Citrus Sinensis ID: 025125

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------
Protein Sequence
MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQVGEKFVMQVDL
Secondary Structure (PSIPRED)
ccccEEEEEEcccccHHHHHHHHHHHHHccccccccEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEEEEccccHHHHHHHHccccccccccccccccccccEEEEEEEEEcccHHHHHHHHHHcccEEcccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEEccccccHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHcccccccHHHHHHEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHcccHHHccccHHHHEEEEEccHHHHHHHHHHHHHHHHccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccHHcc
Coil and Loop (DISEMBL)
masrywvvslpvqnsAASVWNRLQEQIskhsfdtplyrfnipnlrvgTLDSLLALSDDLVKSNSFVESVSHKIRRQIEELErvsgiessslsvdgvpvdtyltrfvwdeakyptmsplREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINrkqsgslavrdlsnlvkpediitSEHLVTLLAVVPKYSQKDWLASYETLTSyvvprsskllyedneYALYTVTLFGRVADNFRIAAREKGFQVGEKFVMQVDL
Flexible Loop (DISEMBL)
MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKSnsfvesvshkirrQIEElervsgiessslsvdgvpvDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRsqlnainrkqsgslavRDLSNLVKPEDIITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAARekgfqvgekfvmqvdl
Low Complexity Region (SEG)
MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTldsllalsddlVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQVGEKFVMQVDL
Disordered region (IsUnstruct)
****YWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKSNSFVESVSHKIRRQIE*L*********SLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQVGEKFV*****
Disordered Region (DISOPRED)
MASRYWVVSLPVQNSAASVWNR*QEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKSNSFVESVSHKIRRQIEE***********LSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNN**************SLAVRDLSNLVKPEDIITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQVGEKFVMQ*DL
Disordered Region (DISEMBL)
MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQVGEKFVMQVDL
Disordered Region (DISPRO)
*ASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQVGEKFVMQ***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQVGEKFVMQVDL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	257	2.2.26 [Sep-21-2011]
Q9SDS7	375	V-type proton ATPase subu	yes	no	0.961	0.658	0.874	1e-127
Q9SCB9	354	V-type proton ATPase subu	N/A	no	0.961	0.697	0.742	1e-110
Q7T385	383	V-type proton ATPase subu	yes	no	0.953	0.639	0.425	6e-52
Q9U5N1	385	V-type proton ATPase subu	N/A	no	0.980	0.654	0.424	7e-52
Q5RDQ7	382	V-type proton ATPase subu	yes	no	0.953	0.641	0.429	2e-50
Q4R5H9	382	V-type proton ATPase subu	N/A	no	0.953	0.641	0.429	2e-50
P21283	382	V-type proton ATPase subu	yes	no	0.953	0.641	0.429	2e-50
P21282	382	V-type proton ATPase subu	yes	no	0.953	0.641	0.425	7e-50
Q5FVI6	382	V-type proton ATPase subu	yes	no	0.953	0.641	0.425	9e-50
Q9Z1G3	382	V-type proton ATPase subu	yes	no	0.953	0.641	0.425	1e-49

>sp|Q9SDS7|VATC_ARATH V-type proton ATPase subunit C OS=Arabidopsis thaliana GN=VHA-C PE=1 SV=1

 Score =  453 bits (1165), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 216/247 (87%), Positives = 234/247 (94%)

Query: 1   MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLV 60
           M SRYWVVSLPV++SA+S+WNRLQEQISKHSFDTP+YRFNIPNLRVGTLDSLLAL DDL+
Sbjct: 1   MTSRYWVVSLPVKDSASSLWNRLQEQISKHSFDTPVYRFNIPNLRVGTLDSLLALGDDLL 60

Query: 61  KSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLRE 120
           KSNSFVE VS KIRRQIEELER+SG+ES++L+VDGVPVD+YLTRFVWDEAKYPTMSPL+E
Sbjct: 61  KSNSFVEGVSQKIRRQIEELERISGVESNALTVDGVPVDSYLTRFVWDEAKYPTMSPLKE 120

Query: 121 IVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEH 180
           +VD I + VAKIEDDLKVRVAEYNN+R QLNAINRKQSGSLAVRDLSNLVKPEDI+ SEH
Sbjct: 121 VVDNIQSQVAKIEDDLKVRVAEYNNIRGQLNAINRKQSGSLAVRDLSNLVKPEDIVESEH 180

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           LVTLLAVVPKYSQKDWLA YETLT YVVPRSSK L+EDNEYALYTVTLF RVADNFRIAA
Sbjct: 181 LVTLLAVVPKYSQKDWLACYETLTDYVVPRSSKKLFEDNEYALYTVTLFTRVADNFRIAA 240

Query: 241 REKGFQV 247
           REKGFQV
Sbjct: 241 REKGFQV 247

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SCB9|VATC_HORVU V-type proton ATPase subunit C OS=Hordeum vulgare GN=VATC PE=1 SV=1

 Score =  397 bits (1020), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 187/252 (74%), Positives = 219/252 (86%), Gaps = 5/252 (1%)

Query: 1   MASRYWVVSLPV--QNSAA---SVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLAL 55
           MA+RYW+ +LPV   N AA   ++W RLQE IS+HSFDTPLYRF +P+LR GTLDSLLAL
Sbjct: 1   MATRYWIAALPVADDNVAAGKTALWARLQEAISRHSFDTPLYRFTVPDLRPGTLDSLLAL 60

Query: 56  SDDLVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTM 115
           SDDLVKSN F+E VSHKIRRQIE+LER  G+E  +L+VDGVPVD+YLTRFVWDE KYP  
Sbjct: 61  SDDLVKSNIFIEGVSHKIRRQIEDLERAGGVEPGTLTVDGVPVDSYLTRFVWDEGKYPVN 120

Query: 116 SPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDI 175
           +PL+E V  I + VAKIEDD+KVRVAEY NV+SQL AINRKQ+GSLAVRDLSNL+KPED+
Sbjct: 121 APLKETVASIQSQVAKIEDDMKVRVAEYGNVKSQLGAINRKQTGSLAVRDLSNLIKPEDM 180

Query: 176 ITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADN 235
           +TSEHLVTLL++VPKYSQKDWLASYE+L ++VVPRSSK LYEDNEYALYTVTLF +V DN
Sbjct: 181 VTSEHLVTLLSIVPKYSQKDWLASYESLDTFVVPRSSKKLYEDNEYALYTVTLFAKVVDN 240

Query: 236 FRIAAREKGFQV 247
           F++ AREKGFQ+
Sbjct: 241 FKVHAREKGFQI 252

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Hordeum vulgare (taxid: 4513)

>sp|Q7T385|VTC1A_DANRE V-type proton ATPase subunit C 1-A OS=Danio rerio GN=atp6v1c1a PE=2 SV=1

 Score =  204 bits (518), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 105/247 (42%), Positives = 160/247 (64%), Gaps = 2/247 (0%)

Query: 3   SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKS 62
           + +W++S P + +    W++L    ++ +  +   +FNIP+L+VGTLD L+ LSD+L K 
Sbjct: 2   TEFWLISAPGEKTCQQTWDKLMTATTRTNNLSTNNKFNIPDLKVGTLDVLVGLSDELAKL 61

Query: 63  NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
           ++FVESV  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I
Sbjct: 62  DAFVESVVKKVAQYMADVLEDSRDKVQENLLANGVDLVTYVTRFQWDMAKYPIKQSLKNI 121

Query: 122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
            + I   V++I++DLK R + YNN++  L  + RK +GSL  R L+++VK +D ++ SE+
Sbjct: 122 SEIISKQVSQIDNDLKARASAYNNLKGNLQNLERKNAGSLLTRSLADIVKKDDFVLDSEY 181

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           L+TLL VVPK +  DW  +YETL   VVPRS+ LL+ED++  L+TVTLF +  D+FR  A
Sbjct: 182 LITLLVVVPKTNYTDWQRTYETLAEMVVPRSTNLLFEDHDSGLFTVTLFRKAIDDFRHKA 241

Query: 241 REKGFQV 247
           RE  F V
Sbjct: 242 RENKFTV 248

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Danio rerio (taxid: 7955)

>sp|Q9U5N1|VATC_MANSE V-type proton ATPase subunit C OS=Manduca sexta PE=2 SV=1

 Score =  204 bits (518), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 110/259 (42%), Positives = 162/259 (62%), Gaps = 7/259 (2%)

Query: 3   SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKS 62
           S YW++S P   +    W  L +    ++     Y+F IP+L+VGTLD L+ LSDDL K 
Sbjct: 2   SEYWLISAPGDKTCQQTWEALNQATKANNLSLN-YKFPIPDLKVGTLDQLVGLSDDLGKL 60

Query: 63  NSFVESVSHKIRRQIEEL---ERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLR 119
           ++FVE V+ K+ + + E+   +R    E+ + + D +P   YLTRF WD AKYP    LR
Sbjct: 61  DTFVEGVTRKVAQYLGEVLEDQRDKLHENLTANNDDLP--HYLTRFQWDMAKYPIKQSLR 118

Query: 120 EIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITS 178
            I D I   V +I+ DLKV+ + YN ++  L  + +KQ+GSL  R+L++LVK E  I+ S
Sbjct: 119 NIADIISKQVGQIDADLKVKSSAYNALKGNLQNLEKKQTGSLLTRNLADLVKKEHFILDS 178

Query: 179 EHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRI 238
           E+L TLL +VPK    DW A+YE +T  +VPRS++L+++D +Y L+TVTLF +V D F++
Sbjct: 179 EYLTTLLVIVPKSMFNDWNANYEKITDMIVPRSTQLIHQDGDYGLFTVTLFKKVVDEFKL 238

Query: 239 AAREKGFQVGEKFVMQVDL 257
            ARE+ F V E    + DL
Sbjct: 239 HARERKFVVREFAYNEADL 257

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Manduca sexta (taxid: 7130)

>sp|Q5RDQ7|VATC1_PONAB V-type proton ATPase subunit C 1 OS=Pongo abelii GN=ATP6V1C1 PE=2 SV=1

 Score =  199 bits (505), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 106/247 (42%), Positives = 152/247 (61%), Gaps = 2/247 (0%)

Query: 3   SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKS 62
           + +W++S P + +    W +L    SK++      +FNIP+L+VGTLD L+ LSD+L K 
Sbjct: 2   TEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKL 61

Query: 63  NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
           ++FVE V  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I
Sbjct: 62  DAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNI 121

Query: 122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
            + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ SE+
Sbjct: 122 SEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEY 181

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           LVTLL VVPK +  DW+  YETL   VVPRSS +L ED +  L  VTLF +  D+FR  A
Sbjct: 182 LVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKA 241

Query: 241 REKGFQV 247
           RE  F V
Sbjct: 242 RENKFIV 248

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Pongo abelii (taxid: 9601)

>sp|Q4R5H9|VATC1_MACFA V-type proton ATPase subunit C 1 OS=Macaca fascicularis GN=ATP6V1C1 PE=2 SV=1

 Score =  199 bits (505), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 106/247 (42%), Positives = 152/247 (61%), Gaps = 2/247 (0%)

Query: 3   SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKS 62
           + +W++S P + +    W +L    SK++      +FNIP+L+VGTLD L+ LSD+L K 
Sbjct: 2   TEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKL 61

Query: 63  NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
           ++FVE V  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I
Sbjct: 62  DAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNI 121

Query: 122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
            + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ SE+
Sbjct: 122 SEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEY 181

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           LVTLL VVPK +  DW+  YETL   VVPRSS +L ED +  L  VTLF +  D+FR  A
Sbjct: 182 LVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKA 241

Query: 241 REKGFQV 247
           RE  F V
Sbjct: 242 RENKFIV 248

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Macaca fascicularis (taxid: 9541)

>sp|P21283|VATC1_HUMAN V-type proton ATPase subunit C 1 OS=Homo sapiens GN=ATP6V1C1 PE=1 SV=4

