Confidence 3444444444 457889999999954 22334433 5567778999999999773211 0
Q ss_pred CCCCCCCCchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCC------CCcccccceEEEec
Q 025121 90 ELSDDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNG------IPYYVNLRAVVGLS 163 (257)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~------~~~~~~~~~~i~~~ 163 (257)
.. ...+.+....+..+.+.. ...+++|+|||+||.+++.++........... ......+...+..+
T Consensus 82 ----~~---~~~~~d~~~~~~~l~~~~-~~~~i~l~G~S~Gg~lal~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (263)
T d1vkha_ 82 ----TN---PRNLYDAVSNITRLVKEK-GLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLD 153 (263)
T ss_dssp ----CT---THHHHHHHHHHHHHHHHH-TCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEES
T ss_pred ----hh---hHHHHhhhhhhhcccccc-cccceeeeccCcHHHHHHHHHHhccCcccccccccccccccccccccccccc
Confidence 01 223344444444444333 33499999999999999999875432111000 00012345555555
Q ss_pred cCCCCchhhhh----------cc-------ccc-------hHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCc
Q 025121 164 GWLPGSRNLRN----------KI-------EGS-------HEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGF 219 (257)
Q Consensus 164 ~~~~~~~~~~~----------~~-------~~~-------~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~ 219 (257)
+.......... .+ ... .........+|++++||++|+++|++.+..+++++++.++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~s~~l~~~L~~~g~ 233 (263)
T d1vkha_ 154 GIYSLKELLIEYPEYDCFTRLAFPDGIQMYEEEPSRVMPYVKKALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQL 233 (263)
T ss_dssp CCCCHHHHHHHCGGGHHHHHHHCTTCGGGCCCCHHHHHHHHHHHHHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTC
T ss_pred ccccchhhhhhccccchhhhcccccccccccccccccCccccccccccCCCeeeeecCCCcccCHHHHHHHHHHHHHCCC
Confidence 54332211000 00 000 1122445789999999999999999999999999999988
Q ss_pred eeeEEEEecCCCCccC
Q 025121 220 RHLTFKSFEGLGHYTV 235 (257)
Q Consensus 220 ~~~~~~~~~g~~H~~~ 235 (257)
+++++++++++|...
T Consensus 234 -~~~~~~~~~~~H~~~ 248 (263)
T d1vkha_ 234 -SFKLYLDDLGLHNDV 248 (263)
T ss_dssp -CEEEEEECCCSGGGG
T ss_pred -CEEEEEECCCCchhh
Confidence 899999999999754
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=99.83 E-value=1.8e-20 Score=134.15 Aligned_cols=168 Identities=17% Similarity=0.110 Sum_probs=114.0
Q ss_pred eEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhc
Q 025121 35 ATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLS 114 (257)
Q Consensus 35 ~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (257)
++|||+||++++...|..+++.|.++||.++.++.++++.+ .........+..+.+.++++
T Consensus 3 ~PVv~vHG~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~-------------------~~~~~~~~~~l~~~i~~~~~ 63 (179)
T d1ispa_ 3 NPVVMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDK-------------------TGTNYNNGPVLSRFVQKVLD 63 (179)
T ss_dssp CCEEEECCTTCCGGGGHHHHHHHHHTTCCGGGEEECCCSCT-------------------TCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHcCCeEEEEecCCcccc-------------------ccccchhhhhHHHHHHHHHH
Confidence 45889999999999999999999989999988887643211 11112334444555555555
Q ss_pred cCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhhhcCCCEEEE
Q 025121 115 TEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLT 194 (257)
Q Consensus 115 ~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~ 194 (257)
+... +++.|+||||||.++..++.+. ..+++++.+|.+++...... ...+.. ......+|++.+
T Consensus 64 ~~~~-~~v~lvGHSmGG~va~~~~~~~---------~~~~~V~~~V~l~~p~~g~~--~~~l~~----~~~~~~~~~~~i 127 (179)
T d1ispa_ 64 ETGA-KKVDIVAHSMGGANTLYYIKNL---------DGGNKVANVVTLGGANRLTT--GKALPG----TDPNQKILYTSI 127 (179)
T ss_dssp HHCC-SCEEEEEETHHHHHHHHHHHHS---------SGGGTEEEEEEESCCGGGTC--SBCCCC----SCTTCCCEEEEE
T ss_pred hcCC-ceEEEEeecCcCHHHHHHHHHc---------CCchhhCEEEEECCCCCCch--hhhcCC----cccccCceEEEE
Confidence 4333 3899999999999999999864 23678999999987432111 011111 123457899999
Q ss_pred ccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC---HHHHHHHHHHHH
Q 025121 195 HGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV---PKEMDEVCNWLT 247 (257)
Q Consensus 195 ~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~---~~~~~~~~~~l~ 247 (257)
+|+.|.+|++..+ ++. ..+.+.+++.+|... ++..+.+.+||+
T Consensus 128 ~~~~D~~v~~~~~-----~l~-----~~~~~~~~~~~H~~l~~~~~v~~~i~~~L~ 173 (179)
T d1ispa_ 128 YSSADMIVMNYLS-----RLD-----GARNVQIHGVGHIGLLYSSQVNSLIKEGLN 173 (179)
T ss_dssp EETTCSSSCHHHH-----CCB-----TSEEEEESSCCTGGGGGCHHHHHHHHHHHT
T ss_pred EecCCcccCchhh-----cCC-----CceEEEECCCCchhhccCHHHHHHHHHHHh
Confidence 9999999997543 232 456788899999755 444555555554
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.82 E-value=5.6e-20 Score=139.04 Aligned_cols=176 Identities=16% Similarity=0.064 Sum_probs=117.2
Q ss_pred EeCCCCCCceEEEEEccCC---CCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhH
Q 025121 26 VVRPKGKHQATIVWLHGLG---DNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGL 102 (257)
Q Consensus 26 ~~~~~~~~~~~vi~~HG~~---~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 102 (257)
++.|.+++.|+|||+||.+ ++...|..++..|+++||.|+.+|+|..+. ......+
T Consensus 54 iy~P~~~~~P~vv~iHGG~w~~g~~~~~~~~a~~l~~~G~~Vv~~~YRl~p~---------------------~~~p~~~ 112 (261)
T d2pbla1 54 LFLPEGTPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPE---------------------VRISEIT 112 (261)
T ss_dssp EECCSSSCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTT---------------------SCHHHHH
T ss_pred EeccCCCCCCeEEEECCCCCccCChhHhhhHHHHHhcCCceeeccccccccc---------------------ccCchhH
Confidence 4556677889999999954 455567778888888999999999773211 1112333
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhc----cc-
Q 025121 103 DASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNK----IE- 177 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~----~~- 177 (257)
.+....+..+.++. +.+|+|+|||.||+++..++...... ......+++++.+++........... +.
T Consensus 113 ~d~~~a~~~~~~~~--~~rI~l~G~SaGG~la~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (261)
T d2pbla1 113 QQISQAVTAAAKEI--DGPIVLAGHSAGGHLVARMLDPEVLP-----EAVGARIRNVVPISPLSDLRPLLRTSMNEKFKM 185 (261)
T ss_dssp HHHHHHHHHHHHHS--CSCEEEEEETHHHHHHHHTTCTTTSC-----HHHHTTEEEEEEESCCCCCGGGGGSTTHHHHCC
T ss_pred HHHHHHHHHHHhcc--cCceEEEEcchHHHHHHHHhcCcccc-----cchhhchhhhhccccccccchhhhhhhcccccC
Confidence 44444444433332 34999999999999998776532100 01134578888888876544322211 11
Q ss_pred -------cchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC
Q 025121 178 -------GSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV 235 (257)
Q Consensus 178 -------~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 235 (257)
..+........+|++++||++|..++.++++.+.+.++ ++.+++++.+|+-.
T Consensus 186 ~~~~~~~~SP~~~~~~~~~P~li~~G~~D~~~~~~qs~~~~~~l~------~~~~~~~~~~HF~v 244 (261)
T d2pbla1 186 DADAAIAESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWD------ADHVIAFEKHHFNV 244 (261)
T ss_dssp CHHHHHHTCGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHT------CEEEEETTCCTTTT
T ss_pred CHHHHHHhCchhhcccCCCeEEEEEecCCCchHHHHHHHHHHHhC------CCceEeCCCCchhH
Confidence 11222234567899999999999999999999999885 46788999999643
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=99.81 E-value=1.9e-19 Score=144.53 Aligned_cols=110 Identities=13% Similarity=-0.017 Sum_probs=82.7
Q ss_pred eCCCCCCceEEEEEccCCCCccchHHHhhcCCCCc------eEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchh
Q 025121 27 VRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPN------IKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWE 100 (257)
Q Consensus 27 ~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g------~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~ 100 (257)
....++..++|||+||+.++...|..++..|++.| |+||+||+||+|.+..+. .....
T Consensus 99 ~~~~~~~~~pLlLlHG~P~s~~~w~~vi~~La~~g~~~~~~f~VIaPDLpG~G~S~~P~----------------~~~~y 162 (394)
T d1qo7a_ 99 LFSEREDAVPIALLHGWPGSFVEFYPILQLFREEYTPETLPFHLVVPSLPGYTFSSGPP----------------LDKDF 162 (394)
T ss_dssp ECCSCTTCEEEEEECCSSCCGGGGHHHHHHHHHHCCTTTCCEEEEEECCTTSTTSCCCC----------------SSSCC
T ss_pred EeccCCCCCEEEEeccccccHHHHHHHHHhhccccCCcccceeeecccccccCCCCCCC----------------CCCcc
Confidence 34556667899999999999999999999998665 999999999877654321 11123
Q ss_pred hHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEecc
Q 025121 101 GLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG 164 (257)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 164 (257)
.....+.++..++...... +.+++|||+||.++..++... ++.+.+++++..
T Consensus 163 ~~~~~a~~~~~l~~~lg~~-~~~~vg~~~Gg~v~~~~a~~~-----------p~~~~~~~l~~~ 214 (394)
T d1qo7a_ 163 GLMDNARVVDQLMKDLGFG-SGYIIQGGDIGSFVGRLLGVG-----------FDACKAVHLNLC 214 (394)
T ss_dssp CHHHHHHHHHHHHHHTTCT-TCEEEEECTHHHHHHHHHHHH-----------CTTEEEEEESCC
T ss_pred CHHHHHHHHHHHHhhccCc-ceEEEEecCchhHHHHHHHHh-----------hccccceeEeee
Confidence 4455666666666665444 889999999999999999864 777777766543
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=99.81 E-value=8.8e-20 Score=135.57 Aligned_cols=177 Identities=16% Similarity=0.097 Sum_probs=114.4
Q ss_pred CCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025121 31 GKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
+...++|||+||++++...|..+++.|. +|.|+++|+++++ +...+.++.+.
T Consensus 14 ~~~~~~l~~lhg~~g~~~~~~~la~~L~--~~~v~~~~~~g~~--------------------------~~a~~~~~~i~ 65 (230)
T d1jmkc_ 14 QDQEQIIFAFPPVLGYGLMYQNLSSRLP--SYKLCAFDFIEEE--------------------------DRLDRYADLIQ 65 (230)
T ss_dssp TTCSEEEEEECCTTCCGGGGHHHHHHCT--TEEEEEECCCCST--------------------------THHHHHHHHHH
T ss_pred CCCCCeEEEEcCCCCCHHHHHHHHHHCC--CCEEeccCcCCHH--------------------------HHHHHHHHHHH
Confidence 3456799999999999999999999995 7999999987531 12233344444
Q ss_pred HHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh-------------hhhcc-
Q 025121 111 NLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN-------------LRNKI- 176 (257)
Q Consensus 111 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------------~~~~~- 176 (257)
+. ....+++|+||||||.+|+.+|.+.+. ....+..++.+.++.+.... .....
T Consensus 66 ~~----~~~~~~~lvGhS~GG~vA~~~A~~~~~--------~~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (230)
T d1jmkc_ 66 KL----QPEGPLTLFGYSAGCSLAFEAAKKLEG--------QGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNR 133 (230)
T ss_dssp HH----CCSSCEEEEEETHHHHHHHHHHHHHHH--------TTCCEEEEEEESCCEECCCC--------CCHHHHHHHTT
T ss_pred Hh----CCCCcEEEEeeccChHHHHHHHHhhhh--------hCccceeeecccccCccchhhhhhhhhhhhhhhhhhccc
Confidence 33 233489999999999999999986521 12334444444443221100 00000
Q ss_pred --------------cc----c-----hHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCc
Q 025121 177 --------------EG----S-----HEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHY 233 (257)
Q Consensus 177 --------------~~----~-----~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~ 233 (257)
.. . .......+++|+++++|++|..++.... .+.+... .+++++.++| +|.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~l~i~g~~D~~~~~~~~-~w~~~~~----~~~~~~~i~g-~H~ 207 (230)
T d1jmkc_ 134 DNEALNSEAVKHGLKQKTHAFYSYYVNLISTGQVKADIDLLTSGADFDIPEWLA-SWEEATT----GAYRMKRGFG-THA 207 (230)
T ss_dssp TCSGGGSHHHHHHHHHHHHHHHHHHHHCCCCSCBSSEEEEEECSSCCCCCTTEE-CSGGGBS----SCEEEEECSS-CGG
T ss_pred cccccccHHHHHHHHHHHHHHHHhhhcccccccccCcceeeeecCCcccchhHH-HHHHhcc----CCcEEEEEcC-CCh
Confidence 00 0 0002245689999999999999886433 2222222 1678999996 998
Q ss_pred cC--HHHHHHHHHHHHHhcCcC
Q 025121 234 TV--PKEMDEVCNWLTARLGLE 253 (257)
Q Consensus 234 ~~--~~~~~~~~~~l~~~l~~~ 253 (257)
.+ .+..+++.++|.++|+.+
T Consensus 208 ~ml~~~~~~~va~~I~~~L~~~ 229 (230)
T d1jmkc_ 208 EMLQGETLDRNAGILLEFLNTQ 229 (230)
T ss_dssp GTTSHHHHHHHHHHHHHHHTCB
T ss_pred hhcCCccHHHHHHHHHHHHhhc
Confidence 55 556688899998888754
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.80 E-value=9.2e-19 Score=136.50 Aligned_cols=193 Identities=15% Similarity=0.081 Sum_probs=117.5
Q ss_pred CCCceEEEEEccCC---CCccchHHHhhcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025121 31 GKHQATIVWLHGLG---DNGSSWSQLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 31 ~~~~~~vi~~HG~~---~~~~~~~~~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
..+.|+|||+||.| ++...+..++..++ +.||.|+.+|++..+.. ..+....+..+..
T Consensus 75 ~~~~Pvvv~iHGGG~~~g~~~~~~~~~~~la~~~G~~V~~vdYrl~pe~------------------~~~~~~~d~~~~~ 136 (317)
T d1lzla_ 75 AGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPET------------------TFPGPVNDCYAAL 136 (317)
T ss_dssp CSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTS------------------CTTHHHHHHHHHH
T ss_pred CCCCcEEEEecCcccccccccccchHHHhHHhhcCCccccccccccccc------------------cccccccccccch
Confidence 35678999999964 45555666666665 45999999997742210 1122233444444
Q ss_pred HHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCC-ch--hhh---------
Q 025121 107 AHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPG-SR--NLR--------- 173 (257)
Q Consensus 107 ~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~--~~~--------- 173 (257)
..+.+...+. .+.++|+|+|+|.||++++.++.+..... ... ....+........ .. ...
T Consensus 137 ~~~~~~~~~~g~D~~rI~l~G~SaGg~la~~~~~~~~~~~------~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 209 (317)
T d1lzla_ 137 LYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEG------VVP-VAFQFLEIPELDDRLETVSMTNFVDTPLWH 209 (317)
T ss_dssp HHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHC------SSC-CCEEEEESCCCCTTCCSHHHHHCSSCSSCC
T ss_pred hHHHHHHHHhCCCHHHEEEEEeccccHHHHHHHhhhhhcc------ccc-ccccccccccccccccccccccccccchhh
Confidence 4444444332 23359999999999999999887532111 011 1222222111100 00 000
Q ss_pred -------------h-----------ccccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecC
Q 025121 174 -------------N-----------KIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEG 229 (257)
Q Consensus 174 -------------~-----------~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g 229 (257)
. ...............|+++++|+.|.+ .+++..+++++++.|+ ++++++++|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pp~li~~g~~D~l--~~~~~~~~~~L~~~G~-~v~~~~~~g 286 (317)
T d1lzla_ 210 RPNAILSWKYYLGESYSGPEDPDVSIYAAPSRATDLTGLPPTYLSTMELDPL--RDEGIEYALRLLQAGV-SVELHSFPG 286 (317)
T ss_dssp HHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGGCSCCTTCCCEEEEEETTCTT--HHHHHHHHHHHHHTTC-CEEEEEETT
T ss_pred hhhhHHHHhhhccccccCCCCchhccccCchhhhhccCCCCeEEEECCCCCC--HHHHHHHHHHHHHCCC-CEEEEEECc
Confidence 0 000000001112347999999999965 4678999999999998 899999999
Q ss_pred CCCccC--------HHHHHHHHHHHHHhcC
Q 025121 230 LGHYTV--------PKEMDEVCNWLTARLG 251 (257)
Q Consensus 230 ~~H~~~--------~~~~~~~~~~l~~~l~ 251 (257)
++|.+. .+..+++++||++.|+
T Consensus 287 ~~H~f~~~~~~~~~~~~~~~~~~~l~r~Lr 316 (317)
T d1lzla_ 287 TFHGSALVATAAVSERGAAEALTAIRRGLR 316 (317)
T ss_dssp CCTTGGGSTTSHHHHHHHHHHHHHHHHHTC
T ss_pred CccCCcccCCchHHHHHHHHHHHHHHHHhC
Confidence 999764 2346788999998876
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.77 E-value=5.7e-19 Score=135.39 Aligned_cols=190 Identities=17% Similarity=0.111 Sum_probs=120.6
Q ss_pred CCCceEEEEEccC--CCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025121 31 GKHQATIVWLHGL--GDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 31 ~~~~~~vi~~HG~--~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
+...|+++++||+ +++...|..+++.|. .++.|+++|+||++.+.... ......++++.++.
