Citrus Sinensis ID: 025192

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250------
MQLAAAGQEGFKSKGSTDTDDKDPKKRPLVVIGILTRFGRKNNRDAIRKAWMGTGAALKKRENEKGIITRFVIGRSANRGDSLDQDIDSENKQTNDFFILDHHVEAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDKPRVYIGCMKSGDVFSEPGHKWYEPDWWKFGDKKLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGLDVKYLNEGKFCCSSWSSGAICAGV
ccccccccccccccccccccccccccccEEEEEEEcccccHHHHHHHHHHHcccccccccccccccEEEEEEEEEccccccHHHHHHHHHHHHcccEEEEccccccccccHHHHHHHHHHHHHcccEEEEEEEccccEEcHHHHHHHHHcccccccEEEEEEEcccccccccccccccccccccccccccccccccEEEEcHHHHHHHHHHccccccccccHHHHHHHHHccccEEEEcccccccccccccEEEcc
cHHHHHcccccccccccccccccccccEEEEEEEEcccccHHHHHHHHHHHccccHHHHHHHHcccEEEEEEEEEccccccHHHHHHHHHHHHcccEEEEcccHHcHHHHHHHHHHHHHHHHHHccccEEEEEcccEEEcHHHHHHHHHHccccccEEEEEcccccEccccccccEcccEEEccccccccccccccEEEEcHHHHHHHHHccHHHHHHcHccccHHHHHHcccEEEEcccHHcccccccccEEEcc
mqlaaagqegfkskgstdtddkdpkkrplvVIGILTRFGRKNNRDAIRKAWMGTGAALKKRENEKGIITRFVIgrsanrgdsldqdidsenkqtndffildhhveapkefpnkAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATlathldkprvyigcmksgdvfsepghkwyepdwwkfgdkklyfrHASGEMYVISRALAKFISINRSILrtyahddvsagswfLGLDVKylnegkfccsswssgaicagv
mqlaaagqegfkskgstdtddkdpkkrplvvigiltrfgrknnrdaiRKAWMgtgaalkkrenekgiitrfvigrsanrgdsLDQDIDSENKQTNDFFILDHHVEAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDKPRVYIGCMKsgdvfsepghkWYEPDWWKFGDKKLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGLDVKYLNEGKFccsswssgaicagv
MQLAAAGQEGFkskgstdtddkdpkkRPLVVIGILTRFGRKNNRDAIRKAWMGTGAALKKRENEKGIITRFVIGRSANRGDSLDQDIDSENKQTNDFFILDHHVEAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDKPRVYIGCMKSGDVFSEPGHKWYEPDWWKFGDKKLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGLDVKYLNEGKFCCSSWSSGAICAGV
****************************LVVIGILTRFGRKNNRDAIRKAWMGTGAALKKRENEKGIITRFVIGR*******************NDFFILDHHVEAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDKPRVYIGCMKSGDVFSEPGHKWYEPDWWKFGDKKLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGLDVKYLNEGKFCCSSWSSGAIC***
*Q*AA************************VVIGILTRFGRKNNRDAIRKAWMGTGAALKKRENEKGIITRFVIGRSANRG**LDQDIDSENKQTNDFFILDHHVEAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDKPRVYIGCMKSGDVFSEPGHKWYEPDWWKFGDKKLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGLDVKYLNEGKFCCSSWSSGAICAGV
***********************PKKRPLVVIGILTRFGRKNNRDAIRKAWMGTGAALKKRENEKGIITRFVIGRSANRGDSLDQDIDSENKQTNDFFILDHHVEAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDKPRVYIGCMKSGDVFSEPGHKWYEPDWWKFGDKKLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGLDVKYLNEGKFCCSSWSSGAICAGV
************************KKRPLVVIGILTRFGRKNNRDAIRKAWMGTGAALKKRENEKGIITRFVIGRSANRGDSLDQDIDSENKQTNDFFILDHHVEAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDKPRVYIGCMKSGDVFSEPGHKWYEPDWWKFGDKKLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGLDVKYLNEGKFCCSSWSSGAICAGV
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MQLAAAGQEGFKSKGSTDTDDKDPKKRPLVVIGILTRFGRKNNRDAIRKAWMGTGAALKKRENEKGIITRFVIGRSANRGDSLDQDIDSENKQTNDFFILDHHVEAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDKPRVYIGCMKSGDVFSEPGHKWYEPDWWKFGDKKLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGLDVKYLNEGKFCCSSWSSGAICAGV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query256 2.2.26 [Sep-21-2011]
Q94F27338 Probable beta-1,3-galacto yes no 1.0 0.757 0.707 1e-110
Q94A05345 Probable beta-1,3-galacto no no 0.976 0.724 0.472 5e-69
Q9MAP8399 Probable beta-1,3-galacto no no 0.933 0.598 0.485 6e-66
A8MRC7407 Probable beta-1,3-galacto no no 0.992 0.624 0.479 8e-65
Q5XEZ1346 Probable beta-1,3-galacto no no 0.976 0.722 0.452 1e-64
Q6NQB7393 Beta-1,3-galactosyltransf no no 0.949 0.618 0.451 3e-63
Q9ZV71409 Probable beta-1,3-galacto no no 0.988 0.618 0.474 9e-62
Q9SAA4384 Probable beta-1,3-galacto no no 0.957 0.638 0.473 4e-61
Q9LM60398 Probable beta-1,3-galacto no no 0.953 0.613 0.471 6e-60
Q8LEJ9407 Probable beta-1,3-galacto no no 0.980 0.616 0.463 3e-59
>sp|Q94F27|B3GTB_ARATH Probable beta-1,3-galactosyltransferase 11 OS=Arabidopsis thaliana GN=B3GALT11 PE=2 SV=1 Back     alignment and function desciption
 Score =  398 bits (1022), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 181/256 (70%), Positives = 215/256 (83%)