 Score =  199 bits (505), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 106/247 (42%), Positives = 152/247 (61%), Gaps = 2/247 (0%)

Query: 3   SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKS 62
           + +W++S P + +    W +L    SK++      +FNIP+L+VGTLD L+ LSD+L K 
Sbjct: 2   TEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKL 61

Query: 63  NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
           ++FVE V  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I
Sbjct: 62  DAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNI 121

Query: 122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
            + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ SE+
Sbjct: 122 SEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEY 181

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           LVTLL VVPK +  DW+  YETL   VVPRSS +L ED +  L  VTLF +  D+FR  A
Sbjct: 182 LVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKA 241

Query: 241 REKGFQV 247
           RE  F V
Sbjct: 242 RENKFIV 248

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Homo sapiens (taxid: 9606)

>sp|P21282|VATC1_BOVIN V-type proton ATPase subunit C 1 OS=Bos taurus GN=ATP6V1C1 PE=1 SV=3

 Score =  197 bits (501), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 105/247 (42%), Positives = 152/247 (61%), Gaps = 2/247 (0%)

Query: 3   SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKS 62
           + +W++S P + +    W +L    +K++      +FNIP+L+VGTLD L+ LSD+L K 
Sbjct: 2   TEFWLISAPGEKTCQQTWEKLHAATTKNNNLAVSSKFNIPDLKVGTLDVLVGLSDELAKL 61

Query: 63  NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
           ++FVE V  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I
Sbjct: 62  DAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNI 121

Query: 122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
            + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ SE+
Sbjct: 122 SEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEY 181

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           LVTLL VVPK +  DW+  YETL   VVPRSS +L ED +  L  VTLF +  D+FR  A
Sbjct: 182 LVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKA 241

Query: 241 REKGFQV 247
           RE  F V
Sbjct: 242 RENKFIV 248

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Bos taurus (taxid: 9913)

>sp|Q5FVI6|VATC1_RAT V-type proton ATPase subunit C 1 OS=Rattus norvegicus GN=Atp6v1c1 PE=2 SV=1

 Score =  197 bits (500), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 105/247 (42%), Positives = 151/247 (61%), Gaps = 2/247 (0%)

Query: 3   SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKS 62
           + +W++S P + +    W +L    +K++      +FNIP+L+VGTLD L+ LSD+L K 
Sbjct: 2   TEFWLISAPGEKTCQQTWEKLHAATTKNNNLAVSSKFNIPDLKVGTLDVLVGLSDELAKL 61

Query: 63  NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
           ++FVE V  K+ + + + LE        +L   GV + TY+TRF WD AKYP    L+ I
Sbjct: 62  DAFVEGVVKKVAQYMADVLEDSKDKVQENLLASGVDLVTYITRFQWDMAKYPIKQSLKNI 121

Query: 122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
            + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ SE+
Sbjct: 122 SEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEY 181

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           LVTLL VVPK +  DW+  YETL   VVPRSS +L ED +  L  VTLF +  D+FR  A
Sbjct: 182 LVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFKKAVDDFRHKA 241

Query: 241 REKGFQV 247
           RE  F V
Sbjct: 242 RENKFIV 248

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Rattus norvegicus (taxid: 10116)

>sp|Q9Z1G3|VATC1_MOUSE V-type proton ATPase subunit C 1 OS=Mus musculus GN=Atp6v1c1 PE=1 SV=4

 Score =  196 bits (498), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 105/247 (42%), Positives = 151/247 (61%), Gaps = 2/247 (0%)

Query: 3   SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKS 62
           + +W++S P + +    W +L    +K++      +FNIP+L+VGTLD L+ LSD+L K 
Sbjct: 2   TEFWLISAPGEKTCQQTWEKLHAATTKNNNLAVSSKFNIPDLKVGTLDVLVGLSDELAKL 61

Query: 63  NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
           ++FVE V  K+ + + + LE        +L   GV + TY+TRF WD AKYP    L+ I
Sbjct: 62  DAFVEGVVKKVAQYMADVLEDSKDKVQENLLASGVDLVTYITRFQWDMAKYPIKQSLKNI 121

Query: 122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
            + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ SE+
Sbjct: 122 SEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEY 181

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           LVTLL VVPK +  DW+  YETL   VVPRSS +L ED +  L  VTLF +  D+FR  A
Sbjct: 182 LVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKA 241

Query: 241 REKGFQV 247
           RE  F V
Sbjct: 242 RENKFIV 248

Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	257
18391442	375	V-type proton ATPase subunit C [Arabidop	0.961	0.658	0.874	1e-125
297844184	378	de-etiolated 3 [Arabidopsis lyrata subsp	0.961	0.653	0.866	1e-124
255543599	376	vacuolar ATP synthase subunit C, putativ	0.961	0.656	0.914	1e-123
111154399	377	vacuolar H+-ATPase subunit C [Gossypium	0.961	0.655	0.894	1e-120
356498582	375	PREDICTED: V-type proton ATPase subunit	0.961	0.658	0.870	1e-119
224129212	366	predicted protein [Populus trichocarpa]	0.961	0.674	0.886	1e-119
449466048	376	PREDICTED: V-type proton ATPase subunit	0.968	0.662	0.863	1e-118
356559482	375	PREDICTED: V-type proton ATPase subunit	0.961	0.658	0.866	1e-118
242091583	377	hypothetical protein SORBIDRAFT_09g03062	0.961	0.655	0.812	1e-117
226495029	377	LOC100281241 [Zea mays] gi|194698790|gb|	0.961	0.655	0.808	1e-117

>gi|18391442|ref|NP_563916.1| V-type proton ATPase subunit C [Arabidopsis thaliana] gi|12585488|sp|Q9SDS7.1|VATC_ARATH RecName: Full=V-type proton ATPase subunit C; Short=V-ATPase subunit C; AltName: Full=Vacuolar H(+)-ATPase subunit C; AltName: Full=Vacuolar proton pump subunit C gi|6636332|gb|AAF20146.1|AF208261_1 vacuolar ATP synthase subunit C [Arabidopsis thaliana] gi|8698731|gb|AAF78489.1|AC012187_9 Identical to vacuolar ATP sythase subunit C (DET3) from Arabidopsis thaliana gb|AF208261. ESTs gb|AA067533, gb|Z37481, gb|AA721838, gb|Z37180, gb|T21206 come from this gene [Arabidopsis thaliana] gi|12248023|gb|AAG50103.1|AF334725_1 putative vacuolar ATP synthase subunit C [Arabidopsis thaliana] gi|16649005|gb|AAL24354.1| Identical to vacuolar ATP sythase subunit C (DET3) [Arabidopsis thaliana] gi|20259972|gb|AAM13333.1| vacuolar ATP sythase subunit C [Arabidopsis thaliana] gi|225897918|dbj|BAH30291.1| hypothetical protein [Arabidopsis thaliana] gi|332190815|gb|AEE28936.1| V-type proton ATPase subunit C [Arabidopsis thaliana]

 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 216/247 (87%), Positives = 234/247 (94%)

Query: 1   MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLV 60
           M SRYWVVSLPV++SA+S+WNRLQEQISKHSFDTP+YRFNIPNLRVGTLDSLLAL DDL+
Sbjct: 1   MTSRYWVVSLPVKDSASSLWNRLQEQISKHSFDTPVYRFNIPNLRVGTLDSLLALGDDLL 60

Query: 61  KSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLRE 120
           KSNSFVE VS KIRRQIEELER+SG+ES++L+VDGVPVD+YLTRFVWDEAKYPTMSPL+E
Sbjct: 61  KSNSFVEGVSQKIRRQIEELERISGVESNALTVDGVPVDSYLTRFVWDEAKYPTMSPLKE 120

Query: 121 IVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEH 180
           +VD I + VAKIEDDLKVRVAEYNN+R QLNAINRKQSGSLAVRDLSNLVKPEDI+ SEH
Sbjct: 121 VVDNIQSQVAKIEDDLKVRVAEYNNIRGQLNAINRKQSGSLAVRDLSNLVKPEDIVESEH 180

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           LVTLLAVVPKYSQKDWLA YETLT YVVPRSSK L+EDNEYALYTVTLF RVADNFRIAA
Sbjct: 181 LVTLLAVVPKYSQKDWLACYETLTDYVVPRSSKKLFEDNEYALYTVTLFTRVADNFRIAA 240

Query: 241 REKGFQV 247
           REKGFQV
Sbjct: 241 REKGFQV 247

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297844184|ref|XP_002889973.1| de-etiolated 3 [Arabidopsis lyrata subsp. lyrata] gi|297335815|gb|EFH66232.1| de-etiolated 3 [Arabidopsis lyrata subsp. lyrata]

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 214/247 (86%), Positives = 234/247 (94%)

Query: 1   MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLV 60
           M SRYWVVSLPV++SA+++WNRLQEQISKHSFDTP+YRFNIPNLRVGTLDSLLAL DDL+
Sbjct: 1   MTSRYWVVSLPVKDSASTLWNRLQEQISKHSFDTPIYRFNIPNLRVGTLDSLLALGDDLL 60

Query: 61  KSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLRE 120
           KSNSFVE VS KIRRQIEELER+SG+ES++L+VDGVPVD+YLTRFVWDEAKYPTMSPL+E
Sbjct: 61  KSNSFVEGVSQKIRRQIEELERISGVESNALTVDGVPVDSYLTRFVWDEAKYPTMSPLKE 120

Query: 121 IVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEH 180
           +VD I + VAKIEDDLKVRVAEYNN+R QLNAINRKQSGSLAVRDLSNLVKPEDI+ SEH
Sbjct: 121 VVDNIQSQVAKIEDDLKVRVAEYNNIRGQLNAINRKQSGSLAVRDLSNLVKPEDIVVSEH 180

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           LVTLLAVVPKYSQKDWLA YETLT YVVPRSSK L+EDNEYALYTVTLF RVADNFRI+A
Sbjct: 181 LVTLLAVVPKYSQKDWLACYETLTEYVVPRSSKKLFEDNEYALYTVTLFTRVADNFRISA 240

Query: 241 REKGFQV 247
           REKGFQV
Sbjct: 241 REKGFQV 247

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255543599|ref|XP_002512862.1| vacuolar ATP synthase subunit C, putative [Ricinus communis] gi|223547873|gb|EEF49365.1| vacuolar ATP synthase subunit C, putative [Ricinus communis]

 Score =  446 bits (1147), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 226/247 (91%), Positives = 239/247 (96%)

Query: 1   MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLV 60
           MASRYWVVSLPVQNSA+++WNRLQ+QISKHSFDTPLYRFNIPNLRVGTLDSLL+LSDDLV
Sbjct: 1   MASRYWVVSLPVQNSASTLWNRLQDQISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLV 60

Query: 61  KSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLRE 120
           KSNSF+E VSHKIRRQIEELERVSG+ESS+L+VDGVPVD+YLTRFVWDEAKYPT+SPLRE
Sbjct: 61  KSNSFIEGVSHKIRRQIEELERVSGVESSALTVDGVPVDSYLTRFVWDEAKYPTISPLRE 120

Query: 121 IVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEH 180
            VD IHT VAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEH
Sbjct: 121 TVDSIHTQVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEH 180

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           L TLLAVVPKYSQKDWLASYETLTSYVVPRSSK LYEDNEYALYTVTLF RVADNFR +A
Sbjct: 181 LTTLLAVVPKYSQKDWLASYETLTSYVVPRSSKKLYEDNEYALYTVTLFNRVADNFRTSA 240

Query: 241 REKGFQV 247
           REKGFQ+
Sbjct: 241 REKGFQI 247

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|111154399|gb|ABH07428.1| vacuolar H+-ATPase subunit C [Gossypium hirsutum]

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 221/247 (89%), Positives = 239/247 (96%)