T Consensus 57 ~~~~~~l~c~~~~~~~g~~~~y~~la~~L~-~~~~V~al~~pG~~~~~~~~---------------~~~~~~s~~~~a~~ 120 (283)
T d2h7xa1 57 AEGRAVLVGCTGTAANGGPHEFLRLSTSFQ-EERDFLAVPLPGYGTGTGTG---------------TALLPADLDTALDA 120 (283)
T ss_dssp -CCCCEEEEECCCCTTCSTTTTHHHHHTTT-TTCCEEEECCTTCCBC---C---------------BCCEESSHHHHHHH
T ss_pred CCCCceEEEeCCCCCCCCHHHHHHHHHhcC-CCceEEEEeCCCCCCCCCCc---------------cccccCCHHHHHHH
Confidence 3556899999995 567778999999997 68999999999764322110 01112345555555
Q ss_pred HHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccc-----------
Q 025121 109 IANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIE----------- 177 (257)
Q Consensus 109 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----------- 177 (257)
+.+.+.......+++|+||||||.+++.+|.+... .....+.+++++.++.+..........
T Consensus 121 ~~~~i~~~~~~~P~vL~GhS~GG~vA~e~A~~l~~-------~~g~~v~~LvL~d~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (283)
T d2h7xa1 121 QARAILRAAGDAPVVLLGHSGGALLAHELAFRLER-------AHGAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGE 193 (283)
T ss_dssp HHHHHHHHHTTSCEEEEEETHHHHHHHHHHHHHHH-------HHSCCCSEEEEESCCCTTCCHHHHHTHHHHHHHHHHTC
T ss_pred HHHHHHHhcCCCceEEEEeccchHHHHHHHHhhHH-------HcCCCceEEEEecCCccccccchhhhhhhhHHHhhccc
Confidence 54444333233489999999999999999986421 114578899998876543321111100
Q ss_pred --c---------------chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC-HHHH
Q 025121 178 --G---------------SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-PKEM 239 (257)
Q Consensus 178 --~---------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-~~~~ 239 (257)
. .........++|+++++|++|..++.+....+.+.+.. .++++.++| +|+.+ .+..
T Consensus 194 ~~~~~~~~l~a~~~~~~~~~~~~~~~~~~Pvl~i~g~~d~~~~~~~~~~w~~~~~~----~~~~~~v~G-~H~~ml~e~~ 268 (283)
T d2h7xa1 194 LEPMSDARLLAMGRYARFLAGPRPGRSSAPVLLVRASEPLGDWQEERGDWRAHWDL----PHTVADVPG-DHFTMMRDHA 268 (283)
T ss_dssp SSCCCHHHHHHHHHHHHHHHSCCCCCCCSCEEEEEESSCSSCCCGGGCCCSCCCSS----CSEEEEESS-CTTHHHHTTH
T ss_pred ccccccHHHHHHHHHHHHHhhccccccCCCeEEEEeCCCCCCCHHHHHHHHHhCCC----CcEEEEEcC-CCcccccCCH
Confidence 0 00011235689999999999999988776555444432 468999997 88754 3434
Q ss_pred H----HHHHHHHH
Q 025121 240 D----EVCNWLTA 248 (257)
Q Consensus 240 ~----~~~~~l~~ 248 (257)
+ .|.+||.+
T Consensus 269 ~~vA~~i~~~L~~ 281 (283)
T d2h7xa1 269 PAVAEAVLSWLDA 281 (283)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 4 44555543
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=99.76 E-value=4.7e-18 Score=131.86 Aligned_cols=192 Identities=15% Similarity=0.105 Sum_probs=114.5
Q ss_pred CCCceEEEEEccCC---CCccchHHHhhcCCCC-ceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025121 31 GKHQATIVWLHGLG---DNGSSWSQLLESLPLP-NIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 31 ~~~~~~vi~~HG~~---~~~~~~~~~~~~l~~~-g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
.++.|+||++||.+ ++...+..++..++.. ++.|+.+|++..+. ...+...++..+.+
T Consensus 69 ~~~~Pvvv~iHGGg~~~g~~~~~~~~~~~~a~~~~~~v~~v~Yrl~p~------------------~~~p~~~~D~~~~~ 130 (308)
T d1u4na_ 69 EPPYPALVYYHGGGWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPE------------------HKFPAAVEDAYDAL 130 (308)
T ss_dssp CSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTT------------------SCTTHHHHHHHHHH
T ss_pred CCCCCEEEEEecCeeeeeccccccchhhhhhhcccccccccccccccc------------------cccccccchhhhhh
Confidence 45679999999965 4555666666666643 56788888663211 01111223333333
Q ss_pred HHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhh-----h------
Q 025121 107 AHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLR-----N------ 174 (257)
Q Consensus 107 ~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-----~------ 174 (257)
..+.+...+.. +.++|+++|+|.||++++.++...... ....+.+..++++......... .
T Consensus 131 ~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (308)
T d1u4na_ 131 QWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKER-------GGPALAFQLLIYPSTGYDPAHPPASIEENAEGYL 203 (308)
T ss_dssp HHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHH-------TCCCCCCEEEESCCCCCCTTSCCHHHHHTSSSSS
T ss_pred hHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhhc-------cCCCcccccccccccccccccccchhhhcccccc
Confidence 33333333222 235899999999999999887753211 0123344444443321110000 0
Q ss_pred ------------ccccch---------HHHh-hhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCC
Q 025121 175 ------------KIEGSH---------EAAR-RAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGH 232 (257)
Q Consensus 175 ------------~~~~~~---------~~~~-~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H 232 (257)
...... .... .....|+++++|+.|.++ +.+..++++|++.|+ ++++++++|.+|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~d~~~~Pp~li~~g~~D~l~--~~~~~~~~~L~~~G~-~v~~~~~~g~~H 280 (308)
T d1u4na_ 204 LTGGMSLWFLDQYLNSLEELTHPWFSPVLYPDLSGLPPAYIATAQYDPLR--DVGKLYAEALNKAGV-KVEIENFEDLIH 280 (308)
T ss_dssp SCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCCTTCCCEEEEEEEECTTH--HHHHHHHHHHHHTTC-CEEEEEEEEEET
T ss_pred ccchhhhhhhhcccCccccccchhhhhhhchhhcCCCCeeEEecCcCCch--HHHHHHHHHHHHCCC-CEEEEEECCCCE
Confidence 000000 0000 112358999999999765 467899999999998 899999999999
Q ss_pred ccC---------HHHHHHHHHHHHHhc
Q 025121 233 YTV---------PKEMDEVCNWLTARL 250 (257)
Q Consensus 233 ~~~---------~~~~~~~~~~l~~~l 250 (257)
.+. .+..+.+.+||++.|
T Consensus 281 gf~~~~~~~~~a~~~~~~~~~fl~~~L 307 (308)
T d1u4na_ 281 GFAQFYSLSPGATKALVRIAEKLRDAL 307 (308)
T ss_dssp TGGGGTTTSHHHHHHHHHHHHHHHHHH
T ss_pred eCcccCCCCHHHHHHHHHHHHHHHHhh
Confidence 753 235678888988766
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.76 E-value=4.3e-18 Score=132.20 Aligned_cols=176 Identities=16% Similarity=0.084 Sum_probs=111.4
Q ss_pred CCceEEEEEccCC---CCccchHHHhhcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025121 32 KHQATIVWLHGLG---DNGSSWSQLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 32 ~~~~~vi~~HG~~---~~~~~~~~~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
++.|+||++||.| ++...+..++..++ ..|+.|+.+|+|..+ + ...+....+....+.
T Consensus 77 ~~~P~il~iHGGg~~~g~~~~~~~~~~~l~~~~g~~Vv~v~Yrlap-----~-------------~~~p~~~~d~~~a~~ 138 (311)
T d1jjia_ 77 PDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAP-----E-------------HKFPAAVYDCYDATK 138 (311)
T ss_dssp SSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTT-----T-------------SCTTHHHHHHHHHHH
T ss_pred CCceEEEEEcCCCCccCChhhhhhhhhhhhhcCCcEEEEecccccc-----c-------------cccchhhhhhhhhhh
Confidence 3568999999975 44555666666664 459999999977321 1 111222334444444
Q ss_pred HHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc----------
Q 025121 108 HIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI---------- 176 (257)
Q Consensus 108 ~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---------- 176 (257)
++.+..++. .+.++|+|+|+|.||++++.++..... .......+.+++++++..........
T Consensus 139 ~~~~~~~~~~~d~~ri~v~G~SaGG~la~~~~~~~~~-------~~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~ 211 (311)
T d1jjia_ 139 WVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARD-------SGEDFIKHQILIYPVVNFVAPTPSLLEFGEGLWILD 211 (311)
T ss_dssp HHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHH-------TTCCCEEEEEEESCCCCSSSCCHHHHHTSSSCSSCC
T ss_pred HHHHhHHHhCcChhHEEEEeeecCCcceeechhhhhh-------ccccccceeeeecceeeeccCccccccccccccccc
Confidence 444444332 223599999999999999888765321 11345566777777654321100000
Q ss_pred ---------------------ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC
Q 025121 177 ---------------------EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV 235 (257)
Q Consensus 177 ---------------------~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~ 235 (257)
...+.........|+++++|+.|.+++ .+..+++++++.|+ ++++++++|.+|.+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~g~~D~l~d--~~~~~~~~L~~~Gv-~v~~~~~~g~~H~F~ 288 (311)
T d1jjia_ 212 QKIMSWFSEQYFSREEDKFNPLASVIFADLENLPPALIITAEYDPLRD--EGEVFGQMLRRAGV-EASIVRYRGVLHGFI 288 (311)
T ss_dssp HHHHHHHHHHHCSSGGGGGCTTTSGGGSCCTTCCCEEEEEEEECTTHH--HHHHHHHHHHHTTC-CEEEEEEEEEETTGG
T ss_pred HHHhhhhhhhcccccccccccccchhhcccccCCCEEEEEcCCCCChH--HHHHHHHHHHHCCC-CEEEEEECCCCCccc
Confidence 001111112234689999999997654 67889999999999 899999999999754
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.75 E-value=1.8e-18 Score=131.65 Aligned_cols=91 Identities=13% Similarity=0.138 Sum_probs=63.8
Q ss_pred eEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHH
Q 025121 24 THVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLD 103 (257)
Q Consensus 24 ~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 103 (257)
.....+....+++|||+||++++...|..+++.| ++.|+++|.||+|.+. .+.
T Consensus 15 l~~l~~~~~~~~Pl~l~Hg~~gs~~~~~~l~~~L---~~~v~~~d~~g~~~~~------------------------~~~ 67 (286)
T d1xkta_ 15 LMRLNSVQSSERPLFLVHPIEGSTTVFHSLASRL---SIPTYGLQCTRAAPLD------------------------SIH 67 (286)
T ss_dssp EEECCCCCCCSCCEEEECCTTCCCGGGHHHHHTC---SSCEEEECCCTTSCCS------------------------CHH
T ss_pred EEEecCCCCCCCeEEEECCCCccHHHHHHHHHHc---CCeEEEEeCCCCCCCC------------------------CHH
Confidence 3344455555567999999999999999999998 4779999999653211 122
Q ss_pred HHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhc
Q 025121 104 ASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
+.+.++...+.......+++|+||||||.+|+.+|.+.
T Consensus 68 ~~a~~~~~~~~~~~~~~~~~lvGhS~Gg~vA~~~A~~~ 105 (286)
T d1xkta_ 68 SLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQL 105 (286)
T ss_dssp HHHHHHHHHHHHHCCSSCCEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCceEEeecCCccHHHHHHHHHH
Confidence 23333333333322334999999999999999999965
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.75 E-value=6.1e-17 Score=122.12 Aligned_cols=116 Identities=14% Similarity=0.118 Sum_probs=86.9
Q ss_pred CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhhhcCCCEEEEcc
Q 025121 117 PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHG 196 (257)
Q Consensus 117 ~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~G 196 (257)
...++++++|+|+||..++.++.+ +|+.+++++++|+........... ............|+++.+|
T Consensus 132 ~d~~~i~i~G~S~GG~~a~~~a~~-----------~Pd~F~~v~~~sg~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~G 198 (255)
T d1jjfa_ 132 TDREHRAIAGLSMGGGQSFNIGLT-----------NLDKFAYIGPISAAPNTYPNERLF--PDGGKAAREKLKLLFIACG 198 (255)
T ss_dssp CSGGGEEEEEETHHHHHHHHHHHT-----------CTTTCSEEEEESCCTTSCCHHHHC--TTTTHHHHHHCSEEEEEEE
T ss_pred cccceeEeeeccchhHHHHHHHHh-----------CCCcccEEEEEccCcCCccccccc--ccHHHHhhccCCcceEEeC
Confidence 334689999999999999999995 499999999999876543322111 1122334556789999999
Q ss_pred CCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC--HHHHHHHHHHHHH
Q 025121 197 LCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV--PKEMDEVCNWLTA 248 (257)
Q Consensus 197 ~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~~ 248 (257)
++|..++. .+++.+.|+++++ ++++.++++++|.+. .+.+...+.|+.+
T Consensus 199 ~~D~~~~~--~~~~~~~L~~~g~-~~~~~~~~~ggH~~~~W~~~l~~fl~~~~~ 249 (255)
T d1jjfa_ 199 TNDSLIGF--GQRVHEYCVANNI-NHVYWLIQGGGHDFNVWKPGLWNFLQMADE 249 (255)
T ss_dssp TTCTTHHH--HHHHHHHHHHTTC-CCEEEEETTCCSSHHHHHHHHHHHHHHHHH
T ss_pred CCCCCchH--HHHHHHHHHHCCC-CEEEEEECCCCcCHHHHHHHHHHHHHHHHh
Confidence 99998774 6789999999998 899999999999864 3444445544444
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.72 E-value=6.5e-17 Score=127.83 Aligned_cols=193 Identities=15% Similarity=0.086 Sum_probs=117.4
Q ss_pred CCCceEEEEEccCCCC---cc--chHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025121 31 GKHQATIVWLHGLGDN---GS--SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~~---~~--~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
..+.|+|||+||.|.. .. .+..+++.++..|+.|+.+|+|.-+.. ...... ...+.+.
T Consensus 103 ~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~VvsvdYRla~~~--------------~pe~~~---p~~l~D~ 165 (358)
T d1jkma_ 103 EGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTA--------------EGHHPF---PSGVEDC 165 (358)
T ss_dssp CSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEET--------------TEECCT---THHHHHH
T ss_pred CCCCCeEEEecCCeeeeccccccccchHHHHHHhhhheeeeeeecccccc--------------cccCCC---chhhHHH
Confidence 4567899999997542 22 245677888788999999997742100 000111 2234444
Q ss_pred HHHHHHHhcc--CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhc--------
Q 025121 106 AAHIANLLST--EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNK-------- 175 (257)
Q Consensus 106 ~~~~~~~~~~--~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-------- 175 (257)
...+..+.+. ..+.++|+|+|.|.||++++.++.+.... .....+.++++..+++.........
T Consensus 166 ~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~------~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 239 (358)
T d1jkma_ 166 LAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRR------GRLDAIDGVYASIPYISGGYAWDHERRLTELPS 239 (358)
T ss_dssp HHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHT------TCGGGCSEEEEESCCCCCCTTSCHHHHHHHCTH
T ss_pred HHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhc------CCCccccccccccceeccccCccchhhcccccc
Confidence 4444333322 12335999999999999998877642110 1234567777777654322100000
Q ss_pred --------------------c-cc-----ch-------HHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceee
Q 025121 176 --------------------I-EG-----SH-------EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHL 222 (257)
Q Consensus 176 --------------------~-~~-----~~-------~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~ 222 (257)
+ .. .+ .......-.|+++++|+.|.+. +.+..++++|+++|+ ++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~a~~~~~~~lPp~li~~g~~D~l~--~e~~~~~~~L~~aGv-~v 316 (358)
T d1jkma_ 240 LVENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLPPFVVAVNELDPLR--DEGIAFARRLARAGV-DV 316 (358)
T ss_dssp HHHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCCCEEEEEETTCTTH--HHHHHHHHHHHHTTC-CE
T ss_pred hhcccccccchhhhhhHHhhcCCccCCccCccccccccchhhccCCCCEEEEECCCCCCH--HHHHHHHHHHHHCCC-cE
Confidence 0 00 00 0001122359999999999764 567899999999999 89
Q ss_pred EEEEecCCCCccC-------HH----HHHHHHHHHHHh
Q 025121 223 TFKSFEGLGHYTV-------PK----EMDEVCNWLTAR 249 (257)
Q Consensus 223 ~~~~~~g~~H~~~-------~~----~~~~~~~~l~~~ 249 (257)
++++++|.+|.+. ++ ..+.+..|+.+.
T Consensus 317 ~~~~~~g~~Hgf~~~~~~~~~~~~~~~~~~i~~Fl~~~ 354 (358)
T d1jkma_ 317 AARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADR 354 (358)
T ss_dssp EEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCccchhhhccccCCHHHHHHHHHHHHHHHHH
Confidence 9999999999652 12 345667777654
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.70 E-value=1.4e-19 Score=140.77 Aligned_cols=192 Identities=15% Similarity=0.092 Sum_probs=111.4
Q ss_pred CCCCCceEEEEEccCCCCccchHH-------HhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhh
Q 025121 29 PKGKHQATIVWLHGLGDNGSSWSQ-------LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEG 101 (257)
Q Consensus 29 ~~~~~~~~vi~~HG~~~~~~~~~~-------~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 101 (257)
|.++.+++|||+||++.+...|.. ++..+.++||.|+++|+||+|.+.... ....
T Consensus 53 p~~~~~~PvvllHG~~~~~~~w~~~~~~~~~~~~~~~~~Gy~V~~~D~~G~G~S~~~~------------------~~~~ 114 (318)
T d1qlwa_ 53 PQRAKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDI------------------SAIN 114 (318)
T ss_dssp ETTCCSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCC------------------HHHH
T ss_pred CCCCCCCcEEEECCCCCCcCccccCcccchhHHHHHHhCCCEEEEecCCCCCCCCCcc------------------ccCC
Confidence 334445568889999999988854 456667799999999999886543211 1112
Q ss_pred HHHHHHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccC---------CCC-----C-----------------
Q 025121 102 LDASAAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGR---------YGN-----G----------------- 149 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~---------~~~-----~----------------- 149 (257)
......++.+.+.... ...++.++|||+||.++..++....... .+. .