Query: 1   MQLAAAGQEGFKSKGSTDTDDKDPKKRPLVVIGILTRFGRKNNRDAIRKAWMGTGAALKK 60
           M+L++A QEGF SK     D  + KKRPLVVIGI+T  G K  RDA+R+AWMGTGA+LKK
Sbjct: 83  MELSSARQEGFVSKSPKLADGTETKKRPLVVIGIMTSLGNKKKRDAVRQAWMGTGASLKK 142

Query: 61  RENEKGIITRFVIGRSANRGDSLDQDIDSENKQTNDFFILDHHVEAPKEFPNKAKLFFAY 120
            E+EKG+I RFVIGRSAN+GDS+D+ ID+EN QT+DF ILD  VEAP+E   K KLFFAY
Sbjct: 143 LESEKGVIARFVIGRSANKGDSMDKSIDTENSQTDDFIILDDVVEAPEEASKKVKLFFAY 202

Query: 121 AVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDKPRVYIGCMKSGDVFSEPGHKWYEPDW 180
           A D+WDA++YAK  D++YVNID+LG TLA HL+ PR YIGCMKSG+VFSEP HKWYEP+W
Sbjct: 203 AADRWDAQFYAKAIDNIYVNIDALGTTLAAHLENPRAYIGCMKSGEVFSEPNHKWYEPEW 262

Query: 181 WKFGDKKLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGLDVKYLNEG 240
           WKFGDKK YFRHA GEMYVI+ ALA+F+SINR IL +YAHDDVS GSWF+GLDVK+++EG
Sbjct: 263 WKFGDKKAYFRHAYGEMYVITHALARFVSINRDILHSYAHDDVSTGSWFVGLDVKHVDEG 322

Query: 241 KFCCSSWSSGAICAGV 256
           KFCCS+WSS AICAGV
Sbjct: 323 KFCCSAWSSEAICAGV 338
Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal glycosyl residue.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q94A05|B3GTA_ARATH Probable beta-1,3-galactosyltransferase 10 OS=Arabidopsis thaliana GN=B3GALT10 PE=2 SV=1 Back     alignment and function description
>sp|Q9MAP8|B3GT6_ARATH Probable beta-1,3-galactosyltransferase 6 OS=Arabidopsis thaliana GN=B3GALT6 PE=2 SV=1 Back     alignment and function description
>sp|A8MRC7|B3GT2_ARATH Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana GN=B3GALT2 PE=2 SV=1 Back     alignment and function description
>sp|Q5XEZ1|B3GT9_ARATH Probable beta-1,3-galactosyltransferase 9 OS=Arabidopsis thaliana GN=B3GALT9 PE=2 SV=1 Back     alignment and function description
>sp|Q6NQB7|B3GT7_ARATH Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana GN=B3GALT7 PE=2 SV=1 Back     alignment and function description
>sp|Q9ZV71|B3GT3_ARATH Probable beta-1,3-galactosyltransferase 3 OS=Arabidopsis thaliana GN=B3GALT3 PE=2 SV=1 Back     alignment and function description
>sp|Q9SAA4|B3GT1_ARATH Probable beta-1,3-galactosyltransferase 1 OS=Arabidopsis thaliana GN=B3GALT1 PE=2 SV=2 Back     alignment and function description
>sp|Q9LM60|B3GT5_ARATH Probable beta-1,3-galactosyltransferase 5 OS=Arabidopsis thaliana GN=B3GALT5 PE=2 SV=1 Back     alignment and function description
>sp|Q8LEJ9|B3GT4_ARATH Probable beta-1,3-galactosyltransferase 4 OS=Arabidopsis thaliana GN=B3GALT4 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query256
255545088346 Beta-1,3-galactosyltransferase sqv-2, pu 1.0 0.739 0.796 1e-118
449456353339 PREDICTED: probable beta-1,3-galactosylt 0.988 0.746 0.773 1e-116
356515999343 PREDICTED: probable beta-1,3-galactosylt 0.996 0.743 0.784 1e-116
356509308343 PREDICTED: probable beta-1,3-galactosylt 0.996 0.743 0.780 1e-115
224072087344 predicted protein [Populus trichocarpa] 1.0 0.744 0.761 1e-115
297742294341 unnamed protein product [Vitis vinifera] 0.996 0.747 0.746 1e-112
224116934344 predicted protein [Populus trichocarpa] 0.984 0.732 0.757 1e-111
225426048340 PREDICTED: probable beta-1,3-galactosylt 0.992 0.747 0.742 1e-110
297796171338 galactosyltransferase family protein [Ar 1.0 0.757 0.714 1e-110
18423501338 putative beta-1,3-galactosyltransferase 1.0 0.757 0.707 1e-108
>gi|255545088|ref|XP_002513605.1| Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis] gi|223547513|gb|EEF49008.1| Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 204/256 (79%), Positives = 225/256 (87%)