Query: 1   MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLV 60
           MASRYWVVSLPVQ+SA+++WN LQ+QISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDL+
Sbjct: 1   MASRYWVVSLPVQSSASTLWNNLQDQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLL 60

Query: 61  KSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLRE 120
           KSN+F+E VSHKIRRQIEELERVSG+E+++L+VDGVPVD+YLTRFVWDEAKYP MSPLRE
Sbjct: 61  KSNTFIEGVSHKIRRQIEELERVSGLETNALTVDGVPVDSYLTRFVWDEAKYPIMSPLRE 120

Query: 121 IVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEH 180
           IVDGIHT VAKIEDDLKVRVAEYNNVR QLNAINRKQSGSLAVRDLSNLVKPEDIITSEH
Sbjct: 121 IVDGIHTQVAKIEDDLKVRVAEYNNVRGQLNAINRKQSGSLAVRDLSNLVKPEDIITSEH 180

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           LVTLLAVVPKYSQKDWL+SYETLT+YVVPRSSK LYEDNEYALYT TLFGRVADNFR +A
Sbjct: 181 LVTLLAVVPKYSQKDWLSSYETLTTYVVPRSSKKLYEDNEYALYTATLFGRVADNFRTSA 240

Query: 241 REKGFQV 247
           RE+GFQV
Sbjct: 241 RERGFQV 247

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356498582|ref|XP_003518129.1| PREDICTED: V-type proton ATPase subunit C-like [Glycine max]

 Score =  432 bits (1112), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 215/247 (87%), Positives = 236/247 (95%)

Query: 1   MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLV 60
           MA+RYWVVSLPVQNSA+++WN+LQEQISKHSFDTPLYRFNIPNLRVGTLDSLL+LSDD V
Sbjct: 1   MATRYWVVSLPVQNSASTLWNKLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDTV 60

Query: 61  KSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLRE 120
           KSNSFVE VSHKIRRQIEELERVSG+ SS L+VDGVPVD+YLTRFVWDEA+YPTMSPL+E
Sbjct: 61  KSNSFVEGVSHKIRRQIEELERVSGVVSSGLTVDGVPVDSYLTRFVWDEARYPTMSPLKE 120

Query: 121 IVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEH 180
           I+DGIH  VAKIEDDLKVRV+EYNN+RSQLNAINRKQ+GSLAVRDLSNLVKPEDIITSE+
Sbjct: 121 IIDGIHGQVAKIEDDLKVRVSEYNNIRSQLNAINRKQTGSLAVRDLSNLVKPEDIITSEN 180

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           L TLLA+VPKYSQKDWL+SYETLT+YVVPRSSK LYEDNEY LYTVTLF RVADNFR +A
Sbjct: 181 LTTLLAIVPKYSQKDWLSSYETLTNYVVPRSSKKLYEDNEYVLYTVTLFSRVADNFRTSA 240

Query: 241 REKGFQV 247
           REKGFQ+
Sbjct: 241 REKGFQI 247

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129212|ref|XP_002328918.1| predicted protein [Populus trichocarpa] gi|222839348|gb|EEE77685.1| predicted protein [Populus trichocarpa]

 Score =  432 bits (1112), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 219/247 (88%), Positives = 237/247 (95%)

Query: 1   MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLV 60
           MASRYW VSLPVQNSA+SVWN LQEQISKHSFDTPLYRFNIPNLRVGTLDSLL+LSDDLV
Sbjct: 1   MASRYWAVSLPVQNSASSVWNNLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLV 60

Query: 61  KSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLRE 120
           +SNSF+E V+ KIRRQIEEL+RVSG+ES++L+VDGVPVD+YLTRFVWDEAKYPTMSPL+E
Sbjct: 61  RSNSFIEGVAQKIRRQIEELQRVSGVESNALTVDGVPVDSYLTRFVWDEAKYPTMSPLKE 120

Query: 121 IVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEH 180
           IVD IHT VAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDII SE+
Sbjct: 121 IVDSIHTQVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIIVSEN 180

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           LVTLLA+VPKYSQKDWLASYETLTSYVVPRSSK LYEDNEYALYTVTLF RVADNFR ++
Sbjct: 181 LVTLLAIVPKYSQKDWLASYETLTSYVVPRSSKKLYEDNEYALYTVTLFHRVADNFRTSS 240

Query: 241 REKGFQV 247
           R+KGFQ+
Sbjct: 241 RDKGFQI 247

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449466048|ref|XP_004150739.1| PREDICTED: V-type proton ATPase subunit C-like [Cucumis sativus] gi|449518489|ref|XP_004166274.1| PREDICTED: V-type proton ATPase subunit C-like [Cucumis sativus]

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 215/249 (86%), Positives = 237/249 (95%)

Query: 1   MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLV 60
           MASRYW+VSLPVQ SA+S+WNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLL+LSDDL+
Sbjct: 1   MASRYWMVSLPVQGSASSLWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLL 60

Query: 61  KSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLRE 120
           KSN+FVE VS KIRRQIEELE+VSG+ES+ L+VDGVPVD+YLTRFVWDEAKYPTMSPLR+
Sbjct: 61  KSNTFVEGVSQKIRRQIEELEKVSGVESNVLTVDGVPVDSYLTRFVWDEAKYPTMSPLRD 120

Query: 121 IVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEH 180
           IVD IH+ VAKIEDDLK+RVAEYNNVRSQLNAINRKQSGSLAVRD+SNLVKPEDIITSEH
Sbjct: 121 IVDSIHSQVAKIEDDLKIRVAEYNNVRSQLNAINRKQSGSLAVRDISNLVKPEDIITSEH 180

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           L TLL ++PKYSQK+WL+SYETLTSYVVPRSSK LYEDNEYALYTVTLF RVADNF+ +A
Sbjct: 181 LATLLVIIPKYSQKEWLSSYETLTSYVVPRSSKKLYEDNEYALYTVTLFNRVADNFKTSA 240

Query: 241 REKGFQVGE 249
           REKGFQ+ E
Sbjct: 241 REKGFQIRE 249

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559482|ref|XP_003548028.1| PREDICTED: V-type proton ATPase subunit C-like [Glycine max]

 Score =  428 bits (1101), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 214/247 (86%), Positives = 237/247 (95%)

Query: 1   MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLV 60
           MA+RYWVVSLPVQNSA+++WN+LQEQISKHSFDTPLYRFNIPNLRVGTLDSLL+LSDDLV
Sbjct: 1   MATRYWVVSLPVQNSASTLWNKLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLV 60

Query: 61  KSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLRE 120
           KSNSFVE VSHKIRRQIEELERVSG+ SS L+VDGVPVD+YLTRFVWDEA+YPTMSPL+E
Sbjct: 61  KSNSFVEGVSHKIRRQIEELERVSGVMSSGLTVDGVPVDSYLTRFVWDEARYPTMSPLKE 120

Query: 121 IVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEH 180
           I+DGIH  VAKIEDDLKVRV+EYNN+RSQLNAINRKQ+GSLAVRDLS+LVKPEDIITSE+
Sbjct: 121 IIDGIHGQVAKIEDDLKVRVSEYNNIRSQLNAINRKQTGSLAVRDLSDLVKPEDIITSEN 180

Query: 181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
           L TLLA+VPKYSQKDWL+SYE LT+YVVPRSSK LYEDNEYALYTVTLF RVADNFR +A
Sbjct: 181 LTTLLAIVPKYSQKDWLSSYEILTNYVVPRSSKKLYEDNEYALYTVTLFSRVADNFRTSA 240

Query: 241 REKGFQV 247
           RE+GFQ+
Sbjct: 241 REEGFQI 247

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242091583|ref|XP_002441624.1| hypothetical protein SORBIDRAFT_09g030620 [Sorghum bicolor] gi|241946909|gb|EES20054.1| hypothetical protein SORBIDRAFT_09g030620 [Sorghum bicolor]

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 203/250 (81%), Positives = 230/250 (92%), Gaps = 3/250 (1%)

Query: 1   MASRYWVVSLPVQN---SAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSD 57
           MA+RYW+VSLPVQ+   +A+S+W+RLQ+ IS+HSFDTPLYRFN+P+LRVGTLDSLLALSD
Sbjct: 1   MATRYWIVSLPVQSPGATASSLWSRLQDSISRHSFDTPLYRFNVPDLRVGTLDSLLALSD 60

Query: 58  DLVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSP 117
           DLVKSN FVE VSHKIRRQIE+LER  G+ES +L+VDGVPVDTYLTRFVWDE KYPTMSP
Sbjct: 61  DLVKSNVFVEGVSHKIRRQIEDLERAGGVESGTLTVDGVPVDTYLTRFVWDEGKYPTMSP 120

Query: 118 LREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIIT 177
           L+EIV  I + VAKIEDD+KVR AEYNNVRSQL+AINRKQSGSLAVRDLSNLVKPED+IT
Sbjct: 121 LKEIVGSIQSQVAKIEDDMKVRAAEYNNVRSQLSAINRKQSGSLAVRDLSNLVKPEDMIT 180

Query: 178 SEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFR 237
           SEHLVTLLA+VPKYSQKDWL+SYETL ++VVPRSSK LYEDNEYALYTVTLF +V DNF+
Sbjct: 181 SEHLVTLLAIVPKYSQKDWLSSYETLDTFVVPRSSKKLYEDNEYALYTVTLFAKVVDNFK 240

Query: 238 IAAREKGFQV 247
           + AREKGFQV
Sbjct: 241 VRAREKGFQV 250

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226495029|ref|NP_001147632.1| LOC100281241 [Zea mays] gi|194698790|gb|ACF83479.1| unknown [Zea mays] gi|195612692|gb|ACG28176.1| vacuolar ATP synthase subunit C [Zea mays] gi|413946711|gb|AFW79360.1| Vacuolar ATP synthase subunit C [Zea mays]

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 202/250 (80%), Positives = 228/250 (91%), Gaps = 3/250 (1%)

Query: 1   MASRYWVVSLPVQNSAA---SVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSD 57
           MA+RYW+VSLPVQ+  A   S+W+RLQ+ IS+HSFDTPLYRFN+P+LRVGTLDSLLALSD
Sbjct: 1   MATRYWIVSLPVQSPGAIASSLWSRLQDSISRHSFDTPLYRFNVPDLRVGTLDSLLALSD 60

Query: 58  DLVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSP 117
           DLVKSN FVE VSHKIRRQIE+LER  G+ES +L+VDGVPVDTYLTRFVWDE KYPTMSP
Sbjct: 61  DLVKSNVFVEGVSHKIRRQIEDLERAGGVESGTLTVDGVPVDTYLTRFVWDEGKYPTMSP 120

Query: 118 LREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIIT 177
           L+EIV  I + VAKIEDD+KVR AEYNNVRSQL+AINRKQSGSLAVRDLSNLVKPED+IT
Sbjct: 121 LKEIVGSIQSQVAKIEDDMKVRAAEYNNVRSQLSAINRKQSGSLAVRDLSNLVKPEDMIT 180

Query: 178 SEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFR 237
           SEHLVTLLA+VPKYSQKDWL+SYETL ++VVPRSSK LYEDNEYALYTVTLF +V DNF+
Sbjct: 181 SEHLVTLLAIVPKYSQKDWLSSYETLDTFVVPRSSKKLYEDNEYALYTVTLFAKVVDNFK 240