T Consensus 115 ~~~~~~~~~~~l~~~~~~~~~~~~~g~s~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (318)
T d1qlwa_ 115 AVKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKLD 194 (318)
T ss_dssp HHHTTSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhhcccccccccccchhHHHHHHhhhcCccccceeeEeccccccccchhhhhhhHHHHHHHHhhhc
Confidence 2222222333333221 1236778899999887666554210000 000 0
Q ss_pred ------------------CCcccccceEEEeccCCCCchhhhhccccchHHHhhhcCCCEEEEccCCCCcccc-----hh
Q 025121 150 ------------------IPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPY-----KY 206 (257)
Q Consensus 150 ------------------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~-----~~ 206 (257)
...+..+++++.+.+.. ...........++|+|+++|++|.++|. ..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~P~Lii~G~~D~~~p~~~~~~~~ 264 (318)
T d1qlwa_ 195 GTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGE----------CPKPEDVKPLTSIPVLVVFGDHIEEFPRWAPRLKA 264 (318)
T ss_dssp SEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSC----------CCCGGGCGGGTTSCEEEEECSSCTTCTTTHHHHHH
T ss_pred cccchhhhcccchhhhhhhhhhhHHHHHHhhhccc----------ccchhhhhhhccCCEEEEecCcCcccChhhhHHHH
Confidence 00001111111110000 0112233456789999999999999985 34
Q ss_pred hHHHHHHhhhcCceeeEEEEec-----CCCCccCHH-----HHHHHHHHHHHh
Q 025121 207 GEKSANCLSISGFRHLTFKSFE-----GLGHYTVPK-----EMDEVCNWLTAR 249 (257)
Q Consensus 207 ~~~~~~~l~~~~~~~~~~~~~~-----g~~H~~~~~-----~~~~~~~~l~~~ 249 (257)
++.+.+.+++++. +++++.+| |.||.++.| ..+.|.+||++.
T Consensus 265 ~~~~~~~l~~~g~-~~~~~~lp~~gi~G~gH~~~~e~~~~~va~~i~~wL~~~ 316 (318)
T d1qlwa_ 265 CHAFIDALNAAGG-KGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRN 316 (318)
T ss_dssp HHHHHHHHHHTTC-CEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCC-CcEEEEecccccCCCcCccccCcCHHHHHHHHHHHHHhc
Confidence 5667888888887 88999876 567998633 346677777664
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.70 E-value=3.8e-16 Score=119.85 Aligned_cols=205 Identities=16% Similarity=0.132 Sum_probs=128.8
Q ss_pred CCCCceEEEEEccCCCCc--cchHH---HhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025121 30 KGKHQATIVWLHGLGDNG--SSWSQ---LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 30 ~~~~~~~vi~~HG~~~~~--~~~~~---~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
...+.|+|+++||.++.. ..|.. +.+.+.+.++.+++++....+... .|+..... ............
T Consensus 30 p~~~~Pvl~llhG~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-------~~~~~~~~-~~~~~~~~~~~~ 101 (288)
T d1sfra_ 30 GGANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYS-------DWYQPACG-KAGCQTYKWETF 101 (288)
T ss_dssp CSTTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTC-------BCSSCEEE-TTEEECCBHHHH
T ss_pred CCCCceEEEEcCCCCCCCcchhhhhhccHHHHHHhCCCEEEEeccCCCCCCc-------cccCcccc-cccccchhHHHH
Confidence 356789999999987643 34433 455666789999999865322111 11110000 000000111222
Q ss_pred HHHHHHHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc------
Q 025121 105 SAAHIANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI------ 176 (257)
Q Consensus 105 ~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~------ 176 (257)
.++.+..++++. ...++++++|+||||+.|+.++.++ |+.++++++++|.+..........
T Consensus 102 ~~~el~~~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~-----------pd~f~av~~~Sg~~~~~~~~~~~~~~~~~~ 170 (288)
T d1sfra_ 102 LTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYH-----------PQQFVYAGAMSGLLDPSQAMGPTLIGLAMG 170 (288)
T ss_dssp HHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHC-----------TTTEEEEEEESCCSCTTSTTHHHHHHHHHH
T ss_pred HHHHhHHHHHHhcCCCCCceEEEEEccHHHHHHHHHHhc-----------cccccEEEEecCcccccccccchhhhhhhh
Confidence 344444444332 2345899999999999999999965 999999999998765332111000
Q ss_pred -----------------------ccchHHHhhhcCCCEEEEccCCCCcccc--------------hhhHHHHHHhhhcCc
Q 025121 177 -----------------------EGSHEAARRAASLPILLTHGLCDDVVPY--------------KYGEKSANCLSISGF 219 (257)
Q Consensus 177 -----------------------~~~~~~~~~~~~~P~l~~~G~~D~~v~~--------------~~~~~~~~~l~~~~~ 219 (257)
.............++++.+|+.|..++. +.++.+.+.+.+.++
T Consensus 171 ~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~d~~~~~~~~~~~~~~e~~~~~~~~~l~~~l~~~g~ 250 (288)
T d1sfra_ 171 DAGGYKASDMWGPKEDPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPAKFLEGFVRTSNIKFQDAYNAGGG 250 (288)
T ss_dssp HTTSCCHHHHHCSTTSTHHHHSCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hcccccHhhhcCCcchhhhHhcCHHHHHHHhhhcCCeEEEEeCCCCCCCccccccccchhHHHHHHHHHHHHHHHHHCCC
Confidence 0000112233467899999999987663 456789999999988
Q ss_pred eeeEEEEecC-CCCccC--HHHHHHHHHHHHHhcCcCC
Q 025121 220 RHLTFKSFEG-LGHYTV--PKEMDEVCNWLTARLGLEG 254 (257)
Q Consensus 220 ~~~~~~~~~g-~~H~~~--~~~~~~~~~~l~~~l~~~~ 254 (257)
+.++.++++ ++|.+. .+.+.+.+.||.+.|+..+
T Consensus 251 -~~~~~~~~~~G~H~w~~w~~~l~~~l~~l~~alg~~~ 287 (288)
T d1sfra_ 251 -HNGVFDFPDSGTHSWEYWGAQLNAMKPDLQRALGATP 287 (288)
T ss_dssp -CSEEEECCSCCCSSHHHHHHHHHHTHHHHHHHHTCCC
T ss_pred -CeEEEEECCCCccChhHHHHHHHHHHHHHHHhcCCCC
Confidence 677777775 469864 5667888899999888654
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.69 E-value=6.4e-16 Score=117.69 Aligned_cols=216 Identities=13% Similarity=-0.001 Sum_probs=124.0
Q ss_pred cCCCCCceEEeCCC---CCCceEEEEEccCCCCccc--h-HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCC
Q 025121 17 RTFEFGRTHVVRPK---GKHQATIVWLHGLGDNGSS--W-SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGE 90 (257)
Q Consensus 17 ~~~~~~~~~~~~~~---~~~~~~vi~~HG~~~~~~~--~-~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~ 90 (257)
++.++..+++.++. +++.|+||++||.++.... + ......+...++.++..+..+.... ..+.....
T Consensus 16 DG~~i~~~l~~P~~~~~~~~~P~iv~~HGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 88 (280)
T d1qfma2 16 DGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEY-------GETWHKGG 88 (280)
T ss_dssp TSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTT-------HHHHHHTT
T ss_pred CCCEEEEEEEEcCCCCCCCCeEEEEEECCCCcccCCCCcchhhhhhhcccceeeecccccccccc-------chhhhhcc
Confidence 45666666665553 4567999999996443222 1 2222222334566666654321100 00000000
Q ss_pred CCCCCCCchhhHHHHHHHHHHHhcc-CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc
Q 025121 91 LSDDGPEDWEGLDASAAHIANLLST-EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS 169 (257)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 169 (257)
...................... ......++++|.|.||..+...+... +..+++++...+.....
T Consensus 89 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gg~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~ 154 (280)
T d1qfma2 89 ---ILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQR-----------PDLFGCVIAQVGVMDML 154 (280)
T ss_dssp ---SGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHC-----------GGGCSEEEEESCCCCTT
T ss_pred ---cccccccccchhhhhhhhhhhhcccccccccccccccccchhhhhhhcc-----------cchhhheeeeccccchh
Confidence 0001111222222222222222 23345889999999999999988853 66777777776654332
Q ss_pred hhhhhcc----------ccc-----------------hHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhc-----
Q 025121 170 RNLRNKI----------EGS-----------------HEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSIS----- 217 (257)
Q Consensus 170 ~~~~~~~----------~~~-----------------~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~----- 217 (257)
....... ... ..........|+|++||++|..||+.++.+++++|++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~pP~LiihG~~D~~Vp~~~s~~l~~aL~~~g~~~~ 234 (280)
T d1qfma2 155 KFHKYTIGHAWTTDYGCSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSR 234 (280)
T ss_dssp TGGGSTTGGGGHHHHCCTTSHHHHHHHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTST
T ss_pred hhccccccccceecccCCCcccccccccccccccccchhhhcccCCCceEEeecccCCCCCHHHHHHHHHHHHHhhhhhh
Confidence 2111100 000 00011223448999999999999999999999999654
Q ss_pred --CceeeEEEEecCCCCccC------HHHHHHHHHHHHHhcCcCC
Q 025121 218 --GFRHLTFKSFEGLGHYTV------PKEMDEVCNWLTARLGLEG 254 (257)
Q Consensus 218 --~~~~~~~~~~~g~~H~~~------~~~~~~~~~~l~~~l~~~~ 254 (257)
++ ++++++++|+||.+. .+...++.+||.+.|+.+.
T Consensus 235 ~~~~-~~~l~~~~~~gHgf~~~~~~~~~~~~~~~~fl~k~L~~~~ 278 (280)
T d1qfma2 235 KQNN-PLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNIDW 278 (280)
T ss_dssp TCCS-CEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred cCCC-cEEEEEeCcCCCCCCCcHHHHHHHHHHHHHHHHHhcCCCC
Confidence 44 689999999999874 1234578899999998754
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.64 E-value=9.3e-15 Score=111.83 Aligned_cols=210 Identities=15% Similarity=0.087 Sum_probs=125.4
Q ss_pred CCceEEEEEccCCCCccchHHHh---hcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCC----------CCc
Q 025121 32 KHQATIVWLHGLGDNGSSWSQLL---ESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDG----------PED 98 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~~~~~~---~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~----------~~~ 98 (257)
++.|+|+++||.+++...|.... +...+.+..++.++..........+. ..|++.+...... ...
T Consensus 47 ~~yPVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~vv~~~~~p~~~~~~~~~--~~~~~~g~~~~~y~d~~~~p~~~~~~ 124 (299)
T d1pv1a_ 47 KRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDP--EGSWDFGQGAGFYLNATQEPYAQHYQ 124 (299)
T ss_dssp TTBCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEECCSSCCSTTSCCCT--TCCSSSSSSCCTTCBCCSHHHHTTCB
T ss_pred CCCCEEEEcCCCCCCHHHHHHhhhHHHHHHHcCCceecCCCcccccccCCcc--cccccccCCCccccccccCCcccccc
Confidence 35799999999999988885422 23334578888887543322222111 1111111111000 001
Q ss_pred hhh--HHHHHHHHHHHhccCCC-----CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh
Q 025121 99 WEG--LDASAAHIANLLSTEPA-----DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN 171 (257)
Q Consensus 99 ~~~--~~~~~~~~~~~~~~~~~-----~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 171 (257)
.++ ..+....+.+....... .++.+|.|+||||+.|+.++.+. ..|..+.+++++++.......
T Consensus 125 ~~~~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al~~---------~~p~~f~~~~s~s~~~~~~~~ 195 (299)
T d1pv1a_ 125 MYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKG---------YSGKRYKSCSAFAPIVNPSNV 195 (299)
T ss_dssp HHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHHHT---------GGGTCCSEEEEESCCCCSTTS
T ss_pred hHHHHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHHHh---------cCCCceEEEeeccCcCCcccc
Confidence 111 22333444444432221 14799999999999999999853 247889999999986543211
Q ss_pred hhh--------------ccccchHHH----hhhcCCCEEEEccCCCCcccch-hhHHHHHHhhhcCce-eeEEEEecCCC
Q 025121 172 LRN--------------KIEGSHEAA----RRAASLPILLTHGLCDDVVPYK-YGEKSANCLSISGFR-HLTFKSFEGLG 231 (257)
Q Consensus 172 ~~~--------------~~~~~~~~~----~~~~~~P~l~~~G~~D~~v~~~-~~~~~~~~l~~~~~~-~~~~~~~~g~~ 231 (257)
... ......... ......++++.+|++|...+.. ..+.+.+.+++.+.+ .+++...+|.+
T Consensus 196 ~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~G~~D~~~~~~~~~~~f~~~~~~~g~~~~~~~~~~~G~~ 275 (299)
T d1pv1a_ 196 PWGQKAFKGYLGEEKAQWEAYDPCLLIKNIRHVGDDRILIHVGDSDPFLEEHLKPELLLEAVKATSWQDYVEIKKVHGFD 275 (299)
T ss_dssp HHHHHHHHHHSCC----CGGGCHHHHGGGSCCCTTCCEEEECCTTCTTTTTTCCTHHHHHHHTTSTTTTSEEEECCTTCC
T ss_pred cchhhhhhhhcccchhhhhhcCHHHHHHHhhccCCcceeEecCCCCcchhhhhcHHHHHHHHHhcCCCcceEEEecCCCC
Confidence 000 000011111 1123457889999999987654 357888888887762 36788889888
Q ss_pred Ccc--CHHHHHHHHHHHHHhcCc
Q 025121 232 HYT--VPKEMDEVCNWLTARLGL 252 (257)
Q Consensus 232 H~~--~~~~~~~~~~~l~~~l~~ 252 (257)
|.. ....+.+.++|+.+.|+.
T Consensus 276 Hsw~yW~~~i~~~l~f~a~~lgl 298 (299)
T d1pv1a_ 276 HSYYFVSTFVPEHAEFHARNLGL 298 (299)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHHHHHHhcCC
Confidence 985 477788889999998864
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=99.62 E-value=2.3e-14 Score=111.61 Aligned_cols=205 Identities=17% Similarity=0.091 Sum_probs=130.0
Q ss_pred CCCCceEEEEEccCCCCccc---------hHHHh---hcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCC
Q 025121 30 KGKHQATIVWLHGLGDNGSS---------WSQLL---ESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPE 97 (257)
Q Consensus 30 ~~~~~~~vi~~HG~~~~~~~---------~~~~~---~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~ 97 (257)
.....++||+.|++.++... |..++ +.|....|-||++|..|.+.+..+-..... . .+......-
T Consensus 35 n~~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n~lG~~~gSs~p~s~~p-~--tg~~~g~~F 111 (357)
T d2b61a1 35 NDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINP-Q--TGKPYGSQF 111 (357)
T ss_dssp CTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCT-T--TSSBCGGGC
T ss_pred CCCCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCCCceEEEEecccCCccccCCcCCCCC-C--CCCCCCccc
Confidence 33455799999999887654 33332 345457899999999886544322110000 0 000000112
Q ss_pred chhhHHHHHHHHHHHhccCCCCceE-EEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc-------
Q 025121 98 DWEGLDASAAHIANLLSTEPADVKV-GIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS------- 169 (257)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~i-~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------- 169 (257)
+..++.+.+..-..++++.... ++ .++|.||||..|+.++.+ ||+.+..+|.+++.....
T Consensus 112 P~iti~D~v~aq~~Ll~~LGI~-~l~~viG~SmGGmqAl~wa~~-----------~Pd~v~~~i~i~~~a~~s~~~~~~~ 179 (357)
T d2b61a1 112 PNIVVQDIVKVQKALLEHLGIS-HLKAIIGGSFGGMQANQWAID-----------YPDFMDNIVNLCSSIYFSAEAIGFN 179 (357)
T ss_dssp CCCCHHHHHHHHHHHHHHTTCC-CEEEEEEETHHHHHHHHHHHH-----------STTSEEEEEEESCCSSCCHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHhCcc-eEEEEecccHHHHHHHHHHHh-----------hhHHHhhhcccccccccchhHHHHH
Confidence 2345666677667777766555 65 788999999999999995 599999998887631000
Q ss_pred -------------------------h-----------------hhhhcc-------------------------------
Q 025121 170 -------------------------R-----------------NLRNKI------------------------------- 176 (257)
Q Consensus 170 -------------------------~-----------------~~~~~~------------------------------- 176 (257)
. .+.+.+
T Consensus 180 ~~~~~aI~~Dp~~~~G~Y~~~~~p~~GL~~Ar~~a~~ty~s~~~~~~~f~r~~~~~~~~~~~~~~vesyL~~~g~kf~~r 259 (357)
T d2b61a1 180 HVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKKFLER 259 (357)
T ss_dssp HHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCCCCCCcccCCCchhHHHHHHHHHHhhccCHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHhh
Confidence 0 000000
Q ss_pred ---------------------ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCC-CCcc
Q 025121 177 ---------------------EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGL-GHYT 234 (257)
Q Consensus 177 ---------------------~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~-~H~~ 234 (257)
..........+++|+|++..+.|.++|++..+.+++.++..+. ++++++++.. ||..
T Consensus 260 fDan~yl~l~~a~~~~D~~~~~~~l~~aL~~I~a~vLvi~~~sD~lFpp~~~~~~a~~l~~~~~-~v~~~~I~S~~GHda 338 (357)
T d2b61a1 260 FDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGV-DLHFYEFPSDYGHDA 338 (357)
T ss_dssp CCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTC-EEEEEEECCTTGGGH
T ss_pred CCHHHHHHHHHHhhhcccccccccHHHHHhhcCCCEEEEEeCCccccCHHHHHHHHHHHHhcCC-CeEEEEECCCCCccc
Confidence 0001113567889999999999999999999999999998877 7899999864 8864
Q ss_pred CHHHHHHHHHHHHHhc
Q 025121 235 VPKEMDEVCNWLTARL 250 (257)
Q Consensus 235 ~~~~~~~~~~~l~~~l 250 (257)
..-..+.+.+-|+++|
T Consensus 339 fL~e~~~~~~~I~~fL 354 (357)
T d2b61a1 339 FLVDYDQFEKRIRDGL 354 (357)
T ss_dssp HHHCHHHHHHHHHHHH
T ss_pred cCcCHHHHHHHHHHHH
Confidence 3222333444444443
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=99.62 E-value=1.5e-14 Score=112.96 Aligned_cols=203 Identities=16% Similarity=0.183 Sum_probs=128.5
Q ss_pred CCCCCceEEEEEccCCCCcc-------------chHHHh---hcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCC
Q 025121 29 PKGKHQATIVWLHGLGDNGS-------------SWSQLL---ESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELS 92 (257)
Q Consensus 29 ~~~~~~~~vi~~HG~~~~~~-------------~~~~~~---~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~ 92 (257)
.+....++||+.|++.++.. .|..++ +.|....|-||++|..|.+.+..+...... . ....
T Consensus 37 ln~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt~~yfVI~~n~lG~~~~ss~~~s~~p-~--~~~~ 113 (362)
T d2pl5a1 37 LSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPLSIHP-E--TSTP 113 (362)
T ss_dssp CCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTTSBCT-T--TSSB
T ss_pred cCCCCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCccccEEEeeccccCcccccCcccccc-c--cccc
Confidence 33445679999999988742 233322 344567899999999987665443221110 0 0000
Q ss_pred CCCCCchhhHHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCc---
Q 025121 93 DDGPEDWEGLDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGS--- 169 (257)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--- 169 (257)
....-+.-++.+.+..-..++++.....-..|+|.||||..|+.+|.+ ||+.++.+|.+++.....
