Citrus Sinensis ID: 025216

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250------

MLSILCKNYNNLRQQYMDLMNKNTENEVGISKKRKAESEDHCHTIGFNVHATESSTSTDEESCKRPKDNNTKAKVSRFYVRASDSNSTLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSKAELSLSPSHVATIGNPIHVSAASSMLSASPTATLDMIQPGFLFDDAKKSSVQQIEAPAIHQILVQQMASNLTKDPNFTAALAAAISGRFADQARTQRWSL

cHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccEEEEEECccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccccccccccccc

MLSILCKNYN*******************************************************************FYVRASDSNSTLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEH********************************************************************HQ****QMASNLTKDPNFTAALAAAIS**************

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MxxxxxxxxxxxxxxxxxxxxxNTENEVGISKKRKAESEDHCHTIGFNVHATESSTSTDEESCKRPKDNNTKAKVSRFYVRASDSNSTLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSKAELSLSPSHVATIGNPIHVSAASSMLSASPTATLDMIQPGFLFDDAKKSSVQQIEAPAIHQILVQQMASNLTKDPNFTAALAAAISGRFADQARTQRWSL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Probable WRKY transcription factor 40	Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.	probable	Q9SAH7

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2AYD, chain A
Confidence level:very confident
Coverage over the Query: 76-153
View the alignment between query and template
View the model in PyMOL