Query: 238 IAAREKGFQV 247
           + AREKGFQ+
Sbjct: 241 VRAREKGFQI 250

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	257
TAIR|locus:2010386	375	DET3 "DE-ETIOLATED 3" [Arabido	0.992	0.68	0.812	1.3e-107
ZFIN|ZDB-GENE-030616-612	383	atp6v1c1a "ATPase, H+ transpor	0.953	0.639	0.396	3.4e-45
UNIPROTKB|F1NK97	386	ATP6V1C2 "Uncharacterized prot	0.988	0.658	0.396	3.1e-44
UNIPROTKB|F1P0C1	388	ATP6V1C1 "Uncharacterized prot	0.953	0.631	0.396	3.9e-44
UNIPROTKB|E2RSK6	404	ATP6V1C1 "Uncharacterized prot	0.953	0.606	0.400	8.1e-44
UNIPROTKB|P21283	382	ATP6V1C1 "V-type proton ATPase	0.953	0.641	0.400	8.1e-44
UNIPROTKB|Q4R5H9	382	ATP6V1C1 "V-type proton ATPase	0.953	0.641	0.400	8.1e-44
UNIPROTKB|Q5RDQ7	382	ATP6V1C1 "V-type proton ATPase	0.953	0.641	0.400	8.1e-44
UNIPROTKB|P21282	382	ATP6V1C1 "V-type proton ATPase	0.953	0.641	0.396	2.2e-43
MGI|MGI:1913585	382	Atp6v1c1 "ATPase, H+ transport	0.953	0.641	0.396	2.8e-43

TAIR|locus:2010386 DET3 "DE-ETIOLATED 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
 Identities = 208/256 (81%), Positives = 228/256 (89%)

Query:     1 MASRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXV 60
             M SRYWVVSLPV++SA+S+WNRLQEQISKHSFDTP+YRFNIPNLRVGT           +
Sbjct:     1 MTSRYWVVSLPVKDSASSLWNRLQEQISKHSFDTPVYRFNIPNLRVGTLDSLLALGDDLL 60

Query:    61 KSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLRE 120
             KSNSFVE VS KIRRQIEELER+SG+ES++L+VDGVPVD+YLTRFVWDEAKYPTMSPL+E
Sbjct:    61 KSNSFVEGVSQKIRRQIEELERISGVESNALTVDGVPVDSYLTRFVWDEAKYPTMSPLKE 120

Query:   121 IVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDIITSEH 180
             +VD I + VAKIEDDLKVRVAEYNN+R QLNAINRKQSGSLAVRDLSNLVKPEDI+ SEH
Sbjct:   121 VVDNIQSQVAKIEDDLKVRVAEYNNIRGQLNAINRKQSGSLAVRDLSNLVKPEDIVESEH 180

Query:   181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
             LVTLLAVVPKYSQKDWLA YETLT YVVPRSSK L+EDNEYALYTVTLF RVADNFRIAA
Sbjct:   181 LVTLLAVVPKYSQKDWLACYETLTDYVVPRSSKKLFEDNEYALYTVTLFTRVADNFRIAA 240

Query:   241 REKGFQVGEKFVMQVD 256
             REKGFQV + F   V+
Sbjct:   241 REKGFQVRD-FEQSVE 255

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0016820 "hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances" evidence=IEA

GO:0000221 "vacuolar proton-transporting V-type ATPase, V1 domain" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0046961 "proton-transporting ATPase activity, rotational mechanism" evidence=IGI

GO:0005773 "vacuole" evidence=IDA

GO:0009809 "lignin biosynthetic process" evidence=IGI

GO:0043255 "regulation of carbohydrate biosynthetic process" evidence=IGI

GO:0000325 "plant-type vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0000902 "cell morphogenesis" evidence=RCA

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0007033 "vacuole organization" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009853 "photorespiration" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0016051 "carbohydrate biosynthetic process" evidence=RCA

GO:0030243 "cellulose metabolic process" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0051788 "response to misfolded protein" evidence=RCA

GO:0080129 "proteasome core complex assembly" evidence=RCA

ZFIN|ZDB-GENE-030616-612 atp6v1c1a "ATPase, H+ transporting, lysosomal, V1 subunit C, isoform 1a" [Danio rerio (taxid:7955)]

 Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
 Identities = 98/247 (39%), Positives = 151/247 (61%)

Query:     3 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKS 62
             + +W++S P + +    W++L    ++ +  +   +FNIP+L+VGT            K 
Sbjct:     2 TEFWLISAPGEKTCQQTWDKLMTATTRTNNLSTNNKFNIPDLKVGTLDVLVGLSDELAKL 61

Query:    63 NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
             ++FVESV  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I
Sbjct:    62 DAFVESVVKKVAQYMADVLEDSRDKVQENLLANGVDLVTYVTRFQWDMAKYPIKQSLKNI 121

Query:   122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
              + I   V++I++DLK R + YNN++  L  + RK +GSL  R L+++VK +D ++ SE+
Sbjct:   122 SEIISKQVSQIDNDLKARASAYNNLKGNLQNLERKNAGSLLTRSLADIVKKDDFVLDSEY 181

Query:   181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
             L+TLL VVPK +  DW  +YETL   VVPRS+ LL+ED++  L+TVTLF +  D+FR  A
Sbjct:   182 LITLLVVVPKTNYTDWQRTYETLAEMVVPRSTNLLFEDHDSGLFTVTLFRKAIDDFRHKA 241

Query:   241 REKGFQV 247
             RE  F V
Sbjct:   242 RENKFTV 248

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0033180 "proton-transporting V-type ATPase, V1 domain" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0015992 "proton transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

UNIPROTKB|F1NK97 ATP6V1C2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
 Identities = 102/257 (39%), Positives = 150/257 (58%)

Query:     3 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKS 62
             S +W++S P   +    W R+    SK +  +   +F+IP+L+VGT            K 
Sbjct:     6 SEFWLISAPGDKTNLQAWERMNTVTSKSNLSSNS-KFHIPDLKVGTLDALVGLSDELGKL 64

Query:    63 NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
             ++F ESV  KI + I E +E        +L  +GV + +YLTRF WD AKYP   PL+ I
Sbjct:    65 DTFAESVIKKIVQYIGEVMEDSKDKVQENLLANGVDLISYLTRFEWDMAKYPIKQPLKNI 124

Query:   122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
              + +   V +IE DLK R A YNN++  L  + +K  G+L  R L+++V  ED ++ SE+
Sbjct:   125 SEALAKQVTQIEADLKTRSAAYNNIKGNLQNLEKKTVGNLLTRTLADIVHKEDFVLNSEY 184

Query:   181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
             L+TLL VVPK S   W  +YE+L+  VVPRS+K++ ED E  L+TVTLF +V D+F+  A
Sbjct:   185 LITLLVVVPKSSYVQWQKTYESLSDMVVPRSTKMIAEDAEGGLFTVTLFRKVMDDFKAKA 244

Query:   241 REKGFQVGEKFVMQVDL 257
             RE  F V E +  + +L
Sbjct:   245 RENRFMVREFYFDEKEL 261

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0033180 "proton-transporting V-type ATPase, V1 domain" evidence=IEA

GO:0008553 "hydrogen-exporting ATPase activity, phosphorylative mechanism" evidence=IEA

UNIPROTKB|F1P0C1 ATP6V1C1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
 Identities = 98/247 (39%), Positives = 147/247 (59%)

Query:     3 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKS 62
             + +W++S P + +    W +L    +K++  +   +FNIP+L+VGT            K 
Sbjct:     8 TEFWLISAPGEKTCQQTWEKLHAATTKNNNLSTNSKFNIPDLKVGTLDVLVGLSDELAKL 67

Query:    63 NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
             ++FVESV  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I
Sbjct:    68 DAFVESVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNI 127

Query:   122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
              + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+++VK ED ++ SE+
Sbjct:   128 SEIIAKGVNQIDNDLKARASAYNNLKGNLQNLERKNAGSLLTRSLADIVKKEDFVLDSEY 187

Query:   181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
             LVTLL +VPK +  DW+  YETL   VVPRSS +L+ED +  L  VTLF +  D+F+  A
Sbjct:   188 LVTLLVIVPKVNYNDWVKQYETLAEMVVPRSSNVLFEDQDSYLCNVTLFRKAVDDFKHKA 247

Query:   241 REKGFQV 247
             RE  F V
Sbjct:   248 REYKFLV 254

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0033180 "proton-transporting V-type ATPase, V1 domain" evidence=IEA

UNIPROTKB|E2RSK6 ATP6V1C1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
 Identities = 99/247 (40%), Positives = 143/247 (57%)

Query:     3 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKS 62
             + +W++S P + +    W +L    SK++      +FNIP+L+VGT            K 
Sbjct:     2 TEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVASKFNIPDLKVGTLDVLVGLSDELAKL 61

Query:    63 NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
             ++FVE V  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I
Sbjct:    62 DAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNI 121

Query:   122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
              + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ SE+
Sbjct:   122 SEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEY 181

Query:   181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
             LVTLL VVPK +  DW+  YETL   VVPRSS +L ED +  L  VTLF +  D+FR  A
Sbjct:   182 LVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKA 241

Query:   241 REKGFQV 247
             RE  F V
Sbjct:   242 RENKFIV 248

GO:0033180 "proton-transporting V-type ATPase, V1 domain" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

UNIPROTKB|P21283 ATP6V1C1 "V-type proton ATPase subunit C 1" [Homo sapiens (taxid:9606)]

 Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
 Identities = 99/247 (40%), Positives = 143/247 (57%)

Query:     3 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKS 62
             + +W++S P + +    W +L    SK++      +FNIP+L+VGT            K 
Sbjct:     2 TEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKL 61

Query:    63 NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
             ++FVE V  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I
Sbjct:    62 DAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNI 121

Query:   122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
              + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ SE+
Sbjct:   122 SEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEY 181

Query:   181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
             LVTLL VVPK +  DW+  YETL   VVPRSS +L ED +  L  VTLF +  D+FR  A
Sbjct:   182 LVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKA 241

Query:   241 REKGFQV 247
             RE  F V
Sbjct:   242 RENKFIV 248

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0033180 "proton-transporting V-type ATPase, V1 domain" evidence=IEA

GO:0008553 "hydrogen-exporting ATPase activity, phosphorylative mechanism" evidence=IEA

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0045177 "apical part of cell" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISS

GO:0046961 "proton-transporting ATPase activity, rotational mechanism" evidence=TAS

GO:0005215 "transporter activity" evidence=NAS

GO:0015992 "proton transport" evidence=TAS

GO:0016469 "proton-transporting two-sector ATPase complex" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0006879 "cellular iron ion homeostasis" evidence=TAS

GO:0008286 "insulin receptor signaling pathway" evidence=TAS

GO:0033572 "transferrin transport" evidence=TAS

GO:0051701 "interaction with host" evidence=TAS

GO:0055085 "transmembrane transport" evidence=TAS

GO:0090382 "phagosome maturation" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q4R5H9 ATP6V1C1 "V-type proton ATPase subunit C 1" [Macaca fascicularis (taxid:9541)]

 Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
 Identities = 99/247 (40%), Positives = 143/247 (57%)

Query:     3 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKS 62
             + +W++S P + +    W +L    SK++      +FNIP+L+VGT            K 
Sbjct:     2 TEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKL 61

Query:    63 NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
             ++FVE V  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I
Sbjct:    62 DAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNI 121

Query:   122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
              + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ SE+
Sbjct:   122 SEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEY 181

Query:   181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
             LVTLL VVPK +  DW+  YETL   VVPRSS +L ED +  L  VTLF +  D+FR  A
Sbjct:   182 LVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKA 241

Query:   241 REKGFQV 247
             RE  F V
Sbjct:   242 RENKFIV 248

GO:0005886 "plasma membrane" evidence=ISS

UNIPROTKB|Q5RDQ7 ATP6V1C1 "V-type proton ATPase subunit C 1" [Pongo abelii (taxid:9601)]

 Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
 Identities = 99/247 (40%), Positives = 143/247 (57%)

Query:     3 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKS 62
             + +W++S P + +    W +L    SK++      +FNIP+L+VGT            K 
Sbjct:     2 TEFWLISAPGEKTCQQTWEKLHAATSKNNNLAVTSKFNIPDLKVGTLDVLVGLSDELAKL 61

Query:    63 NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
             ++FVE V  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I
Sbjct:    62 DAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNI 121