T Consensus 114 yg~~fP~~t~~D~v~~~~~ll~~LGI~~l~~viG~SmGGmqAl~wA~~-----------yPd~v~~~v~ia~sa~~s~~~ 182 (362)
T d2pl5a1 114 YGSRFPFVSIQDMVKAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIA-----------YPNSLSNCIVMASTAEHSAMQ 182 (362)
T ss_dssp CGGGSCCCCHHHHHHHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHH-----------STTSEEEEEEESCCSBCCHHH
T ss_pred cCcCCccchhHHHHHHHHHHHHHhCcCeeEEEeehhHHHHHHHHHHHh-----------CchHhhhhcccccccccCHHH
Confidence 001112334556666666666666555345688999999999999995 599999999887631000
Q ss_pred ----------------------------h-----------------hhhhcc----------------------------
Q 025121 170 ----------------------------R-----------------NLRNKI---------------------------- 176 (257)
Q Consensus 170 ----------------------------~-----------------~~~~~~---------------------------- 176 (257)
. .+...+
T Consensus 183 ~~~~~~~~~aI~~Dp~~~~G~Y~~~~P~~GL~~AR~~~~~~y~s~~~~~~~f~~~~~~~~~~~~~~~ve~yl~~~g~k~~ 262 (362)
T d2pl5a1 183 IAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGESFV 262 (362)
T ss_dssp HHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCSS
T ss_pred HHHHHHHHHHHhcCCccccCCcccCChhHHHHHHHHHHHHHHcCchhhhhhhccccccccccchhHHHHHHHHHHHHHHH
Confidence 0 000000
Q ss_pred cc----------------------chHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecC-CCCc
Q 025121 177 EG----------------------SHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEG-LGHY 233 (257)
Q Consensus 177 ~~----------------------~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g-~~H~ 233 (257)
.. ........++.|+|+|..+.|.++|++..+.+++.++.++. ++++++++. .||.
T Consensus 263 ~rfDan~yl~l~~a~~~~Di~~~~~l~~aL~~I~AkvLvi~~~sD~lFpp~~~~~~a~~l~~a~~-~v~~~eI~S~~GHd 341 (362)
T d2pl5a1 263 DRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADK-RVFYVELQSGEGHD 341 (362)
T ss_dssp SCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTC-CEEEEEECCCBSSG
T ss_pred hcCCHHHHHHHHhhhhcccccccccHHHHHhhCCCCEEEEEeCcccCcCHHHHHHHHHHHHhCCC-CeEEEEeCCCCCcc
Confidence 00 00113567889999999999999999999999999999887 788888864 5886
Q ss_pred cC----HHHHHHHHHHH
Q 025121 234 TV----PKEMDEVCNWL 246 (257)
Q Consensus 234 ~~----~~~~~~~~~~l 246 (257)
.. .+..+.+.+||
T Consensus 342 aFL~e~~~~~~~I~~FL 358 (362)
T d2pl5a1 342 SFLLKNPKQIEILKGFL 358 (362)
T ss_dssp GGGSCCHHHHHHHHHHH
T ss_pred hhccCHHHHHHHHHHHH
Confidence 53 33334444454
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.61 E-value=2.8e-14 Score=108.81 Aligned_cols=197 Identities=14% Similarity=0.112 Sum_probs=113.3
Q ss_pred CCceEEEEEccCCC--CccchHH---HhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025121 32 KHQATIVWLHGLGD--NGSSWSQ---LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 32 ~~~~~vi~~HG~~~--~~~~~~~---~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
.+.|+|+|+||.++ +...|.. +.+.+.+.++.||.||.... .....|+...... ............+
T Consensus 27 ~~~p~lyllhG~~g~~d~~~W~~~~~~~~~~~~~~~ivV~P~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~ 98 (280)
T d1dqza_ 27 GGPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQS-------SFYTDWYQPSQSN-GQNYTYKWETFLT 98 (280)
T ss_dssp CSSSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTT-------CTTSBCSSSCTTT-TCCSCCBHHHHHH
T ss_pred CCCCEEEECCCCCCCCccchhhhcchHHHHHHhCCcEEEEECCCCC-------CcCccccCCcccc-cCCcchhHHHHHH
Confidence 35689999999765 4456664 44556678999999984311 1111222111111 1111111112223
Q ss_pred HHHHHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc--------
Q 025121 107 AHIANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI-------- 176 (257)
Q Consensus 107 ~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-------- 176 (257)
+.|..++++. ...+++++.|+||||+.|+.++.++ |+++++++++||.+..........
T Consensus 99 ~el~~~i~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~-----------Pd~F~av~s~SG~~~~~~~~~~~~~~~~~~~~ 167 (280)
T d1dqza_ 99 REMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYY-----------PQQFPYAASLSGFLNPSESWWPTLIGLAMNDS 167 (280)
T ss_dssp THHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHC-----------TTTCSEEEEESCCCCTTSTTHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCceEEEEechHHHHHHHHHHhC-----------cCceeEEEEecCccCcccCcchhhhhhhHhhc
Confidence 4444444332 2345899999999999999999965 999999999999765332111000
Q ss_pred ------------------cc---chHHHhhhcCCCEEEEccCCCCccc--------------chhhHHHHHHhhhcCcee
Q 025121 177 ------------------EG---SHEAARRAASLPILLTHGLCDDVVP--------------YKYGEKSANCLSISGFRH 221 (257)
Q Consensus 177 ------------------~~---~~~~~~~~~~~P~l~~~G~~D~~v~--------------~~~~~~~~~~l~~~~~~~ 221 (257)
.. ..........+++++.+|+.|...+ ......+.+.+.+.+...
T Consensus 168 ~~~~~~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~~g~~~ 247 (280)
T d1dqza_ 168 GGYNANSMWGPSSDPAWKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPAKFLEGLTLRTNQTFRDTYAADGGRN 247 (280)
T ss_dssp TSCCHHHHHCSTTSHHHHHTCTTTTHHHHHHHTCEEEEECCCSCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred cCCCHhhccCCcchhhhhhcCHHHHHHHhhhcCCeEEEEeCCCCCccccccccccchhhHHHHHHHHHHHHHHHHcCCCe
Confidence 00 0001112245788999998876443 234567788888877644
Q ss_pred eEEEEecCCCCccC--HHHHHHHHHHHH
Q 025121 222 LTFKSFEGLGHYTV--PKEMDEVCNWLT 247 (257)
Q Consensus 222 ~~~~~~~g~~H~~~--~~~~~~~~~~l~ 247 (257)
..+...++++|... .+.+..++-.+.
T Consensus 248 ~~~~~~~~GgH~W~~W~~~L~~~~p~~~ 275 (280)
T d1dqza_ 248 GVFNFPPNGTHSWPYWNEQLVAMKADIQ 275 (280)
T ss_dssp EEEECCSCCCSSHHHHHHHHHHTHHHHH
T ss_pred EEEEEcCCCccCchHHHHHHHHHhHHHH
Confidence 55555566789754 444443333333
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=99.61 E-value=6.6e-16 Score=118.51 Aligned_cols=182 Identities=13% Similarity=0.041 Sum_probs=109.3
Q ss_pred ceEEEEEccCCCCccc--hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHH
Q 025121 34 QATIVWLHGLGDNGSS--WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIAN 111 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (257)
..+|||+||++.+... |..+++.|.+.||.|+.+|.|++|.+. ......+....+..
T Consensus 31 ~~PVvlvHG~~~~~~~~~~~~~~~~L~~~Gy~v~~~d~~g~g~~d---------------------~~~sae~la~~i~~ 89 (317)
T d1tcaa_ 31 SKPILLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLND---------------------TQVNTEYMVNAITA 89 (317)
T ss_dssp SSEEEEECCTTCCHHHHHTTTHHHHHHTTTCEEEEECCTTTTCSC---------------------HHHHHHHHHHHHHH
T ss_pred CCcEEEECCCCCCCcchhHHHHHHHHHhCCCeEEEecCCCCCCCc---------------------hHhHHHHHHHHHHH
Confidence 3468999999987665 556888898899999999988643211 12223334444444
Q ss_pred HhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhh-------------hhcccc
Q 025121 112 LLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNL-------------RNKIEG 178 (257)
Q Consensus 112 ~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-------------~~~~~~ 178 (257)
+++... .++|.|+||||||.++..++.+.+ ....++..+|.+++........ .+....
T Consensus 90 v~~~~g-~~kV~lVGhS~GG~~a~~~l~~~p--------~~~~~V~~~v~i~~~~~Gt~~a~~~~~~~~~~pa~~q~~~~ 160 (317)
T d1tcaa_ 90 LYAGSG-NNKLPVLTWSQGGLVAQWGLTFFP--------SIRSKVDRLMAFAPDYKGTVLAGPLDALAVSAPSVWQQTTG 160 (317)
T ss_dssp HHHHTT-SCCEEEEEETHHHHHHHHHHHHCG--------GGTTTEEEEEEESCCTTCBGGGHHHHHTTCBCHHHHHTBTT
T ss_pred HHHhcc-CCceEEEEeCchHHHHHHHHHHCC--------CcchheeEEEEeCCCCCCcccccchhhhhccCchhhhhcCC
Confidence 443332 349999999999999999988642 1135789999998754322110 000000
Q ss_pred ch------HHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEe-------cCCCCccC---HHHHHHH
Q 025121 179 SH------EAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSF-------EGLGHYTV---PKEMDEV 242 (257)
Q Consensus 179 ~~------~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~-------~g~~H~~~---~~~~~~~ 242 (257)
.. ........+|+..|++..|.+|.+..+..+.+..+.. +++=+++ +-.+|.-+ +..+..+
T Consensus 161 s~fl~~L~~~~~~~~~V~~t~I~s~~D~iV~P~~~~~~~~~~~~~---~~~Ni~vq~~c~~~~~~~H~~l~~~p~~~~~v 237 (317)
T d1tcaa_ 161 SALTTALRNAGGLTQIVPTTNLYSATDEIVQPQVSNSPLDSSYLF---NGKNVQAQAVCGPLFVIDHAGSLTSQFSYVVG 237 (317)
T ss_dssp CHHHHHHHHTTTTBCSSCEEEEECTTCSSSCCCCSSSTTSTTCCB---TSEEEEHHHHHCTTCCCCTTHHHHBHHHHHHH
T ss_pred cHHHHHHHhCCCCCCCCCEEEEecCCCcccCccccchhccccCCC---CceeEEeecccCCCCcCCccccccCHHHHHHH
Confidence 00 1111234689999999999999876654433332222 3343333 23467533 4455666
Q ss_pred HHHHHH
Q 025121 243 CNWLTA 248 (257)
Q Consensus 243 ~~~l~~ 248 (257)
.+-|.+
T Consensus 238 ~daL~~ 243 (317)
T d1tcaa_ 238 RSALRS 243 (317)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 666643
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.61 E-value=3.4e-15 Score=112.29 Aligned_cols=185 Identities=19% Similarity=0.102 Sum_probs=117.8
Q ss_pred CCCCceEEEEEcc--CCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHH
Q 025121 30 KGKHQATIVWLHG--LGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAA 107 (257)
Q Consensus 30 ~~~~~~~vi~~HG--~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 107 (257)
.+...|+|+++|| .+++...|..+++.|. ..+.|+++|.||++.+ .....++++.++
T Consensus 38 ~g~~~~~l~c~~~~~~gg~~~~y~~La~~L~-~~~~V~al~~pG~~~~--------------------e~~~~s~~~~a~ 96 (255)
T d1mo2a_ 38 DGPGEVTVICCAGTAAISGPHEFTRLAGALR-GIAPVRAVPQPGYEEG--------------------EPLPSSMAAVAA 96 (255)
T ss_dssp CCSCSSEEEEECCCSSSCSGGGGHHHHHHHT-TTCCEEEECCTTSSTT--------------------CCEESSHHHHHH
T ss_pred CCCCCCeEEEECCCCCCCCHHHHHHHHHhcC-CCceEEEEeCCCcCCC--------------------CCCCCCHHHHHH
Confidence 3456789999998 4677789999999997 5689999999975311 011234566666
Q ss_pred HHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc-----------
Q 025121 108 HIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI----------- 176 (257)
Q Consensus 108 ~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------- 176 (257)
.+.+.+.......+++|+||||||.+|+.+|.+... ....+..++++.++.|.........
T Consensus 97 ~~~~~i~~~~~~~P~~L~GhS~Gg~vA~e~A~~l~~--------~g~~v~~lvlld~~~p~~~~~~~~~~~~~~~~~~~~ 168 (255)
T d1mo2a_ 97 VQADAVIRTQGDKPFVVAGHSAGALMAYALATELLD--------RGHPPRGVVLIDVYPPGHQDAMNAWLEELTATLFDR 168 (255)
T ss_dssp HHHHHHHHTTSSSCEEEEECSTTHHHHHHHHHHHHH--------HTCCCSEEEEEECSCSSHHHHHHHHHHHHHTTCC--
T ss_pred HHHHHHHHhCCCCCEEEEEeCCcHHHHHHHHHhhHh--------cCCCccEEEEECCCCCCCccchhhHHHHHHHHhhcc
Confidence 666666554444589999999999999999986421 1345888888887765432111100
Q ss_pred -----------------ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCc-cCHHH
Q 025121 177 -----------------EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHY-TVPKE 238 (257)
Q Consensus 177 -----------------~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~-~~~~~ 238 (257)
............+|++++.+++|....... .+.... . ..++.+.++| +|+ ++.+.
T Consensus 169 ~~~~~~~~~l~a~~~~~~~~~~~~~~~~~~p~l~v~a~~~~~~~~~~--~w~~~~---~-~~~~~~~v~G-~H~~ml~~~ 241 (255)
T d1mo2a_ 169 ETVRMDDTRLTALGAYDRLTGQWRPRETGLPTLLVSAGEPMGPWPDD--SWKPTW---P-FEHDTVAVPG-DHFTMVQEH 241 (255)
T ss_dssp --CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCSSSSCCTTC--CCCCCC---C-SSCEEEECCS-CCSSCSSCC
T ss_pred ccccCCHHHHHHHHHHHHHHhcCCCccccceEEEeecCCCCCcchhh--HHHHhC---C-CCcEEEEECC-CCccccccc
Confidence 000011123468899999998885543322 111111 1 1578999997 887 44455
Q ss_pred HHHHHHHHHHhc
Q 025121 239 MDEVCNWLTARL 250 (257)
Q Consensus 239 ~~~~~~~l~~~l 250 (257)
.+.+.+-|+++|
T Consensus 242 ~~~~A~~i~~~L 253 (255)
T d1mo2a_ 242 ADAIARHIDAWL 253 (255)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 555666665554
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.60 E-value=3.2e-15 Score=117.65 Aligned_cols=204 Identities=12% Similarity=-0.018 Sum_probs=127.4
Q ss_pred cCCCCCceEEeCCCCCCceEEEEEccCCCCccc----hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCC
Q 025121 17 RTFEFGRTHVVRPKGKHQATIVWLHGLGDNGSS----WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELS 92 (257)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~vi~~HG~~~~~~~----~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~ 92 (257)
+++.+...++.+..+.+.|+||+.||++..... +....+.|+++||.|+++|.||+|.+ +|.. .
T Consensus 14 DGv~L~~~vy~P~~~~~~P~il~~~pyg~~~~~~~~~~~~~~~~~a~~GY~vv~~d~RG~g~S--~G~~-----~----- 81 (347)
T d1ju3a2 14 DGVRLAVDLYRPDADGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFAS--EGEF-----V----- 81 (347)
T ss_dssp TSCEEEEEEEEECCSSCEEEEEEEESSCTTCCHHHHTTSCCTHHHHHTTCEEEEEECTTSTTC--CSCC-----C-----
T ss_pred CCCEEEEEEEEcCCCCCEEEEEEEcCCCCccccCcCcccHHHHHHHHCCCEEEEEeeCCcccc--CCcc-----c-----
Confidence 455555666666666788999999998764321 22244556679999999998876533 2211 0
Q ss_pred CCCCCchhhHHHHHHHHHHHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchh
Q 025121 93 DDGPEDWEGLDASAAHIANLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRN 171 (257)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 171 (257)
. ......+..++.+++..+. .+.+|+++|+|+||.+++.+|... ++.+++++...+.......
T Consensus 82 -~----~~~~~~d~~d~i~w~~~q~~~~grVg~~G~SygG~~~~~~A~~~-----------~~~l~aiv~~~~~~d~~~~ 145 (347)
T d1ju3a2 82 -P----HVDDEADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSG-----------VGGLKAIAPSMASADLYRA 145 (347)
T ss_dssp -T----TTTHHHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTC-----------CTTEEEBCEESCCSCTCCC
T ss_pred -c----ccchhhhHHHHHHHHHhhccCCcceEeeeccccccchhhhhhcc-----------cccceeeeeccccchhhhh
Confidence 0 1111223344455554442 235999999999999999999854 6677777766654321100
Q ss_pred -------------h----------------------------------------------------------hhcc----
Q 025121 172 -------------L----------------------------------------------------------RNKI---- 176 (257)
Q Consensus 172 -------------~----------------------------------------------------------~~~~---- 176 (257)
. .+..
T Consensus 146 ~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (347)
T d1ju3a2 146 PWYGPGGALSVEALLGWSALIGTGLITSRSDARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQVVDHP 225 (347)
T ss_dssp CCSCTTCCCCHHHHHHHHHHHHHHHHTTSSSCCTTHHHHHHHHHHHHHCHHHHHTCSSTTCCTTHHHHCTHHHHTTTTCC
T ss_pred hhhhcCCccchhhHHHHHHHhhccccccccccCcchhhHHhhhhhhcccchhhhccCccccccccccchhhHHHHhhhcc
Confidence 0 0000
Q ss_pred -------ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC--------------
Q 025121 177 -------EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV-------------- 235 (257)
Q Consensus 177 -------~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~-------------- 235 (257)
..........+++|+|+++|..|..++. +.++++.++... +.++++-|. +|...
T Consensus 226 ~~~~~w~~~~~~~~~~~i~vP~L~i~G~~D~~~~~--~~~~~~~~~~~~--~~~liigpw-~H~~~~~~~~~~~~g~~~~ 300 (347)
T d1ju3a2 226 DNDESWQSISLFERLGGLATPALITAGWYDGFVGE--SLRTFVAVKDNA--DARLVVGPW-SHSNLTGRNADRKFGIAAT 300 (347)
T ss_dssp SCCHHHHTTCCHHHHTTCCCCEEEEEEEECTTHHH--HHHHHHHHTTTS--CEEEEEEEE-ESSCCSSEETTEECCGGGS
T ss_pred cchhhhhcCCHHHHhhcCCCCEEEeccccCCCcch--hHHHHHHhhccC--CceEEEcCc-cccCcccccCCCCCCcccc
Confidence 0011224467889999999999987654 456777776542 567888775 66421
Q ss_pred ---HHHHHHHHHHHHHhcCcC
Q 025121 236 ---PKEMDEVCNWLTARLGLE 253 (257)
Q Consensus 236 ---~~~~~~~~~~l~~~l~~~ 253 (257)
.+.....++|+...|+..
