Citrus Sinensis ID: 025155

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------
MASASSLKPISYSLNLPNSRSSSSETQRLLGFKSSFSSHHRNLSLSTTHQDVSRRSSKNNVTTKAFFFNKPSSQPDSSRPANNKVQELFVYEINERDRNSPAILKLSQKPEHLTIGDLVPFTNKLYTGDLQKRIGITAGLCVLIKHEPEKKGDRFEAIYSFYFGDYGHISVQGAYLTYEDTYLAVTGGSGIFEGVYGQVKLHQIVFPYKLFYTFYLKGVADLPQELLVKPVEPSPTVEAAPAAKATEPHAAISNFTN
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEECcccccccccccccccccEEEEEEEEcccccccccEEEcccccccccccccccccccccccccccEEcEEEEEEEEEEEcccccccEEEEEEEEEEcccCEEEECcCEEEcccEEEEEEcccEEEEEEEEEEEEEEEEEcEEEEEEEEEcccccccHHHccccccccccccccHHHHccccccccccccc
**************************************************************************************ELFVYEINERDRNSPAILKLSQKPEHLTIGDLVPFTNKLYTGDLQKRIGITAGLCVLIKHEPEKKGDRFEAIYSFYFGDYGHISVQGAYLTYEDTYLAVTGGSGIFEGVYGQVKLHQIVFPYKLFYTFYLKGVADLPQELLVKPVEP******************IS****
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MASASSLKPISYSLNLPNSRSSSSETQRLLGFKSSFSSHHRNLSLSTTHQDVSRRSSKNNVTTKAFFFNKPSSQPDSSRPANNKVQELFVYEINERDRNSPAILKLSQKPEHLTIGDLVPFTNKLYTGDLQKRIGITAGLCVLIKHEPEKKGDRFEAIYSFYFGDYGHISVQGAYLTYEDTYLAVTGGSGIFEGVYGQVKLHQIVFPYKLFYTFYLKGVADLPQELLVKPVEPSPTVEAAPAAKATEPHAAISNFTN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Allene oxide cyclase 3, chloroplastic Involved in the production of 12-oxo-phytodienoic acid (OPDA), a precursor of jasmonic acid.probableQ9LS01

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
5.-.-.-Isomerases.probable
5.3.-.-Intramolecular oxidoreductases.probable
5.3.99.-Other intramolecular oxidoreductases.probable
5.3.99.6Allene-oxide cyclase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2BRJ, chain A
Confidence level:very confident
Coverage over the Query: 84-257
View the alignment between query and template
View the model in PyMOL