Query:   122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
              + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ SE+
Sbjct:   122 SEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEY 181

Query:   181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
             LVTLL VVPK +  DW+  YETL   VVPRSS +L ED +  L  VTLF +  D+FR  A
Sbjct:   182 LVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKA 241

Query:   241 REKGFQV 247
             RE  F V
Sbjct:   242 RENKFIV 248

GO:0005886 "plasma membrane" evidence=ISS

UNIPROTKB|P21282 ATP6V1C1 "V-type proton ATPase subunit C 1" [Bos taurus (taxid:9913)]

 Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
 Identities = 98/247 (39%), Positives = 143/247 (57%)

Query:     3 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKS 62
             + +W++S P + +    W +L    +K++      +FNIP+L+VGT            K 
Sbjct:     2 TEFWLISAPGEKTCQQTWEKLHAATTKNNNLAVSSKFNIPDLKVGTLDVLVGLSDELAKL 61

Query:    63 NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
             ++FVE V  K+ + + + LE        +L  +GV + TY+TRF WD AKYP    L+ I
Sbjct:    62 DAFVEGVVKKVAQYMADVLEDSKDKVQENLLANGVDLVTYITRFQWDMAKYPIKQSLKNI 121

Query:   122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
              + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ SE+
Sbjct:   122 SEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEY 181

Query:   181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
             LVTLL VVPK +  DW+  YETL   VVPRSS +L ED +  L  VTLF +  D+FR  A
Sbjct:   182 LVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKA 241

Query:   241 REKGFQV 247
             RE  F V
Sbjct:   242 RENKFIV 248

GO:0005886 "plasma membrane" evidence=ISS

GO:0008553 "hydrogen-exporting ATPase activity, phosphorylative mechanism" evidence=IEA

GO:0033180 "proton-transporting V-type ATPase, V1 domain" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

MGI|MGI:1913585 Atp6v1c1 "ATPase, H+ transporting, lysosomal V1 subunit C1" [Mus musculus (taxid:10090)]

 Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
 Identities = 98/247 (39%), Positives = 142/247 (57%)

Query:     3 SRYWVVSLPVQNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTXXXXXXXXXXXVKS 62
             + +W++S P + +    W +L    +K++      +FNIP+L+VGT            K 
Sbjct:     2 TEFWLISAPGEKTCQQTWEKLHAATTKNNNLAVSSKFNIPDLKVGTLDVLVGLSDELAKL 61

Query:    63 NSFVESVSHKIRRQIEE-LERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREI 121
             ++FVE V  K+ + + + LE        +L   GV + TY+TRF WD AKYP    L+ I
Sbjct:    62 DAFVEGVVKKVAQYMADVLEDSKDKVQENLLASGVDLVTYITRFQWDMAKYPIKQSLKNI 121

Query:   122 VDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IITSEH 180
              + I   V +I++DLK R + YNN++  L  + RK +GSL  R L+ +VK +D ++ SE+
Sbjct:   122 SEIIAKGVTQIDNDLKSRASAYNNLKGNLQNLERKNAGSLLTRSLAEIVKKDDFVLDSEY 181

Query:   181 LVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAA 240
             LVTLL VVPK +  DW+  YETL   VVPRSS +L ED +  L  VTLF +  D+FR  A
Sbjct:   182 LVTLLVVVPKLNHNDWIKQYETLAEMVVPRSSNVLSEDQDSYLCNVTLFRKAVDDFRHKA 241

Query:   241 REKGFQV 247
             RE  F V
Sbjct:   242 RENKFIV 248

GO:0005737 "cytoplasm" evidence=ISO

GO:0005886 "plasma membrane" evidence=IDA

GO:0006200 "ATP catabolic process" evidence=IDA

GO:0006810 "transport" evidence=IEA

GO:0006811 "ion transport" evidence=IEA

GO:0008553 "hydrogen-exporting ATPase activity, phosphorylative mechanism" evidence=IDA

GO:0015078 "hydrogen ion transmembrane transporter activity" evidence=IEA

GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA

GO:0015992 "proton transport" evidence=IDA

GO:0031410 "cytoplasmic vesicle" evidence=ISO

GO:0033180 "proton-transporting V-type ATPase, V1 domain" evidence=IEA

GO:0034220 "ion transmembrane transport" evidence=IDA

GO:0045177 "apical part of cell" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SDS7	VATC_ARATH	No assigned EC number	0.8744	0.9610	0.6586	yes	no
Q9SCB9	VATC_HORVU	No assigned EC number	0.7420	0.9610	0.6977	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	DET3	DET3 (DE-ETIOLATED 3); proton-transporting ATPase, rotational mechanism; Encodes subunit C of the vacuolar H(+)-ATPase (V-ATPase). Bound and phosphorylated by AtWNK8. ; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells (375 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	VHA-A	VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT A); ATP binding / hydrogen ion transporting ATP synthase, [...] (623 aa)				•	•	•	•		0.995
	AT3G58730	vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (V [...] (261 aa)				•	•	•	•		0.992
	WNK8	WNK8 (WITH NO LYSINE (K) KINASE 8); kinase/ protein kinase; Encodes a member of the WNK family [...] (563 aa)					•		•		0.984
	AT3G42050	vacuolar ATP synthase subunit H family protein; vacuolar ATP synthase subunit H family protein; [...] (441 aa)				•		•	•		0.983
	VHA-A3	VHA-A3 (VACUOLAR PROTON ATPASE A3); ATPase; Vacuolar proton ATPase subunit VHA-a isoform 3. Loc [...] (821 aa)				•	•	•	•		0.973
	VHA-A2	VHA-A2 (VACUOLAR PROTON ATPASE A2); ATPase; Vacuolar proton ATPase subunit VHA-a isoform 2. Loc [...] (821 aa)					•	•	•		0.966
	VHA-A1	VHA-A1 (VACUOLAR PROTON ATPASE A 1); ATPase; Vacuolar proton ATPase subunit VHA-a isoform 1. Lo [...] (817 aa)					•	•	•		0.951
	VHA-E2	VHA-E2 (VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 2); hydrogen-exporting ATPase, phosphorylative mec [...] (235 aa)				•	•	•	•		0.951
	VATF	vacuolar ATPase subunit F family protein; vacuolar ATPase subunit F family protein; FUNCTIONS I [...] (128 aa)				•	•	•	•		0.949
	TUF	TUF (VACUOLAR ATP SYNTHASE SUBUNIT E1); proton-transporting ATPase, rotational mechanism; Encod [...] (230 aa)				•	•	•	•		0.939

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	257
pfam03223	371	pfam03223, V-ATPase_C, V-ATPase subunit C	1e-109
COG5127	383	COG5127, COG5127, Vacuolar H+-ATPase V1 sector, su	6e-42

>gnl|CDD|217433 pfam03223, V-ATPase_C, V-ATPase subunit C

 Score =  320 bits (822), Expect = e-109
 Identities = 129/248 (52%), Positives = 175/248 (70%), Gaps = 5/248 (2%)

Query: 5   YWVVSLPVQNS---AASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVK 61
           YW+VSLPV  +   A  +W  L    S  S  + + +FNIP+L+VGTLDSL+ LSD+L K
Sbjct: 1   YWLVSLPVLKTDSQANQIWKELLLVSSLGSNLSNVSKFNIPDLKVGTLDSLVTLSDELGK 60

Query: 62  SNSFVESVSHKIRRQIEEL-ERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLRE 120
            ++ VE V  KI R + EL E   G  SS+L V+ V +D YLTRF WD AKYPT   L+E
Sbjct: 61  LDTQVEGVLKKIERILRELLEDQGGKLSSTLRVNDVSLDQYLTRFQWDSAKYPTKQSLKE 120

Query: 121 IVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDII-TSE 179
           +VD +   VA+I++DL+ + AEYNN +S L A+ RKQ+G+L+VR L+++VKPED +  SE
Sbjct: 121 LVDLLSKEVAQIDNDLRSKSAEYNNAKSNLAALERKQTGNLSVRSLADIVKPEDFVLDSE 180

Query: 180 HLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIA 239
           +L T+L  VPK S KD+LASYETL+  VVPRS+K++ ED+EYAL+TVTLF +V ++F+  
Sbjct: 181 YLTTVLVAVPKNSVKDFLASYETLSDMVVPRSAKVIAEDDEYALFTVTLFKKVVEDFKTK 240

Query: 240 AREKGFQV 247
            REK F V
Sbjct: 241 CREKKFIV 248

Length = 371

>gnl|CDD|227456 COG5127, COG5127, Vacuolar H+-ATPase V1 sector, subunit C [Energy production and conversion]

 Score =  147 bits (371), Expect = 6e-42
 Identities = 67/251 (26%), Positives = 114/251 (45%), Gaps = 7/251 (2%)

Query: 2   ASRYWVVSLPV--QNSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDL 59
            S + +VSLPV    S      ++ +     S  +    F +P+ +  +LD L+  S+ L
Sbjct: 3   KSDFILVSLPVEEDGSRPDED-QIWDLYGGRSTVSR---FLLPSFKGVSLDGLINQSERL 58

Query: 60  VKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLR 119
            K +   E    KI +      R S  +     +       Y   F WD   + T   + 
Sbjct: 59  GKLDKQCEGAISKILKIFMGYCRSSNGDRVGKGIVYGSTPEYGDFFEWDRQSFVTNKSIE 118

Query: 120 EIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPEDII-TS 178
           + +  I     +I  D + +  E++  + +   + RK  GSL+   L  +V+ ED++  S
Sbjct: 119 KAILLIDGEYRRISKDYREKAEEFDGAKRECEKLQRKTRGSLSDISLGIIVEREDVVEGS 178

Query: 179 EHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRI 238
           E L  +   VPK    ++  SYETL+ +V P S++ +  D EY L+ V +F +  ++FR 
Sbjct: 179 EFLTVVYVAVPKALVPEFNRSYETLSPHVSPDSAEKVNSDEEYVLFKVYVFKKGEEDFRT 238

Query: 239 AAREKGFQVGE 249
            ARE+ F V E
Sbjct: 239 MAREEKFMVRE 249

Length = 383

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	257
KOG2909	381	consensus Vacuolar H+-ATPase V1 sector, subunit C	100.0
PF03223	371	V-ATPase_C: V-ATPase subunit C; InterPro: IPR00490	100.0
COG5127	383	Vacuolar H+-ATPase V1 sector, subunit C [Energy pr	100.0
PRK05771	646	V-type ATP synthase subunit I; Validated	85.59

>KOG2909 consensus Vacuolar H+-ATPase V1 sector, subunit C [Energy production and conversion]

Probab=100.00  E-value=8.3e-89  Score=627.24  Aligned_cols=251  Identities=47%  Similarity=0.764  Sum_probs=243.3

Q ss_pred             CceEEEEeecCCCC-hHHHHHHHHHHhccCCCCCCceeecCCCCCCcChhhhHhhhhhhHhhhhhHHHHHHHHHHHHHHh
Q 025125            2 ASRYWVVSLPVQNS-AASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKSNSFVESVSHKIRRQIEEL   80 (257)
Q Consensus         2 ~~~~wLvs~P~~~~-~~~~~~~L~~~~~~~~~~~~~~~f~iP~fKvGTLDsLv~lsDeL~K~D~~~e~~v~Ki~~~~~~l   80 (257)
                      |++|||||+|++++ +.++|+.+...+++.+..+.+++|+||+||+||||+||++||||+|+|++||++++||.+++.+.
T Consensus         1 Ms~fwliSlP~~~~~~~~~~d~i~~~~sk~s~~~~vs~F~IP~fkvgsLD~Lv~~se~L~Kld~~~e~~i~ki~~~~~~~   80 (381)
T KOG2909|consen    1 MSEFWLISLPGEKTGNQQTWDRINDLTSKRSNLSTVSKFNIPDFKVGSLDVLVGLSEELGKLDTFVEGLIKKIAGYLKEV   80 (381)
T ss_pred             CcceEEEeCCcCCcccccHHHHHHHHHhccccccccccccCCCcccccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence            45999999999766 89999999999988887899999999999999999999999999999999999999999999888