T Consensus 301 ~~~~~~~~~~l~wfD~~LKg~ 321 (347)
T d1ju3a2 301 YPIQEATTMHKAFFDRHLRGE 321 (347)
T ss_dssp CCHHHHHHHHHHHHHHHTSCC
T ss_pred ccHHHHHHHHHHHHHHHhCCC
Confidence 334577899999999754
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.60 E-value=7.4e-14 Score=105.63 Aligned_cols=190 Identities=13% Similarity=0.087 Sum_probs=116.6
Q ss_pred ceEEEEEccCCC--CccchHH---HhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025121 34 QATIVWLHGLGD--NGSSWSQ---LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 34 ~~~vi~~HG~~~--~~~~~~~---~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
.|+|+++||.++ +...|.. +.+.+...++.|+.||.-. ..|+... ........+ ....+.
T Consensus 27 ~pvlylLhG~~g~~~~~~w~~~~~~~~~~~~~~~iVV~p~g~~-----------~~~y~~~--~~~~~~~~~--tfl~~e 91 (267)
T d1r88a_ 27 PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGA-----------YSMYTNW--EQDGSKQWD--TFLSAE 91 (267)
T ss_dssp SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCT-----------TSTTSBC--SSCTTCBHH--HHHHTH
T ss_pred CCEEEEcCCCCCCCCcchhhhccHHHHHHhhCCeEEEEECCCC-----------CcCCccc--cccccccHH--HHHHHH
Confidence 389999999755 3445755 4455567899999998321 1122111 011111222 223444
Q ss_pred HHHHhccC--CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhc-----------
Q 025121 109 IANLLSTE--PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNK----------- 175 (257)
Q Consensus 109 ~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~----------- 175 (257)
|..++++. ...+++++.|+||||+.|+.++.++ |+.+++++++||.+.........
T Consensus 92 L~~~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~-----------Pd~F~av~~~SG~~~~~~~~~~~~~~~~~~~~~~ 160 (267)
T d1r88a_ 92 LPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFH-----------PDRFGFAGSMSGFLYPSNTTTNGAIAAGMQQFGG 160 (267)
T ss_dssp HHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHC-----------TTTEEEEEEESCCCCTTSHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcCCCCCceEEEEEcchHHHHHHHHHhC-----------cccccEEEEeCCccCCCCccchhhhhhHHhhhcC
Confidence 55555442 2345899999999999999999965 99999999999976543211000
Q ss_pred ---------------ccc---chHHHhhhcCCCEEEEccCCCCcccc-----------hhhHHHHHHhhhcCceeeEEEE
Q 025121 176 ---------------IEG---SHEAARRAASLPILLTHGLCDDVVPY-----------KYGEKSANCLSISGFRHLTFKS 226 (257)
Q Consensus 176 ---------------~~~---~~~~~~~~~~~P~l~~~G~~D~~v~~-----------~~~~~~~~~l~~~~~~~~~~~~ 226 (257)
... ...........++++.+|++|..+.. .....+.+.+.+.+..++++..
T Consensus 161 ~~~~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 240 (267)
T d1r88a_ 161 VDTNGMWGAPQLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEAMGNSRMFYNQYRSVGGHNGHFDF 240 (267)
T ss_dssp CCTHHHHCCGGGSTTGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred CcHhhccCCcchHhHHhcCHHHHHHhccccCceEEEEecCCCcccccchhhhhHHHhhhhHHHHHHHHHHcCCCcEEEEE
Confidence 000 00112233467899999999976543 2345677778776654778888
Q ss_pred ecCCCCccC--HHHHHHHHHHHHHh
Q 025121 227 FEGLGHYTV--PKEMDEVCNWLTAR 249 (257)
Q Consensus 227 ~~g~~H~~~--~~~~~~~~~~l~~~ 249 (257)
.++++|.+. .+.+..+...|...
T Consensus 241 ~~~G~H~W~~W~~~L~~~~p~~~~~ 265 (267)
T d1r88a_ 241 PASGDNGWGSWAPQLGAMSGDIVGA 265 (267)
T ss_dssp CSSCCSSHHHHHHHHHHHHHHHHHH
T ss_pred cCCCeEChHHHHHHHHHHHHHHHHh
Confidence 888899753 55555555555443
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=99.60 E-value=5.2e-15 Score=110.79 Aligned_cols=118 Identities=17% Similarity=0.132 Sum_probs=88.9
Q ss_pred CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcc----ccchHHHhhhcCCCEEE
Q 025121 118 ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI----EGSHEAARRAASLPILL 193 (257)
Q Consensus 118 ~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~P~l~ 193 (257)
+.+++.++|+|+||+.++.++.++ |+.+++++++||.+.......... .............|+++
T Consensus 121 d~~~~~i~G~S~GG~~al~~~~~~-----------P~~F~a~~~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 189 (246)
T d3c8da2 121 RADRTVVAGQSFGGLSALYAGLHW-----------PERFGCVLSQSGSYWWPHRGGQQEGVLLEKLKAGEVSAEGLRIVL 189 (246)
T ss_dssp CGGGCEEEEETHHHHHHHHHHHHC-----------TTTCCEEEEESCCTTTTCTTSSSCCHHHHHHHTTSSCCCSCEEEE
T ss_pred CccceEEEecCchhHHHhhhhccC-----------CchhcEEEcCCcccccccCCccchHHHHHHhhhhhhhccCCCeEE
Confidence 345899999999999999999965 899999999999654332211110 01111223455789999
Q ss_pred EccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccC--HHHHHHHHHHHHHh
Q 025121 194 THGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTV--PKEMDEVCNWLTAR 249 (257)
Q Consensus 194 ~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~--~~~~~~~~~~l~~~ 249 (257)
.+|+.|..+. +.++++.+.+++.|+ ++++++++| ||... .+.+.+.+.||-+-
T Consensus 190 ~~G~~D~~~~-~~~~~l~~~L~~~g~-~~~~~~~~G-gH~~~~W~~~l~~~l~~l~~~ 244 (246)
T d3c8da2 190 EAGIREPMIM-RANQALYAQLHPIKE-SIFWRQVDG-GHDALCWRGGLMQGLIDLWQP 244 (246)
T ss_dssp EEESSCHHHH-HHHHHHHHHTGGGTT-SEEEEEESC-CSCHHHHHHHHHHHHHHHHGG
T ss_pred EecCCCcchh-HHHHHHHHHHHHCCC-CEEEEEeCC-CCChHHHHHHHHHHHHHHHHh
Confidence 9999998764 678999999999998 899999998 89865 66777777777654
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=99.57 E-value=7.5e-14 Score=109.46 Aligned_cols=121 Identities=15% Similarity=0.113 Sum_probs=75.8
Q ss_pred CCceEEEEEccCCCCccc---hHHHh---hcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025121 32 KHQATIVWLHGLGDNGSS---WSQLL---ESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~---~~~~~---~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
.+.++||+.|++.++... |..++ +.|.-..|-||++|..|.+.+..+-... .....+.......-+..++.+.
T Consensus 42 ~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt~kyfVI~~n~lG~~~gst~p~s~-~p~~~~~~~yg~~FP~~ti~D~ 120 (376)
T d2vata1 42 SRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSP-DPDAEGQRPYGAKFPRTTIRDD 120 (376)
T ss_dssp TSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSB-CTTTC--CBCGGGCCCCCHHHH
T ss_pred CCCCEEEEcCCCcCCccccccHHHhCCCCCccCccceEEEEeccCCCCcCCCCCCCC-CcccccCCcccccCCcchhHHH
Confidence 456799999999887753 33333 4555689999999999876543221100 0000000000011123355666
Q ss_pred HHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEecc
Q 025121 106 AAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSG 164 (257)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 164 (257)
+..-..++++.....-..|+|.||||..|+.++.. ||+++..+|.+++
T Consensus 121 v~aq~~ll~~LGI~~l~aViG~SmGGmqal~wa~~-----------~Pd~v~~li~Ia~ 168 (376)
T d2vata1 121 VRIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFF-----------GPEYVRKIVPIAT 168 (376)
T ss_dssp HHHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGG-----------CTTTBCCEEEESC
T ss_pred HHHHHHHHHHhCcceEEEeecccHHHHHHHHHHHh-----------chHHHhhhccccc
Confidence 66655566655544234799999999999999995 5999999988865
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.53 E-value=1.2e-13 Score=109.70 Aligned_cols=133 Identities=13% Similarity=0.000 Sum_probs=78.9
Q ss_pred CCCCCceEEeCCCCCCceEEEEEccCCCCcc-------ch----HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccc
Q 025121 18 TFEFGRTHVVRPKGKHQATIVWLHGLGDNGS-------SW----SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWF 86 (257)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~vi~~HG~~~~~~-------~~----~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~ 86 (257)
++++...++.+....+.|+||+.|+++.... .+ ....+.|+++||.|+.+|.||.|.+. |.. .++
T Consensus 34 G~~L~~~v~~P~~~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~--G~~--~~~ 109 (381)
T d1mpxa2 34 GVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSE--GDY--VMT 109 (381)
T ss_dssp SCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCC--SCC--CTT
T ss_pred CCEEEEEEEEeCCCCCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCEEEEEecCccCCCC--Cce--ecc
Confidence 4555555566666678899999998764211 11 12445677899999999988765432 210 000
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025121 87 DVGELSDDGPEDWEGLDASAAHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
...... ........+.+..+.+..+.++. ....+|+++|+|+||++++.+|... ++.++++|..++.
T Consensus 110 ~~~~~~-~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~-----------~~~l~a~v~~~~~ 177 (381)
T d1mpxa2 110 RPLRGP-LNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNP-----------HPALKVAVPESPM 177 (381)
T ss_dssp CCCSBT-TBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSC-----------CTTEEEEEEESCC
T ss_pred chhhhh-cccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhcc-----------ccccceeeeeccc
Confidence 000000 00111123333344333333332 3345999999999999999888853 7788888888764
Q ss_pred C
Q 025121 166 L 166 (257)
Q Consensus 166 ~ 166 (257)
.
T Consensus 178 ~ 178 (381)
T d1mpxa2 178 I 178 (381)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=99.48 E-value=2.4e-14 Score=111.11 Aligned_cols=102 Identities=17% Similarity=0.140 Sum_probs=74.4
Q ss_pred CCceEEEEEccCCCCccc------hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHH
Q 025121 32 KHQATIVWLHGLGDNGSS------WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDAS 105 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~------~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~ 105 (257)
+++.+|||+||++++... |..+.+.|.+.||.|+++|.|++|.+.. . .....+.
T Consensus 6 ~~k~PvvlvHG~~g~~~~~~~~~~~~~~~~~L~~~G~~V~~~~~~g~g~s~~-----------------~---~~~~~~l 65 (319)
T d1cvla_ 6 ATRYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDG-----------------P---NGRGEQL 65 (319)
T ss_dssp CCSSCEEEECCTTBSSEETTTEESSTTHHHHHHHTTCCEEECCCBCSSCTTS-----------------T---TSHHHHH
T ss_pred CCCCCEEEECCCCCCcchhhhhhhHHHHHHHHHHCCCEEEEecCCCCCCCCC-----------------C---cccHHHH
Confidence 445568899999887653 6778888888999999999986542211 1 1123444
Q ss_pred HHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025121 106 AAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
.+++.++++.... +++.|+||||||.++..++.+. |++++.++.++++
T Consensus 66 ~~~i~~~~~~~~~-~~v~lvGhS~GG~~~~~~~~~~-----------p~~v~~vv~i~~p 113 (319)
T d1cvla_ 66 LAYVKQVLAATGA-TKVNLIGHSQGGLTSRYVAAVA-----------PQLVASVTTIGTP 113 (319)
T ss_dssp HHHHHHHHHHHCC-SCEEEEEETTHHHHHHHHHHHC-----------GGGEEEEEEESCC
T ss_pred HHHHHHHHHHhCC-CCEEEEeccccHHHHHHHHHHC-----------ccccceEEEECCC
Confidence 5555555554333 3999999999999999999964 8999999999874
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.48 E-value=2e-12 Score=103.44 Aligned_cols=169 Identities=17% Similarity=0.087 Sum_probs=111.4
Q ss_pred hcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHHHHhccC----------------CC
Q 025121 55 ESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTE----------------PA 118 (257)
Q Consensus 55 ~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~ 118 (257)
+.|+.+||.|+.+|.||+|.+ +|. ++. ..... .++..++.+++... -.
T Consensus 130 ~~~~~~GYavv~~D~RG~g~S--~G~-----~~~--------~~~~e-~~D~~~~IeWl~~~~~~~~~~~~~~~~~q~Ws 193 (405)
T d1lnsa3 130 DYFLTRGFASIYVAGVGTRSS--DGF-----QTS--------GDYQQ-IYSMTAVIDWLNGRARAYTSRKKTHEIKASWA 193 (405)
T ss_dssp HHHHTTTCEEEEECCTTSTTS--CSC-----CCT--------TSHHH-HHHHHHHHHHHTTSSCEESSTTCCCEECCTTE
T ss_pred HHHHhCCCEEEEECCCCCCCC--CCc-----ccc--------CChhh-hhhHHHHHHHHHhccccccccccccccccccc
Confidence 456779999999998876432 231 111 11122 22333344444321 11
Q ss_pred CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhh------------------------
Q 025121 119 DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRN------------------------ 174 (257)
Q Consensus 119 ~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~------------------------ 174 (257)
+.+|+++|+|+||++++.+|... ++.+++++..++.....+.+..
T Consensus 194 nGkVGm~G~SY~G~~q~~aA~~~-----------pp~LkAivp~~~~~d~y~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 262 (405)
T d1lnsa3 194 NGKVAMTGKSYLGTMAYGAATTG-----------VEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYS 262 (405)
T ss_dssp EEEEEEEEETHHHHHHHHHHTTT-----------CTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCG
T ss_pred CCeeEEEecCHHHHHHHHHHhcC-----------CccceEEEecCccccHHHHhhcCCccccccchhhhhhhhhhccccc
Confidence 24899999999999999999853 7889999988765332110000
Q ss_pred ------------------------------------ccccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcC
Q 025121 175 ------------------------------------KIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISG 218 (257)
Q Consensus 175 ------------------------------------~~~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~ 218 (257)
+...........+++|+|+++|-.|..++...+.++++.+++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~w~~~s~~~~~~~I~vP~L~i~Gw~D~~v~~~~~~~~y~al~~~- 341 (405)
T d1lnsa3 263 RNLDGADFLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPEG- 341 (405)
T ss_dssp GGGSHHHHHHHHHHHHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCTT-
T ss_pred cccccchhhhchhhhhhccchhhhhhhhccccchhhhhhcChhhhhhcCCCCEEEEEeccCCCCCHHHHHHHHHHHHhC-
Confidence 0011122245678999999999999999998899999998753
Q ss_pred ceeeEEEEecCCCCccC-----HHHHHHHHHHHHHhcCcC
Q 025121 219 FRHLTFKSFEGLGHYTV-----PKEMDEVCNWLTARLGLE 253 (257)
Q Consensus 219 ~~~~~~~~~~g~~H~~~-----~~~~~~~~~~l~~~l~~~ 253 (257)
. ..++++.|+ +|... .+..+.+++|+...|+..
T Consensus 342 ~-~~~Lilgpw-~H~~~~~~~~~d~~~~~~~wFD~~LkG~ 379 (405)
T d1lnsa3 342 H-AKHAFLHRG-AHIYMNSWQSIDFSETINAYFVAKLLDR 379 (405)
T ss_dssp C-CEEEEEESC-SSCCCTTBSSCCHHHHHHHHHHHHHTTC
T ss_pred C-CcEEEEeCC-CCCCCcccccchHHHHHHHHHHHHhCCC
Confidence 2 467777785 88643 455788999999998654
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=99.47 E-value=7.1e-14 Score=105.57 Aligned_cols=115 Identities=18% Similarity=0.147 Sum_probs=77.9
Q ss_pred HHHHHHHHhccCCC--CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch-hhhhccccchH
Q 025121 105 SAAHIANLLSTEPA--DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR-NLRNKIEGSHE 181 (257)
Q Consensus 105 ~~~~~~~~~~~~~~--~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~ 181 (257)
....+..++..... ..+++++|+|+||.+++.++.+ ++.+.+++++++...... .+..... ..
T Consensus 124 ~~~~~~~~i~~~~~~d~~~~~i~G~S~GG~~a~~~~~~------------~~~f~~~~a~s~~~~~~~~~~~~~~~--~~ 189 (265)
T d2gzsa1 124 LETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS------------SSYFRSYYSASPSLGRGYDALLSRVT--AV 189 (265)
T ss_dssp HHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH------------CSSCSEEEEESGGGSTTHHHHHHHHH--TS
T ss_pred HHHHHHHHHHHhcCCCcCceEEEeccHHHHHHHHHHHc------------CcccCEEEEECCcccccchhhhhccc--cc
Confidence 34445555654432 2579999999999999988764 567778888887543221 1111110 01
Q ss_pred HHhhhcCCCEEEEccCC--------CCcccchhhHHHHHHhhhcCceeeEEEEecCCCCcc
Q 025121 182 AARRAASLPILLTHGLC--------DDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYT 234 (257)
Q Consensus 182 ~~~~~~~~P~l~~~G~~--------D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~ 234 (257)
........|+++.+|+. |..++.+.++++++.|+++|+ ++++.++||++|..
T Consensus 190 ~~~~~~~~~~~~~~g~~~~~~~~~~d~~~~~~~~~~l~~~L~~~g~-~~~~~~~pG~~Hg~ 249 (265)
T d2gzsa1 190 EPLQFCTKHLAIMEGSATQGDNRETHAVGVLSKIHTTLTILKDKGV-NAVFWDFPNLGHGP 249 (265)
T ss_dssp CTTTTTTCEEEEEECCC-----------CHHHHHHHHHHHHHHTTC-CEEEEECTTCCHHH
T ss_pred cccccCCCcEEEEcCCcccccccccccchhHHHHHHHHHHHHHCCC-CEEEEEcCCCCcch
Confidence 11234467888888877 666788889999999999998 89999999999964
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=99.43 E-value=1.1e-13 Score=90.80 Aligned_cols=89 Identities=13% Similarity=0.003 Sum_probs=62.2
Q ss_pred ceEEeCCCCCCceEEEEEccCCCCccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhH
Q 025121 23 RTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGL 102 (257)
Q Consensus 23 ~~~~~~~~~~~~~~vi~~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~ 102 (257)
..+.|...++ .|+|||+||. |..+.+.|. .+|+|+++|+||+|.+.. .+ .+.