Query: 1   MQLAAAGQEGFKSKGSTDTDDKDPKKRPLVVIGILTRFGRKNNRDAIRKAWMGTGAALKK 60
           ++LAAA QEGF S   T+ D  +  KR LVVIGILT FGRKNNR+AIRKAWMGTGA L K
Sbjct: 91  LELAAAKQEGFTSNFLTEKDGNNSNKRRLVVIGILTTFGRKNNRNAIRKAWMGTGATLMK 150

Query: 61  RENEKGIITRFVIGRSANRGDSLDQDIDSENKQTNDFFILDHHVEAPKEFPNKAKLFFAY 120
             NEKGI+ RFVIGRSAN GDSLD+ ID EN+QTNDF ILD+HVEA +EFP KAKLFFA+
Sbjct: 151 MANEKGIVARFVIGRSANWGDSLDKAIDDENRQTNDFIILDNHVEATEEFPKKAKLFFAH 210

Query: 121 AVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDKPRVYIGCMKSGDVFSEPGHKWYEPDW 180
           AVDKWDAE+YAKVND++YVNID+LG TLAT LDKPRVYIGCMKSG+VFSEP HKWYEPDW
Sbjct: 211 AVDKWDAEFYAKVNDNIYVNIDALGTTLATQLDKPRVYIGCMKSGEVFSEPSHKWYEPDW 270

Query: 181 WKFGDKKLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGLDVKYLNEG 240
           WKFGDKK Y RHASGEMYVISRALAKF+SINR IL T AHDDVSAGSWF+GLDVK+++EG
Sbjct: 271 WKFGDKKSYLRHASGEMYVISRALAKFVSINRDILHTCAHDDVSAGSWFIGLDVKHVDEG 330