Q ss_pred             hc-cccccccceeECCcChhhhhcccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCC
Q 025125           81 ER-VSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSG  159 (257)
Q Consensus        81 ~~-~~~~~~~~l~v~~~~~~~Yl~~F~Wd~aKyp~~~~l~elv~~i~~~v~~id~dlk~k~~~Yn~~K~~l~~~~RK~~G  159 (257)
                      ++ .++++.+++.+||+|+++|+++|+||++|||.++||++++++|+++++|||+|+|+|+++||++|++|++++||++|
T Consensus        81 le~~s~~~~~~l~~n~~~~~ey~t~F~Wd~akf~~~~si~~iid~I~~e~~qie~Dlk~r~a~yn~ak~nl~nlerK~~G  160 (381)
T KOG2909|consen   81 LEDSSGKVGENLMANGVPLPEYLTRFQWDMAKFPTNQSIKEIIDLISKEIAQIENDLKTRAAAYNNAKGNLQNLERKKTG  160 (381)
T ss_pred             HhhcccchhhceeeCCcCHHHHHhHheehhhhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhccC
Confidence            77 48888999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCCCCCCCCcc-cCCcceEEEEEecCCChHHHHHHhccccCccccCCcccccccCCeeEEEEEEecccHHHHHH
Q 025125          160 SLAVRDLSNLVKPEDII-TSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRI  238 (257)
Q Consensus       160 nL~~rsL~diV~~edfv-dSEyLtTllVvVPk~~~~ewl~~YEtLs~~VVPrSs~~i~eD~e~~L~~VtlFKk~~~eF~~  238 (257)
                      ||++|||++||+||||| |||||+|++|||||++++||+++||||++||||||+++|.||+||+||+||||||.+|+|++
T Consensus       161 sL~~rsL~~IVk~edfvl~SEyL~tllVvVPK~~~~df~~~YEtlsd~VvPrSskki~eD~Ey~Lf~V~lFkk~~edFr~  240 (381)
T KOG2909|consen  161 SLSTRSLADIVKKEDFVLDSEYLTTLLVVVPKALVKDFLKSYETLSDMVVPRSSKKINEDAEYVLFTVTLFKKVAEDFRT  240 (381)
T ss_pred             ChhhhhHHHhCCchhhccchhhheeEEEEeeccchHHHHHHHHhhccccchhhhhhcccccceEEEEEEEeehhHHHHHH
Confidence            99999999999999999 99999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCeeCccee
Q 025125          239 AAREKGFQVGEKFV  252 (257)
Q Consensus       239 ~aRe~kf~vRdff~  252 (257)
                      +|||+||+||||.-
T Consensus       241 ~ArE~kF~vRdF~y  254 (381)
T KOG2909|consen  241 KAREKKFIVRDFDY  254 (381)
T ss_pred             HHHHcCCceeeccc
Confidence            99999999998643

>PF03223 V-ATPase_C: V-ATPase subunit C; InterPro: IPR004907 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane

Probab=100.00  E-value=1.1e-88  Score=642.67  Aligned_cols=247  Identities=53%  Similarity=0.835  Sum_probs=200.1

Q ss_pred             EEEEeecCCCChHHH-HHHHHHHhccCCCCCCceeecCCCCCCcChhhhHhhhhhhHhhhhhHHHHHHHHHHHHHHhhcc
Q 025125            5 YWVVSLPVQNSAASV-WNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKSNSFVESVSHKIRRQIEELERV   83 (257)
Q Consensus         5 ~wLvs~P~~~~~~~~-~~~L~~~~~~~~~~~~~~~f~iP~fKvGTLDsLv~lsDeL~K~D~~~e~~v~Ki~~~~~~l~~~   83 (257)
                      |||||+|+++++.+. |+.|+..++..+..+.+++|+||+||+||||+||+|||||+|+|++||++++||++++.+++++
T Consensus         1 ywLvs~P~~~~~~~~~~~~l~~~~~~~~~~~~~~~f~IP~lKvgTLDsLv~lsDeL~KlD~~~e~~~~Ki~~~~~~l~~~   80 (371)
T PF03223_consen    1 YWLVSLPNEKSSQQSIWEKLQLVTSKSNNLSTVSKFNIPDLKVGTLDSLVQLSDELAKLDSFVESVVRKIERQLRDLLEG   80 (371)
T ss_dssp             EEEEEEETT---TTS--HHHHHHHTGGGGTSEEEE------B-S-GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TS
T ss_pred             CEEEECCCCCCCcchHHHHHHHHhhccCCCCceeeecCCcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            899999997666554 9999998866666788999999999999999999999999999999999999999999999864


Q ss_pred             -ccccccceeECCcChhhhhcccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCcc
Q 025125           84 -SGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLA  162 (257)
Q Consensus        84 -~~~~~~~l~v~~~~~~~Yl~~F~Wd~aKyp~~~~l~elv~~i~~~v~~id~dlk~k~~~Yn~~K~~l~~~~RK~~GnL~  162 (257)
                       .++..+++.+||+++++||++|+||++|||.++||+||+++|++++++||+|+|+|+++||++|++|++++||++|||+
T Consensus        81 ~~~~~~~~l~v~~~~~~~yl~~F~Wd~aKy~~~~~l~el~~~i~~~v~~id~dlk~k~~~Yn~~K~~l~~~~RK~~GnL~  160 (371)
T PF03223_consen   81 DKDKLQENLLVNGVSLEQYLTRFQWDDAKYPTRRPLKELVDIISKEVSQIDNDLKSKSSAYNNAKSNLQALERKQTGNLS  160 (371)
T ss_dssp             S-SSS--S--BTTB-HHHHHHT----TTTS-TTSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-S-TT
T ss_pred             cccceeeEEEECCCcHHHHHHHheehhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccc
Confidence             5667899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCcc-cCCcceEEEEEecCCChHHHHHHhccccCccccCCcccccccCCeeEEEEEEecccHHHHHHHHH
Q 025125          163 VRDLSNLVKPEDII-TSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAR  241 (257)
Q Consensus       163 ~rsL~diV~~edfv-dSEyLtTllVvVPk~~~~ewl~~YEtLs~~VVPrSs~~i~eD~e~~L~~VtlFKk~~~eF~~~aR  241 (257)
                      +|||++||+|+||| |||||||++|||||++++||+++||||++|||||||++|++|+||+||+||||||++++|+++||
T Consensus       161 ~rsL~~iV~~ed~v~dSEyL~Tl~VvVPk~~~~ewl~~YEtL~~~VVPrSs~~i~eD~ey~L~~VtlFkk~~~eF~~~~r  240 (371)
T PF03223_consen  161 VRSLSDIVKPEDFVLDSEYLTTLLVVVPKNSVKEWLKSYETLTDMVVPRSSKKIAEDSEYVLFSVTLFKKVVDEFKNKCR  240 (371)
T ss_dssp             TS--TTT--GGGS--S-SSEEEEEEEEEGGGHHHHHHHGGGSSTTB-TT--EEEEE-SSEEEEEEEEEGGGHHHHHHHHH
T ss_pred             cccHHhhCCHHhcccccccceEEEEEechhhHHHHHHHHhccCCccCCChHHhhhcCCCeEEEEEEEEeccHHHHHHHHH
Confidence            99999999999999 99999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCeeCcce
Q 025125          242 EKGFQVGEKF  251 (257)
Q Consensus       242 e~kf~vRdff  251 (257)
                      |+||+||||.
T Consensus       241 e~kf~vRdF~  250 (371)
T PF03223_consen  241 EKKFIVRDFK  250 (371)
T ss_dssp             HTT-EEE---
T ss_pred             HcCCeeeecc
Confidence            9999999863

ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. V-ATPases (also known as V1V0-ATPase or vacuolar ATPase) (3.6.3.14 from EC) are found in the eukaryotic endomembrane system, and in the plasma membrane of prokaryotes and certain specialised eukaryotic cells. V-ATPases hydrolyse ATP to drive a proton pump, and are involved in a variety of vital intra- and inter-cellular processes such as receptor mediated endocytosis, protein trafficking, active transport of metabolites, homeostasis and neurotransmitter release []. V-ATPases are composed of two linked complexes: the V1 complex (subunits A-H) contains the catalytic core that hydrolyses ATP, while the V0 complex (subunits a, c, c', c'', d) forms the membrane-spanning pore. V-ATPases may have an additional role in membrane fusion through binding to t-SNARE proteins []. This entry represents the C subunit that is part of the V1 complex, and is localised to the interface between the V1 and V0 complexes []. This subunit does not show any homology with F-ATPase subunits. The C subunit plays an essential role in controlling the assembly of V-ATPase, acting as a flexible stator that holds together the catalytic (V1) and membrane (V0) sectors of the enzyme []. The release of subunit C from the ATPase complex results in the dissociation of the V1 and V0 subcomplexes, which is an important mechanism in controlling V-ATPase activity in cells. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0016820 hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, 0015991 ATP hydrolysis coupled proton transport, 0033180 proton-transporting V-type ATPase, V1 domain; PDB: 1U7L_A.

>COG5127 Vacuolar H+-ATPase V1 sector, subunit C [Energy production and conversion]

Probab=100.00  E-value=6.1e-64  Score=456.75  Aligned_cols=248  Identities=27%  Similarity=0.372  Sum_probs=223.9

Q ss_pred             ceEEEEeecCC--CChHHHHHHHHHHhccCCCCCCceeecCCCCCCcChhhhHhhhhhhHhhhhhHHHHHHHHHHHHHHh
Q 025125            3 SRYWVVSLPVQ--NSAASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKSNSFVESVSHKIRRQIEEL   80 (257)
Q Consensus         3 ~~~wLvs~P~~--~~~~~~~~~L~~~~~~~~~~~~~~~f~iP~fKvGTLDsLv~lsDeL~K~D~~~e~~v~Ki~~~~~~l   80 (257)
                      +.|||||+|.+  |+..+  ++....+-++.  +.+++|.||.||+|+||.||.+|++|+|+|.+|++.+.||.++++.+
T Consensus         4 sdFilvslP~~~~Gs~~d--~d~~~~l~ggr--stvs~f~~P~Fk~~SLd~lI~qsE~L~k~d~qc~~aIsKi~~i~~g~   79 (383)
T COG5127           4 SDFILVSLPVEEDGSRPD--EDQIWDLYGGR--STVSRFLLPSFKGVSLDGLINQSERLGKLDKQCEGAISKILKIFMGY   79 (383)
T ss_pred             cceEEEeccccccCCCCc--HHHHHHHhcCc--cccccccCCCccccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhh
Confidence            78999999984  33222  34444443333  66899999999999999999999999999999999999999999999