T Consensus 11 ~~l~y~~~G~-G~pvlllHG~------~~~w~~~L~-~~yrvi~~DlpG~G~S~~-----------------p~---~s~ 62 (122)
T d2dsta1 11 LNLVFDRVGK-GPPVLLVAEE------ASRWPEALP-EGYAFYLLDLPGYGRTEG-----------------PR---MAP 62 (122)
T ss_dssp EEEEEEEECC-SSEEEEESSS------GGGCCSCCC-TTSEEEEECCTTSTTCCC-----------------CC---CCH
T ss_pred EEEEEEEEcC-CCcEEEEecc------ccccccccc-CCeEEEEEeccccCCCCC-----------------cc---ccc
Confidence 3455555554 4689999983 333456675 799999999998765421 11 233
Q ss_pred HHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHh
Q 025121 103 DASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
.+.++++.++++..... +..|+||||||.+++.++..
T Consensus 63 ~~~a~~i~~ll~~L~i~-~~~viG~S~Gg~ia~~laa~ 99 (122)
T d2dsta1 63 EELAHFVAGFAVMMNLG-APWVLLRGLGLALGPHLEAL 99 (122)
T ss_dssp HHHHHHHHHHHHHTTCC-SCEEEECGGGGGGHHHHHHT
T ss_pred chhHHHHHHHHHHhCCC-CcEEEEeCccHHHHHHHHhh
Confidence 45566666666665544 88999999999999999884
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.40 E-value=1.5e-13 Score=104.47 Aligned_cols=97 Identities=13% Similarity=0.113 Sum_probs=72.7
Q ss_pred ceEEEEEccCCCCccc-----hHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025121 34 QATIVWLHGLGDNGSS-----WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~-----~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
+.+|||+||++++... |..+.+.|.+.|++|+++|.++.+ .......+..+.
T Consensus 7 ~~PvvlvHG~~g~~~~~~~~yw~~i~~~L~~~G~~v~~~~~~~~~-----------------------~~~~~a~~l~~~ 63 (285)
T d1ex9a_ 7 KYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLD-----------------------TSEVRGEQLLQQ 63 (285)
T ss_dssp SSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCSSS-----------------------CHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCccccchhhHHHHHHHHHhCCCEEEEeCCCCCC-----------------------CcHHHHHHHHHH
Confidence 3358999999877544 677888888889999999987432 112333455555
Q ss_pred HHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025121 109 IANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 109 ~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
+.++++..... ++.|+||||||.++..++.+. |++++.++.+++.
T Consensus 64 i~~~~~~~g~~-~v~ligHS~GG~~~r~~~~~~-----------p~~v~~lv~i~tP 108 (285)
T d1ex9a_ 64 VEEIVALSGQP-KVNLIGHSHGGPTIRYVAAVR-----------PDLIASATSVGAP 108 (285)
T ss_dssp HHHHHHHHCCS-CEEEEEETTHHHHHHHHHHHC-----------GGGEEEEEEESCC
T ss_pred HHHHHHHcCCC-eEEEEEECccHHHHHHHHHHC-----------CccceeEEEECCC
Confidence 66555544333 899999999999999999864 8999999998764
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=99.39 E-value=6.6e-12 Score=99.72 Aligned_cols=131 Identities=9% Similarity=0.004 Sum_probs=76.9
Q ss_pred CCCCCceEEeCCCCCCceEEEEEccCCCCc--------cc----hHHHhhcCCCCceEEEccCCCCCCcccCCCCccccc
Q 025121 18 TFEFGRTHVVRPKGKHQATIVWLHGLGDNG--------SS----WSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAW 85 (257)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~vi~~HG~~~~~--------~~----~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w 85 (257)
++.+...++.+..+.+.|+||+.|.++... .. .......|+.+||.|+.+|.||.|.+. |. |
T Consensus 38 G~~L~~~v~~P~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d~RG~g~S~--G~----~ 111 (385)
T d2b9va2 38 GVKLYTVIVIPKNARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQ--GD----Y 111 (385)
T ss_dssp SCEEEEEEEEETTCCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCC--SC----C
T ss_pred CCEEEEEEEEcCCCCceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhCCcEEEEEcCCcccCCC--Cc----e
Confidence 455555555555667889999999875321 11 123445677899999999988765332 21 1
Q ss_pred ccCCCCC-CCCCCchhhHHHHHHHHHHHhccC-CCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEec
Q 025121 86 FDVGELS-DDGPEDWEGLDASAAHIANLLSTE-PADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLS 163 (257)
Q Consensus 86 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 163 (257)
....... ...........+..+.+..+.++. ..+.+|+++|+|+||++++.+|... ++.+++++...
T Consensus 112 ~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~-----------~~~l~a~~~~~ 180 (385)
T d2b9va2 112 VMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDP-----------HPALKVAAPES 180 (385)
T ss_dssp CTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSC-----------CTTEEEEEEEE
T ss_pred eeccccccccccchhhHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhcc-----------CCcceEEEEec
Confidence 0000000 000111223344444443344443 3345999999999999999999843 67788877665
Q ss_pred cC
Q 025121 164 GW 165 (257)
Q Consensus 164 ~~ 165 (257)
+.
T Consensus 181 ~~ 182 (385)
T d2b9va2 181 PM 182 (385)
T ss_dssp EC
T ss_pred cc
Confidence 43
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=99.34 E-value=2.1e-11 Score=92.09 Aligned_cols=101 Identities=18% Similarity=0.226 Sum_probs=63.6
Q ss_pred CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhcccc----chHHHhhhcCCCEEEE
Q 025121 119 DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEG----SHEAARRAASLPILLT 194 (257)
Q Consensus 119 ~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~l~~ 194 (257)
.+++++.|+|+||..++.++.++ |+.++++++++|.+............ ...........++++.
T Consensus 143 ~~~~~i~G~S~GG~~a~~~a~~~-----------pd~f~a~~~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (273)
T d1wb4a1 143 RMHRGFGGFAMGGLTTWYVMVNC-----------LDYVAYFMPLSGDYWYGNSPQDKANSIAEAINRSGLSKREYFVFAA 211 (273)
T ss_dssp GGGEEEEEETHHHHHHHHHHHHH-----------TTTCCEEEEESCCCCBSSSHHHHHHHHHHHHHHHTCCTTSCEEEEE
T ss_pred ccceEEEeeCCcchhhhhhhhcC-----------CCcceEEEEeCcccccCCCcccccccchhhhhhhhhcccceEEEEe
Confidence 35899999999999999999865 99999999999876433221111100 0111122234456777
Q ss_pred ccCCCCcccchhhHHHHHHhh----------hcCceeeEEEEecCCCCc
Q 025121 195 HGLCDDVVPYKYGEKSANCLS----------ISGFRHLTFKSFEGLGHY 233 (257)
Q Consensus 195 ~G~~D~~v~~~~~~~~~~~l~----------~~~~~~~~~~~~~g~~H~ 233 (257)
.|+.|..+. ......+.+. ..+. ++.+..+++++|.
T Consensus 212 ~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ggH~ 257 (273)
T d1wb4a1 212 TGSEDIAYA--NMNPQIEAMKALPHFDYTSDFSKG-NFYFLVAPGATHW 257 (273)
T ss_dssp EETTCTTHH--HHHHHHHHHHTSTTCCBBSCTTTC-CEEEEEETTCCSS
T ss_pred cCCCCcccc--cchhHHHHHHHHHHHHHHHHhcCC-CEEEEEECCCccC
Confidence 777775443 3333333332 2233 6788889999995
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=99.25 E-value=2.1e-11 Score=93.34 Aligned_cols=124 Identities=13% Similarity=0.104 Sum_probs=83.9
Q ss_pred CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccce-EEEeccCCC--Cc-----hhhhhcc--------------
Q 025121 119 DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRA-VVGLSGWLP--GS-----RNLRNKI-------------- 176 (257)
Q Consensus 119 ~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~--~~-----~~~~~~~-------------- 176 (257)
+++|+|+|+|+||++|+.++.. +++.+++ +..+++... .. .......
T Consensus 10 p~rI~V~G~SsGG~mA~~la~a-----------~sd~f~aga~vvAg~p~~ca~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (318)
T d2d81a1 10 PNSVSVSGLASGGYMAAQLGVA-----------YSDVFNVGFGVFAGGPYDCARNQYYTSCMYNGYPSITTPTANMKSWS 78 (318)
T ss_dssp EEEEEEEEETHHHHHHHHHHHH-----------TTTTSCSEEEEESCCCTTTTSSSCGGGGSTTCCCCCHHHHHHHHHHB
T ss_pred ccceEEEEECHHHHHHHHHHHh-----------cccceeeeEEEeccCchhhhcccchHHHhhcCCCCCcChhHHHHHHh
Confidence 3599999999999999999884 4788864 333333210 00 0000000
Q ss_pred ccchHHHhhhcCCCEEEEccCCCCcccchhhHHHHHHhhhcCc-eeeEEEEecCCCCccCH-------------------
Q 025121 177 EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGF-RHLTFKSFEGLGHYTVP------------------- 236 (257)
Q Consensus 177 ~~~~~~~~~~~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~-~~~~~~~~~g~~H~~~~------------------- 236 (257)
.............|++++||++|.+||++.++++.+.+++.+. .+++++..++++|.+..
T Consensus 79 ~~~i~~~~~~~~~pvll~hG~~D~~Vpp~~s~~l~~~l~~~~~~~~v~yv~~~gagH~fpT~~~g~g~~~c~~~~~pyi~ 158 (318)
T d2d81a1 79 GNQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTSPYIS 158 (318)
T ss_dssp TTTBCCGGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSCCTTCCCTTSCCTTCEE
T ss_pred hcCCcchhccCCCCEEEEecCCCCCcCHHHHHHHHHHHHcCcCCCceEEEEeCCCCCCCCCCCCCcccccccccCChhhh
Confidence 0001112234568999999999999999999999999987643 26899999999997641
Q ss_pred ----HHHHHHHHHHHHhcCcC
Q 025121 237 ----KEMDEVCNWLTARLGLE 253 (257)
Q Consensus 237 ----~~~~~~~~~l~~~l~~~ 253 (257)
+...++++||-.-+..+
T Consensus 159 ~C~~d~a~~iL~~~yg~~~~~ 179 (318)
T d2d81a1 159 NCNYDGAGAALKWIYGSLNAR 179 (318)
T ss_dssp ECSSCHHHHHHHHHHSSCCCC
T ss_pred cCCCcHHHHHHHHHhcccCcc
Confidence 23478888887766543
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.19 E-value=4e-11 Score=89.61 Aligned_cols=103 Identities=17% Similarity=0.255 Sum_probs=65.4
Q ss_pred EEEEEccCCCCcc---chHHHhhcCCC--CceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHHHH
Q 025121 36 TIVWLHGLGDNGS---SWSQLLESLPL--PNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIA 110 (257)
Q Consensus 36 ~vi~~HG~~~~~~---~~~~~~~~l~~--~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (257)
+||++||++++.. .|..+.+.+.+ .|+.|++++...... .... ......+.+.++.+.
T Consensus 7 PVVLvHGlg~s~~~~~~m~~l~~~l~~~~pG~~V~~l~~g~~~~--------~~~~---------~~~~~~~~~~~e~v~ 69 (279)
T d1ei9a_ 7 PLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLR--------EDVE---------NSFFLNVNSQVTTVC 69 (279)
T ss_dssp CEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCCSSSHH--------HHHH---------HHHHSCHHHHHHHHH
T ss_pred cEEEECCCCCCCCChHHHHHHHHHHHHHCCCeEEEEEEcCCCcc--------cccc---------cchhhhHHHHHHHHH
Confidence 6999999987643 46666666542 489999988532100 0000 000223455566666
Q ss_pred HHhccCC-CCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025121 111 NLLSTEP-ADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 111 ~~~~~~~-~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
+.++... ..+++.+|||||||.++-.++.+.+ ...+..+|.++++
T Consensus 70 ~~I~~~~~~~~~v~lVGhSqGGLiaR~~i~~~~----------~~~V~~lITLgsP 115 (279)
T d1ei9a_ 70 QILAKDPKLQQGYNAMGFSQGGQFLRAVAQRCP----------SPPMVNLISVGGQ 115 (279)
T ss_dssp HHHHSCGGGTTCEEEEEETTHHHHHHHHHHHCC----------SSCEEEEEEESCC
T ss_pred HHHHhccccccceeEEEEccccHHHHHHHHHcC----------CCCcceEEEECCC
Confidence 6665431 2248999999999999999998752 2358888888763
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=98.88 E-value=3.2e-09 Score=81.04 Aligned_cols=112 Identities=20% Similarity=0.287 Sum_probs=68.3
Q ss_pred CCceEEEEEccCCCCccc-hH-HHh-hcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSS-WS-QLL-ESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~-~~-~~~-~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
..+|++|++||+.++... |. .+. ..|...+++|+++|+.. +. ..+|.. ...+...+.+.+..
T Consensus 68 ~~~pt~iiiHGw~~~~~~~~~~~~~~a~l~~~d~NVI~VDW~~-------~a--~~~Y~~------a~~n~~~Vg~~ia~ 132 (337)
T d1rp1a2 68 TDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKK-------GS--QTSYTQ------AANNVRVVGAQVAQ 132 (337)
T ss_dssp TTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHH-------HH--SSCHHH------HHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcCCCCcchHHHHHHHHHhcCCceEEEEeecc-------cc--CcchHH------HHHHHHHHHHHHHH
Confidence 457999999999877654 33 333 45666789999999641 00 000100 00112222233333
Q ss_pred HHH-Hhcc-CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch
Q 025121 109 IAN-LLST-EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR 170 (257)
Q Consensus 109 ~~~-~~~~-~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 170 (257)
+.. +++. ....+++.|+|||+||++|-.+..+ ..++..++.+.|..|..+
T Consensus 133 ~i~~l~~~~g~~~~~vhlIGhSLGAhvAG~aG~~------------~~~l~rItgLDPA~P~F~ 184 (337)
T d1rp1a2 133 MLSMLSANYSYSPSQVQLIGHSLGAHVAGEAGSR------------TPGLGRITGLDPVEASFQ 184 (337)
T ss_dssp HHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHT------------STTCCEEEEESCCCTTTT
T ss_pred HHHHHHHhcCCChhheEEEeecHHHhhhHHHHHh------------hccccceeccCCCccccC
Confidence 333 2332 2344699999999999999877764 346889999988776554
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.75 E-value=1.1e-08 Score=77.93 Aligned_cols=113 Identities=19% Similarity=0.244 Sum_probs=70.4
Q ss_pred CCceEEEEEccCCCCccc-hH-HHh-hcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025121 32 KHQATIVWLHGLGDNGSS-WS-QLL-ESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~~-~~-~~~-~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
..+|++|++||+.++... |. .+. ..|...+++|+++|+.. +. ...|.. ...+...+.+.+..
T Consensus 68 ~~~pt~iiiHG~~~~~~~~~~~~~~~a~l~~~d~NVi~VDW~~-------~a--~~~Y~~------a~~n~~~Vg~~ia~ 132 (338)
T d1bu8a2 68 LDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRR-------GS--RTEYTQ------ASYNTRVVGAEIAF 132 (338)
T ss_dssp TTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHH-------HH--SSCHHH------HHHHHHHHHHHHHH
T ss_pred CCCceEEEeCcccCCCCcccHHHHHHHHHhcCCceEEEEechh-------hc--ccchHH------HHHhHHHHHHHHHH
Confidence 457999999999876654 33 333 34556789999999541 00 000100 00112233333333
Q ss_pred HHHHh-cc-CCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCch
Q 025121 109 IANLL-ST-EPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSR 170 (257)
Q Consensus 109 ~~~~~-~~-~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 170 (257)
+...+ .. ....+++.|+|||+||++|-.+..+. ..++..++.+.|..|..+
T Consensus 133 ~i~~l~~~~g~~~~~vhlIGhSLGAhiaG~ag~~l-----------~~kigrItgLDPA~P~F~ 185 (338)
T d1bu8a2 133 LVQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRL-----------EGHVGRITGLDPAEPCFQ 185 (338)
T ss_dssp HHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHT-----------TTCSSEEEEESCBCTTTT
T ss_pred HHHHHHHhcCCCcceeEEEeccHHHHHHHHHHHhh-----------ccccccccccccCcCccc
Confidence 33332 22 23446999999999999999998853 667999999988776654
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.63 E-value=1.3e-06 Score=70.11 Aligned_cols=67 Identities=21% Similarity=0.262 Sum_probs=52.4
Q ss_pred cCCCEEEEccCCCCcccchhhHHHHHHhhhcC--------------------c----eeeEEEEecCCCCccCHHHHHHH
Q 025121 187 ASLPILLTHGLCDDVVPYKYGEKSANCLSISG--------------------F----RHLTFKSFEGLGHYTVPKEMDEV 242 (257)
Q Consensus 187 ~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~--------------------~----~~~~~~~~~g~~H~~~~~~~~~~ 242 (257)
...+||+.+|..|-+||.-..+.+.+.+.-.+ . .+.+++.+.++||++..+.++..