Query: 241 KFCCSSWSSGAICAGV 256
           KFCCSSWSSGAICAGV
Sbjct: 331 KFCCSSWSSGAICAGV 346

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449456353|ref|XP_004145914.1| PREDICTED: probable beta-1,3-galactosyltransferase 11-like [Cucumis sativus] gi|449497292|ref|XP_004160363.1| PREDICTED: probable beta-1,3-galactosyltransferase 11-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356515999|ref|XP_003526684.1| PREDICTED: probable beta-1,3-galactosyltransferase 11-like [Glycine max] Back     alignment and taxonomy information
>gi|356509308|ref|XP_003523392.1| PREDICTED: probable beta-1,3-galactosyltransferase 11-like [Glycine max] Back     alignment and taxonomy information
>gi|224072087|ref|XP_002303622.1| predicted protein [Populus trichocarpa] gi|222841054|gb|EEE78601.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297742294|emb|CBI34443.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224116934|ref|XP_002331850.1| predicted protein [Populus trichocarpa] gi|222875088|gb|EEF12219.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225426048|ref|XP_002274812.1| PREDICTED: probable beta-1,3-galactosyltransferase 11-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297796171|ref|XP_002865970.1| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297311805|gb|EFH42229.1| galactosyltransferase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18423501|ref|NP_568791.1| putative beta-1,3-galactosyltransferase 11 [Arabidopsis thaliana] gi|75165503|sp|Q94F27.1|B3GTB_ARATH RecName: Full=Probable beta-1,3-galactosyltransferase 11 gi|14423410|gb|AAK62387.1|AF386942_1 Avr9 elicitor response protein-like [Arabidopsis thaliana] gi|20148409|gb|AAM10095.1| Avr9 elicitor response protein-like [Arabidopsis thaliana] gi|332008958|gb|AED96341.1| putative beta-1,3-galactosyltransferase 11 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query256
TAIR|locus:2154247338 AT5G53340 [Arabidopsis thalian 1.0 0.757 0.687 3.1e-99
TAIR|locus:2116627345 AT4G32120 [Arabidopsis thalian 0.976 0.724 0.464 4.7e-64
TAIR|locus:2038031399 AT1G32930 [Arabidopsis thalian 0.933 0.598 0.477 5.5e-61
TAIR|locus:2059531346 AT2G25300 [Arabidopsis thalian 0.976 0.722 0.448 1.2e-60
TAIR|locus:2062545409 AT2G32430 [Arabidopsis thalian 0.882 0.552 0.502 2.4e-60
TAIR|locus:2207225407 AT1G05170 [Arabidopsis thalian 0.882 0.555 0.502 6.4e-60
TAIR|locus:505006138398 DD46 [Arabidopsis thaliana (ta 0.843 0.542 0.513 7.3e-59
TAIR|locus:2116452407 AT4G26940 [Arabidopsis thalian 0.875 0.550 0.491 6.6e-58
TAIR|locus:2029471393 AT1G77810 [Arabidopsis thalian 0.843 0.549 0.504 4.6e-57
TAIR|locus:2027352384 AT1G11730 [Arabidopsis thalian 0.957 0.638 0.465 6.8e-56
TAIR|locus:2154247 AT5G53340 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 985 (351.8 bits), Expect = 3.1e-99, P = 3.1e-99
 Identities = 176/256 (68%), Positives = 209/256 (81%)

Query:     1 MQLAAAGQEGFXXXXXXXXXXXXXXXRPLVVIGILTRFGRKNNRDAIRKAWMGTGAALKK 60
             M+L++A QEGF               RPLVVIGI+T  G K  RDA+R+AWMGTGA+LKK
Sbjct:    83 MELSSARQEGFVSKSPKLADGTETKKRPLVVIGIMTSLGNKKKRDAVRQAWMGTGASLKK 142

Query:    61 RENEKGIITRFVIGRSANRGDSLDQDIDSENKQTNDFFILDHHVEAPKEFPNKAKLFFAY 120
              E+EKG+I RFVIGRSAN+GDS+D+ ID+EN QT+DF ILD  VEAP+E   K KLFFAY
Sbjct:   143 LESEKGVIARFVIGRSANKGDSMDKSIDTENSQTDDFIILDDVVEAPEEASKKVKLFFAY 202

Query:   121 AVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDKPRVYIGCMKSGDVFSEPGHKWYEPDW 180
             A D+WDA++YAK  D++YVNID+LG TLA HL+ PR YIGCMKSG+VFSEP HKWYEP+W
Sbjct:   203 AADRWDAQFYAKAIDNIYVNIDALGTTLAAHLENPRAYIGCMKSGEVFSEPNHKWYEPEW 262

Query:   181 WKFGDKKLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGLDVKYLNEG 240
             WKFGDKK YFRHA GEMYVI+ ALA+F+SINR IL +YAHDDVS GSWF+GLDVK+++EG
Sbjct:   263 WKFGDKKAYFRHAYGEMYVITHALARFVSINRDILHSYAHDDVSTGSWFVGLDVKHVDEG 322

Query:   241 KFCCSSWSSGAICAGV 256
             KFCCS+WSS AICAGV
Sbjct:   323 KFCCSAWSSEAICAGV 338
GO:0005794 "Golgi apparatus" evidence=ISM;IDA
GO:0006486 "protein glycosylation" evidence=IEA
GO:0008378 "galactosyltransferase activity" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS
GO:0030244 "cellulose biosynthetic process" evidence=RCA
GO:0048193 "Golgi vesicle transport" evidence=RCA
GO:0005768 "endosome" evidence=IDA
GO:0005802 "trans-Golgi network" evidence=IDA
TAIR|locus:2116627 AT4G32120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2038031 AT1G32930 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2059531 AT2G25300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2062545 AT2G32430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2207225 AT1G05170 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006138 DD46 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116452 AT4G26940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029471 AT1G77810 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027352 AT1G11730 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q94F27B3GTB_ARATH2, ., 4, ., 1, ., -0.70701.00.7573yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pm.C_LG_III0447
hypothetical protein (344 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query256
PLN03193408 PLN03193, PLN03193, beta-1,3-galactosyltransferase 2e-87
pfam01762196 pfam01762, Galactosyl_T, Galactosyltransferase 3e-38
PLN03133636 PLN03133, PLN03133, beta-1,3-galactosyltransferase 2e-04
>gnl|CDD|178735 PLN03193, PLN03193, beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information 
 Score =  264 bits (677), Expect = 2e-87
 Identities = 131/268 (48%), Positives = 178/268 (66%), Gaps = 17/268 (6%)