Q ss_pred             hccccccccceeECCcChhhhhcccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCC
Q 025125           81 ERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGS  160 (257)
Q Consensus        81 ~~~~~~~~~~l~v~~~~~~~Yl~~F~Wd~aKyp~~~~l~elv~~i~~~v~~id~dlk~k~~~Yn~~K~~l~~~~RK~~Gn  160 (257)
                      +.........+-++..+.++|+..|+||..+|..+++|++++.+|..|..+|++|+|+++++|+.||.+++++|||++||
T Consensus        80 ~~ss~gd~~~~~iv~~~~pEy~~~f~W~~~~F~~nKsI~~~i~li~~E~~~~~~d~r~~~~~f~~Ak~~~~~~qrk~~G~  159 (383)
T COG5127          80 CRSSNGDRVGKGIVYGSTPEYGDFFEWDRQSFVTNKSIEKAILLIDGEYRRISKDYREKAEEFDGAKRECEKLQRKTRGS  159 (383)
T ss_pred             hccccccccccccccCCchhhhhhhhcchhheeccccHHHHHHHhhhHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccCC
Confidence            97543334444455555669999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCcc-cCCcceEEEEEecCCChHHHHHHhccccCccccCCcccccccCCeeEEEEEEecccHHHHHHH
Q 025125          161 LAVRDLSNLVKPEDII-TSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIA  239 (257)
Q Consensus       161 L~~rsL~diV~~edfv-dSEyLtTllVvVPk~~~~ewl~~YEtLs~~VVPrSs~~i~eD~e~~L~~VtlFKk~~~eF~~~  239 (257)
                      |+.|||++||++|||| +|||||+++|||||+..++|+++||||++.|+|+||++|++|+||+||+|++|||-+++|.++
T Consensus       160 Ls~~sL~~IV~~eDvv~gse~Lt~v~vaVpk~l~~~F~~syeTls~~V~p~sa~kv~~D~EyvLf~V~vfkk~~~~f~t~  239 (383)
T COG5127         160 LSDISLGIIVEREDVVEGSEFLTVVYVAVPKALVPEFNRSYETLSPHVSPDSAEKVNSDEEYVLFKVYVFKKGEEDFRTM  239 (383)
T ss_pred             hhhhhHhhhcCchhhccchhhheeeEEEehhhhhHHHHhhhhhcCcccChhHHhhhcCccceEEEEEEEEecChHHHHHH
Confidence            9999999999999999 899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCeeCcceecc
Q 025125          240 AREKGFQVGEKFVMQ  254 (257)
Q Consensus       240 aRe~kf~vRdff~~~  254 (257)
                      |||.||+||||-..+
T Consensus       240 are~kf~vref~~~~  254 (383)
T COG5127         240 AREEKFMVREFDKNM  254 (383)
T ss_pred             HHhcCcchhhcchhh
Confidence            999999999975444

>PRK05771 V-type ATP synthase subunit I; Validated

Probab=85.59  E-value=9.1  Score=39.23  Aligned_cols=122  Identities=15%  Similarity=0.295  Sum_probs=73.8

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCcccccCCCC-CCCCCcccCCcceEEEEEecCCChHH
Q 025125          117 PLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNL-VKPEDIITSEHLVTLLAVVPKYSQKD  195 (257)
Q Consensus       117 ~l~elv~~i~~~v~~id~dlk~k~~~Yn~~K~~l~~~~RK~~GnL~~rsL~di-V~~edfvdSEyLtTllVvVPk~~~~e  195 (257)
                      +..|+.+....+..+++++++...+..++++++++.++....   ..+.+.++ +..+++-+++|+...+-.||+...+.
T Consensus        83 ~~~e~~~~~~~~~~~~~~~i~~l~~~~~~L~~~~~~l~~~~~---~l~~~~~ld~~l~~~~~~~~~~~~~G~i~~~~~~~  159 (646)
T PRK05771         83 SLEELIKDVEEELEKIEKEIKELEEEISELENEIKELEQEIE---RLEPWGNFDLDLSLLLGFKYVSVFVGTVPEDKLEE  159 (646)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhhhhhcCCCCHHHhCCCCcEEEEEEEecchhhhh
Confidence            455555556666666666666666666666666666654321   11122222 11122336789999999999877665


Q ss_pred             HHHHhccccCccccCCcccccccCCeeEEEEEEecccHHHHHHHHHHcCCeeC
Q 025125          196 WLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQVG  248 (257)
Q Consensus       196 wl~~YEtLs~~VVPrSs~~i~eD~e~~L~~VtlFKk~~~eF~~~aRe~kf~vR  248 (257)
                        ..++....++     ..+.++.++.-+-|..-+...++....|++.+|..-
T Consensus       160 --~~~~~~~~~~-----~~~~~~~~~~~~vvv~~~~~~~~~~~~l~~~~f~~~  205 (646)
T PRK05771        160 --LKLESDVENV-----EYISTDKGYVYVVVVVLKELSDEVEEELKKLGFERL  205 (646)
T ss_pred             --HHhhccCceE-----EEEEecCCcEEEEEEEEhhhHHHHHHHHHHCCCEEe
Confidence              1222211122     345677777766666677888999999999887643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	257
1u7l_A	392	Crystal Structure Of Subunit C (Vma5p) Of The Yeast		1e-29
4dl0_I	130	Crystal Structure Of The Heterotrimeric Egchead Per		8e-20

>pdb|1U7L|A Chain A, Crystal Structure Of Subunit C (Vma5p) Of The Yeast V-Atpase Length = 392

Iteration: 1
 Score =  126 bits (317), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 114/208 (54%), Gaps = 1/208 (0%)
Query: 39  FNIPNLRVGTXXXXXXXXXXXVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPV 98
           F IP  ++G+            K ++ + +   KI   ++ L   S     +L ++ +PV
Sbjct: 48  FKIPEFKIGSLDTLIVESEELSKVDNQIGASIGKIIEILQGLNETSTNAYRTLPINNMPV 107
Query: 99  DTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQS 158
             YL  F W   K+     +++++  I    ++++ D++   A YN+ ++ L A  RK++
Sbjct: 108 PEYLENFQWQTRKFKLDKSIKDLITLISNESSQLDADVRATYANYNSAKTNLAAAERKKT 167
Query: 159 GSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYE 217
           G L+VR L ++VKPED ++ SEHL T+L  VPK  + D+  SYETL+  VVP S+ ++ E
Sbjct: 168 GDLSVRSLHDIVKPEDFVLNSEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASASVIAE 227
Query: 218 DNEYALYTVTLFGRVADNFRIAAREKGF 245
           D EY L+ V LF +    F  AAREK F
Sbjct: 228 DAEYVLFNVHLFKKNVQEFTTAAREKKF 255

>pdb|4DL0|I Chain I, Crystal Structure Of The Heterotrimeric Egchead Peripheral Stalk Complex Of The Yeast Vacuolar Atpase Length = 130

Iteration: 1
 Score = 94.0 bits (232), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 48/97 (49%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 150 LNAINRKQSGSLAVRDLSNLVKPED-IITSEHLVTLLAVVPKYSQKDWLASYETLTSYVV 208
           L A  RK++G L+VR L ++VKPED ++ SEHL T+L  VPK  + D+  SYETL+  VV
Sbjct: 12  LAAAERKKTGDLSVRSLHDIVKPEDFVLNSEHLTTVLVAVPKSLKSDFEKSYETLSKNVV 71
Query: 209 PRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGF 245
           P S+ ++ ED EY L+ V LF +    F  AAREK F
Sbjct: 72  PASASVIAEDAEYVLFNVHLFKKNVQEFTTAAREKKF 108

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	257
1u7l_A	392	Vacuolar ATP synthase subunit C; hydrolase, struct	5e-99

>1u7l_A Vacuolar ATP synthase subunit C; hydrolase, structural protein; HET: TLA; 1.75A {Saccharomyces cerevisiae} SCOP: e.57.1.1 Length = 392

 Score =  293 bits (751), Expect = 5e-99
 Identities = 80/253 (31%), Positives = 136/253 (53%), Gaps = 4/253 (1%)

Query: 1   MASRYWVVSLPVQNSAASVWNRLQEQISKHSFD---TPLYRFNIPNLRVGTLDSLLALSD 57
            A+ + ++SLP      +      +     +       +  F IP  ++G+LD+L+  S+
Sbjct: 7   TANDFILISLPQNAQPVTAPGSKTDSWFNETLIGGRAFVSDFKIPEFKIGSLDTLIVESE 66

Query: 58  DLVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSP 117
           +L K ++ + +   KI   ++ L   S     +L ++ +PV  YL  F W   K+     
Sbjct: 67  ELSKVDNQIGASIGKIIEILQGLNETSTNAYRTLPINNMPVPEYLENFQWQTRKFKLDKS 126

Query: 118 LREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-II 176
           +++++  I    ++++ D++   A YN+ ++ L A  RK++G L+VR L ++VKPED ++
Sbjct: 127 IKDLITLISNESSQLDADVRATYANYNSAKTNLAAAERKKTGDLSVRSLHDIVKPEDFVL 186

Query: 177 TSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNF 236
            SEHL T+L  VPK  + D+  SYETL+  VVP S+ ++ ED EY L+ V LF +    F
Sbjct: 187 NSEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASASVIAEDAEYVLFNVHLFKKNVQEF 246

Query: 237 RIAAREKGFQVGE 249
             AAREK F   E
Sbjct: 247 TTAAREKKFIPRE 259

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	257
1u7l_A	392	Vacuolar ATP synthase subunit C; hydrolase, struct	100.0
3rrk_A	357	V-type ATPase 116 kDa subunit; alpha beta fold, pr	80.62

>1u7l_A Vacuolar ATP synthase subunit C; hydrolase, structural protein; HET: TLA; 1.75A {Saccharomyces cerevisiae} SCOP: e.57.1.1

Probab=100.00  E-value=3.8e-90  Score=654.39  Aligned_cols=247  Identities=32%  Similarity=0.566  Sum_probs=234.4

Q ss_pred             CCceEEEEeecCCC----ChHHHHHH-HHHHhccCCCCCCceeecCCCCCCcChhhhHhhhhhhHhhhhhHHHHHHHHHH
Q 025125            1 MASRYWVVSLPVQN----SAASVWNR-LQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKSNSFVESVSHKIRR   75 (257)
Q Consensus         1 m~~~~wLvs~P~~~----~~~~~~~~-L~~~~~~~~~~~~~~~f~iP~fKvGTLDsLv~lsDeL~K~D~~~e~~v~Ki~~   75 (257)
                      |+++|||||+|.++    +++++|+. |+..++++  .+.+++|+||+|||||||+||+|||||+|+|++||++++||++
T Consensus         7 ~~~~y~LvSlP~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~f~IP~lkvGTLDsLv~lsDdL~Kld~~ve~v~~Ki~~   84 (392)
T 1u7l_A            7 TANDFILISLPQNAQPVTAPGSKTDSWFNETLIGG--RAFVSDFKIPEFKIGSLDTLIVESEELSKVDNQIGASIGKIIE   84 (392)
T ss_dssp             CCCEEEEEEEETTCCCTTSTTCCHHHHHHHTGGGG--TSEEEECCCCCCBCSCGGGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCceEEEEccCCCCCCccHHHHHHHHHHhhccCC--CCccccccCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34699999999864    34588987 88887754  4789999999999999999999999999999999999999999