T Consensus 360 ~~~rVliy~Gd~D~~~~~~gte~~i~~l~~~~~~~~~~~~~~~~~~~~~v~G~v~~~~nltf~~V~~AGHmVP~dqP~~a 439 (452)
T d1ivya_ 360 QKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFSHIAFLTIKGAGHMVPTDKPLAA 439 (452)
T ss_dssp TCCEEEEEEETTCSSSCHHHHHHHHHHTCCCEEEEEEEEEEECTTSCEEEEEEEEEESSEEEEEETTCCSSHHHHCHHHH
T ss_pred CCCEEEEEeCCcceeCCCHHHHHHHHhcCCccccccccceecccCCCCEEEEEEEEECCeEEEEECCccccCcccCHHHH
Confidence 46899999999999999988888888875211 0 14677888999999988877777
Q ss_pred HHHHHHhcCcC
Q 025121 243 CNWLTARLGLE 253 (257)
Q Consensus 243 ~~~l~~~l~~~ 253 (257)
.+.+++++..+
T Consensus 440 ~~m~~~fi~g~ 450 (452)
T d1ivya_ 440 FTMFSRFLNKQ 450 (452)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHcCC
Confidence 77777776543
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.46 E-value=9.1e-06 Score=64.47 Aligned_cols=65 Identities=17% Similarity=0.223 Sum_probs=48.4
Q ss_pred cCCCEEEEccCCCCcccchhhHHHHHHhhhc------------------C--------ceeeEEEEecCCCCccCHHHHH
Q 025121 187 ASLPILLTHGLCDDVVPYKYGEKSANCLSIS------------------G--------FRHLTFKSFEGLGHYTVPKEMD 240 (257)
Q Consensus 187 ~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~------------------~--------~~~~~~~~~~g~~H~~~~~~~~ 240 (257)
...+||+.+|+.|-+||....+.+.+.++-. + ..+.+++.+.++||.+..+.++
T Consensus 326 ~~irVLIysGd~D~~~p~~Gte~~i~~L~w~~~~~f~~~~~~~w~~~~~~~~aG~~~~~~nltf~~V~~AGHmvP~d~P~ 405 (421)
T d1wpxa1 326 QDLPILVYAGDKDFICNWLGNKAWTDVLPWKYDEEFASQKVRNWTASITDEVAGEVKSYKHFTYLRVFNGGHMVPFDVPE 405 (421)
T ss_dssp TTCCEEEEEETTCSTTCHHHHHHHHHHCCSTTHHHHHHSCCEEEECTTTCSEEEEEEEETTEEEEEETTCCSSHHHHCHH
T ss_pred cCCeEEEEeCCcCccCCchhHHHHHHhCCCCcccchhcCcccceeecCCCeEEEEEEEECCeEEEEECCccccCcccCHH
Confidence 3689999999999999998888887776410 0 0246888999999999877666
Q ss_pred HHHHHHHHhcC
Q 025121 241 EVCNWLTARLG 251 (257)
Q Consensus 241 ~~~~~l~~~l~ 251 (257)
...+.+.+++.
T Consensus 406 ~a~~m~~~fi~ 416 (421)
T d1wpxa1 406 NALSMVNEWIH 416 (421)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhc
Confidence 66666655553
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=98.38 E-value=2.3e-07 Score=75.25 Aligned_cols=124 Identities=13% Similarity=0.012 Sum_probs=76.6
Q ss_pred EEeCCCCCCceEEEEEccCCCC---ccchHHHh-hcCCCCceEEEccCCCCCCcccCCCCcccccccCCCC--CCCCCCc
Q 025121 25 HVVRPKGKHQATIVWLHGLGDN---GSSWSQLL-ESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGEL--SDDGPED 98 (257)
Q Consensus 25 ~~~~~~~~~~~~vi~~HG~~~~---~~~~~~~~-~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~--~~~~~~~ 98 (257)
+.+...+++.|++||+||.+-. ...+..-. ..+.+.+..||.+++|.-.++... .... .......
T Consensus 87 ~~P~~~~~~lPV~v~ihGG~~~~g~~~~~~~~~~~~~~~~~vVvV~~nYRlg~~GFl~---------~~~~~~~~~gN~G 157 (483)
T d1qe3a_ 87 FAPDTPSQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLH---------LSSFDEAYSDNLG 157 (483)
T ss_dssp EEECSSCCSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCC---------CTTTCTTSCSCHH
T ss_pred EECCCCCCCCceEEEEeecccccCCccccccccccccccCceEEEeecccccchhhcc---------ccccccccccccc
Confidence 3333445678999999996532 22221111 122235799999998853332211 1111 1112233
Q ss_pred hhhHHHHHHHHHHHhccCCC-CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCC
Q 025121 99 WEGLDASAAHIANLLSTEPA-DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWL 166 (257)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 166 (257)
..+...+++++.+.|..... +++|.|+|+|.||..+..++... .....+..+|+.||..
T Consensus 158 l~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp---------~~~gLF~raI~~SGs~ 217 (483)
T d1qe3a_ 158 LLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMP---------AAKGLFQKAIMESGAS 217 (483)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCG---------GGTTSCSEEEEESCCC
T ss_pred cHHHHHHHHHHHHHHHHcCCCcccceeeccccccchhhhhhccc---------ccCCcceeeccccCCc
Confidence 45566677777788877654 46999999999999988887742 2245789999998853
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.38 E-value=1.3e-07 Score=73.61 Aligned_cols=110 Identities=16% Similarity=0.071 Sum_probs=63.3
Q ss_pred CceEEEEEccCCCCcc-------chHH----HhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhh
Q 025121 33 HQATIVWLHGLGDNGS-------SWSQ----LLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEG 101 (257)
Q Consensus 33 ~~~~vi~~HG~~~~~~-------~~~~----~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 101 (257)
.+.+|||+||+.+-.. .|.. +.+.|...|+.|+++..+. ....+..
T Consensus 6 ~~yPIVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p-----------------------~~S~~~R 62 (388)
T d1ku0a_ 6 NDAPIVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGP-----------------------LSSNWDR 62 (388)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCS-----------------------SBCHHHH
T ss_pred CCCCEEEeCCcccCCccccCcccccCCchhhhHHHHHhCCCEEEEeccCC-----------------------ccCHHHH
Confidence 3457999999765432 2433 5666777899999988541 0111223
Q ss_pred HHHHHHHHHHHhccC------------------------CCCceEEEEEechhHHHHHHHHHhccccCC-----------
Q 025121 102 LDASAAHIANLLSTE------------------------PADVKVGIGGFSMGAAVALYSATCCALGRY----------- 146 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~------------------------~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~----------- 146 (257)
..+...+|...+... ....||.||||||||..+-.++...+....
T Consensus 63 A~eL~~~I~~~~~d~G~~hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l~~~~~~~~~~~~~~~~ 142 (388)
T d1ku0a_ 63 ACEAYAQLVGGTVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLLENGSQEEREYAKEHNV 142 (388)
T ss_dssp HHHHHHHHHCEEEECCHHHHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTC
T ss_pred HHHHHHHHhhhhhhhhHhHHhhhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHhcccccccccccccccc
Confidence 333333433221110 112489999999999999888875432100
Q ss_pred ---CCCCCcccccceEEEeccC
Q 025121 147 ---GNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 147 ---~~~~~~~~~~~~~i~~~~~ 165 (257)
+-.......|+.+..++.+
T Consensus 143 ~~~~l~~~~~~~V~SvTTIsTP 164 (388)
T d1ku0a_ 143 SLSPLFEGGHRFVLSVTTIATP 164 (388)
T ss_dssp CCCGGGTCCCCCEEEEEEESCC
T ss_pred ccccccccCCcceEEEEeccCC
Confidence 0001123478899988864
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=98.34 E-value=1.5e-05 Score=64.28 Aligned_cols=65 Identities=20% Similarity=0.143 Sum_probs=50.7
Q ss_pred cCCCEEEEccCCCCcccchhhHHHHHHhhhc----------------------------Cc----eeeEEEEecCCCCcc
Q 025121 187 ASLPILLTHGLCDDVVPYKYGEKSANCLSIS----------------------------GF----RHLTFKSFEGLGHYT 234 (257)
Q Consensus 187 ~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~----------------------------~~----~~~~~~~~~g~~H~~ 234 (257)
..++|||.+|+.|-+|+.-..+.+.+.|+-. |. ++.++..+.++||++
T Consensus 371 ~girVLIy~Gd~D~icn~~Gte~~i~~L~w~g~~~f~~~~~~~~w~~~~~~~~~~~~vaG~~~~~~nltf~~V~~AGHmv 450 (483)
T d1ac5a_ 371 SGIEIVLFNGDKDLICNNKGVLDTIDNLKWGGIKGFSDDAVSFDWIHKSKSTDDSEEFSGYVKYDRNLTFVSVYNASHMV 450 (483)
T ss_dssp TTCEEEEEEETTCSTTCHHHHHHHHHHCEETTEESSCTTCEEEEEEECSSTTCCCCSCCEEEEEETTEEEEEETTCCSSH
T ss_pred CCCEEEEEECChhhcCCCHHHHHHHHhCCCccccccccCccccccccccccccCCcEEEEEEEEeCCeEEEEECCccccC
Confidence 3579999999999999998888888887410 10 257899999999999
Q ss_pred CHHHHHHHHHHHHHhcC
Q 025121 235 VPKEMDEVCNWLTARLG 251 (257)
Q Consensus 235 ~~~~~~~~~~~l~~~l~ 251 (257)
..+.++...+.|.++++
T Consensus 451 P~dqP~~a~~mi~~fl~ 467 (483)
T d1ac5a_ 451 PFDKSLVSRGIVDIYSN 467 (483)
T ss_dssp HHHCHHHHHHHHHHHTT
T ss_pred cccCHHHHHHHHHHHhC
Confidence 87777776666666654
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.31 E-value=3.8e-07 Score=74.90 Aligned_cols=115 Identities=17% Similarity=0.117 Sum_probs=73.0
Q ss_pred CCceEEEEEccCCC---CccchHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHHHH
Q 025121 32 KHQATIVWLHGLGD---NGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAH 108 (257)
Q Consensus 32 ~~~~~vi~~HG~~~---~~~~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 108 (257)
.+.|++||+||.+- +...+.. ...++..+..||.+++|.-.++. ...............+...++++
T Consensus 111 ~~lPV~v~ihGG~~~~gs~~~~~~-~~~~~~~~vIvVt~nYRLg~~GF---------l~~~~~~~~gN~Gl~Dq~~AL~W 180 (532)
T d2h7ca1 111 NRLPVMVWIHGGGLMVGAASTYDG-LALAAHENVVVVTIQYRLGIWGF---------FSTGDEHSRGNWGHLDQVAALRW 180 (532)
T ss_dssp CCEEEEEEECCSTTTSCCSTTSCC-HHHHHHHTCEEEEECCCCHHHHH---------CCCSSTTCCCCHHHHHHHHHHHH
T ss_pred CCcEEEEEEeCCcccccccccCCc-hhhhhcCceEEEEEeeccCCCcc---------ccccccccccccccHHHHHHHHH
Confidence 45799999999653 2222321 11223578999999987532221 21122222223344556666777
Q ss_pred HHHHhccCCC-CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025121 109 IANLLSTEPA-DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 109 ~~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
+.+.|..... +++|.|+|+|.||..+..++... .....+..+|+.||.
T Consensus 181 V~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp---------~~~~LF~raI~~SG~ 229 (532)
T d2h7ca1 181 VQDNIASFGGNPGSVTIFGESAGGESVSVLVLSP---------LAKNLFHRAISESGV 229 (532)
T ss_dssp HHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCG---------GGTTSCSEEEEESCC
T ss_pred HHHHHHHhcCCcceeeeeccccccchHHHHHhhh---------hccCcchhhhhhccc
Confidence 7788877654 46999999999999988887732 224568888888874
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.30 E-value=8.9e-07 Score=72.53 Aligned_cols=123 Identities=14% Similarity=0.078 Sum_probs=74.2
Q ss_pred EEeCCCCCCceEEEEEccCCCC---ccchHHHhhcC-CCCceEEEccCCCCCCcccCCCCcccccccCC-CCCCCCCCch
Q 025121 25 HVVRPKGKHQATIVWLHGLGDN---GSSWSQLLESL-PLPNIKWICPTAPTRPVAILGGFPCTAWFDVG-ELSDDGPEDW 99 (257)
Q Consensus 25 ~~~~~~~~~~~~vi~~HG~~~~---~~~~~~~~~~l-~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~-~~~~~~~~~~ 99 (257)
+.+....++.|++||+||.+-. ......-...+ +..+..||.+++|.--++ |.... ..........
T Consensus 95 ~~P~~~~~~~PV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vVvVt~nYRlg~~G---------fl~~~~~~~~~gN~Gl 165 (526)
T d1p0ia_ 95 WIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALG---------FLALPGNPEAPGNMGL 165 (526)
T ss_dssp EEESSCCSSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHH---------HCCCTTCTTSCSCHHH
T ss_pred EeCCCCCCCCceEEEEECCCcccccCcccccCccccccccceeEEeccccccccc---------ccCCCCcccccccccc
Confidence 3444444577999999996532 22211111111 236899999998753221 11111 1111222335
Q ss_pred hhHHHHHHHHHHHhccCCC-CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025121 100 EGLDASAAHIANLLSTEPA-DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
.+...+++++.+.|..... +++|.|+|+|.||..+..++... .....+..+|..|+.
T Consensus 166 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp---------~~~~lf~~aI~~Sg~ 223 (526)
T d1p0ia_ 166 FDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSP---------GSHSLFTRAILQSGS 223 (526)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCG---------GGGGGCSEEEEESCC
T ss_pred cchhhhhhhHHHHHHHhhcCchheeehhhccccceeeccccCC---------cchhhhhhhhccccc
Confidence 5566677777788877654 46999999999999988777632 234568888888764
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=98.28 E-value=5.9e-07 Score=73.74 Aligned_cols=117 Identities=14% Similarity=0.052 Sum_probs=72.5
Q ss_pred CCCCceEEEEEccCCCC---cc--chHHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCC-CCCCCCCCchhhHH
Q 025121 30 KGKHQATIVWLHGLGDN---GS--SWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVG-ELSDDGPEDWEGLD 103 (257)
Q Consensus 30 ~~~~~~~vi~~HG~~~~---~~--~~~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~-~~~~~~~~~~~~~~ 103 (257)
..++.|++||+||.+-. .. .+.. ...++..+..||.+++|.-.++.. ... ...........+..
T Consensus 102 ~~~~lPV~v~ihGG~~~~g~~~~~~~~~-~~~~~~~~vvvVt~nYRlg~~GFl---------~~~~~~~~~gN~Gl~Dq~ 171 (532)
T d1ea5a_ 102 RPKSTTVMVWIYGGGFYSGSSTLDVYNG-KYLAYTEEVVLVSLSYRVGAFGFL---------ALHGSQEAPGNVGLLDQR 171 (532)
T ss_dssp CCSSEEEEEEECCSTTTCCCTTCGGGCT-HHHHHHHTCEEEECCCCCHHHHHC---------CCTTCSSSCSCHHHHHHH
T ss_pred CCCCCcEEEEEEcCCcccccCCccccCc-chhhcccCccEEEEeecccccccc---------ccccccCCCCcccchhHH
Confidence 34567999999996521 11 1221 112234689999999875322221 111 11112222355566
Q ss_pred HHHHHHHHHhccCCC-CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025121 104 ASAAHIANLLSTEPA-DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
.+++++.+.|..... +++|.|+|+|.||..+..++... .....+..+|+.|+.
T Consensus 172 ~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp---------~~~~lF~~aI~~Sg~ 225 (532)
T d1ea5a_ 172 MALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSP---------GSRDLFRRAILQSGS 225 (532)
T ss_dssp HHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCH---------HHHTTCSEEEEESCC
T ss_pred HHHHHHHHHHHhhcCCccceEeeeecccccchhhhccCc---------cchhhhhhheeeccc
Confidence 677777788877654 46999999999999888887732 124568889988864
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.19 E-value=2e-06 Score=71.22 Aligned_cols=117 Identities=12% Similarity=0.074 Sum_probs=71.6
Q ss_pred CCceEEEEEccCCC---Cccc--hH----HHhhcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhh
Q 025121 32 KHQATIVWLHGLGD---NGSS--WS----QLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEG 101 (257)
Q Consensus 32 ~~~~~vi~~HG~~~---~~~~--~~----~~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~ 101 (257)
++.|++||+||.+- +... +. .-...|+ ..+..||.+++|.-.++. ...............+
T Consensus 96 ~~lPV~V~iHGG~f~~Gs~~~~~~~~~~~~dg~~la~~~~vIvVt~nYRlg~~GF---------l~~~~~~~~gN~Gl~D 166 (579)
T d2bcea_ 96 HDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGF---------LSTGDSNLPGNYGLWD 166 (579)
T ss_dssp CSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHH---------CCCSSTTCCCCHHHHH
T ss_pred CCCcEEEEECCCcccCCCCCCcccCCccccchhhhhccCCEEEEeeccccccccc---------ccccccCCCccchhhH
Confidence 46799999999652 2211 10 0012222 246899999987532222 1111222222333556
Q ss_pred HHHHHHHHHHHhccCCC-CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCC
Q 025121 102 LDASAAHIANLLSTEPA-DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWL 166 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 166 (257)
...+++++.+.|..... +++|.|+|+|.||..+..++... .....+..+|+.||..
T Consensus 167 q~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp---------~~~gLF~raI~~SGs~ 223 (579)
T d2bcea_ 167 QHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSP---------YNKGLIKRAISQSGVG 223 (579)
T ss_dssp HHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCG---------GGTTTCSEEEEESCCT
T ss_pred HHHHHHHHhhhhhhhccCcCceEeeecccccchhhhhhhhh---------cccCccccceeccCCc
Confidence 66677777888877654 46999999999999988877632 2356789999998743
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.16 E-value=9.3e-07 Score=72.70 Aligned_cols=117 Identities=15% Similarity=0.052 Sum_probs=71.9
Q ss_pred CCCceEEEEEccCCC---CccchHHHhhcC-CCCceEEEccCCCCCCcccCCCCcccccccCC-CCCCCCCCchhhHHHH
Q 025121 31 GKHQATIVWLHGLGD---NGSSWSQLLESL-PLPNIKWICPTAPTRPVAILGGFPCTAWFDVG-ELSDDGPEDWEGLDAS 105 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~---~~~~~~~~~~~l-~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~-~~~~~~~~~~~~~~~~ 105 (257)
.++.|++||+||.+- +......-...+ +..+..||.+++|.-.++.. ... ...........+...+
T Consensus 109 ~~~lPV~v~ihGG~~~~gs~~~~~~~~~~~~~~~~vvvVt~nYRlg~~Gfl---------~~~~~~~~~gN~Gl~Dq~~A 179 (542)
T d2ha2a1 109 ASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFL---------ALPGSREAPGNVGLLDQRLA 179 (542)
T ss_dssp SSCEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHC---------CCTTCSSCCSCHHHHHHHHH
T ss_pred CCCCcEEEEEEECccccccCcccccCchhhhhhccceeEeeeeeccceeee---------cccccccCCCcCCcccHHHH
Confidence 356799999999652 222211111112 23689999999875322221 111 1111122235556666
Q ss_pred HHHHHHHhccCCC-CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025121 106 AAHIANLLSTEPA-DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 106 ~~~~~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
++++.+.|..... +++|.|+|+|.||..+..++... .....+..+|+.||.
T Consensus 180 L~WV~~nI~~FGGDP~~VTi~G~SAGa~sv~~ll~sp---------~~~~LF~~aI~~SG~ 231 (542)
T d2ha2a1 180 LQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSL---------PSRSLFHRAVLQSGT 231 (542)
T ss_dssp HHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSH---------HHHTTCSEEEEESCC
T ss_pred HHHHHHHHHHhhcCccccccccccccccchhhhhhhh---------hhhHHhhhheeeccc
Confidence 7777788877654 46999999999999999887742 124578889988874
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=98.13 E-value=2e-06 Score=70.21 Aligned_cols=121 Identities=12% Similarity=0.141 Sum_probs=72.0
Q ss_pred CCceEEEEEccCC---CCccch--HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025121 32 KHQATIVWLHGLG---DNGSSW--SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 32 ~~~~~vi~~HG~~---~~~~~~--~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
++.|++||+||.+ ++...+ ...... ...+..||.+++|.-.++..... +. ...........+...++
T Consensus 95 ~~~PV~v~ihGG~~~~G~~~~~~~~~~~~~-~~~~vVvVt~nYRlg~~GFl~~~------~~-~~~~~~N~Gl~Dq~~AL 166 (517)
T d1ukca_ 95 SKLPVWLFIQGGGYAENSNANYNGTQVIQA-SDDVIVFVTFNYRVGALGFLASE------KV-RQNGDLNAGLLDQRKAL 166 (517)
T ss_dssp CCEEEEEEECCSTTTSCCSCSCCCHHHHHH-TTSCCEEEEECCCCHHHHHCCCH------HH-HHSSCTTHHHHHHHHHH
T ss_pred CCceEEEEEcCCccccCCCccccchhhhhh-hccccceEEEEecccceeecCcc------cc-ccccccchhHHHHHHHH
Confidence 4569999999965 222222 222222 24678999999875322221110 00 00001122345566677
Q ss_pred HHHHHHhccCCC-CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCC
Q 025121 107 AHIANLLSTEPA-DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP 167 (257)
Q Consensus 107 ~~~~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 167 (257)
+++.+.|..... +++|.|+|+|.||..+...+.... ......+.++|+.||...
T Consensus 167 ~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s~~-------~~~~gLF~raI~qSg~~~ 221 (517)
T d1ukca_ 167 RWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYG-------GKDEGLFIGAIVESSFWP 221 (517)
T ss_dssp HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGG-------TCCCSSCSEEEEESCCCC
T ss_pred HHHHHHHHhhcCCcccccccccccchhhHHHHHhccc-------cccccccceeeecccccc
Confidence 778888887654 469999999999998876654210 011347899999998643
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.05 E-value=3.1e-06 Score=70.01 Aligned_cols=124 Identities=10% Similarity=-0.066 Sum_probs=69.8
Q ss_pred CCCceEEEEEccCCC---CccchHHHhhcCC-CCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025121 31 GKHQATIVWLHGLGD---NGSSWSQLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~---~~~~~~~~~~~l~-~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
.++.|++||+||.+- +......-...|+ ..+..||.+++|.--++......... ..............+...++
T Consensus 136 ~~~lPV~V~ihGG~f~~Gs~~~~~~~~~~l~~~~~vVvVtinYRlg~fGFl~~~~~~~--~~~~~~~~gN~Gl~Dq~~AL 213 (571)
T d1dx4a_ 136 TNGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMP--SEFAEEAPGNVGLWDQALAI 213 (571)
T ss_dssp CSSEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSC--GGGTTSSCSCHHHHHHHHHH
T ss_pred CCCCeEEEEEeCCCccCCCCcccccchhhhhhcCCeeEEeecceeccccccccccccc--cccccCCCCcccchHHHHHH
Confidence 356799999999652 2221111112222 24688899998754322221100000 00001111222344555566
Q ss_pred HHHHHHhccCCC-CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025121 107 AHIANLLSTEPA-DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 107 ~~~~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
+++.+.|..... +++|.|+|+|.||..+..++... .....+..+|..|+.
T Consensus 214 ~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp---------~~~~lf~~aI~~Sg~ 264 (571)
T d1dx4a_ 214 RWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSP---------VTRGLVKRGMMQSGT 264 (571)
T ss_dssp HHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCT---------TTTTSCCEEEEESCC
T ss_pred HHHHHhhhhhccCCCceEeccccCccceeeeeeccc---------cccccccccceeccc
Confidence 666677766543 46999999999999998877632 234568888888774
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=98.04 E-value=5e-06 Score=68.26 Aligned_cols=124 Identities=15% Similarity=0.105 Sum_probs=71.9
Q ss_pred CCceEEEEEccCCCCcc---ch--HHH-hhcC-CCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHH
Q 025121 32 KHQATIVWLHGLGDNGS---SW--SQL-LESL-PLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDA 104 (257)
Q Consensus 32 ~~~~~vi~~HG~~~~~~---~~--~~~-~~~l-~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~ 104 (257)
++.|++||+||.+-... .+ ..+ ...+ +..+..||.+++|.-.++...... . ...........+...
T Consensus 120 ~~lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~~~vIvVt~nYRlg~~Gfl~~~~------~-~~~~~gN~Gl~Dq~~ 192 (544)
T d1thga_ 120 AKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFLGGDA------I-TAEGNTNAGLHDQRK 192 (544)
T ss_dssp CCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHH------H-HHHTCTTHHHHHHHH
T ss_pred CCCCEEEEeccCCCccCCCccCCcchhhhhhhhccCCeEEEecccccccccccCCch------h-hccccccHHHHHhhh
Confidence 46799999999663322 11 111 1222 357899999998753222211100 0 000112233556666
Q ss_pred HHHHHHHHhccCCC-CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025121 105 SAAHIANLLSTEPA-DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 105 ~~~~~~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
+++++.+.|..... +++|.|+|+|.||..+..++....... .......+..+|+.||.
T Consensus 193 AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~---~~~s~gLF~raI~qSG~ 251 (544)
T d1thga_ 193 GLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDN---TYNGKKLFHSAILQSGG 251 (544)
T ss_dssp HHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCC---EETTEESCSEEEEESCC
T ss_pred hhhhhhhhhcccccCCCceEeeeeccchHHHHHHHhCcCCCc---ccchhhhhccccccccc
Confidence 77788888887654 469999999999987777765320000 00013478899998874
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=97.99 E-value=7e-06 Score=67.23 Aligned_cols=125 Identities=18% Similarity=0.134 Sum_probs=70.8
Q ss_pred CCCceEEEEEccCCC---Cccch--HHHh--hcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHH
Q 025121 31 GKHQATIVWLHGLGD---NGSSW--SQLL--ESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLD 103 (257)
Q Consensus 31 ~~~~~~vi~~HG~~~---~~~~~--~~~~--~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~ 103 (257)
+++.|+|||+||.+- +...| ..+. ..+...+..||.+++|.-.++....... ...........+..
T Consensus 111 ~~~~PVlv~ihGG~f~~g~~~~~~~~~~~~~~~~~~~~vIvVt~nYRLg~~GFl~~~~~-------~~~~~gN~Gl~Dq~ 183 (534)
T d1llfa_ 111 GANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDI-------KAEGSGNAGLKDQR 183 (534)
T ss_dssp TCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHH-------HHHTCTTHHHHHHH
T ss_pred CCCCeEEEEECCCccccCCCCCCCchhccchhhhccCCeEEEEeecCCCcccccCCccc-------ccccccccchhHHH
Confidence 357899999999663 22222 1222 2334679999999988532222111000 00001122344556
Q ss_pred HHHHHHHHHhccCCC-CceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccC
Q 025121 104 ASAAHIANLLSTEPA-DVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~-~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 165 (257)
.+++++.+.|..... +++|.|+|+|.||..+...+....... ...-...+.++|+.||.
T Consensus 184 ~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~---sp~s~gLF~raI~qSGs 243 (534)
T d1llfa_ 184 LGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDN---TYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp HHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCC---EETTEESCSEEEEESCC
T ss_pred HHHHHHHhhhhhhccCCcceeeeeecchHHHHHHHHhcccccc---ccchhhhhhhhhhccCc
Confidence 667777788877643 469999999999997765553110000 00112358889988874
|
| >d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Cutinase species: Fungus (Fusarium solani), subsp. pisi [TaxId: 169388]
Probab=97.00 E-value=0.0049 Score=42.72 Aligned_cols=168 Identities=13% Similarity=0.041 Sum_probs=89.7
Q ss_pred ceEEEEEccCCCCccc------h-HHHhhcCCCCceEEEccCCCCCCcccCCCCcccccccCCCCCCCCCCchhhHHHHH
Q 025121 34 QATIVWLHGLGDNGSS------W-SQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASA 106 (257)
Q Consensus 34 ~~~vi~~HG~~~~~~~------~-~~~~~~l~~~g~~v~~~d~~~~g~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~ 106 (257)
.-.||+.-|-++.... + ..+...+......+..++.+..-. . ..... .............
T Consensus 17 dv~vi~aRGT~E~~~~G~~g~~~~~~l~~~~~~~~v~~~~v~~~y~a~-----~-----~~~~~---~~~s~~~G~~~~~ 83 (197)
T d1cexa_ 17 DVIFIYARGSTETGNLGTLGPSIASNLESAFGKDGVWIQGVGGAYRAT-----L-----GDNAL---PRGTSSAAIREML 83 (197)
T ss_dssp SEEEEEECCTTCCTTTTTTHHHHHHHHHHHHCTTTEEEEECCTTCCCC-----G-----GGGGS---TTSSCHHHHHHHH
T ss_pred CeEEEEecCCCCCCCCCcccHHHHHHHHHhcCCCcceEeeeccccccc-----c-----ccccc---cccchhHHHHHHH
Confidence 3477778777665432 1 123333344566676676553210 0 00000 0112244555566
Q ss_pred HHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCCCCCCCcccccceEEEeccCCCCchhhhhccccchHHHhhh
Q 025121 107 AHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRA 186 (257)
Q Consensus 107 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (257)
..+.++.++- ++.|++|+|+|+|+.++-.++...+ ....++|.++++++-....... ..+. ..
T Consensus 84 ~~i~~~a~~C-P~tkiVL~GYSQGA~V~~~~~~~l~-------~~~~~~V~avvlfGDP~~~~~~--g~~p-------~~ 146 (197)
T d1cexa_ 84 GLFQQANTKC-PDATLIAGGYSQGAALAAASIEDLD-------SAIRDKIAGTVLFGYTKNLQNR--GRIP-------NY 146 (197)
T ss_dssp HHHHHHHHHC-TTCEEEEEEETHHHHHHHHHHHHSC-------HHHHTTEEEEEEESCTTTTTTT--TCCT-------TS
T ss_pred HHHHHHHhhC-CCCeEEEeeeccccHhhhcccccCC-------hhhhhhEEEEEEEeCCCCCCCC--CCCC-------CC
Confidence 6666665544 3449999999999999998887431 1225678999888643211110 0000 00
Q ss_pred cCCCEEEEccCCCCcccchhhHHHHHHhhhcCceeeEEEEecCCCCccCHHH-HHHHHHHHHHhcC
Q 025121 187 ASLPILLTHGLCDDVVPYKYGEKSANCLSISGFRHLTFKSFEGLGHYTVPKE-MDEVCNWLTARLG 251 (257)
Q Consensus 187 ~~~P~l~~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~g~~H~~~~~~-~~~~~~~l~~~l~ 251 (257)
..-.+.-++-..|.++.... +. -..|.--... .+...+|+.+.++
T Consensus 147 ~~~r~~~~C~~gD~vC~~g~--------------~~------~~~H~~Y~~~~~~~Aa~fv~~k~~ 192 (197)
T d1cexa_ 147 PADRTKVFCNTGDLVCTGSL--------------IV------AAPHLAYGPDARGPAPEFLIEKVR 192 (197)
T ss_dssp CGGGEEEECCTTCGGGGTCC--------------CC------CGGGGCCHHHHHTHHHHHHHHHHH
T ss_pred cchhhheecCCCCCeeCCCC--------------CC------ccchhchhhchhhHHHHHHHHHHh
Confidence 11236777788888876311 10 0246644333 3568888887765
|
| >d1uwca_ c.69.1.17 (A:) Feruloyl esterase A {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Feruloyl esterase A species: Aspergillus niger [TaxId: 5061]
Probab=96.76 E-value=0.0022 Score=46.77 Aligned_cols=23 Identities=30% Similarity=0.449 Sum_probs=20.1
Q ss_pred CceEEEEEechhHHHHHHHHHhc
Q 025121 119 DVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 119 ~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
+.++.+.|||+||.+|..++...
T Consensus 124 ~~~i~vTGHSLGGAlA~L~a~~l 146 (261)
T d1uwca_ 124 DYALTVTGHSLGASMAALTAAQL 146 (261)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHH
T ss_pred CcceEEeccchhHHHHHHHHHHH
Confidence 34999999999999999988754
|
| >d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus [TaxId: 4844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizopus niveus [TaxId: 4844]
Probab=96.68 E-value=0.0012 Score=48.30 Aligned_cols=33 Identities=30% Similarity=0.400 Sum_probs=23.9
Q ss_pred HHHHHhccCCCCceEEEEEechhHHHHHHHHHhc
Q 025121 108 HIANLLSTEPADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 108 ~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
.+.+++++.. ..+|.++|||+||.+|..++...
T Consensus 122 ~v~~~~~~~~-~~~i~vtGHSLGGAlA~L~a~~l 154 (265)
T d1lgya_ 122 VVQEQLTAHP-TYKVIVTGHSLGGAQALLAGMDL 154 (265)
T ss_dssp HHHHHHHHCT-TCEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHhhCC-CceEEEEecccchHHHHHHHHHH
Confidence 3344444333 34999999999999999998753
|
| >d1tiba_ c.69.1.17 (A:) Triacylglycerol lipase {Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Thermomyces lanuginosus, formerly Humicola lanuginosa [TaxId: 5541]
Probab=96.67 E-value=0.003 Score=46.24 Aligned_cols=35 Identities=23% Similarity=0.382 Sum_probs=25.0
Q ss_pred HHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhc
Q 025121 106 AAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 106 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
...+.+.+++.. ..++.++|||+||.+|..++...
T Consensus 125 ~~~v~~~~~~~~-~~~i~vtGHSLGGalA~l~a~~l 159 (269)
T d1tiba_ 125 RQKVEDAVREHP-DYRVVFTGHSLGGALATVAGADL 159 (269)
T ss_dssp HHHHHHHHHHCT-TSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC-CcceeeeccchHHHHHHHHHHHH
Confidence 333444444433 34999999999999999999854
|
| >d3tgla_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizomucor miehei [TaxId: 4839]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Rhizomucor miehei [TaxId: 4839]
Probab=96.56 E-value=0.0016 Score=47.61 Aligned_cols=33 Identities=30% Similarity=0.437 Sum_probs=23.9
Q ss_pred HHHHHHhccCCCCceEEEEEechhHHHHHHHHHh
Q 025121 107 AHIANLLSTEPADVKVGIGGFSMGAAVALYSATC 140 (257)
Q Consensus 107 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~ 140 (257)
..+.+.+++.. ..+|.++|||+||.+|..++..
T Consensus 120 ~~i~~~~~~~~-~~~i~vtGHSLGGAlA~L~a~~ 152 (265)
T d3tgla_ 120 ATVLDQFKQYP-SYKVAVTGHSLGGATVLLCALD 152 (265)
T ss_dssp HHHHHHHHHCT-TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHhCC-CceEEEecccchHHHHHHHHHH
Confidence 33444444433 3499999999999999998874
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| >d1tiaa_ c.69.1.17 (A:) Triacylglycerol lipase {Penicillium camembertii [TaxId: 5075]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Penicillium camembertii [TaxId: 5075]
Probab=96.49 E-value=0.0015 Score=48.02 Aligned_cols=23 Identities=39% Similarity=0.426 Sum_probs=20.0
Q ss_pred CceEEEEEechhHHHHHHHHHhc
Q 025121 119 DVKVGIGGFSMGAAVALYSATCC 141 (257)
Q Consensus 119 ~~~i~l~G~S~Gg~~a~~~~~~~ 141 (257)
..++.+.|||+||.+|..++...
T Consensus 136 ~~~i~iTGHSLGGAlA~L~a~~l 158 (271)
T d1tiaa_ 136 NYELVVVGHSLGAAVATLAATDL 158 (271)
T ss_pred CceEEEeccchHHHHHHHHHHHH
Confidence 34999999999999999998754
|
| >d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Trichoderma reesei [TaxId: 51453]
Probab=95.38 E-value=0.11 Score=35.93 Aligned_cols=62 Identities=18% Similarity=0.163 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCC---CCCC----CcccccceEEEecc
Q 025121 102 LDASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRY---GNGI----PYYVNLRAVVGLSG 164 (257)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~---~~~~----~~~~~~~~~i~~~~ 164 (257)
.......+.++.++ ....+++|+|+|+|+.++-.++........ .... ...+++.++++++-
T Consensus 65 ~~~~~~~i~~~~~~-CP~tkivl~GYSQGA~V~~~~l~~~g~~~~~~~~~~~~l~~~~~~~V~avvl~Gd 133 (207)
T d1qoza_ 65 TNAAAAAINNFHNS-CPDTQLVLVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSAVKAAIFMGD 133 (207)
T ss_dssp HHHHHHHHHHHHHH-CTTSEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESC
T ss_pred HHHHHHHHHHHHHh-CCCCeEEEEeeccchHHHHHHHhccCccccccccCCCCCChhhhhcEEEEEEEeC
Confidence 34444444444443 334599999999999999988763211000 0000 11346888888863
|
| >d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium purpurogenum [TaxId: 28575]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Cutinase-like domain: Acetylxylan esterase species: Penicillium purpurogenum [TaxId: 28575]
Probab=93.80 E-value=0.31 Score=33.60 Aligned_cols=61 Identities=13% Similarity=0.035 Sum_probs=34.6
Q ss_pred HHHHHHHHHhccCCCCceEEEEEechhHHHHHHHHHhccccCC-------CCCCCcccccceEEEeccC
Q 025121 104 ASAAHIANLLSTEPADVKVGIGGFSMGAAVALYSATCCALGRY-------GNGIPYYVNLRAVVGLSGW 165 (257)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~~~~~~~~~-------~~~~~~~~~~~~~i~~~~~ 165 (257)
.....+.++.++- ...+++|+|+|+|+.++-.++........ .-.....+++.+++++.-.
T Consensus 67 ~~~~~i~~~~~~C-P~tk~vl~GYSQGA~V~~~~l~~~g~~~~~~~~~~~~l~~~~~~~v~avvl~GdP 134 (207)
T d1g66a_ 67 AVASAVNSFNSQC-PSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDP 134 (207)
T ss_dssp HHHHHHHHHHHHS-TTCEEEEEEETHHHHHHHHHHHCSCBGGGTBCCCSCCSCHHHHHHEEEEEEESCT
T ss_pred HHHHHHHHHHHhC-CCCcEEEEeeccccHHHHHHHhccCCccccccccccCCCchhhhceeeEEEecCC
Confidence 3344444443333 34499999999999999888753211000 0001123468888887643
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