Query: 1   MQLAAA--GQEGFKSKGSTDTDD-----KDPKKRPLVVIGILTRFGRKNNRDAIRKAWMG 53
           M+LAAA   QE   + GS  ++D        K+R L+V+GI T F  +  RD++R  WM 
Sbjct: 106 MELAAARAAQESILN-GSPISEDLKKTQSSGKRRYLMVVGINTAFSSRKRRDSVRATWMP 164

Query: 54  TGAALKKRENEKGIITRFVIGRSANRGDSLDQDIDSENKQTNDFFILDHHVEAPKEFPNK 113
            G   KK E EKGII RFVIG SA  G  LD+ I++E+++  DF  LDH VE   E   K
Sbjct: 165 QGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLDH-VEGYLELSAK 223

Query: 114 AKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDKPRVYIGCMKSGDVFSEPGH 173
            K +FA AV  WDA++Y KV+DDV+VNI +LG TL  H  KPRVYIGCMKSG V S+ G 
Sbjct: 224 TKTYFATAVAMWDADFYVKVDDDVHVNIATLGETLVRHRKKPRVYIGCMKSGPVLSQKGV 283

Query: 174 KWYEPDWWKFGDK-KLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGL 232
           +++EP++WKFG+    YFRHA+G++Y IS+ LA +ISIN+ +L  YA++DVS GSWF+GL
Sbjct: 284 RYHEPEYWKFGENGNKYFRHATGQLYAISKDLASYISINQHVLHKYANEDVSLGSWFIGL 343

Query: 233 DVKYLNEGKFCCSS-----W--SSGAIC 253
           DV+++++ + CC +     W   +G IC
Sbjct: 344 DVEHIDDRRLCCGTPPDCEWKAQAGNIC 371

Length = 408
>gnl|CDD|216686 pfam01762, Galactosyl_T, Galactosyltransferase Back     alignment and domain information
>gnl|CDD|215596 PLN03133, PLN03133, beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 256
PLN03193408 beta-1,3-galactosyltransferase; Provisional 100.0
PLN03133636 beta-1,3-galactosyltransferase; Provisional 100.0
KOG2287349 consensus Galactosyltransferases [Carbohydrate tra 100.0
PF01762195 Galactosyl_T: Galactosyltransferase; InterPro: IPR 100.0
KOG2288274 consensus Galactosyltransferases [Carbohydrate tra 100.0
PTZ00210382 UDP-GlcNAc-dependent glycosyltransferase; Provisio 100.0
PF02434252 Fringe: Fringe-like; InterPro: IPR003378 The Notch 99.89
KOG2246364 consensus Galactosyltransferases [Carbohydrate tra 99.71
PLN03153 537 hypothetical protein; Provisional 99.51
KOG3708 681 consensus Uncharacterized conserved protein [Funct 97.52
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 97.36
TIGR03472 373 HpnI hopanoid biosynthesis associated glycosyl tra 96.99
TIGR03469 384 HonB hopene-associated glycosyltransferase HpnB. T 96.69
PF01755200 Glyco_transf_25: Glycosyltransferase family 25 (LP 96.68
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 96.68
PRK11204 420 N-glycosyltransferase; Provisional 95.91
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 95.89
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 95.69
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 95.47
PF13506175 Glyco_transf_21: Glycosyl transferase family 21 95.3
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 95.25
PRK14583 444 hmsR N-glycosyltransferase; Provisional 95.09
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 95.04
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 94.9
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 94.72
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 94.66
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 94.43
cd06532128 Glyco_transf_25 Glycosyltransferase family 25 [lip 94.18
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 94.07
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 94.03
TIGR03111 439 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 93.54
cd06423180 CESA_like CESA_like is the cellulose synthase supe 93.46
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 93.18
PF04646 255 DUF604: Protein of unknown function, DUF604; Inter 93.18
COG1215 439 Glycosyltransferases, probably involved in cell wa 92.97
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 92.82
PF13632193 Glyco_trans_2_3: Glycosyl transferase family group 92.64
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 92.58
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 92.13
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 91.57
COG1216305 Predicted glycosyltransferases [General function p 91.3
PF10111281 Glyco_tranf_2_2: Glycosyltransferase like family 2 91.11
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 90.74
cd06442224 DPM1_like DPM1_like represents putative enzymes si 90.19
TIGR03030 713 CelA cellulose synthase catalytic subunit (UDP-for 90.06
cd04191254 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon 89.06
PRK10714 325 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi 88.14
cd06437232 CESA_CaSu_A2 Cellulose synthase catalytic subunit 86.98
PRK14716 504 bacteriophage N4 adsorption protein B; Provisional 85.51
cd02514 334 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es 84.13
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 80.74
cd04179185 DPM_DPG-synthase_like DPM_DPG-synthase_like is a m 80.54
PRK11234 727 nfrB bacteriophage N4 adsorption protein B; Provis 80.03
>PLN03193 beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=4.1e-61  Score=434.92  Aligned_cols=253  Identities=48%  Similarity=0.874  Sum_probs=216.1