Q ss_pred             HHHHhhcc-ccccccceeECCcChhhhhcccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 025125           76 QIEELERV-SGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAIN  154 (257)
Q Consensus        76 ~~~~l~~~-~~~~~~~l~v~~~~~~~Yl~~F~Wd~aKyp~~~~l~elv~~i~~~v~~id~dlk~k~~~Yn~~K~~l~~~~  154 (257)
                      ++++++++ .++..+++ +||+++++||++|+||+||||.++||+||+++|++++++||+|+|+|+++||++|++|++++
T Consensus        85 ~~~~~~~~~~~~~~~~l-vn~~~~~~yl~~F~Wd~aKyp~~~~L~elv~~i~~~v~~id~dlk~k~~~Yn~~K~~l~~~~  163 (392)
T 1u7l_A           85 ILQGLNETSTNAYRTLP-INNMPVPEYLENFQWQTRKFKLDKSIKDLITLISNESSQLDADVRATYANYNSAKTNLAAAE  163 (392)
T ss_dssp             HHHHTTSSCSSSCCSCC-BTTBCHHHHHHTCCCCTTTSCTTSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhcchhhHHHHh-cCCCCHHHHHhhceeccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999864 45667788 99999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhCCCCcccccCCCCCCCCCcc-cCCcceEEEEEecCCChHHHHHHhccccCccccCCcccccccCCeeEEEEEEecccH
Q 025125          155 RKQSGSLAVRDLSNLVKPEDII-TSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVA  233 (257)
Q Consensus       155 RK~~GnL~~rsL~diV~~edfv-dSEyLtTllVvVPk~~~~ewl~~YEtLs~~VVPrSs~~i~eD~e~~L~~VtlFKk~~  233 (257)
                      ||++|||++|||++||+||||| |||||+|++|||||++++||+++||||++|||||||++|++|+||+||+||+|||++
T Consensus       164 RK~~GnL~~rsL~~iV~~edfv~dSEyL~TllVvVPk~~~~dwl~~YEtL~~~VVPrSs~~i~~D~ey~L~~VtlFkk~~  243 (392)
T 1u7l_A          164 RKKTGDLSVRSLHDIVKPEDFVLNSEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASASVIAEDAEYVLFNVHLFKKNV  243 (392)
T ss_dssp             HHTCSCTTTSCCTTTCCGGGSCCSCSSEEEEEEEEEGGGHHHHHHHGGGSSTTBCTTCCEEEEECSSEEEEEEEEEGGGH
T ss_pred             cccCCceeeeeHHHhcCHHHccCccccceEEEEEEeCccHHHHHHHHhhcCCCccCChhhhhhcCCCceEEEEEEEhhhH
Confidence            9999999999999999999999 999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCeeCcc
Q 025125          234 DNFRIAAREKGFQVGEK  250 (257)
Q Consensus       234 ~eF~~~aRe~kf~vRdf  250 (257)
                      ++|+++|||+||+||||
T Consensus       244 ~eF~~~~Re~kf~vRdF  260 (392)
T 1u7l_A          244 QEFTTAAREKKFIPREF  260 (392)
T ss_dssp             HHHHHHHHHTTCEEECC
T ss_pred             HHHHHHHHHcCCccccC
Confidence            99999999999999986

>3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber}

Probab=80.62  E-value=21  Score=31.94  Aligned_cols=109  Identities=8%  Similarity=-0.029  Sum_probs=71.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhhhhCCC-CcccccCCCCCCCCCcccCCcceEEEEEe-cCCChH
Q 025125          120 EIVDGIHTLVAKIEDDLKVRVAEYNNVRSQ---LNAINRKQSG-SLAVRDLSNLVKPEDIITSEHLVTLLAVV-PKYSQK  194 (257)
Q Consensus       120 elv~~i~~~v~~id~dlk~k~~~Yn~~K~~---l~~~~RK~~G-nL~~rsL~diV~~edfvdSEyLtTllVvV-Pk~~~~  194 (257)
                      +.++.+..++..+++.+...-+....++..   +..+.-=  + +|-              -+-++--+...| |+....
T Consensus        99 ~~~~~l~~~~~~l~~~~~~L~~~~~~l~~~~~~l~~L~p~--~~~ld--------------~~~~~g~~~g~ip~~~~~~  162 (357)
T 3rrk_A           99 AVLRPVASRAEVLGKERAALEEEIQTIELFGKAAEKLAAL--AHGLD--------------ESPRLGVIPFLVAKPEELE  162 (357)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTTTT--------------TCTTEEEEEEEESCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhh--hccCC--------------ccceeeeeeEEecChhhHH
Confidence            345566666666666666666666666666   5555322  2 332              244566666689 788899


Q ss_pred             HHHHHhccccC-ccccCCcccccccCCeeEEEEEEecccHHHHHHHHHHcCCeeC
Q 025125          195 DWLASYETLTS-YVVPRSSKLLYEDNEYALYTVTLFGRVADNFRIAAREKGFQVG  248 (257)
Q Consensus       195 ewl~~YEtLs~-~VVPrSs~~i~eD~e~~L~~VtlFKk~~~eF~~~aRe~kf~vR  248 (257)
                      .|.+..+..++ +++    ..+.++.++..+-|..-+...++....|+..+|..=
T Consensus       163 ~~~~~l~~~~~~~~~----~~~~~~~~~~~~vv~~~~~~~~~v~~il~s~~f~~~  213 (357)
T 3rrk_A          163 AVRKALQEALADRFV----LEAEPLENQLAALVVVKRSELEAARSSLSRLGLAEL  213 (357)
T ss_dssp             HHHHHHHHHHTTSCE----EEEEECSSSEEEEEEEEGGGHHHHHHHHHTTTCCBC
T ss_pred             HHHHHHHHhcCCeEE----EEeecCCCcEEEEEEEEHHHHHHHHHHHHHCCCeec
Confidence            99888776433 222    234667777666666668889999999999998643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	257
d1u7la_	388	e.57.1.1 (A:) Vacuolar ATP synthase subunit C {Bak	1e-107

>d1u7la_ e.57.1.1 (A:) Vacuolar ATP synthase subunit C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: Multi-domain proteins (alpha and beta)
fold: Vacuolar ATP synthase subunit C
superfamily: Vacuolar ATP synthase subunit C
family: Vacuolar ATP synthase subunit C
domain: Vacuolar ATP synthase subunit C
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  312 bits (801), Expect = e-107
 Identities = 80/252 (31%), Positives = 136/252 (53%), Gaps = 4/252 (1%)

Query: 2   ASRYWVVSLPVQNSAASVWNRLQEQISKHSFD---TPLYRFNIPNLRVGTLDSLLALSDD 58
           A+ + ++SLP      +      +     +       +  F IP  ++G+LD+L+  S++
Sbjct: 4   ANDFILISLPQNAQPVTAPGSKTDSWFNETLIGGRAFVSDFKIPEFKIGSLDTLIVESEE 63

Query: 59  LVKSNSFVESVSHKIRRQIEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPL 118
           L K ++ + +   KI   ++ L   S     +L ++ +PV  YL  F W   K+     +
Sbjct: 64  LSKVDNQIGASIGKIIEILQGLNETSTNAYRTLPINNMPVPEYLENFQWQTRKFKLDKSI 123

Query: 119 REIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRKQSGSLAVRDLSNLVKPED-IIT 177
           ++++  I    ++++ D++   A YN+ ++ L A  RK++G L+VR L ++VKPED ++ 
Sbjct: 124 KDLITLISNESSQLDADVRATYANYNSAKTNLAAAERKKTGDLSVRSLHDIVKPEDFVLN 183

Query: 178 SEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADNFR 237
           SEHL T+L  VPK  + D+  SYETL+  VVP S+ ++ ED EY L+ V LF +    F 
Sbjct: 184 SEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASASVIAEDAEYVLFNVHLFKKNVQEFT 243

Query: 238 IAAREKGFQVGE 249
            AAREK F   E
Sbjct: 244 TAAREKKFIPRE 255

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	257
d1u7la_	388	Vacuolar ATP synthase subunit C {Baker's yeast (Sa	100.0

>d1u7la_ e.57.1.1 (A:) Vacuolar ATP synthase subunit C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Multi-domain proteins (alpha and beta)
fold: Vacuolar ATP synthase subunit C
superfamily: Vacuolar ATP synthase subunit C
family: Vacuolar ATP synthase subunit C
domain: Vacuolar ATP synthase subunit C
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.3e-89  Score=643.38  Aligned_cols=248  Identities=33%  Similarity=0.563  Sum_probs=234.3

Q ss_pred             CceEEEEeecCCCCh-----HHHHHHHHHHhccCCCCCCceeecCCCCCCcChhhhHhhhhhhHhhhhhHHHHHHHHHHH
Q 025125            2 ASRYWVVSLPVQNSA-----ASVWNRLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLALSDDLVKSNSFVESVSHKIRRQ   76 (257)
Q Consensus         2 ~~~~wLvs~P~~~~~-----~~~~~~L~~~~~~~~~~~~~~~f~iP~fKvGTLDsLv~lsDeL~K~D~~~e~~v~Ki~~~   76 (257)
                      .++|||||+|.+.++     .++..|+++.+.+++  +.+++|+||+|||||||+||+|||||+|+|++||++++||+++
T Consensus         4 ~~~y~lvSlP~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~f~IP~lKvGTLDsLv~lsDeL~KlD~~ve~vv~Kv~~~   81 (388)
T d1u7la_           4 ANDFILISLPQNAQPVTAPGSKTDSWFNETLIGGR--AFVSDFKIPEFKIGSLDTLIVESEELSKVDNQIGASIGKIIEI   81 (388)
T ss_dssp             CCEEEEEEEETTCCCTTSTTCCHHHHHHHTGGGGT--SEEEECCCCCCBCSCGGGHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccceEEEECCCCCCCCCCchhhHHHHHHhcccCCC--ceeeecCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            579999999986432     345566777776655  6689999999999999999999999999999999999999999


Q ss_pred             HHHhhccccccccceeECCcChhhhhcccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 025125           77 IEELERVSGIESSSLSVDGVPVDTYLTRFVWDEAKYPTMSPLREIVDGIHTLVAKIEDDLKVRVAEYNNVRSQLNAINRK  156 (257)
Q Consensus        77 ~~~l~~~~~~~~~~l~v~~~~~~~Yl~~F~Wd~aKyp~~~~l~elv~~i~~~v~~id~dlk~k~~~Yn~~K~~l~~~~RK  156 (257)
                      +.++.++.+...+++.+||+++++||++|+||++|||.++||+||+++|++++++||+|+|+|+++||++|++|++++||
T Consensus        82 ~~~l~~~~~~~~~~l~v~~~~~~~yl~~F~Wd~aKyp~~~~l~elv~~i~~~~~~id~dlk~k~~~Yn~~K~~l~~~~RK  161 (388)
T d1u7la_          82 LQGLNETSTNAYRTLPINNMPVPEYLENFQWQTRKFKLDKSIKDLITLISNESSQLDADVRATYANYNSAKTNLAAAERK  161 (388)
T ss_dssp             HHHTTSSCSSSCCSCCBTTBCHHHHHHTCCCCTTTSCTTSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhccchhhhheEeECCccHHHHhhheecccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            99998877767789999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCCCCCCCCcc-cCCcceEEEEEecCCChHHHHHHhccccCccccCCcccccccCCeeEEEEEEecccHHH
Q 025125          157 QSGSLAVRDLSNLVKPEDII-TSEHLVTLLAVVPKYSQKDWLASYETLTSYVVPRSSKLLYEDNEYALYTVTLFGRVADN  235 (257)
Q Consensus       157 ~~GnL~~rsL~diV~~edfv-dSEyLtTllVvVPk~~~~ewl~~YEtLs~~VVPrSs~~i~eD~e~~L~~VtlFKk~~~e  235 (257)
                      ++|||++|||++||+|+||| |||||||++|||||++++||+++||||++|||||||++|++|+||+||+||+|||++++
T Consensus       162 ~~G~L~~r~L~diV~~ed~V~dSEyLtTllVvVPk~~~~dwl~~YEtL~~~VVPrSs~~i~~D~e~~L~~VtlFkk~~~e  241 (388)
T d1u7la_         162 KTGDLSVRSLHDIVKPEDFVLNSEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASASVIAEDAEYVLFNVHLFKKNVQE  241 (388)
T ss_dssp             TCSCTTTSCCTTTCCGGGSCCSCSSEEEEEEEEEGGGHHHHHHHGGGSSTTBCTTCCEEEEECSSEEEEEEEEEGGGHHH
T ss_pred             cCCceeeccHHhhCCHHHhccccccceEEEEEeecccHHHHHHHHhhhcCcccCChhhhceecCCeeEEEEEEEhhhHHH
Confidence            99999999999999999999 99999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCeeCcce
Q 025125          236 FRIAAREKGFQVGEKF  251 (257)
Q Consensus       236 F~~~aRe~kf~vRdff  251 (257)
                      |+++|||+||+||||.
T Consensus       242 F~~~aRE~kf~vRdF~  257 (388)
T d1u7la_         242 FTTAAREKKFIPREFN  257 (388)
T ss_dssp             HHHHHHHTTCEEECCC
T ss_pred             HHHHHHHcCccccccc
Confidence            9999999999999853