Q ss_pred             CccccchhcCc--cCCCCCC----CCCCCCCCCceEEEEEEcCCCChhhHHHHHHHhhcCchhhhcccCCCcEEEEEEee
Q 025192            1 MQLAAAGQEGF--KSKGSTD----TDDKDPKKRPLVVIGILTRFGRKNNRDAIRKAWMGTGAALKKRENEKGIITRFVIG   74 (256)
Q Consensus         1 ~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~lli~V~S~~~~~~rR~aIR~TW~~~~~~l~~~~~~~~i~~~FvvG   74 (256)
                      |.+|+|-+.++  +++.+++    ..+...+++++|+|+|+|+|+|++||++||+||++....+.+++...+++++|++|
T Consensus       106 ~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LvIgI~Sap~~~~RR~AIR~TWg~~~~~~~kle~~~gv~vrFVIG  185 (408)
T PLN03193        106 MELAAARAAQESILNGSPISEDLKKTQSSGKRRYLMVVGINTAFSSRKRRDSVRATWMPQGEKRKKLEEEKGIIIRFVIG  185 (408)
T ss_pred             HHHHHHHhhhhhhccCCCccccccccCCCCcceEEEEEEEeCCCCCHHHHHHHHHHHcCCcccccccccCCcEEEEEEee
Confidence            45677766555  4332222    33556777899999999999999999999999999765444455567899999999


Q ss_pred             ecCCCCCcchhhhhhHHhhCCceeeeCCCCCCCCCchHHHHHHHHHHHhcCCeeEEEEecCeeEEeHHHHHHHHhhcCCC
Q 025192           75 RSANRGDSLDQDIDSENKQTNDFFILDHHVEAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDK  154 (256)
Q Consensus        75 ~~~~~~~~~~~~l~~E~~~~~DIl~~~d~~D~y~nl~~K~~~~l~w~~~~~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~  154 (256)
                      .+.+.++.+++.|++|+++|||||++ ||.|+|.||++||+++|+|+.++|+++|++|+|||+|||+++|+.+|......
T Consensus       186 ~s~~~~~~ldr~Le~Ea~~ygDIL~l-DfvDsY~NLT~KTl~~f~wA~~~~dAkF~mK~DDDvfVnv~~L~~~L~~~~~~  264 (408)
T PLN03193        186 HSATSGGILDRAIEAEDRKHGDFLRL-DHVEGYLELSAKTKTYFATAVAMWDADFYVKVDDDVHVNIATLGETLVRHRKK  264 (408)
T ss_pred             cCCCcchHHHHHHHHHHHHhCCEEEE-ecccccccchHHHHHHHHHHHHcCCCeEEEEcCCCceEcHHHHHHHHHhcCCC
Confidence            98753357888999999999999988 89999999999999999999999999999999999999999999999887666


Q ss_pred             CceEEEEeecCcceecC-CCCcccCCcccCC-CCCCccccccCCeeeecHHHHHHHHHhcCccCCCccChHHHHHHHhhC
Q 025192          155 PRVYIGCMKSGDVFSEP-GHKWYEPDWWKFG-DKKLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGL  232 (256)
Q Consensus       155 ~~~y~G~~~~~~p~r~~-~~k~~~~~~~~~y-~~~~yP~y~~G~gyvlS~~~v~~l~~~~~~~~~~~~EDv~iG~~l~~l  232 (256)
                      +++|+|++..+ |+|++ ..||+.|++|++. +.+.|||||+|+|||||+++++.|+.++..++.+++|||++|+|+.+|
T Consensus       265 ~rlYiG~m~~g-Pvr~~~~~ky~epe~w~~~~~~~~YPpyAsG~gYVlS~DLa~~I~~n~~~L~~y~~EDV~vG~Wl~~L  343 (408)
T PLN03193        265 PRVYIGCMKSG-PVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAISKDLASYISINQHVLHKYANEDVSLGSWFIGL  343 (408)
T ss_pred             CCEEEEecccC-ccccCCCCcCcCcccccccCccccCCCCCCcceEEehHHHHHHHHhChhhhcccCcchhhhhhHhccC
Confidence            68999999766 55654 6667778777654 679999999999999999999999988889999999999999999999


Q ss_pred             CCeEecCCCeecCCCCC-------CCcccC
Q 025192          233 DVKYLNEGKFCCSSWSS-------GAICAG  255 (256)
Q Consensus       233 ~v~~~~~~~f~~~~~~~-------~~~~~~  255 (256)
                      +|+++|+++||+++++.       +++|+.
T Consensus       344 ~V~~vdd~~fcc~~~~~C~~~~~~~~~c~~  373 (408)
T PLN03193        344 DVEHIDDRRLCCGTPPDCEWKAQAGNICVA  373 (408)
T ss_pred             CceeeecccccCCCCccccccccCCCeeEE
Confidence            99999999999987655       788874

>PLN03133 beta-1,3-galactosyltransferase; Provisional Back     alignment and domain information
>KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>KOG2288 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PTZ00210 UDP-GlcNAc-dependent glycosyltransferase; Provisional Back     alignment and domain information
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms [] Back     alignment and domain information
>KOG2246 consensus Galactosyltransferases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03153 hypothetical protein; Provisional Back     alignment and domain information
>KOG3708 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>PF01755 Glyco_transf_25: Glycosyltransferase family 25 (LPS biosynthesis protein); InterPro: IPR002654 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>PF13506 Glyco_transf_21: Glycosyl transferase family 21 Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>cd06532 Glyco_transf_25 Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>PF04646 DUF604: Protein of unknown function, DUF604; InterPro: IPR006740 This family includes a conserved region found in several uncharacterised plant proteins Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>COG1216 Predicted glycosyltransferases [General function prediction only] Back     alignment and domain information
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 Back     alignment and domain information
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan Back     alignment and domain information
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional Back     alignment and domain information
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex Back     alignment and domain information
>PRK14716 bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily Back     alignment and domain information
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query256
2j0a_A280 Beta-1,3-N-acetylglucosaminyltransferase manic FR; 99.96
1xhb_A 472 Polypeptide N-acetylgalactosaminyltransferase 1; g 96.27
2d7i_A 570 Polypeptide N-acetylgalactosaminyltransferase 10; 96.26
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 96.02
2ffu_A 501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 95.45
3bcv_A240 Putative glycosyltransferase protein; protein stru 95.22
2z86_A 625 Chondroitin synthase; GT-A, glycosyltransferase A, 95.04
4fix_A 657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 94.77
4hg6_A 802 Cellulose synthase subunit A; membrane translocati 92.0
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 91.43
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A* Back     alignment and structure
Probab=99.96  E-value=2.4e-28  Score=215.29  Aligned_cols=198  Identities=16%  Similarity=0.152  Sum_probs=134.4

Q ss_pred             CCCCCceEEEEEEcCCC-ChhhHHHHHHHhhcCchhhhcccCCCcEEEEEEeeecCCCCCcchhhhhhHHhhCCceeeeC
Q 025192           23 DPKKRPLVVIGILTRFG-RKNNRDAIRKAWMGTGAALKKRENEKGIITRFVIGRSANRGDSLDQDIDSENKQTNDFFILD  101 (256)
Q Consensus        23 ~~~~~~~lli~V~S~~~-~~~rR~aIR~TW~~~~~~l~~~~~~~~i~~~FvvG~~~~~~~~~~~~l~~E~~~~~DIl~~~  101 (256)
                      .....-.|+|+|+|+++ +.+||++||+||++....           .+||.+...+      +.+...  ..++++. .
T Consensus         8 ~~~~~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~-----------~~fifsd~~d------~~l~~~--~~~~~~~-~   67 (280)
T 2j0a_A            8 LELQLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQ-----------QTFIFTDSPD------ERLQER--LGPHLVV-T   67 (280)
T ss_dssp             -CCCGGGEEEEEECCGGGTTTTHHHHHHTGGGGSGG-----------GEEEEESSCC------HHHHHH--HGGGEEE-C
T ss_pred             CCCCcccEEEEEECcHHHHHHHHHHHHHHHhccCCC-----------ceEEEcCCCc------cccccc--cccccee-c
Confidence            34456689999999998 456889999999987631           1233333222      223322  2456664 3


Q ss_pred             CCCC--CCCCchHHHHHHHHHHHhcCCeeEEEEecCeeEEeHHHHHHHHhhcCCCCceEEEEeecCcceecCCCCcccCC
Q 025192          102 HHVE--APKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDKPRVYIGCMKSGDVFSEPGHKWYEPD  179 (256)
Q Consensus       102 d~~D--~y~nl~~K~~~~l~w~~~~~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~~~y~G~~~~~~p~r~~~~k~~~~~  179 (256)
                      ++.+  ++.+++.|+...+++... ++++|++|+|||+||++++|+++|...++++++|+|+.....|+|.   +++++.
T Consensus        68 ~~~~~~~~~~l~~K~~~~~~~~l~-~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~~~---~~~~~~  143 (280)
T 2j0a_A           68 QCSAEHSHPALSCKMAAEFDAFLV-SGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPIHA---SELQSK  143 (280)
T ss_dssp             CC-------CCCHHHHHHHHHHHH-HTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC---------------
T ss_pred             cccccccccchHHHHHHHHHHHhC-CCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCccccc---cccCcc
Confidence            6644  678899999999987642 4899999999999999999999999999999999999765556552   344443


Q ss_pred             cccCCCCCCccccc-cCCeeeecHHHHHHHHHhcCcc-------CCCccChHHHHHHHh-hCCCeEecCCCeecCCC
Q 025192          180 WWKFGDKKLYFRHA-SGEMYVISRALAKFISINRSIL-------RTYAHDDVSAGSWFL-GLDVKYLNEGKFCCSSW  247 (256)
Q Consensus       180 ~~~~y~~~~yP~y~-~G~gyvlS~~~v~~l~~~~~~~-------~~~~~EDv~iG~~l~-~l~v~~~~~~~f~~~~~  247 (256)
                      +  .++...| +|| +|+||+||++++++|+......       .....||+++|+|+. .+||.+.++++|++..+
T Consensus       144 ~--~~~~~~~-~y~~GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~~~~  217 (280)
T 2j0a_A          144 Q--RTKLVRF-WFATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSHLE  217 (280)
T ss_dssp             ---------C-CEECGGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCCSSS
T ss_pred             c--ccccccc-CcccCCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecccccCCCc
Confidence            2  2222345 466 5789999999999999753322       223479999999998 99999999999998876
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query256
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 95.45
d1omza_265 Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga 91.76
d1qg8a_255 Spore coat polysaccharide biosynthesis protein Sps 82.28
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.45  E-value=0.18  Score=41.46  Aligned_cols=120  Identities=11%  Similarity=0.055  Sum_probs=67.5

Q ss_pred             HHHHHHHhcCCeeEEEEecCeeEEeHHHHHHHHhhcCCCC-ceEEEEee--cC---------cceecC-----CCCcc-c
Q 025192          116 LFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDKP-RVYIGCMK--SG---------DVFSEP-----GHKWY-E  177 (256)
Q Consensus       116 ~~l~w~~~~~~~~~vlk~DDD~~vn~~~L~~~L~~~~~~~-~~y~G~~~--~~---------~p~r~~-----~~k~~-~  177 (256)
                      .+.....+..+.+|++.+|+|+.+.++.|..++......+ .+.+|.+.  ..         ...+..     ...|. .
T Consensus        97 ~a~N~Gi~~a~gd~i~flD~D~~~~p~~l~~l~~~~~~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (328)
T d1xhba2          97 RARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPV  176 (328)
T ss_dssp             HHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEEC
T ss_pred             HHHHHHHHhhhcceeeecCcccccChhHHHHHHHHHhcCCCeEEecceeeeccCceeeccCCcccccccccccccccccc
Confidence            3556667777899999999999999887777665432222 22223211  00         000100     00111 0


Q ss_pred             CC-----cccCCCCCCccccccCCeeeecHHHHHHHHHhcCccCCCccChHHHHHHHhhCCCe
Q 025192          178 PD-----WWKFGDKKLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGLDVK  235 (256)
Q Consensus       178 ~~-----~~~~y~~~~yP~y~~G~gyvlS~~~v~~l~~~~~~~~~~~~EDv~iG~~l~~l~v~  235 (256)
                      +.     ....+.....-+++.|+++++++++...+----+.+.....||+-++.-+...|.+
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~vGgfDe~~~~~g~ED~Dl~~R~~~~G~~  239 (328)
T d1xhba2         177 PQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGT  239 (328)
T ss_dssp             CHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCE
T ss_pred             chhhhhccccccccccccceecceeeeeeHHHHHHhCCCCCCCcCcCchHHHHHHHHHHhCCe
Confidence            00     00000112233578899999999999988543334444457999888777666633
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure