Citrus Sinensis ID: 025260

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-----
Protein Sequence
MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLVMIQSS
Secondary Structure (PSIPRED)
cccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHHHccEEEEEEEEccccccHHHHHHHHHHHccccEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHccccccEEEEEccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHcccEEEEEEEEcccHHHHHHHHHHHHHHHccccEEEEEEcccccccccEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEEEcccHcHHHHHHHHHcHHHHHHHHHHHHHHcccEEEEEccccEccHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mescflntlktqPLWLLALFTIGSLSVLRLAFVILNWVYVNFLrpaknlrkygswalvtgptdgigKSFAFQLAKTGLNLvlvgrnpdklkdvSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINnvgisypyarfFHEVDQVLLKNLIKVNVEGTTKVTQAVLPgmlkrkkgaivnigsgaaivipsdplysVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLVMIQSS
Flexible Loop (DISEMBL)
MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAkyaktqiksvvvDFSGDLDEGVERIKEaiegldvgvLINNVGISYPYARFFHEVDQVLLKNLIKvnvegttkvtqavlpgmlkrKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLVMIQSS
Low Complexity Region (SEG)
MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLVMIQSS
Disordered region (IsUnstruct)
***CFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLVMI***
Disordered Region (DISOPRED)
***C***TLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN*LV*****
Disordered Region (DISEMBL)
MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLVMIQSS
Disordered Region (DISPRO)
*ESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLVM****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
ooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLVMIQSS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	255	2.2.26 [Sep-21-2011]
Q8L9C4	318	Very-long-chain 3-oxoacyl	yes	no	0.921	0.738	0.708	1e-101
Q9FYL6	312	Very-long-chain 3-oxoacyl	no	no	0.886	0.724	0.545	2e-67
A8N6B4	339	Very-long-chain 3-oxoacyl	N/A	no	0.874	0.657	0.408	2e-44
Q6P7R8	312	Estradiol 17-beta-dehydro	yes	no	0.733	0.599	0.463	2e-42
O70503	312	Estradiol 17-beta-dehydro	yes	no	0.733	0.599	0.448	4e-41
Q4R5G7	312	Estradiol 17-beta-dehydro	N/A	no	0.725	0.592	0.442	9e-41
Q8AVY8	318	Estradiol 17-beta-dehydro	N/A	no	0.827	0.663	0.417	2e-40
Q53GQ0	312	Estradiol 17-beta-dehydro	yes	no	0.725	0.592	0.432	2e-40
Q2UET3	346	Very-long-chain 3-oxoacyl	yes	no	0.929	0.684	0.372	2e-40
A5PJF6	330	Inactive hydroxysteroid d	yes	no	0.890	0.687	0.377	5e-40

>sp|Q8L9C4|KCR1_ARATH Very-long-chain 3-oxoacyl-CoA reductase 1 OS=Arabidopsis thaliana GN=KCR1 PE=1 SV=1

 Score =  367 bits (943), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 168/237 (70%), Positives = 206/237 (86%), Gaps = 2/237 (0%)

Query: 1   MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTG 60
           ME C     K+QP WLL LF +GS+S+ +  F +L   Y+ FLRP+KNLR+YGSWA++TG
Sbjct: 1   MEIC--TYFKSQPTWLLILFVLGSISIFKFIFTLLRSFYIYFLRPSKNLRRYGSWAIITG 58

Query: 61  PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEG 120
           PTDGIGK+FAFQLA+ GLNL+LV RNPDKLKDVSDSI++KY++TQI +VV+DFSGD+DEG
Sbjct: 59  PTDGIGKAFAFQLAQKGLNLILVARNPDKLKDVSDSIRSKYSQTQILTVVMDFSGDIDEG 118

Query: 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGM 180
           V+RIKE+IEGLDVG+LINN G+SYPYA++FHEVD+ L+ NLIK+NVEGTTKVTQAVLP M
Sbjct: 119 VKRIKESIEGLDVGILINNAGMSYPYAKYFHEVDEELINNLIKINVEGTTKVTQAVLPNM 178

Query: 181 LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQV 237
           LKRKKGAI+N+GSGAA +IPS P YSVYA  K Y+DQF++ L+VEY+KSGIDVQCQV
Sbjct: 179 LKRKKGAIINMGSGAAALIPSYPFYSVYAGAKTYVDQFTKCLHVEYKKSGIDVQCQV 235

Beta-ketoacyl-coenzyme A reductase required for the elongation of fatty acids precursors of sphingolipids, triacylglycerols, cuticular waxes and suberin. Responsible for the first reduction step in very long-chain fatty acids (VLCFAs) synthesis. Decreased expression of KCR1 (RNAi) leads to plants with fused vegetative and reproductive organs, and abnormal trichome, epidermal cell and root morphology. Cannot be complemented by KCR2.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 3EC: 3EC: 0

>sp|Q9FYL6|KCR2_ARATH Very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470 OS=Arabidopsis thaliana GN=KCR2 PE=2 SV=1

 Score =  256 bits (653), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 125/229 (54%), Positives = 171/229 (74%), Gaps = 3/229 (1%)

Query: 10  KTQPLWLLALFTIGSLSVLRLAFV-ILNWVYVNFLRPAKNLRKYGSWALVTGPTDGIGKS 68
           ++QP +L  +  IG L +LR+ F+ +L W    FL   K L++YGSWA+VTG T+GIG++
Sbjct: 8   ESQPWYLHFVCFIGFLFLLRVLFIPLLKWFTTRFLLTPKRLKRYGSWAMVTGATEGIGRA 67

Query: 69  FAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128
           FA +LAK GLNL+LV RN  KL+ VSD  Q ++   +IK +  DFS +   G   I+E I
Sbjct: 68  FAHELAKHGLNLILVSRNLSKLESVSDDFQQEFPHIKIKIIPFDFSSEGGYGA--IEEGI 125

Query: 129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAI 188
           +GL+VG+LINNVGI+YP A FFHEVDQ+    +++VN+E TT VT++++  ML R++GAI
Sbjct: 126 KGLEVGILINNVGITYPRAMFFHEVDQLTWTKILRVNLEATTWVTRSLIGPMLHRRRGAI 185

Query: 189 VNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQV 237
           VNI SGAA+V+PS PLY++YAATKAY+D  SRSL+VEY++ GIDVQCQV
Sbjct: 186 VNISSGAAVVVPSHPLYAIYAATKAYVDALSRSLHVEYKQFGIDVQCQV 234

Probable reductase, but unlike KCR1, has no beta-ketoacyl-coenzyme A reductase activity.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|A8N6B4|MKAR_COPC7 Very-long-chain 3-oxoacyl-CoA reductase OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=CC1G_02019 PE=3 SV=1

 Score =  179 bits (454), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 94/230 (40%), Positives = 143/230 (62%), Gaps = 7/230 (3%)

Query: 9   LKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGS----WALVTGPTDG 64
           ++ QP W   L  +GS + LR+ +  L+ V   F+ P  +L+++G+    WA+VTG TDG
Sbjct: 15  IREQPCWTTFLLALGSFNALRIIYQTLSVVLQTFVLPGTSLKRFGAKKGAWAVVTGATDG 74

Query: 65  IGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERI 124
           IGK FA QL K G N++LV RNP  L   +  I+ KY K Q  +  +DF+   +E    +
Sbjct: 75  IGKEFAMQLGKAGFNVLLVARNPATLAATAGEIEQKY-KVQTGTFSIDFAAATEEKYTAL 133

Query: 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK 184
            E + GLDVGVL+NNVG S+    +  +  +  +++++++NV  T +VT A+LPGM+K K
Sbjct: 134 GEVLTGLDVGVLVNNVGKSHNMPAYLVDTPRDEMRDIVEINVNATLRVTYAILPGMVKNK 193

Query: 185 KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQ 234
           +G I+NIGS A   IPS P+ + Y+ TKA++  FS +L  E +K GI V+
Sbjct: 194 RGLILNIGSFAG-AIPS-PMLATYSGTKAFLSTFSSALGEEVKKDGIIVE 241

Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3-ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.

Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) (taxid: 240176)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q6P7R8|DHB12_RAT Estradiol 17-beta-dehydrogenase 12 OS=Rattus norvegicus GN=Hsd17b12 PE=2 SV=1

 Score =  172 bits (436), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 90/194 (46%), Positives = 136/194 (70%), Gaps = 7/194 (3%)

Query: 51  KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVV 110
           + G WA+VTG TDGIGKS+A +LAK G+ +VL+ R+ DKLK+VS++I+ K+   + +++ 
Sbjct: 48  RLGEWAVVTGGTDGIGKSYAEELAKRGMKIVLISRSQDKLKEVSNNIKEKF-NVETRTIA 106

Query: 111 VDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQV--LLKNLIKVNVEG 168
           VDFS  LD+  ++IK  + GL++GVL+NNVG+SY Y  +F E+  +   +K LI +NV  
Sbjct: 107 VDFS--LDDIYDKIKTGLSGLEIGVLVNNVGMSYEYPEYFLEIPDLDNTIKKLININVLS 164

Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
             KVT+ VLPGM++R KG I+NI S + ++    PL +VY+ATKA++D FS+ L+ EY+ 
Sbjct: 165 ICKVTRLVLPGMVERSKGVILNISSASGML--PVPLLTVYSATKAFVDFFSQCLHEEYKS 222

Query: 229 SGIDVQCQVLFLLC 242
            GI VQ  + F + 
Sbjct: 223 KGIFVQSVLPFFVA 236

Catalyzes the transformation of estrone (E1) into estradiol (E2), suggesting a central role in estrogen formation. Its strong expression in ovary and mammary gland suggest that it may constitute the major enzyme responsible for the conversion of E1 to E2 in females. Also has 3-ketoacyl-CoA reductase activity, reducing both long chain 3-ketoacyl-CoAs and long chain fatty acyl-CoAs, suggesting a role in long fatty acid elongation.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|O70503|DHB12_MOUSE Estradiol 17-beta-dehydrogenase 12 OS=Mus musculus GN=Hsd17b12 PE=2 SV=1

 Score =  168 bits (425), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 87/194 (44%), Positives = 135/194 (69%), Gaps = 7/194 (3%)

Query: 51  KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVV 110
           + G WA+VTG TDGIGK++A +LAK G+ +VL+ R+ DKL  VS++I+ K+   + +++ 
Sbjct: 48  RLGEWAVVTGGTDGIGKAYAEELAKRGMKIVLISRSQDKLNQVSNNIKEKF-NVETRTIA 106

Query: 111 VDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQV--LLKNLIKVNVEG 168
           VDFS  LD+  ++IK  + GL++GVL+NNVG+SY Y  +F E+  +   +K LI +NV  
Sbjct: 107 VDFS--LDDIYDKIKTGLSGLEIGVLVNNVGMSYEYPEYFLEIPDLDNTIKKLININVLS 164

Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
             KVT+ VLPGM++R KG I+NI S + ++    PL ++Y+ATKA++D FS+ L+ EY+ 
Sbjct: 165 VCKVTRLVLPGMVERSKGVILNISSASGML--PVPLLTIYSATKAFVDFFSQCLHEEYKS 222

Query: 229 SGIDVQCQVLFLLC 242
            GI VQ  + +L+ 
Sbjct: 223 KGIFVQSVMPYLVA 236

Catalyzes the transformation of estrone (E1) into estradiol (E2), suggesting a central role in estrogen formation. Its strong expression in ovary and mammary gland suggest that it may constitute the major enzyme responsible for the conversion of E1 to E2 in females. Also has 3-ketoacyl-CoA reductase activity, reducing both long chain 3-ketoacyl-CoAs and long chain fatty acyl-CoAs, suggesting a role in long fatty acid elongation.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q4R5G7|DHB12_MACFA Estradiol 17-beta-dehydrogenase 12 OS=Macaca fascicularis GN=HSD17B12 PE=2 SV=1

 Score =  167 bits (422), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 85/192 (44%), Positives = 133/192 (69%), Gaps = 7/192 (3%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G WA+VTG TDGIGKS+A +LAK G+ +VL+ R+ DKL  VS  I+ K+ K + +++ VD
Sbjct: 50  GEWAVVTGGTDGIGKSYAEELAKRGMKVVLISRSQDKLDQVSSEIKEKF-KVETRTIAVD 108

Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQV--LLKNLIKVNVEGTT 170
           F+  L++  ++IK  + GL++G+L+NNVG+SY Y  +F +V  +  ++K +I +N+    
Sbjct: 109 FT--LEDIYDKIKTGLAGLEIGILVNNVGMSYEYPEYFLDVPDLDNVIKKMININILSVC 166

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
           K+TQ VLPGM++R KGAI+NI SG+ +     PL ++Y+ATK ++D FS+ L+ EYR  G
Sbjct: 167 KMTQLVLPGMVERSKGAILNISSGSGMF--PVPLLTIYSATKTFVDFFSQCLHEEYRSKG 224

Query: 231 IDVQCQVLFLLC 242
           I VQ  + + + 
Sbjct: 225 IFVQSVLPYFVA 236

Catalyzes the transformation of estrone (E1) into estradiol (E2), suggesting a central role in estrogen formation. Its strong expression in ovary and mammary gland suggest that it may constitute the major enzyme responsible for the conversion of E1 to E2 in females. Also has 3-ketoacyl-CoA reductase activity, reducing both long chain 3-ketoacyl-CoAs and long chain fatty acyl-CoAs, suggesting a role in long fatty acid elongation.

Macaca fascicularis (taxid: 9541)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q8AVY8|DH12B_XENLA Estradiol 17-beta-dehydrogenase 12-B OS=Xenopus laevis GN=hsd17b12-b PE=2 SV=1

 Score =  166 bits (420), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 91/218 (41%), Positives = 137/218 (62%), Gaps = 7/218 (3%)

Query: 28  LRLAFVILNWVYVNFLRPAKNL-RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN 86
           LR A+ +LN   V  L     +    G WA+VTG TDGIGK++A +LA+ G+N+VL+ R+
Sbjct: 28  LRAAWCLLNGARVWVLGSGAQVGPTIGKWAVVTGATDGIGKAYAEELARRGMNIVLISRS 87

Query: 87  PDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPY 146
           P+KL++ +  I+ K+ K + K +  DF G   E  ERI+  +  L++GVL+NNVGISY Y
Sbjct: 88  PEKLEEAAIHIKQKF-KVETKIIAADF-GKPTEIYERIEAGLRDLEIGVLVNNVGISYEY 145

Query: 147 ARFFHEVDQV--LLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL 204
             +F E+  +   L  +I +N+    ++T+ VLPGML R KG ++NI S + +     PL
Sbjct: 146 PEYFLEIPDLENTLDKMININIMSVCQMTRLVLPGMLGRGKGVVLNISSASGMY--PVPL 203

Query: 205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLC 242
            +VY+ATKA++D FSR L+ EYR  G+ VQ  + F + 
Sbjct: 204 LTVYSATKAFVDFFSRGLHAEYRSKGVTVQSVLPFFVA 241

Catalyzes the transformation of estrone (E1) into estradiol (E2), suggesting a central role in estrogen formation.

Xenopus laevis (taxid: 8355)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 2

>sp|Q53GQ0|DHB12_HUMAN Estradiol 17-beta-dehydrogenase 12 OS=Homo sapiens GN=HSD17B12 PE=1 SV=2

 Score =  166 bits (419), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 83/192 (43%), Positives = 133/192 (69%), Gaps = 7/192 (3%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G WA+VTG TDGIGKS+A +LAK G+ +VL+ R+ DKL  VS  I+ K+ K + +++ VD
Sbjct: 50  GEWAVVTGSTDGIGKSYAEELAKHGMKVVLISRSKDKLDQVSSEIKEKF-KVETRTIAVD 108

Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQV--LLKNLIKVNVEGTT 170
           F+   ++  ++IK  + GL++G+L+NNVG+SY Y  +F +V  +  ++K +I +N+    
Sbjct: 109 FAS--EDIYDKIKTGLAGLEIGILVNNVGMSYEYPEYFLDVPDLDNVIKKMININILSVC 166

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
           K+TQ VLPGM++R KGAI+NI SG+ ++    PL ++Y+ATK ++D FS+ L+ EYR  G
Sbjct: 167 KMTQLVLPGMVERSKGAILNISSGSGML--PVPLLTIYSATKTFVDFFSQCLHEEYRSKG 224

Query: 231 IDVQCQVLFLLC 242
           + VQ  + + + 
Sbjct: 225 VFVQSVLPYFVA 236

Catalyzes the transformation of estrone (E1) into estradiol (E2), suggesting a central role in estrogen formation. Its strong expression in ovary and mammary gland suggest that it may constitute the major enzyme responsible for the conversion of E1 to E2 in women. Also has 3-ketoacyl-CoA reductase activity, reducing both long chain 3-ketoacyl-CoAs and long chain fatty acyl-CoAs, suggesting a role in long fatty acid elongation.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q2UET3|MKAR_ASPOR Very-long-chain 3-oxoacyl-CoA reductase OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=AO090026000492 PE=3 SV=1

 Score =  166 bits (419), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 92/247 (37%), Positives = 144/247 (58%), Gaps = 10/247 (4%)

Query: 3   SCFLN-TLKTQPLWLLA----LFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYG---S 54
           +C  N  L   P W       L   GSL V   A   +  +   F+ P K+LR +G   S
Sbjct: 9   TCLSNLELNLAPGWQTVSAYFLLAAGSLFVASRALTFVRVLLSLFVLPGKSLRSFGPKGS 68

Query: 55  WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           WA+VTG +DG+GK F+ QLA+ G N+VLV R   KL  +SD I +KYA  Q K++ +DF+
Sbjct: 69  WAVVTGASDGLGKEFSLQLARAGFNIVLVSRTASKLTTLSDEITSKYASVQTKTLAMDFA 128

Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
            + D   E++K  ++ LDV +L+NNVG S+     F    Q  + ++I +N  GT + TQ
Sbjct: 129 RNEDSDYEKLKALVDELDVAILVNNVGKSHDIPTPFALTSQEEMTDIITINCMGTLRATQ 188

Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQ 234
            ++PGM++RK+G I+ +GS   + +P+ PL + Y+ +KA++ Q+S +L  E  + GI V+
Sbjct: 189 LIVPGMMQRKRGLILTMGSFGGL-LPT-PLLATYSGSKAFLQQWSTALGSELEEHGITVE 246

Query: 235 CQVLFLL 241
               +L+
Sbjct: 247 LVQAYLI 253

Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3-ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.

Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|A5PJF6|HSDL1_BOVIN Inactive hydroxysteroid dehydrogenase-like protein 1 OS=Bos taurus GN=HSDL1 PE=2 SV=1

 Score =  164 bits (415), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 91/241 (37%), Positives = 145/241 (60%), Gaps = 14/241 (5%)

Query: 3   SCFLNTLKTQPLWLLALFTIGSL----SVLRLAFVILNWVYVNFLRPAKNLRKYGSWALV 58
           +C++  L     W  A  +I  +    S++RL F+         +  A  +++YG WA+V
Sbjct: 19  NCYIEALALVGAWYTARKSITVVCDFYSLIRLHFI------PRLVSRADLIKQYGRWAVV 72

Query: 59  TGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLD 118
           +G TDGIG+++A +LA  GLN+VL+ R+ +KL+ V+  I   Y K +   +V DFS    
Sbjct: 73  SGATDGIGRAYAEELASRGLNIVLISRSQEKLQMVAKDIADTY-KVETDIIVADFSSG-R 130

Query: 119 EGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLP 178
           E  + I+EA++  D+G+L+NNVG+ YPY ++F +V +  L +++ VN+   + +   VLP
Sbjct: 131 EIYDMIREALQDRDIGILVNNVGVFYPYPQYFTQVSEDTLWDIVNVNIAAASLMVHIVLP 190

Query: 179 GMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVL 238
           GM++RKKGAIV I SG+       P  + ++A+KAY+D FSR+L  EY   GI VQ  + 
Sbjct: 191 GMVERKKGAIVTISSGSC--CKPTPQLAAFSASKAYLDHFSRALQYEYASKGIFVQSLIP 248

Query: 239 F 239
           F
Sbjct: 249 F 249

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	255
62956018	320	3-ketoacyl-CoA reductase 1 [Gossypium hi	0.929	0.740	0.831	1e-113
224107711	320	predicted protein [Populus trichocarpa]	0.929	0.740	0.822	1e-112
255547948	320	steroid dehydrogenase, putative [Ricinus	0.929	0.740	0.848	1e-109
357463161	320	Short-chain dehydrogenase/reductase [Med	0.929	0.740	0.801	1e-109
388519619	320	unknown [Medicago truncatula]	0.929	0.740	0.801	1e-109
225424552	320	PREDICTED: estradiol 17-beta-dehydrogena	0.929	0.740	0.818	1e-109
359806497	320	uncharacterized protein LOC100817128 [Gl	0.929	0.740	0.810	1e-105
449450411	320	PREDICTED: very-long-chain 3-oxoacyl-CoA	0.929	0.740	0.805	1e-104
356540201	320	PREDICTED: estradiol 17-beta-dehydrogena	0.929	0.740	0.797	1e-103
224100105	320	predicted protein [Populus trichocarpa]	0.913	0.728	0.828	1e-101

>gi|62956018|gb|AAY23354.1| 3-ketoacyl-CoA reductase 1 [Gossypium hirsutum]

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 197/237 (83%), Positives = 219/237 (92%)

Query: 1   MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTG 60
           ME+CF +TLK QP W++ LFT+GSLS+L+ +FV L WV++NFLRP KNL+KYGSW LVTG
Sbjct: 1   MEACFFDTLKAQPFWVIFLFTLGSLSLLKFSFVFLKWVWINFLRPGKNLKKYGSWGLVTG 60

Query: 61  PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEG 120
           PTDGIGK FAFQLA+ GLNLVLVGRNPDKLKDVSDSI AKYAK QI++VVVDF+GDLDEG
Sbjct: 61  PTDGIGKGFAFQLARKGLNLVLVGRNPDKLKDVSDSILAKYAKIQIRTVVVDFTGDLDEG 120

Query: 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGM 180
           V++IKE IEGLDVGVLINNVGISYPYAR+FHEVD+ LL NLIKVNVEGTTKVTQAVLPGM
Sbjct: 121 VKKIKETIEGLDVGVLINNVGISYPYARYFHEVDEELLVNLIKVNVEGTTKVTQAVLPGM 180

Query: 181 LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQV 237
           +KRKKGAIVNIGSGAAIVIPSDPLY+VYAATKAYIDQFSR LYVEY+ SGIDVQCQV
Sbjct: 181 VKRKKGAIVNIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKNSGIDVQCQV 237

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224107711|ref|XP_002314573.1| predicted protein [Populus trichocarpa] gi|222863613|gb|EEF00744.1| predicted protein [Populus trichocarpa]

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 195/237 (82%), Positives = 218/237 (91%)

Query: 1   MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTG 60
           M  CF++ LK+QP WLL LFT+GSLS L+  F  L WVYV+FLRPAKNL+KYGSWALVTG
Sbjct: 1   MSLCFVDELKSQPSWLLVLFTLGSLSFLKFLFASLKWVYVSFLRPAKNLKKYGSWALVTG 60

Query: 61  PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEG 120
           PTDGIGK FAFQLA+ GLNL+LVGRNPDKLKDVS SIQ+KY+  QIK+VVVDFSGD+DEG
Sbjct: 61  PTDGIGKGFAFQLARKGLNLILVGRNPDKLKDVSTSIQSKYSNVQIKNVVVDFSGDIDEG 120

Query: 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGM 180
           V++IKE +EGLDVG+LINNVG+SYPYARFFHEVD+ LLK+LI+VNVEGTTKVTQAVLPGM
Sbjct: 121 VQKIKETVEGLDVGILINNVGVSYPYARFFHEVDEELLKHLIRVNVEGTTKVTQAVLPGM 180

Query: 181 LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQV 237
           LKRKKGAIVNIGSGAAIVIPSDPLY+VYAATKAYIDQFSR LYVEY+KSGIDVQCQV
Sbjct: 181 LKRKKGAIVNIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQV 237

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255547948|ref|XP_002515031.1| steroid dehydrogenase, putative [Ricinus communis] gi|223546082|gb|EEF47585.1| steroid dehydrogenase, putative [Ricinus communis]

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 201/237 (84%), Positives = 220/237 (92%)

Query: 1   MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTG 60
           ME CF++ LK+QPLW L LF++GSLS+LR  F ILNWVYVNFLRPAKNL+KYGSWALVTG
Sbjct: 1   MELCFVDKLKSQPLWFLVLFSLGSLSLLRCFFTILNWVYVNFLRPAKNLKKYGSWALVTG 60

Query: 61  PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEG 120
           PTDGIGK FAFQLA+ GLNLVLV RNPDKLKDVSDSI +KY K QIK+VVVDFSGD+DEG
Sbjct: 61  PTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSILSKYGKVQIKTVVVDFSGDIDEG 120

Query: 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGM 180
           V+RIK+ +EGLDVGVLINNVG+SYPYARFFHEVD+ LLKNLIKVNVEGTTKVT AVLPGM
Sbjct: 121 VKRIKDTVEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTHAVLPGM 180

Query: 181 LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQV 237
           LKRKKGAI+NIGSGAAIVIPSDPLY+VYAATKAYIDQFSR LYVEY+KSGIDVQCQV
Sbjct: 181 LKRKKGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQV 237

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357463161|ref|XP_003601862.1| Short-chain dehydrogenase/reductase [Medicago truncatula] gi|355490910|gb|AES72113.1| Short-chain dehydrogenase/reductase [Medicago truncatula]

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 190/237 (80%), Positives = 215/237 (90%)

Query: 1   MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTG 60
           M+ C ++ LKTQP W L LF++G  ++LR   ++LNW YVNFLR  KNL+ YGSWALVTG
Sbjct: 1   MDCCIISKLKTQPFWFLILFSLGLFTILRFTLLLLNWFYVNFLRQPKNLKNYGSWALVTG 60

Query: 61  PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEG 120
           PTDGIGKSFAF+LA+ GLNL+LVGRNP+KLKDVSDSI+AK+ KT++K+VVVDF+GDLD+G
Sbjct: 61  PTDGIGKSFAFELARKGLNLILVGRNPEKLKDVSDSIKAKFGKTEVKTVVVDFTGDLDDG 120

Query: 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGM 180
           V+RI E I+GLDVGVLINNVGISYPYARFFHEVDQ LLKNLIKVNV GTTKVTQAVLPGM
Sbjct: 121 VKRIVETIDGLDVGVLINNVGISYPYARFFHEVDQELLKNLIKVNVVGTTKVTQAVLPGM 180

Query: 181 LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQV 237
           LKRKKGAIVNIGSGAAIVIPSDPLY+VYAATKAYIDQFSR LYVEY+KSGIDVQCQV
Sbjct: 181 LKRKKGAIVNIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQV 237

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388519619|gb|AFK47871.1| unknown [Medicago truncatula]

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 190/237 (80%), Positives = 215/237 (90%)

Query: 1   MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTG 60
           M+ C ++ LKTQP W L LF++G  ++LR   ++LNW YVNFLR  KNL+ YGSWALVTG
Sbjct: 1   MDCCIISKLKTQPYWFLILFSLGLFTILRFTLLLLNWFYVNFLRQPKNLKNYGSWALVTG 60

Query: 61  PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEG 120
           PTDGIGKSFAF+LA+ GLNL+LVGRNP+KLKDVSDSI+AK+ KT++K+VVVDF+GDLD+G
Sbjct: 61  PTDGIGKSFAFELARKGLNLILVGRNPEKLKDVSDSIKAKFGKTEVKTVVVDFTGDLDDG 120

Query: 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGM 180
           V+RI E I+GLDVGVLINNVGISYPYARFFHEVDQ LLKNLIKVNV GTTKVTQAVLPGM
Sbjct: 121 VKRIVETIDGLDVGVLINNVGISYPYARFFHEVDQELLKNLIKVNVVGTTKVTQAVLPGM 180

Query: 181 LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQV 237
           LKRKKGAIVNIGSGAAIVIPSDPLY+VYAATKAYIDQFSR LYVEY+KSGIDVQCQV
Sbjct: 181 LKRKKGAIVNIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQV 237

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424552|ref|XP_002285316.1| PREDICTED: estradiol 17-beta-dehydrogenase 12 [Vitis vinifera]

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 194/237 (81%), Positives = 213/237 (89%)

Query: 1   MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTG 60
           ME CF+  L+TQPLW++ LF +G LSVL+    ILN VYV FLRP KNL+KYGSWALVT 
Sbjct: 1   MELCFMEKLQTQPLWVIVLFAVGCLSVLKSFLAILNGVYVCFLRPGKNLKKYGSWALVTA 60

Query: 61  PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEG 120
           PTDGIGK FAF+LA+ GLNLVLVGRNPDKLKDVSD+IQ+KY KTQIK+VVVDF+GD+ EG
Sbjct: 61  PTDGIGKGFAFELARKGLNLVLVGRNPDKLKDVSDAIQSKYGKTQIKAVVVDFAGDISEG 120

Query: 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGM 180
           V +I+EAI GLDVGVLINNVG+SYPYARFFHEVD  LLKNLIKVNVEGTTKVTQAVLPGM
Sbjct: 121 VLKIREAILGLDVGVLINNVGVSYPYARFFHEVDDELLKNLIKVNVEGTTKVTQAVLPGM 180

Query: 181 LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQV 237
           LKRKKGAIVNIGSGAAIVIPSDPLY+VYAATKAYIDQFSR LYVEY+ SGIDVQCQV
Sbjct: 181 LKRKKGAIVNIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKNSGIDVQCQV 237

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806497|ref|NP_001241510.1| uncharacterized protein LOC100817128 [Glycine max] gi|255647230|gb|ACU24083.1| unknown [Glycine max]

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 192/237 (81%), Positives = 217/237 (91%)

Query: 1   MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTG 60
           ME C +  LKTQPLW   LF +G L++L+LAFV+  WVYVNFLRP KNL+KYGSWA+VTG
Sbjct: 1   MECCIIARLKTQPLWFALLFVVGLLTILKLAFVVFRWVYVNFLRPPKNLKKYGSWAVVTG 60

Query: 61  PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEG 120
           PTDGIGKSFAF+LA+ GLNLVLVGRNPDKLKDVSDSI AK+ +T++K+VVVDFSGDLDEG
Sbjct: 61  PTDGIGKSFAFELARKGLNLVLVGRNPDKLKDVSDSIAAKFRRTEVKTVVVDFSGDLDEG 120

Query: 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGM 180
           V++I EAIEGL+VGVL+NNVG+SYPYARFFHEVD+ LL NLIKVNV GTTKVTQAVLPGM
Sbjct: 121 VKKISEAIEGLEVGVLVNNVGVSYPYARFFHEVDEGLLNNLIKVNVVGTTKVTQAVLPGM 180

Query: 181 LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQV 237
           L+RKKGAIVNIGSGAAIVIPSDPLY+VYAATKAYIDQFSR LYVEY+KSGIDVQCQ+
Sbjct: 181 LRRKKGAIVNIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQI 237

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449450411|ref|XP_004142956.1| PREDICTED: very-long-chain 3-oxoacyl-CoA reductase 1-like [Cucumis sativus] gi|449527051|ref|XP_004170526.1| PREDICTED: very-long-chain 3-oxoacyl-CoA reductase 1-like [Cucumis sativus]

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 191/237 (80%), Positives = 212/237 (89%)

Query: 1   MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTG 60
           M+   +  LK+QP+W+  L  +GSLS L+   +ILNW+YVNFLRP+KNL+KYGSWALVTG
Sbjct: 1   MQLSCVEHLKSQPIWVFFLLALGSLSALKFILIILNWIYVNFLRPSKNLKKYGSWALVTG 60

Query: 61  PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEG 120
           PTDGIGKSFAFQLA+ GLNLVLVGRNP+KLKDVSDSI AKY   QIKSVVVDFSGDL EG
Sbjct: 61  PTDGIGKSFAFQLARKGLNLVLVGRNPEKLKDVSDSIVAKYGSIQIKSVVVDFSGDLSEG 120

Query: 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGM 180
           ++RI EAIEGLDVGVLINNVG+SYPY RFFHEVD+ LL NLIKVNVEGTTKVT AVLPGM
Sbjct: 121 IKRITEAIEGLDVGVLINNVGVSYPYGRFFHEVDEELLNNLIKVNVEGTTKVTHAVLPGM 180

Query: 181 LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQV 237
           LKRK+GAIVNIGSGAAIVIPSDPLY+VYAATK+YIDQFSR LYVEY+KSGIDVQCQV
Sbjct: 181 LKRKRGAIVNIGSGAAIVIPSDPLYTVYAATKSYIDQFSRCLYVEYKKSGIDVQCQV 237

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356540201|ref|XP_003538578.1| PREDICTED: estradiol 17-beta-dehydrogenase 12-like [Glycine max]

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 189/237 (79%), Positives = 218/237 (91%)

Query: 1   MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTG 60
           ME C ++ LKTQP+W   LF +G L++L+LAFV+L WVYVNFLRP KNL+KYGSWA+VTG
Sbjct: 1   MECCIISRLKTQPIWFALLFIVGLLTILKLAFVVLRWVYVNFLRPPKNLKKYGSWAVVTG 60

Query: 61  PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEG 120
           PTDGIGKSFAF+LA+ GLNLVLVGRNPDKLKDVSDSI A++ KT++K+VVVDF GDLDEG
Sbjct: 61  PTDGIGKSFAFELARKGLNLVLVGRNPDKLKDVSDSIAARFGKTEVKTVVVDFFGDLDEG 120

Query: 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGM 180
           V++I EAI+GL+VGVL+NNVG+SYPYARFFHEVD+ LL NLIK+NV GTTKVTQAVLPGM
Sbjct: 121 VKKISEAIQGLEVGVLVNNVGVSYPYARFFHEVDEGLLNNLIKLNVVGTTKVTQAVLPGM 180

Query: 181 LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQV 237
           LKRKKGAIVN+GSGAAIVIPSDPLY+VYAATKAYIDQFSR LYVEY++SGIDVQCQV
Sbjct: 181 LKRKKGAIVNMGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKRSGIDVQCQV 237

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224100105|ref|XP_002311745.1| predicted protein [Populus trichocarpa] gi|222851565|gb|EEE89112.1| predicted protein [Populus trichocarpa]

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 193/233 (82%), Positives = 213/233 (91%)

Query: 5   FLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTGPTDG 64
           F++ LK QP WLL LFT+GSLS+L+     L WVYV+FLRPAKNL+KYGSWALVTGPTDG
Sbjct: 5   FIDQLKDQPFWLLLLFTLGSLSLLKFLSATLKWVYVSFLRPAKNLKKYGSWALVTGPTDG 64

Query: 65  IGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERI 124
           IGK FAFQLA+ GLNLVLVGRNPDKLKDVS SIQ++Y+  QIK+VVVDFSGD+DEGV++I
Sbjct: 65  IGKGFAFQLARKGLNLVLVGRNPDKLKDVSRSIQSRYSNVQIKNVVVDFSGDIDEGVQKI 124

Query: 125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK 184
           KE IEGLDVGVLINNVG+SYP ARFFHEVD+ LLKNLIKVNVEGTTKVTQAVL GMLK+K
Sbjct: 125 KETIEGLDVGVLINNVGVSYPCARFFHEVDEGLLKNLIKVNVEGTTKVTQAVLHGMLKKK 184

Query: 185 KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQV 237
           KGAIVNIGSGAAIVIPSDPLY+VYAATKAYIDQFSR LYVEY+KSGIDVQCQV
Sbjct: 185 KGAIVNIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQV 237

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	255
TAIR|locus:2008630	318	KCR1 "beta-ketoacyl reductase	0.921	0.738	0.708	1.3e-91
TAIR|locus:2023996	312	KCR2 "beta-ketoacyl reductase	0.886	0.724	0.545	3e-62
RGD|708367	312	Hsd17b12 "hydroxysteroid (17-b	0.831	0.679	0.443	1.2e-42
UNIPROTKB|Q6P7R8	312	Hsd17b12 "Estradiol 17-beta-de	0.831	0.679	0.443	1.2e-42
DICTYBASE|DDB_G0275049	307	DDB_G0275049 "short-chain dehy	0.858	0.713	0.414	2.5e-42
FB|FBgn0029975	321	CG1444 [Drosophila melanogaste	0.858	0.682	0.413	2.2e-41
MGI|MGI:1926967	312	Hsd17b12 "hydroxysteroid (17-b	0.729	0.596	0.455	2.2e-41
UNIPROTKB|Q53GQ0	312	HSD17B12 "Estradiol 17-beta-de	0.694	0.567	0.456	1.2e-40
UNIPROTKB|E2RJ79	312	HSD17B12 "Uncharacterized prot	0.694	0.567	0.483	1.6e-40
UNIPROTKB|A6H7H3	312	LOC789567 "LOC789567 protein"	0.909	0.743	0.418	2.6e-40

TAIR|locus:2008630 KCR1 "beta-ketoacyl reductase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 913 (326.5 bits), Expect = 1.3e-91, P = 1.3e-91
 Identities = 168/237 (70%), Positives = 206/237 (86%)

Query:     1 MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTG 60
             ME C     K+QP WLL LF +GS+S+ +  F +L   Y+ FLRP+KNLR+YGSWA++TG
Sbjct:     1 MEIC--TYFKSQPTWLLILFVLGSISIFKFIFTLLRSFYIYFLRPSKNLRRYGSWAIITG 58

Query:    61 PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEG 120
             PTDGIGK+FAFQLA+ GLNL+LV RNPDKLKDVSDSI++KY++TQI +VV+DFSGD+DEG
Sbjct:    59 PTDGIGKAFAFQLAQKGLNLILVARNPDKLKDVSDSIRSKYSQTQILTVVMDFSGDIDEG 118

Query:   121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGM 180
             V+RIKE+IEGLDVG+LINN G+SYPYA++FHEVD+ L+ NLIK+NVEGTTKVTQAVLP M
Sbjct:   119 VKRIKESIEGLDVGILINNAGMSYPYAKYFHEVDEELINNLIKINVEGTTKVTQAVLPNM 178

Query:   181 LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQV 237
             LKRKKGAI+N+GSGAA +IPS P YSVYA  K Y+DQF++ L+VEY+KSGIDVQCQV
Sbjct:   179 LKRKKGAIINMGSGAAALIPSYPFYSVYAGAKTYVDQFTKCLHVEYKKSGIDVQCQV 235

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0045703 "ketoreductase activity" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009790 "embryo development" evidence=IMP

GO:0018454 "acetoacetyl-CoA reductase activity" evidence=IMP

GO:0042761 "very long-chain fatty acid biosynthetic process" evidence=IMP

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0046520 "sphingoid biosynthetic process" evidence=RCA

GO:0042335 "cuticle development" evidence=ISS

TAIR|locus:2023996 KCR2 "beta-ketoacyl reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
 Identities = 125/229 (54%), Positives = 171/229 (74%)

Query:    10 KTQPLWLLALFTIGSLSVLRLAFV-ILNWVYVNFLRPAKNLRKYGSWALVTGPTDGIGKS 68
             ++QP +L  +  IG L +LR+ F+ +L W    FL   K L++YGSWA+VTG T+GIG++
Sbjct:     8 ESQPWYLHFVCFIGFLFLLRVLFIPLLKWFTTRFLLTPKRLKRYGSWAMVTGATEGIGRA 67

Query:    69 FAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI 128
             FA +LAK GLNL+LV RN  KL+ VSD  Q ++   +IK +  DFS +   G   I+E I
Sbjct:    68 FAHELAKHGLNLILVSRNLSKLESVSDDFQQEFPHIKIKIIPFDFSSE--GGYGAIEEGI 125

Query:   129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAI 188
             +GL+VG+LINNVGI+YP A FFHEVDQ+    +++VN+E TT VT++++  ML R++GAI
Sbjct:   126 KGLEVGILINNVGITYPRAMFFHEVDQLTWTKILRVNLEATTWVTRSLIGPMLHRRRGAI 185

Query:   189 VNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQV 237
             VNI SGAA+V+PS PLY++YAATKAY+D  SRSL+VEY++ GIDVQCQV
Sbjct:   186 VNISSGAAVVVPSHPLYAIYAATKAYVDALSRSLHVEYKQFGIDVQCQV 234

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0045703 "ketoreductase activity" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0018454 "acetoacetyl-CoA reductase activity" evidence=IMP

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0046520 "sphingoid biosynthetic process" evidence=RCA

RGD|708367 Hsd17b12 "hydroxysteroid (17-beta) dehydrogenase 12" [Rattus norvegicus (taxid:10116)]

 Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
 Identities = 102/230 (44%), Positives = 153/230 (66%)

Query:    17 LALFTI-GSLSVLRLAFVILNWVYVN--FLRPAKNLRKYGSWALVTGPTDGIGKSFAFQL 73
             +A  T+  S S+ R AF +  W   N  F+ P     + G WA+VTG TDGIGKS+A +L
Sbjct:    19 IAYLTLRASYSLFR-AFQV--WCVGNQAFVGP-----RLGEWAVVTGGTDGIGKSYAEEL 70

Query:    74 AKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133
             AK G+ +VL+ R+ DKLK+VS++I+ K+   + +++ VDFS  LD+  ++IK  + GL++
Sbjct:    71 AKRGMKIVLISRSQDKLKEVSNNIKEKF-NVETRTIAVDFS--LDDIYDKIKTGLSGLEI 127

Query:   134 GVLINNVGISYPYARFFHEVDQV--LLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNI 191
             GVL+NNVG+SY Y  +F E+  +   +K LI +NV    KVT+ VLPGM++R KG I+NI
Sbjct:   128 GVLVNNVGMSYEYPEYFLEIPDLDNTIKKLININVLSICKVTRLVLPGMVERSKGVILNI 187

Query:   192 GSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLL 241
              S + + +P  PL +VY+ATKA++D FS+ L+ EY+  GI VQ  + F +
Sbjct:   188 SSASGM-LPV-PLLTVYSATKAFVDFFSQCLHEEYKSKGIFVQSVLPFFV 235

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001968 "fibronectin binding" evidence=IEA;ISO

GO:0003674 "molecular_function" evidence=ND

GO:0004303 "estradiol 17-beta-dehydrogenase activity" evidence=IEA

GO:0005518 "collagen binding" evidence=IEA;ISO

GO:0005575 "cellular_component" evidence=ND

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0006703 "estrogen biosynthetic process" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0008201 "heparin binding" evidence=IEA;ISO

GO:0010811 "positive regulation of cell-substrate adhesion" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0030198 "extracellular matrix organization" evidence=IEA;ISO

GO:0031012 "extracellular matrix" evidence=IEA;ISO

UNIPROTKB|Q6P7R8 Hsd17b12 "Estradiol 17-beta-dehydrogenase 12" [Rattus norvegicus (taxid:10116)]

 Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
 Identities = 102/230 (44%), Positives = 153/230 (66%)

Query:    17 LALFTI-GSLSVLRLAFVILNWVYVN--FLRPAKNLRKYGSWALVTGPTDGIGKSFAFQL 73
             +A  T+  S S+ R AF +  W   N  F+ P     + G WA+VTG TDGIGKS+A +L
Sbjct:    19 IAYLTLRASYSLFR-AFQV--WCVGNQAFVGP-----RLGEWAVVTGGTDGIGKSYAEEL 70

Query:    74 AKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV 133
             AK G+ +VL+ R+ DKLK+VS++I+ K+   + +++ VDFS  LD+  ++IK  + GL++
Sbjct:    71 AKRGMKIVLISRSQDKLKEVSNNIKEKF-NVETRTIAVDFS--LDDIYDKIKTGLSGLEI 127

Query:   134 GVLINNVGISYPYARFFHEVDQV--LLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNI 191
             GVL+NNVG+SY Y  +F E+  +   +K LI +NV    KVT+ VLPGM++R KG I+NI
Sbjct:   128 GVLVNNVGMSYEYPEYFLEIPDLDNTIKKLININVLSICKVTRLVLPGMVERSKGVILNI 187

Query:   192 GSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLL 241
              S + + +P  PL +VY+ATKA++D FS+ L+ EY+  GI VQ  + F +
Sbjct:   188 SSASGM-LPV-PLLTVYSATKAFVDFFSQCLHEEYKSKGIFVQSVLPFFV 235

GO:0000166 "nucleotide binding" evidence=IEA

DICTYBASE|DDB_G0275049 DDB_G0275049 "short-chain dehydrogenase/reductase (SDR) family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
 Identities = 92/222 (41%), Positives = 144/222 (64%)

Query:    21 TIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNL 80
             +IG   +LR A   + ++Y  F+R   N+ KYGSW +VTG TDGIGK++  + AK  LN+
Sbjct:    13 SIGLGILLRYAARFVLFLYAYFVRSPININKYGSWVVVTGATDGIGKAYCHEFAKKKLNV 72

Query:    81 VLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNV 140
             VLV R+ DKLK+V+  I+ K+ K Q K +  DF+   D   + + + + G+D+GVL+NNV
Sbjct:    73 VLVSRSLDKLKEVASEIENKF-KVQTKVISFDFNTTDDSKYQELFKQLSGIDIGVLVNNV 131

Query:   141 GISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP 200
             GISY +  +  E+    +++LI +NV   T +++ +L  M+++K+GAI+N+ S + I  P
Sbjct:   132 GISYDHPMYLEELQPASIESLINLNVRAATVLSKFILTSMVEKKRGAIINLASVSGIT-P 190

Query:   201 SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLC 242
               PL +VY+ TKAYI++FS +L +EY   GI VQC    ++C
Sbjct:   191 I-PLLTVYSGTKAYIEKFSLALNLEYASKGIFVQCVTPGIVC 231

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

FB|FBgn0029975 CG1444 [Drosophila melanogaster (taxid:7227)]

 Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
 Identities = 96/232 (41%), Positives = 149/232 (64%)

Query:    11 TQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRP-----AKNLRKYGSWALVTGPTDGI 65
             +Q L LL    IG +   ++   +L W+Y N + P     + +L K G WA+VTG TDGI
Sbjct:     6 SQVLSLLGGLAIGIVG-FQVFRKVLPWIYANVVGPKVFGSSVDLSKMGEWAVVTGSTDGI 64

Query:    66 GKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIK 125
             GK++A +LA+ GL LVL+ R+ +KL  V+  I  KY   +++ + VDF+G  DE  ++I+
Sbjct:    65 GKAYAKELARRGLKLVLISRSLEKLNVVAKEIGDKYG-VEVRVIDVDFTGG-DEIYDKIR 122

Query:   126 EAIEGLDVGVLINNVGISYPYARFF---HEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK 182
             E   GL+VGVL+NNVGISY +  +F   ++ D   L+N++  N+   T +T   LPGM+ 
Sbjct:   123 EKTTGLNVGVLVNNVGISYGHPEYFLDCYKADPPFLRNIVAANIHSVTHMTALFLPGMIS 182

Query:   183 RKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQ 234
             +++G I+N+ S A  VIP+ PL SVY++TKA++++FS  L  EY++ GI +Q
Sbjct:   183 QRRGVIINVSSTAG-VIPN-PLLSVYSSTKAFVNKFSDDLQTEYKEHGILIQ 232

GO:0016229 "steroid dehydrogenase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

MGI|MGI:1926967 Hsd17b12 "hydroxysteroid (17-beta) dehydrogenase 12" [Mus musculus (taxid:10090)]

 Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
 Identities = 88/193 (45%), Positives = 136/193 (70%)

Query:    51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVV 110
             + G WA+VTG TDGIGK++A +LAK G+ +VL+ R+ DKL  VS++I+ K+   + +++ 
Sbjct:    48 RLGEWAVVTGGTDGIGKAYAEELAKRGMKIVLISRSQDKLNQVSNNIKEKF-NVETRTIA 106

Query:   111 VDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQV--LLKNLIKVNVEG 168
             VDFS  LD+  ++IK  + GL++GVL+NNVG+SY Y  +F E+  +   +K LI +NV  
Sbjct:   107 VDFS--LDDIYDKIKTGLSGLEIGVLVNNVGMSYEYPEYFLEIPDLDNTIKKLININVLS 164

Query:   169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
               KVT+ VLPGM++R KG I+NI S + + +P  PL ++Y+ATKA++D FS+ L+ EY+ 
Sbjct:   165 VCKVTRLVLPGMVERSKGVILNISSASGM-LPV-PLLTIYSATKAFVDFFSQCLHEEYKS 222

Query:   229 SGIDVQCQVLFLL 241
              GI VQ  + +L+
Sbjct:   223 KGIFVQSVMPYLV 235

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001968 "fibronectin binding" evidence=IDA

GO:0004303 "estradiol 17-beta-dehydrogenase activity" evidence=IEA

GO:0005518 "collagen binding" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0008201 "heparin binding" evidence=IDA

GO:0010811 "positive regulation of cell-substrate adhesion" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0030198 "extracellular matrix organization" evidence=IDA

GO:0031012 "extracellular matrix" evidence=IDA

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|Q53GQ0 HSD17B12 "Estradiol 17-beta-dehydrogenase 12" [Homo sapiens (taxid:9606)]

 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 84/184 (45%), Positives = 131/184 (71%)

Query:    53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
             G WA+VTG TDGIGKS+A +LAK G+ +VL+ R+ DKL  VS  I+ K+ K + +++ VD
Sbjct:    50 GEWAVVTGSTDGIGKSYAEELAKHGMKVVLISRSKDKLDQVSSEIKEKF-KVETRTIAVD 108

Query:   113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQV--LLKNLIKVNVEGTT 170
             F+ +  +  ++IK  + GL++G+L+NNVG+SY Y  +F +V  +  ++K +I +N+    
Sbjct:   109 FASE--DIYDKIKTGLAGLEIGILVNNVGMSYEYPEYFLDVPDLDNVIKKMININILSVC 166

Query:   171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
             K+TQ VLPGM++R KGAI+NI SG+ + +P  PL ++Y+ATK ++D FS+ L+ EYR  G
Sbjct:   167 KMTQLVLPGMVERSKGAILNISSGSGM-LPV-PLLTIYSATKTFVDFFSQCLHEEYRSKG 224

Query:   231 IDVQ 234
             + VQ
Sbjct:   225 VFVQ 228

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0004303 "estradiol 17-beta-dehydrogenase activity" evidence=IEA

GO:0001968 "fibronectin binding" evidence=IEA

GO:0005518 "collagen binding" evidence=IEA

GO:0008201 "heparin binding" evidence=IEA

GO:0010811 "positive regulation of cell-substrate adhesion" evidence=IEA

GO:0030198 "extracellular matrix organization" evidence=IEA

GO:0031012 "extracellular matrix" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0006703 "estrogen biosynthetic process" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005789 "endoplasmic reticulum membrane" evidence=TAS

GO:0019432 "triglyceride biosynthetic process" evidence=TAS

GO:0035338 "long-chain fatty-acyl-CoA biosynthetic process" evidence=TAS

GO:0044255 "cellular lipid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

UNIPROTKB|E2RJ79 HSD17B12 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
 Identities = 89/184 (48%), Positives = 129/184 (70%)

Query:    53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
             G WA+VTG TDGIGKS+A +LAK G+ +VL+ R+ DKL  VS  I+ K+ K + ++V VD
Sbjct:    50 GEWAVVTGSTDGIGKSYAEELAKHGMKVVLISRSQDKLNQVSSEIREKF-KVETRTVAVD 108

Query:   113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQV--LLKNLIKVNVEGTT 170
             F+ +  +  ++IK ++ GL +GVL+NNVG+SY Y  +F +V  +   +K LI +NV    
Sbjct:   109 FASE--DIYDKIKTSLAGLKIGVLVNNVGMSYEYPEYFLDVPDLDNTIKKLININVLSVC 166

Query:   171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
             K+T+ VLPGM++R KGAI+NI S + +  P  PL ++Y+ATKA++D FSR L+ EYR  G
Sbjct:   167 KMTRLVLPGMVERSKGAILNISSASGMA-PV-PLLAIYSATKAFVDFFSRCLHEEYRSKG 224

Query:   231 IDVQ 234
             I VQ
Sbjct:   225 IFVQ 228

GO:0031012 "extracellular matrix" evidence=IEA

GO:0030198 "extracellular matrix organization" evidence=IEA

GO:0010811 "positive regulation of cell-substrate adhesion" evidence=IEA

GO:0008201 "heparin binding" evidence=IEA

GO:0005518 "collagen binding" evidence=IEA

GO:0001968 "fibronectin binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|A6H7H3 LOC789567 "LOC789567 protein" [Bos taurus (taxid:9913)]

 Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
 Identities = 102/244 (41%), Positives = 155/244 (63%)

Query:     1 MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLR-KYGSWALVT 59
             MES FL    T  L+ + + T+  L+ LR++  +   V V  L     +  + G WA+VT
Sbjct:     1 MES-FLPA--TGFLYWVGVGTVAYLA-LRISCFLFTAVRVWGLGNESGVGPRLGEWAVVT 56

Query:    60 GPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDE 119
             G TDGIGKS+A +LA+ G+ +VL+ R+ DKL  VS  I+ K+ K + K++ VDF+  L++
Sbjct:    57 GSTDGIGKSYAEKLAERGMKIVLISRSQDKLNQVSSEIREKF-KVETKTIAVDFT--LED 113

Query:   120 GVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQV--LLKNLIKVNVEGTTKVTQAVL 177
               ++IK ++ GL++GVL+NNVG+SY Y  +F ++  +   +K LI VNV    K+TQ VL
Sbjct:   114 IYDKIKTSLAGLEIGVLVNNVGMSYEYPEYFLDIPDLDNTIKKLISVNVLSVCKMTQLVL 173

Query:   178 PGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQV 237
             PGM++R KG I+NI S      P  PL ++Y+ATKA++D FS+ L+ EY+  GI VQ  +
Sbjct:   174 PGMVERSKGVILNISSATGRY-PV-PLLTIYSATKAFVDFFSQCLHEEYKSKGIFVQSVL 231

Query:   238 LFLL 241
              F +
Sbjct:   232 PFFV 235

GO:0031012 "extracellular matrix" evidence=IEA

GO:0030198 "extracellular matrix organization" evidence=IEA

GO:0010811 "positive regulation of cell-substrate adhesion" evidence=IEA

GO:0008201 "heparin binding" evidence=IEA

GO:0005518 "collagen binding" evidence=IEA

GO:0001968 "fibronectin binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8L9C4	KCR1_ARATH	1, ., 1, ., 1, ., 3, 3, 0	0.7088	0.9215	0.7389	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	255
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	1e-165
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	8e-87
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	1e-45
cd05233	234	cd05233, SDR_c, classical (c) SDRs	2e-38
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-34
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	6e-32
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	2e-31
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	1e-30
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	4e-30
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	4e-29
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	2e-28
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	3e-28
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	6e-27
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	1e-26
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-26
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	4e-26
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	5e-26
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	1e-25
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	6e-25
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-25
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	1e-24
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	1e-24
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	2e-24
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-24
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	3e-24
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	8e-24
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	1e-23
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	1e-23
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-23
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-23
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	8e-23
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	1e-22
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	1e-22
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	7e-22
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	1e-21
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	7e-21
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	9e-21
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	2e-20
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	5e-20
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	6e-20
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	1e-19
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	1e-19
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	1e-19
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	1e-19
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	2e-19
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	3e-19
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	6e-19
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	7e-19
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	9e-19
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	1e-18
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	2e-18
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	3e-18
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	3e-18
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	4e-18
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	4e-18
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	6e-18
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	8e-18
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	8e-18
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	8e-18
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	8e-18
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	1e-17
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	1e-17
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	1e-17
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	2e-17
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	3e-17
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	4e-17
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	4e-17
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	6e-17
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	7e-17
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	8e-17
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	1e-16
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	1e-16
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	2e-16
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	2e-16
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	3e-16
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	3e-16
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	3e-16
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	4e-16
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	4e-16
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	6e-16
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	6e-16
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	7e-16
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	7e-16
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	8e-16
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	8e-16
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	9e-16
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	1e-15
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	1e-15
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	1e-15
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	2e-15
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	2e-15
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	3e-15
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	4e-15
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	4e-15
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	4e-15
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	5e-15
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	5e-15
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	6e-15
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	6e-15
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	7e-15
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	7e-15
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	7e-15
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	7e-15
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-14
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	2e-14
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	2e-14
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	3e-14
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	3e-14
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	3e-14
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	4e-14
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	6e-14
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	7e-14
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	7e-14
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	7e-14
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	1e-13
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	1e-13
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	1e-13
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	1e-13
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	2e-13
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	2e-13
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	3e-13
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	3e-13
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	4e-13
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	5e-13
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	6e-13
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	7e-13
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	8e-13
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	8e-13
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	9e-13
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	2e-12
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	2e-12
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-12
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	2e-12
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	5e-12
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	6e-12
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	7e-12
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	8e-12
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	8e-12
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	9e-12
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	1e-11
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	1e-11
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	1e-11
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	1e-11
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	2e-11
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	2e-11
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	3e-11
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	4e-11
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	4e-11
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	5e-11
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	7e-11
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	8e-11
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	9e-11
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	9e-11
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	1e-10
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	1e-10
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	2e-10
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	2e-10
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	4e-10
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-10
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-10
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-10
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	9e-10
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	1e-09
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	1e-09
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	2e-09
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	2e-09
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	2e-09
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	3e-09
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	3e-09
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	4e-09
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	5e-09
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	8e-09
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	9e-09
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	1e-08
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	2e-08
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	2e-08
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	2e-08
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	2e-08
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	2e-08
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	3e-08
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	3e-08
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	3e-08
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	4e-08
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	5e-08
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	6e-08
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	6e-08
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	8e-08
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	1e-07
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	1e-07
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	1e-07
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	2e-07
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	2e-07
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	2e-07
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	3e-07
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	4e-07
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	4e-07
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	6e-07
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	7e-07
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	1e-06
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	3e-06
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	5e-06
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	6e-06
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	6e-06
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	7e-06
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	9e-06
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	1e-05
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	1e-05
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	1e-05
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	2e-05
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	2e-05
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	2e-05
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	2e-05
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	3e-05
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	4e-05
cd01078	194	cd01078, NAD_bind_H4MPT_DH, NADP binding domain of	6e-05
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	7e-05
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	1e-04
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	2e-04
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	2e-04
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	3e-04
PRK08655	437	PRK08655, PRK08655, prephenate dehydrogenase; Prov	3e-04
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	3e-04
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	4e-04
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	5e-04
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	0.001
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	0.001
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.002
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	0.002
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	0.003
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	0.004
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.004
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	0.004

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score =  459 bits (1183), Expect = e-165
 Identities = 205/237 (86%), Positives = 223/237 (94%)

Query: 1   MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTG 60
           ME CF++ LK+QPLWLL LF +GSLS+L+  F ILNWVYV FLRPAKNL+KYGSWALVTG
Sbjct: 1   MELCFVDKLKSQPLWLLVLFVLGSLSILKFFFTILNWVYVYFLRPAKNLKKYGSWALVTG 60

Query: 61  PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEG 120
           PTDGIGK FAFQLA+ GLNLVLV RNPDKLKDVSDSIQ+KY+KTQIK+VVVDFSGD+DEG
Sbjct: 61  PTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEG 120

Query: 121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGM 180
           V+RIKE IEGLDVGVLINNVG+SYPYARFFHEVD+ LLKNLIKVNVEGTTKVTQAVLPGM
Sbjct: 121 VKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGM 180

Query: 181 LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQV 237
           LKRKKGAI+NIGSGAAIVIPSDPLY+VYAATKAYIDQFSR LYVEY+KSGIDVQCQV
Sbjct: 181 LKRKKGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQV 237

Length = 320

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score =  257 bits (659), Expect = 8e-87
 Identities = 94/188 (50%), Positives = 136/188 (72%), Gaps = 4/188 (2%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G+WA+VTG TDGIGK++A +LAK G N++L+ R  +KL  V+  I+ KY   + K++  D
Sbjct: 1   GTWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKY-GVETKTIAAD 59

Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
           FS   D+  ERI++ +EGLD+G+L+NNVGIS+    +F E  +  L+++I VNV  T K+
Sbjct: 60  FS-AGDDIYERIEKELEGLDIGILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLKM 118

Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
           T+ +LPGM+KRKKGAIVNI S A  +IP+ PL + Y+A+KA++D FSR+LY EY+  GID
Sbjct: 119 TRLILPGMVKRKKGAIVNISSFAG-LIPT-PLLATYSASKAFLDFFSRALYEEYKSQGID 176

Query: 233 VQCQVLFL 240
           VQ  + +L
Sbjct: 177 VQSLLPYL 184

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  153 bits (389), Expect = 1e-45
 Identities = 66/187 (35%), Positives = 109/187 (58%), Gaps = 9/187 (4%)

Query: 51  KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVV 110
             G  AL+TG + GIG   A QLA+ G NL+LV R  DKL+ ++  ++ K    +++ + 
Sbjct: 4   MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT-GVEVEVIP 62

Query: 111 VDFSGDLDEGVERIKEAIE--GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
            D S    E +ER+++ ++  G  + VL+NN G        F E+     + +I++N+  
Sbjct: 63  ADLSD--PEALERLEDELKERGGPIDVLVNNAGFGTFGP--FLELSLDEEEEMIQLNILA 118

Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
            T++T+AVLPGM++R  G I+NIGS A ++    P  +VY+ATKA++  FS +L  E + 
Sbjct: 119 LTRLTKAVLPGMVERGAGHIINIGSAAGLI--PTPYMAVYSATKAFVLSFSEALREELKG 176

Query: 229 SGIDVQC 235
           +G+ V  
Sbjct: 177 TGVKVTA 183

Length = 265

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  133 bits (337), Expect = 2e-38
 Identities = 62/182 (34%), Positives = 93/182 (51%), Gaps = 11/182 (6%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           ALVTG + GIG++ A +LA+ G  +VL  RN + L +++     +       +V  D S 
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAA---IEALGGNAVAVQADVSD 57

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
             D++  VE   E    LD+  L+NN GI+ P      E+       ++ VN+ G   +T
Sbjct: 58  EEDVEALVEEALEEFGRLDI--LVNNAGIARP--GPLEELTDEDWDRVLDVNLTGVFLLT 113

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           +A LP M K+  G IVNI S A +     P  + YAA+KA ++  +RSL +E    GI V
Sbjct: 114 RAALPHMKKQGGGRIVNISSVAGLRPL--PGQAAYAASKAALEGLTRSLALELAPYGIRV 171

Query: 234 QC 235
             
Sbjct: 172 NA 173

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  122 bits (309), Expect = 3e-34
 Identities = 64/183 (34%), Positives = 101/183 (55%), Gaps = 10/183 (5%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  AL+TG   GIG++ A  LAK G+N+ L+ R  + LK V++ ++A   K  I +  V 
Sbjct: 7   GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVS 66

Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARF--FHEVDQVLLKNLIKVNVEGTT 170
              ++   +E++K  +  +D  +LINN GI    ++F  F E+D    + +I+VN+ G  
Sbjct: 67  DYEEVTAAIEQLKNELGSID--ILINNAGI----SKFGKFLELDPAEWEKIIQVNLMGVY 120

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
             T+AVLP M++R+ G I+NI S A        + S Y+A+K  +   + SL  E RK  
Sbjct: 121 YATRAVLPSMIERQSGDIINISSTAG--QKGAAVTSAYSASKFGVLGLTESLMQEVRKHN 178

Query: 231 IDV 233
           I V
Sbjct: 179 IRV 181

Length = 239

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  117 bits (295), Expect = 6e-32
 Identities = 58/181 (32%), Positives = 88/181 (48%), Gaps = 10/181 (5%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           AL+TG + GIG++ A  LA+ G  +VL  R  ++L+     +  +       ++ +D + 
Sbjct: 9   ALITGASSGIGEATARALAEAGAKVVLAARREERLEA----LADEIGAGAALALALDVT- 63

Query: 116 DLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
           D       I+   E    + +L+NN G+         E D      +I  NV+G    T+
Sbjct: 64  DRAAVEAAIEALPEEFGRIDILVNNAGL-ALGDPL-DEADLDDWDRMIDTNVKGLLNGTR 121

Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQ 234
           AVLPGM++RK G I+N+GS A       P  +VY ATKA +  FS  L  E   +GI V 
Sbjct: 122 AVLPGMVERKSGHIINLGSIAGRY--PYPGGAVYGATKAAVRAFSLGLRQELAGTGIRVT 179

Query: 235 C 235
            
Sbjct: 180 V 180

Length = 246

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  115 bits (291), Expect = 2e-31
 Identities = 60/183 (32%), Positives = 88/183 (48%), Gaps = 15/183 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            L+TG + GIG + A  LA  G  ++   RNPDKL+        +     ++ + +D + 
Sbjct: 3   VLITGCSSGIGLALALALAAQGYRVIATARNPDKLES-----LGELLNDNLEVLELDVT- 56

Query: 116 DLDEGVERIKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
           D +     +KE IE    +DV  L+NN G          E     ++ L +VNV G  +V
Sbjct: 57  DEESIKAAVKEVIERFGRIDV--LVNNAGYGLFGP--LEETSIEEVRELFEVNVFGPLRV 112

Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
           T+A LP M K+  G IVN+ S A +V    P    Y A+KA ++  S SL +E    GI 
Sbjct: 113 TRAFLPLMRKQGSGRIVNVSSVAGLV--PTPFLGPYCASKAALEALSESLRLELAPFGIK 170

Query: 233 VQC 235
           V  
Sbjct: 171 VTI 173

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score =  113 bits (285), Expect = 1e-30
 Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 14/189 (7%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G   L+TG + GIGK+ A +L K G N+++V R+  KL++  + I+A+   +     V  
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANAS--GQKVSY 58

Query: 113 FSGDLD--EGVER-IKEAIE-GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
            S DL   E VE+   +A+E G    +++N  GIS P    F ++     +  + VN  G
Sbjct: 59  ISADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIP--GLFEDLTAEEFERGMDVNYFG 116

Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL--YSVYAATKAYIDQFSRSLYVEY 226
           +  V  AVLP M +++ G IV + S AA+V     +  YS Y  +K  +   + SL  E 
Sbjct: 117 SLNVAHAVLPLMKEQRPGHIVFVSSQAALV----GIYGYSAYCPSKFALRGLAESLRQEL 172

Query: 227 RKSGIDVQC 235
           +   I V  
Sbjct: 173 KPYNIRVSV 181

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score =  112 bits (283), Expect = 4e-30
 Identities = 58/180 (32%), Positives = 97/180 (53%), Gaps = 11/180 (6%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           ++TG + GIG+  A+ LA+ G  LVL  R  ++L++V      +        V +D S D
Sbjct: 7   IITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSEC-LELGAPSPHVVPLDMS-D 64

Query: 117 LDEGVERIKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
           L++  + ++EA++   GLD  +LINN GIS      FH+    + + +++VN  G   +T
Sbjct: 65  LEDAEQVVEEALKLFGGLD--ILINNAGISMR--SLFHDTSIDVDRKIMEVNYFGPVALT 120

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           +A LP +++R +G+IV + S A  +    P  + YAA+K  +  F  SL  E  +  I V
Sbjct: 121 KAALPHLIERSQGSIVVVSSIAGKI--GVPFRTAYAASKHALQGFFDSLRAELSEPNISV 178

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score =  109 bits (275), Expect = 4e-29
 Identities = 58/186 (31%), Positives = 92/186 (49%), Gaps = 22/186 (11%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           AL+TG + GIGK+ A   AK G +L LV R+ D L+ ++  +++   K    +  +D S 
Sbjct: 9   ALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVK--AAAYSIDLS- 65

Query: 116 DLDEGVERIKEAIE-GLDVGVLINNVGISY-------PYARFFHEVDQVLLKNLIKVNVE 167
           + +     I E +E      VLINN G++Y       P + +         + +I++N+ 
Sbjct: 66  NPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDW---------QWVIQLNLT 116

Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
              +   AVLPGM  R  G I+N+ S AA    + P +  Y  +KA +  F++ L  E R
Sbjct: 117 SVFQCCSAVLPGMRARGGGLIINVSSIAA--RNAFPQWGAYCVSKAALAAFTKCLAEEER 174

Query: 228 KSGIDV 233
             GI V
Sbjct: 175 SHGIRV 180

Length = 241

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score =  108 bits (271), Expect = 2e-28
 Identities = 63/186 (33%), Positives = 102/186 (54%), Gaps = 20/186 (10%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            L+TG + GIG++ A + AK G  L+L GR  ++L++++D + AK+   ++  + +D S 
Sbjct: 3   VLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKF-PVKVLPLQLDVS- 60

Query: 116 DLDEGVERIKEAIEGL-----DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
             D   E I+ A+E L     D+ +L+NN G++        E D    + +I  NV+G  
Sbjct: 61  --DR--ESIEAALENLPEEFRDIDILVNNAGLALGLDPA-QEADLEDWETMIDTNVKGLL 115

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY---SVYAATKAYIDQFSRSLYVEYR 227
            VT+ +LP M+ R +G I+N+GS A         Y   +VY ATKA + QFS +L  +  
Sbjct: 116 NVTRLILPIMIARNQGHIINLGSIAGRYP-----YAGGNVYCATKAAVRQFSLNLRKDLI 170

Query: 228 KSGIDV 233
            +GI V
Sbjct: 171 GTGIRV 176

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score =  107 bits (268), Expect = 3e-28
 Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 22/188 (11%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G+  L+TG T GIG + A +  + G  +++ GR  ++L       +AK     I ++V+D
Sbjct: 5   GNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLA------EAKKELPNIHTIVLD 58

Query: 113 FSGDLDEGVERIKEAI--EGLDVGVLINNVGISYPY-----ARFFHEVDQVLLKNLIKVN 165
             GD  E VE + EA+  E  ++ +LINN GI  P      A    + D       I  N
Sbjct: 59  -VGDA-ESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKADTE-----IDTN 111

Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
           + G  ++ +A LP + K+ +  IVN+ SG A V P      VY ATKA +  ++ +L  +
Sbjct: 112 LIGPIRLIKAFLPHLKKQPEATIVNVSSGLAFV-PM-AANPVYCATKAALHSYTLALRHQ 169

Query: 226 YRKSGIDV 233
            + +G++V
Sbjct: 170 LKDTGVEV 177

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  104 bits (260), Expect = 6e-27
 Identities = 59/185 (31%), Positives = 93/185 (50%), Gaps = 14/185 (7%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN--PDKLKDVSDSIQAKYAKTQIKSVVVDF 113
           ALVTG + GIG++ A  LA+ G  +V+  R    +  + ++ +I+      +  +V  D 
Sbjct: 8   ALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEA-GGGRAAAVAADV 66

Query: 114 SGDLDE---GVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
           S D +     V   +E    +D  +L+NN GI+ P A    E+ +     +I VN+ G  
Sbjct: 67  SDDEESVEALVAAAEEEFGRID--ILVNNAGIAGPDAP-LEELTEEDWDRVIDVNLLGAF 123

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
            +T+A LP M   KK  IVNI S A +  P  P  + YAA+KA +   +++L +E    G
Sbjct: 124 LLTRAALPLM---KKQRIVNISSVAGLGGP--PGQAAYAASKAALIGLTKALALELAPRG 178

Query: 231 IDVQC 235
           I V  
Sbjct: 179 IRVNA 183

Length = 251

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  103 bits (258), Expect = 1e-26
 Identities = 58/189 (30%), Positives = 96/189 (50%), Gaps = 24/189 (12%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           ALVTG + GIG++ A +LA  G  + +  R+ +   +  + I  K       ++  D S 
Sbjct: 3   ALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEI--KALGGNAAALEADVSD 60

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
              ++  VE+++     +D+  L+NN GI+    R     D +L++        +I VN+
Sbjct: 61  REAVEALVEKVEAEFGPVDI--LVNNAGIT----R-----DNLLMRMSEEDWDAVINVNL 109

Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
            G   VTQAV+  M+KR+ G I+NI S   ++   +P  + YAA+KA +  F++SL  E 
Sbjct: 110 TGVFNVTQAVIRAMIKRRSGRIINISSVVGLI--GNPGQANYAASKAGVIGFTKSLAKEL 167

Query: 227 RKSGIDVQC 235
              GI V  
Sbjct: 168 ASRGITVNA 176

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  102 bits (256), Expect = 3e-26
 Identities = 58/189 (30%), Positives = 95/189 (50%), Gaps = 24/189 (12%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           ALVTG + GIG++ A +LA  G  +V+   N +  + ++  ++A   + ++  +V D S 
Sbjct: 8   ALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARV--LVFDVSD 65

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGIS-------YPYARFFHEVDQVLLKNLIKVNV 166
              +   +E   EA   LD  +L+NN GI+            +    D+V     I VN+
Sbjct: 66  EAAVRALIEAAVEAFGALD--ILVNNAGITRDALLPRMSEEDW----DRV-----IDVNL 114

Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
            GT  V +A LP M+K + G IVNI S + +    +P  + Y+A KA +  F+++L +E 
Sbjct: 115 TGTFNVVRAALPPMIKARYGRIVNISSVSGVT--GNPGQTNYSAAKAGVIGFTKALALEL 172

Query: 227 RKSGIDVQC 235
              GI V  
Sbjct: 173 ASRGITVNA 181

Length = 246

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score =  102 bits (257), Expect = 4e-26
 Identities = 61/186 (32%), Positives = 96/186 (51%), Gaps = 21/186 (11%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           L+TG + GIG++ A Q A+ G  +V V R  D L  V+D I    A     +V  D S D
Sbjct: 44  LLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITR--AGGDAMAVPCDLS-D 100

Query: 117 L---DEGVERIKEAIEGLDVGVLINNVG--ISYPYARF---FHEVDQVLLKNLIKVNVEG 168
           L   D  V  +++ I G+D  +LINN G  I  P A     +H+V++      + +N   
Sbjct: 101 LDAVDALVADVEKRIGGVD--ILINNAGRSIRRPLAESLDRWHDVERT-----MVLNYYA 153

Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP-SDPLYSVYAATKAYIDQFSRSLYVEYR 227
             ++ + + PGML+R  G I+N+ +    V+  + PL+SVY A+KA +   SR +  E+ 
Sbjct: 154 PLRLIRGLAPGMLERGDGHIINVATWG--VLSEASPLFSVYNASKAALSAVSRVIETEWG 211

Query: 228 KSGIDV 233
             G+  
Sbjct: 212 DRGVHS 217

Length = 293

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  101 bits (254), Expect = 5e-26
 Identities = 57/188 (30%), Positives = 96/188 (51%), Gaps = 21/188 (11%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           ALVTG + GIG++ A +LAK G  +++  R+  +  ++V + ++A   K       V   
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60

Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNVE 167
            D+   VE I+E +  +D+  L+NN GI+          D +L++        +I  N+ 
Sbjct: 61  EDVKAVVEEIEEELGPIDI--LVNNAGITR---------DNLLMRMKEEDWDAVIDTNLT 109

Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
           G   +TQAVL  M+K++ G I+NI S   ++   +   + YAA+KA +  F++SL  E  
Sbjct: 110 GVFNLTQAVLRIMIKQRSGRIINISSVVGLM--GNAGQANYAASKAGVIGFTKSLAKELA 167

Query: 228 KSGIDVQC 235
              I V  
Sbjct: 168 SRNITVNA 175

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  100 bits (252), Expect = 1e-25
 Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI-QAKYAKTQIKSVVVDFS 114
           A++TG + GIG   A   A+ G  L L GR+ ++L++   S  QA  ++ +I  VV D +
Sbjct: 6   AIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLVVADLT 65

Query: 115 GDLDEGVERI-KEAIEG---LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
              +EG +RI    +     LD  +L+NN GI         + D      ++ +N+    
Sbjct: 66  E--EEGQDRIISTTLAKFGRLD--ILVNNAGILAKGG--GEDQDIEEYDKVMNLNLRAVI 119

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
            +T+  +P  L + KG IVN+ S A     S P    Y  +KA +DQF+R   +E    G
Sbjct: 120 YLTKLAVP-HLIKTKGEIVNVSSVAG--GRSFPGVLYYCISKAALDQFTRCTALELAPKG 176

Query: 231 IDV 233
           + V
Sbjct: 177 VRV 179

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 98.5 bits (246), Expect = 6e-25
 Identities = 55/191 (28%), Positives = 85/191 (44%), Gaps = 13/191 (6%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            L+TG   GIG+  A + AK G  +V++  N    ++ ++    + A  ++     D S 
Sbjct: 2   VLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETAN--NVRKAGGKVHYYKCDVSK 59

Query: 116 DLDEGVERIKEAI--EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              E V    + I  E  DV +LINN G+     +   E+    ++   +VN       T
Sbjct: 60  R--EEVYEAAKKIKKEVGDVTILINNAGV--VSGKKLLELPDEEIEKTFEVNTLAHFWTT 115

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE---YRKSG 230
           +A LP ML+R  G IV I S A ++ P     + Y A+KA    F  SL +E   Y K G
Sbjct: 116 KAFLPDMLERNHGHIVTIASVAGLISP--AGLADYCASKAAAVGFHESLRLELKAYGKPG 173

Query: 231 IDVQCQVLFLL 241
           I       + +
Sbjct: 174 IKTTLVCPYFI 184

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 98.3 bits (246), Expect = 8e-25
 Identities = 56/185 (30%), Positives = 91/185 (49%), Gaps = 15/185 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD-VSDSIQAKYAKTQIKSVVVDFS 114
           ALVTG + GIG++ A +LA  G N+V+   + +   + +   I A   K    +V  D S
Sbjct: 8   ALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKAL--AVQGDVS 65

Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYAR--FFHEVDQVLLKNLIKVNVEGTT 170
               ++  V+  K    G+D+  L+NN GI     R      + +     +I  N+ G  
Sbjct: 66  DAESVERAVDEAKAEFGGVDI--LVNNAGI----TRDNLLMRMKEEDWDRVIDTNLTGVF 119

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
            +T+AV   M+K++ G I+NI S   ++   +P  + YAA+KA +  F++SL  E    G
Sbjct: 120 NLTKAVARPMMKQRSGRIINISSVVGLM--GNPGQANYAASKAGVIGFTKSLARELASRG 177

Query: 231 IDVQC 235
           I V  
Sbjct: 178 ITVNA 182

Length = 248

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score =  102 bits (256), Expect = 1e-24
 Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 24/185 (12%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           L+TG + GIG++ A ++A+ G  + LV RN + L ++   I+AK            ++ D
Sbjct: 375 LITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHA------YTCD 428

Query: 117 L--DEGVERIKEAI--EGLDVGVLINNVG------ISYPYARFFHEVDQVLLKNLIKVNV 166
           L     V+   + I  E   V  L+NN G      +     R FH+ ++      + VN 
Sbjct: 429 LTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDR-FHDYERT-----MAVNY 482

Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
            G  ++   +LP M +R+ G +VN+ S    V  + P +S Y A+KA +D FS     E 
Sbjct: 483 FGAVRLILGLLPHMRERRFGHVVNVSS--IGVQTNAPRFSAYVASKAALDAFSDVAASET 540

Query: 227 RKSGI 231
              GI
Sbjct: 541 LSDGI 545

Length = 657

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 98.1 bits (245), Expect = 1e-24
 Identities = 58/180 (32%), Positives = 87/180 (48%), Gaps = 5/180 (2%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVTG   GIG++ A +LA  G  +++V    D     ++ ++A   K + + V V    
Sbjct: 9   ALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRA 68

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
            L   V    E    LD  +L+ N GI  P    F E+D    + +I VN+ GT  +TQA
Sbjct: 69  ALKAAVAAGVEDFGRLD--ILVANAGIF-PLTP-FAEMDDEQWERVIDVNLTGTFLLTQA 124

Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
            LP +++   G IV   S A   +   P  + YAA+KA +  F+R+L +E     I V  
Sbjct: 125 ALPALIRAGGGRIVLTSSVAGPRVG-YPGLAHYAASKAGLVGFTRALALELAARNITVNS 183

Length = 251

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 97.8 bits (244), Expect = 2e-24
 Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 12/184 (6%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG + GIG   A  LA+ G N+V+  RN +K ++    I+      +  +   D
Sbjct: 5   GKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEK--EGVEATAFTCD 62

Query: 113 FSGDLDEGVERIKEAIEGLDVG---VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
            S +  E ++   EAIE  D G   +L+NN GI   +     E  +   +++I VN+ G 
Sbjct: 63  VSDE--EAIKAAVEAIEE-DFGKIDILVNNAGIIRRHP--AEEFPEAEWRDVIDVNLNGV 117

Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
             V+QAV   M+K+  G I+NI S  + +    P    YAA+K  +   +++L  E+ + 
Sbjct: 118 FFVSQAVARHMIKQGHGKIINICSLLSEL--GGPPVPAYAASKGGVAGLTKALATEWARH 175

Query: 230 GIDV 233
           GI V
Sbjct: 176 GIQV 179

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 97.6 bits (244), Expect = 2e-24
 Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 6/180 (3%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A+VTG + GIG+  A + A  G  +V+  RN +  + V+  I A      + + V D   
Sbjct: 8   AIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSD-EA 66

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
           D++  V    E    +D  +L+NN G ++       +VD+     +  VNV+     TQA
Sbjct: 67  DVEAAVAAALERFGSVD--ILVNNAGTTHRN-GPLLDVDEAEFDRIFAVNVKSPYLWTQA 123

Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
            +P M     GAIVN+ S A +  P  P    Y A+K  +   +++L  E     I V  
Sbjct: 124 AVPAMRGEGGGAIVNVASTAGLR-PR-PGLGWYNASKGAVITLTKALAAELGPDKIRVNA 181

Length = 251

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 96.6 bits (241), Expect = 3e-24
 Identities = 60/181 (33%), Positives = 95/181 (52%), Gaps = 8/181 (4%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
            L+TG + GIG     QL   G N V+   R+P    +++ ++ A +++  I  + +D +
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELA-ALGASHSRLHI--LELDVT 57

Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
            ++ E  E + E +    + VLINN GI + Y     EVD   L  + +VNV G   +TQ
Sbjct: 58  DEIAESAEAVAERLGDAGLDVLINNAGILHSYGPA-SEVDSEDLLEVFQVNVLGPLLLTQ 116

Query: 175 AVLPGMLKRKKGAIVNIGSGAAIV--IPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
           A LP +LK  +  I+NI S    +    S   YS Y A+KA ++  ++SL VE ++ GI 
Sbjct: 117 AFLPLLLKGARAKIINISSRVGSIGDNTSGGWYS-YRASKAALNMLTKSLAVELKRDGIT 175

Query: 233 V 233
           V
Sbjct: 176 V 176

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 96.0 bits (239), Expect = 8e-24
 Identities = 62/185 (33%), Positives = 96/185 (51%), Gaps = 10/185 (5%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  AL+TG   GIG+  A   A+ G NL+L+  +P+  K   +     +  T + + V D
Sbjct: 6   GKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRD 65

Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARF--FHEVDQVLLKNLIKVNVEGTT 170
            +  +   ++R KE    +D+  L+NN G+     R   F ++        I +N++G  
Sbjct: 66  PAS-VAAAIKRAKEKEGRIDI--LVNNAGV----CRLGSFLDMSDEDRDFHIDINIKGVW 118

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
            VT+AVLP M+ RK G IV + S    ++ +DP  + YA TKA I   ++SL VEY +SG
Sbjct: 119 NVTKAVLPEMIARKDGRIVMMSSVTGDMV-ADPGETAYALTKAAIVGLTKSLAVEYAQSG 177

Query: 231 IDVQC 235
           I V  
Sbjct: 178 IRVNA 182

Length = 263

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 95.8 bits (239), Expect = 1e-23
 Identities = 54/182 (29%), Positives = 93/182 (51%), Gaps = 16/182 (8%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           L+TG + GIG++ A  LA  G  L+LVGRN +KL+ ++  +       + + VV D +  
Sbjct: 9   LLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLP---YPGRHRWVVADLT-- 63

Query: 117 LDEGVERIKEAI-EGLDVGVLINNVGISYPYARF--FHEVDQVLLKNLIKVNVEGTTKVT 173
            + G E +     E   + VLINN G++     F    + D   ++ L+ +N+    ++T
Sbjct: 64  SEAGREAVLARAREMGGINVLINNAGVN----HFALLEDQDPEAIERLLALNLTAPMQLT 119

Query: 174 QAVLPGMLKRKKGAIVNIGSG-AAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
           +A+LP +  +    +VN+GS   +I  P    Y+ Y A+K  +  FS +L  E   +G+ 
Sbjct: 120 RALLPLLRAQPSAMVVNVGSTFGSIGYPG---YASYCASKFALRGFSEALRRELADTGVR 176

Query: 233 VQ 234
           V 
Sbjct: 177 VL 178

Length = 263

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 94.9 bits (236), Expect = 1e-23
 Identities = 63/183 (34%), Positives = 93/183 (50%), Gaps = 10/183 (5%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG + GIG++ A  LA  G  + +  R  D+L+ ++D ++A+  K  +  + +D
Sbjct: 3   GKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALV--LELD 60

Query: 113 FSGD--LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
            + +  +D  VER  EA+  LD  +L+NN GI         + D      +I  N+ G  
Sbjct: 61  VTDEQQVDAAVERTVEALGRLD--ILVNNAGIMLLGP--VEDADTTDWTRMIDTNLLGLM 116

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
             T A LP  L R KG IVNI S A  V  +    +VY ATK  ++ FS  L  E  + G
Sbjct: 117 YTTHAALPHHLLRNKGTIVNISSVAGRV--AVRNSAVYNATKFGVNAFSEGLRQEVTERG 174

Query: 231 IDV 233
           + V
Sbjct: 175 VRV 177

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 94.9 bits (237), Expect = 2e-23
 Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 13/187 (6%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVV 111
           G  A+VTG + GIG++ A  LAK G  +V+    N +  +++ + I+ +        V  
Sbjct: 5   GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIA--VKA 62

Query: 112 DFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
           D S   D++  VE+I E    +D+  L+NN GIS        ++       +I VN+ G 
Sbjct: 63  DVSSEEDVENLVEQIVEKFGKIDI--LVNNAGISN--FGLVTDMTDEEWDRVIDVNLTGV 118

Query: 170 TKVTQAVLPGMLKRKKGAIVNIGS-GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
             +T+  LP M+KRK G IVNI S    I    + LYS   A+K  ++ F+++L  E   
Sbjct: 119 MLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYS---ASKGAVNAFTKALAKELAP 175

Query: 229 SGIDVQC 235
           SGI V  
Sbjct: 176 SGIRVNA 182

Length = 247

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 93.4 bits (233), Expect = 6e-23
 Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 17/186 (9%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           ALVTG   G+G++ A +LA+ G ++V+  R + +  +++ ++++A     + ++V  D +
Sbjct: 9   ALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEA--LGRRAQAVQADVT 66

Query: 115 GDLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFF----HEVDQVLLKNLIKVNVEGT 169
            D       +  A+E    + +L+NN GI             E D+V     I VN+ G 
Sbjct: 67  -DKAALEAAVAAAVERFGRIDILVNNAGIF-EDKPLADMSDDEWDEV-----IDVNLSGV 119

Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
             + +AV+P M K++ G IVNI S A   +P  P  S YAA KA +   +++L  E  + 
Sbjct: 120 FHLLRAVVPPMRKQRGGRIVNISSVAG--LPGWPGRSNYAAAKAGLVGLTKALARELAEY 177

Query: 230 GIDVQC 235
           GI V  
Sbjct: 178 GITVNM 183

Length = 249

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 93.3 bits (232), Expect = 8e-23
 Identities = 50/185 (27%), Positives = 91/185 (49%), Gaps = 12/185 (6%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  AL+TG + GIG + A +    G ++++V R+ D L    D +  ++ + ++  +  D
Sbjct: 9   GQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAAD 68

Query: 113 FSGDLDEGVERIKEAIE----GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
            S   DE    I + +E    GL   +L+NN G +   A   +  D+   + + + N+  
Sbjct: 69  VS--DDEDRRAILDWVEDHWDGLH--ILVNNAGGNIRKAAIDYTEDE--WRGIFETNLFS 122

Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
             ++++   P + +    AIVNIGS + +        + Y  TKA + Q +R+L VE+ +
Sbjct: 123 AFELSRYAHPLLKQHASSAIVNIGSVSGLT--HVRSGAPYGMTKAALLQMTRNLAVEWAE 180

Query: 229 SGIDV 233
            GI V
Sbjct: 181 DGIRV 185

Length = 257

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 92.7 bits (231), Expect = 1e-22
 Identities = 56/186 (30%), Positives = 82/186 (44%), Gaps = 12/186 (6%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           A++TG   GIG + A  L K G  + ++ RN +     +  +QA   K +   V  D + 
Sbjct: 3   AIITGGASGIGLATAKLLLKKGAKVAILDRNEN--PGAAAELQAINPKVKATFVQCDVTS 60

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              L    ++  E    +D  +LINN GI    +  F        +  I VN+ G    T
Sbjct: 61  WEQLAAAFKKAIEKFGRVD--ILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTT 118

Query: 174 QAVLPGMLKRKK---GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE-YRKS 229
              L  M K K    G IVNIGS A +     P + VY+A+K  +  F+RSL      K+
Sbjct: 119 YLALHYMDKNKGGKGGVIVNIGSVAGLY--PAPQFPVYSASKHGVVGFTRSLADLLEYKT 176

Query: 230 GIDVQC 235
           G+ V  
Sbjct: 177 GVRVNA 182

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 92.4 bits (230), Expect = 1e-22
 Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 6/180 (3%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            L+TG + GIG++ A + AK G N+ L  R  D+L ++   +       +++ + V    
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEE 60

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
                +  ++  + GLD+ ++   VG          +      +  I  N+ G   + +A
Sbjct: 61  RNQLVIAELEAELGGLDLVIINAGVGKGTSLGDLSFKAF----RETIDTNLLGAAAILEA 116

Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
            LP    + +G +V I S AA+     P  + Y+A+KA +   + SL  + +K GI V  
Sbjct: 117 ALPQFRAKGRGHLVLISSVAALR--GLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTV 174

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 90.6 bits (225), Expect = 7e-22
 Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 14/180 (7%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           L+TG   GIG + A +  + G  +++ GRN ++L +             I + V D   D
Sbjct: 9   LITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPE------IHTEVCDV-AD 61

Query: 117 LD---EGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
            D   E VE +K+    L+V  LINN GI         E      +  I  N+    ++T
Sbjct: 62  RDSRRELVEWLKKEYPNLNV--LINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLT 119

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
             +LP +L++ +  I+N+ SG A V        VY ATKA I  ++ +L  + + + ++V
Sbjct: 120 ALLLPHLLRQPEATIINVSSGLAFV--PMASTPVYCATKAAIHSYTLALREQLKDTSVEV 177

Length = 245

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 90.5 bits (225), Expect = 1e-21
 Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 12/181 (6%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            LVTG   GIG++ A   A+ G  + +   +   L     +  A+    ++ + V D + 
Sbjct: 14  VLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAAL----AATAARLPGAKVTATVADVAD 69

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              ++   +   E   GLD  VL+NN GI+ P      E+     +  + VN+ G     
Sbjct: 70  PAQVERVFDTAVERFGGLD--VLVNNAGIAGPTGG-IDEITPEQWEQTLAVNLNGQFYFA 126

Query: 174 QAVLPGMLKRKKG-AIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
           +A +P +     G  I+ + S A  +    P  + YAA+K  +    +SL +E    GI 
Sbjct: 127 RAAVPLLKASGHGGVIIALSSVAGRL--GYPGRTPYAASKWAVVGLVKSLAIELGPLGIR 184

Query: 233 V 233
           V
Sbjct: 185 V 185

Length = 264

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 88.2 bits (219), Expect = 7e-21
 Identities = 47/187 (25%), Positives = 73/187 (39%), Gaps = 20/187 (10%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVTG   GIG + A  LA  G N+V+     +  +  +                V    
Sbjct: 4   ALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVTKED 63

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGI-------SYPYARFFHEVDQVLLKNLIKVNVEG 168
           ++ + +        GLD  +L+NN GI        +P   +           +I V +  
Sbjct: 64  EIADMIAAAAAEFGGLD--ILVNNAGIQHVAPIEEFPPEDW---------DRIIAVMLTS 112

Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
                +A LP M K+  G I+NI S   +V  + P  S Y A K  +   ++ L +E  +
Sbjct: 113 AFHTIRAALPHMKKQGWGRIINIASAHGLV--ASPFKSAYVAAKHGLIGLTKVLALEVAE 170

Query: 229 SGIDVQC 235
            GI V  
Sbjct: 171 HGITVNA 177

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 87.7 bits (218), Expect = 9e-21
 Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 10/185 (5%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVT  + GIG + A  LA+ G  + +  RN + L+  +  ++A      + +VV D
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRA--GGAGVLAVVAD 58

Query: 113 FS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
            +   D+D  VE+  +A   +D+  L+NN G   P    F E+          + +    
Sbjct: 59  LTDPEDIDRLVEKAGDAFGRVDI--LVNNAG--GPPPGPFAELTDEDWLEAFDLKLLSVI 114

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
           ++ +AVLPGM +R  G IVNI S      P   L  +    +A +    ++L  E    G
Sbjct: 115 RIVRAVLPGMKERGWGRIVNISSLTVKE-PEPNL-VLSNVARAGLIGLVKTLSRELAPDG 172

Query: 231 IDVQC 235
           + V  
Sbjct: 173 VTVNS 177

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 87.0 bits (216), Expect = 2e-20
 Identities = 56/179 (31%), Positives = 88/179 (49%), Gaps = 7/179 (3%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A+VTG + G G     +LAK G  ++   RNP+K +++         +  IK   +D + 
Sbjct: 6   AIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD 65

Query: 116 DLDEGVERIKEAIEGLD-VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
                +   +  ++ +  + +L+NN G  Y    F  E+     +   + NV G   VTQ
Sbjct: 66  Q--NSIHNFQLVLKEIGRIDLLVNNAG--YANGGFVEEIPVEEYRKQFETNVFGAISVTQ 121

Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           AVLP M K+K G I+NI S +  V    P  S Y ++K  ++ FS SL +E +  GIDV
Sbjct: 122 AVLPYMRKQKSGKIINISSISGRVGF--PGLSPYVSSKYALEGFSESLRLELKPFGIDV 178

Length = 280

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 85.5 bits (212), Expect = 5e-20
 Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 20/194 (10%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            L+TG    IGK+F   L   G  L+L   N   L+ + + +   Y K ++ ++ +D   
Sbjct: 5   ILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLY-KNRVIALELDI-- 61

Query: 116 DLDEGVERIKEAIEGLD-----VGVLINNVGIS-YPYARFFHEVDQVLLKNLIKVNVEGT 169
                 E IKE IE        + +LINN   S   +   F E        ++ VN+ G 
Sbjct: 62  ---TSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGA 118

Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS--------VYAATKAYIDQFSRS 221
              +QA +    K+ KG+I+NI S   ++ P   +Y          Y+  KA I   ++ 
Sbjct: 119 FLCSQAFIKLFKKQGKGSIINIASIYGVIAPDFRIYENTQMYSPVEYSVIKAGIIHLTKY 178

Query: 222 LYVEYRKSGIDVQC 235
           L   Y  +GI V  
Sbjct: 179 LAKYYADTGIRVNA 192

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 85.6 bits (212), Expect = 6e-20
 Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 5/184 (2%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVV 111
           G  A VTG   GIG+  A  LA+ G ++ L   R  D L + ++ I+A   +    +  V
Sbjct: 8   GQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADV 67

Query: 112 DFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
               DL   V R +  +  L + V  N  GI+        E +Q   + ++ +N+ G   
Sbjct: 68  TSKADLRAAVARTEAELGALTLAV--NAAGIANANPAEEMEEEQ--WQTVMDINLTGVFL 123

Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
             QA    ML+   G+IVNI S + I++    L + Y A+KA +   S+SL +E+   GI
Sbjct: 124 SCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWVGRGI 183

Query: 232 DVQC 235
            V  
Sbjct: 184 RVNS 187

Length = 254

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 85.0 bits (211), Expect = 1e-19
 Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 14/182 (7%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVTG   G+G +FA  LA+ G  +        + ++++ +++A  A  +  ++  D + 
Sbjct: 10  ALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEA--AGGRAHAIAADLAD 67

Query: 116 DLDEGVERIKEAIE----GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
                V+R  +A      GLD   L+NN GI+   ++   E+D      ++ VNV GT  
Sbjct: 68  P--ASVQRFFDAAAAALGGLDG--LVNNAGITN--SKSATELDIDTWDAVMNVNVRGTFL 121

Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           + +A LP +    +G IVN+ S  A+     P    Y A+K  +   +RSL  E    GI
Sbjct: 122 MLRAALPHLRDSGRGRIVNLASDTALW--GAPKLGAYVASKGAVIGMTRSLARELGGRGI 179

Query: 232 DV 233
            V
Sbjct: 180 TV 181

Length = 250

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 84.8 bits (210), Expect = 1e-19
 Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 24/188 (12%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  AL+T    GIG++ A   A+ G N++    N +KLK++            I + V+D
Sbjct: 2   GKVALITAAAQGIGRAIALAFAREGANVIATDINEEKLKELE-------RGPGITTRVLD 54

Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFH-----EVDQVLLKNLIKVNVE 167
            +    E V  + +    +DV  L N  G       F H     + +       + +NV 
Sbjct: 55  VTDK--EQVAALAKEEGRIDV--LFNCAG-------FVHHGSILDCEDDDWDFAMNLNVR 103

Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
               + +AVLP ML RK G+I+N+ S A+  I   P   VY+ TKA +   ++S+  ++ 
Sbjct: 104 SMYLMIKAVLPKMLARKDGSIINMSSVAS-SIKGVPNRFVYSTTKAAVIGLTKSVAADFA 162

Query: 228 KSGIDVQC 235
           + GI    
Sbjct: 163 QQGIRCNA 170

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 85.4 bits (212), Expect = 1e-19
 Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 10/190 (5%)

Query: 44  RPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAK 103
            P  +L   G   +VTG   GIG   A +L   G  L LV     +L  ++  +      
Sbjct: 2   PPMTSLA--GKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRV 59

Query: 104 TQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIK 163
             + + V D +  +    E   E   G+D  V++ N GI+         VD    + +I 
Sbjct: 60  LTVVADVTDLAA-MQAAAEEAVERFGGID--VVVANAGIA-SGGSVAQ-VDPDAFRRVID 114

Query: 164 VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
           VN+ G     +A LP +++R +G ++ + S AA    + P  + Y A+KA ++ F+ +L 
Sbjct: 115 VNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFA--AAPGMAAYCASKAGVEAFANALR 171

Query: 224 VEYRKSGIDV 233
           +E    G+ V
Sbjct: 172 LEVAHHGVTV 181

Length = 296

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 84.6 bits (210), Expect = 1e-19
 Identities = 54/188 (28%), Positives = 85/188 (45%), Gaps = 23/188 (12%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           ALVTG + GIG++ A +LA+ G ++V+    +    ++V   I+A   K       +   
Sbjct: 6   ALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGGK------AIAVQ 59

Query: 115 GDLD--EGVERIKEAIE----GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
            D+     V R+ +A E    G+D+  L+NN G+     +   E  +     +  VN +G
Sbjct: 60  ADVSDPSQVARLFDAAEKAFGGVDI--LVNNAGVMLK--KPIAETSEEEFDRMFTVNTKG 115

Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGA-AIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
              V Q     +  R  G I+NI S   A   P+   Y  YA +KA ++ F+R L  E  
Sbjct: 116 AFFVLQEAAKRL--RDGGRIINISSSLTAAYTPN---YGAYAGSKAAVEAFTRVLAKELG 170

Query: 228 KSGIDVQC 235
             GI V  
Sbjct: 171 GRGITVNA 178

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 83.8 bits (208), Expect = 2e-19
 Identities = 54/181 (29%), Positives = 89/181 (49%), Gaps = 10/181 (5%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           ALVTG   GIG     QLAK+G   V++  R+ ++ +   + ++A+    +   + V   
Sbjct: 3   ALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVTDD 62

Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
             ++   + ++E   GLD+  L+NN GI++          +   +  +K N  GT  VTQ
Sbjct: 63  ASIEAAADFVEEKYGGLDI--LVNNAGIAFK-GFDDSTPTREQARETMKTNFFGTVDVTQ 119

Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQ 234
           A+LP + K   G IVN+ SG         L S Y  +KA ++  +R L  E +++GI V 
Sbjct: 120 ALLPLLKKSPAGRIVNVSSGLGS------LTSAYGVSKAALNALTRILAKELKETGIKVN 173

Query: 235 C 235
            
Sbjct: 174 A 174

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 83.9 bits (208), Expect = 3e-19
 Identities = 57/181 (31%), Positives = 91/181 (50%), Gaps = 12/181 (6%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            ++TG ++GIG++ A +LA+ G  LVL  RN  +L  ++  +       +   V  D S 
Sbjct: 4   VIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELAD--HGGEALVVPTDVS- 60

Query: 116 DLDEGVERIKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
           D +     I+ A+    G+D  +L+NN GI+  ++RF    D  + + +++VN  G    
Sbjct: 61  DAEACERLIEAAVARFGGID--ILVNNAGITM-WSRFDELTDLSVFERVMRVNYLGAVYC 117

Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
           T A LP  LK  +G IV + S A   +   P  S YAA+K  +  F  SL +E    G+ 
Sbjct: 118 THAALPH-LKASRGQIVVVSSLAG--LTGVPTRSGYAASKHALHGFFDSLRIELADDGVA 174

Query: 233 V 233
           V
Sbjct: 175 V 175

Length = 263

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 82.7 bits (204), Expect = 6e-19
 Identities = 58/178 (32%), Positives = 92/178 (51%), Gaps = 6/178 (3%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A+VTG   GIG +   + A+ G  + +   N +  + V+  I+AK    Q  +  +    
Sbjct: 6   AIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRD 65

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
            +D  V   ++A+  +DV  L+NN G  +     F + +  L + LI +N+ G   +  A
Sbjct: 66  SVDTAVAAAEQALGPVDV--LVNNAG--WDKFGPFTKTEPPLWERLIAINLTGALHMHHA 121

Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           VLPGM++R  G IVNI S AA V  S    +VYAA K  +  FS+++  E+ + GI V
Sbjct: 122 VLPGMVERGAGRIVNIASDAARVGSSGE--AVYAACKGGLVAFSKTMAREHARHGITV 177

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 82.7 bits (205), Expect = 7e-19
 Identities = 57/183 (31%), Positives = 84/183 (45%), Gaps = 20/183 (10%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            LVTG   GIG + A  LA+ G  +  V RN ++L ++   ++          + V  S 
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSA 60

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGI-------SYPYARFFHEVDQVLLKNLIKVNVEG 168
            +DE V+R++     +DV  L+N  GI       S        +           VN  G
Sbjct: 61  AVDEVVQRLEREYGPIDV--LVNVAGILRLGAIDSLS----DEDWQATF-----AVNTFG 109

Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
              V+QAV P M +R+ GAIV +GS AA V P     + YAA+KA +   ++ L +E   
Sbjct: 110 VFNVSQAVSPRMKRRRSGAIVTVGSNAANV-PR-MGMAAYAASKAALTMLTKCLGLELAP 167

Query: 229 SGI 231
            GI
Sbjct: 168 YGI 170

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 82.2 bits (203), Expect = 9e-19
 Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 12/181 (6%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  A+VTG   GIG + A +LA+ G  +V+   +    + V   I          ++ VD
Sbjct: 3   GKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGAL-----ALRVD 57

Query: 113 FSG--DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
            +    +    ER  E   GLD+  L+NN G  +       + D  +    + +N+ GT 
Sbjct: 58  VTDEQQVAALFERAVEEFGGLDL--LVNNAGAMH-LTPAIIDTDLAVWDQTMAINLRGTF 114

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
              +   P M+ R  G+IVN+ S A      DP Y  Y A+KA I   +R+L  E R +G
Sbjct: 115 LCCRHAAPRMIARGGGSIVNLSSIAGQS--GDPGYGAYGASKAAIRNLTRTLAAELRHAG 172

Query: 231 I 231
           I
Sbjct: 173 I 173

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 83.0 bits (206), Expect = 1e-18
 Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 16/184 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            ++TG + G+G++ A   A+ G  +VL+ R  + L+ ++  I+A   +     VV D   
Sbjct: 11  VVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALA--VVADV-A 67

Query: 116 DLDEGVERIKEAIE----GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
           D +  V+   +  E     +D  V  NN  ++  +   F +V     + + +V   G   
Sbjct: 68  DAEA-VQAAADRAEEELGPIDTWV--NNAMVTV-FGP-FEDVTPEEFRRVTEVTYLGVVH 122

Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE--YRKS 229
            T A L  M  R +GAI+ +GS  A    S PL S Y A K  I  F+ SL  E  +  S
Sbjct: 123 GTLAALRHMRPRDRGAIIQVGSALAYR--SIPLQSAYCAAKHAIRGFTDSLRCELLHDGS 180

Query: 230 GIDV 233
            + V
Sbjct: 181 PVSV 184

Length = 334

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 81.5 bits (201), Expect = 2e-18
 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 23/194 (11%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  A+VTG   GIGK  A +LA+ G  + +   N D    V+D I     K    ++ V 
Sbjct: 7   GKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVT 66

Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGI-------SYPYARFFHEVDQVLLKNLIKVN 165
               ++ G++++ E    +D  +L++N GI       +Y +A +         K +  ++
Sbjct: 67  NEDAVNAGIDKVAERFGSVD--ILVSNAGIQIVNPIENYSFADW---------KKMQAIH 115

Query: 166 VEGTTKVTQAVLPGMLK-RKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYV 224
           V+G    T+A L  M K  + G ++ +GS  +    + PL S Y   K  +   +R L  
Sbjct: 116 VDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHE--ASPLKSAYVTAKHGLLGLARVLAK 173

Query: 225 EYRKSGIDVQCQVL 238
           E   +  +V+  V+
Sbjct: 174 E--GAKHNVRSHVV 185

Length = 262

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 83.4 bits (206), Expect = 3e-18
 Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 12/181 (6%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            LVTG   GIG++   + A+ G  +V+  RN ++ ++ +DS+   +      ++ +D S 
Sbjct: 8   VLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDH-----HALAMDVSD 62

Query: 116 DLD--EGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
           +    EG E++      +D  VL+NN G++ P      +        L  +N+ G   V 
Sbjct: 63  EAQIREGFEQLHREFGRID--VLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVA 120

Query: 174 QAVLPGMLKRKKG-AIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
           +  L  M+++  G AIVN+ SGA +V  + P  + Y+A+KA +   +RSL  E+   GI 
Sbjct: 121 REALRLMIEQGHGAAIVNVASGAGLV--ALPKRTAYSASKAAVISLTRSLACEWAAKGIR 178

Query: 233 V 233
           V
Sbjct: 179 V 179

Length = 520

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 80.6 bits (199), Expect = 3e-18
 Identities = 54/174 (31%), Positives = 84/174 (48%), Gaps = 15/174 (8%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG   GIG++    LAK G  +V V R    L    DS+  +     I+ V VD
Sbjct: 7   GKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADL----DSLVRE--CPGIEPVCVD 60

Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
            S    +  E    ++  +D  +L+NN  ++      F EV +        VNV     V
Sbjct: 61  LSD--WDATEEALGSVGPVD--LLVNNAAVAILQP--FLEVTKEAFDRSFDVNVRAVIHV 114

Query: 173 TQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
           +Q V  GM+ R   G+IVN+ S A+    ++  ++VY +TKA +D  ++ + +E
Sbjct: 115 SQIVARGMIARGVPGSIVNVSSQASQRALTN--HTVYCSTKAALDMLTKVMALE 166

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 80.6 bits (199), Expect = 4e-18
 Identities = 53/186 (28%), Positives = 84/186 (45%), Gaps = 22/186 (11%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            L+TG   GIG   A  LA+ G  +++     ++ +     ++ +  K       V    
Sbjct: 12  ILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQ 71

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGIS--YPYARF-FHEVDQVLLKNLIKVNVEGTTKV 172
           +++  +E I++ I  +D  VLINN GI   +P+  F   E + V     I VN      V
Sbjct: 72  EVEAAIEHIEKDIGPID--VLINNAGIQRRHPFTEFPEQEWNDV-----IAVNQTAVFLV 124

Query: 173 TQAVLPGMLKRKKGAIVNIGS-----GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
           +QAV   M+KR+ G I+NI S     G   + P       YAA+K  +   +R + VE  
Sbjct: 125 SQAVARYMVKRQAGKIINICSMQSELGRDTITP-------YAASKGAVKMLTRGMCVELA 177

Query: 228 KSGIDV 233
           +  I V
Sbjct: 178 RHNIQV 183

Length = 254

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 80.3 bits (199), Expect = 4e-18
 Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 24/190 (12%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A +TG   GIGK+ A   A+ G ++ + GR P+ L+  ++ I +                
Sbjct: 6   AFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISS-----ATGGRAHPIQC 60

Query: 116 DL--DEGVER-IKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
           D+   E VE  + E ++    + +LINN   ++        +     K +I +++ GT  
Sbjct: 61  DVRDPEAVEAAVDETLKEFGKIDILINNAAGNFLAP--AESLSPNGFKTVIDIDLNGTFN 118

Query: 172 VTQAVLPGMLKRKKGA-IVNIG-----SGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
            T+AV   +++ K G  I+NI      +G+   + S       AA KA +D  +RSL VE
Sbjct: 119 TTKAVGKRLIEAKHGGSILNISATYAYTGSPFQVHS-------AAAKAGVDALTRSLAVE 171

Query: 226 YRKSGIDVQC 235
           +   GI V  
Sbjct: 172 WGPYGIRVNA 181

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 80.2 bits (198), Expect = 6e-18
 Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 13/185 (7%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG T GIG +   +LA  G  +    RN  +L +     + K    +++  V D
Sbjct: 6   GKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREK--GFKVEGSVCD 63

Query: 113 FSGDLDEGVERIKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
            S       + + + +    G  + +L+NN G +       +  +      ++  N E  
Sbjct: 64  VS--SRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEED--YSLIMSTNFEAA 119

Query: 170 TKVTQAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
             +++   P +LK    G IV I S A ++  + P  + Y ATK  ++Q +RSL  E+ K
Sbjct: 120 YHLSRLAHP-LLKASGNGNIVFISSVAGVI--AVPSGAPYGATKGALNQLTRSLACEWAK 176

Query: 229 SGIDV 233
             I V
Sbjct: 177 DNIRV 181

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 79.8 bits (197), Expect = 8e-18
 Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 9/178 (5%)

Query: 54  SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF 113
             ALVTG   GIG++ A +    G  ++ +  +   L   +D++       +   V  D 
Sbjct: 3   RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDA----RFVPVACDL 58

Query: 114 SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
           +            A E   V VL+ N G +   A   H+      +    +N+E      
Sbjct: 59  TDAASLAAALANAAAERGPVDVLVANAGAAR--AASLHDTTPASWRADNALNLEAAYLCV 116

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           +AVL GMLKR +GA+VNIGS   +     P YS   A KA +  +++ L VEY + GI
Sbjct: 117 EAVLEGMLKRSRGAVVNIGSVNGMAALGHPAYS---AAKAGLIHYTKLLAVEYGRFGI 171

Length = 257

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 80.0 bits (198), Expect = 8e-18
 Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 18/182 (9%)

Query: 58  VTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI-QAKYAKTQIKSVVVD---F 113
           +TG   GIG + A  LA  G  + +   +    K+ +  +             V D   F
Sbjct: 10  ITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLD----VTDPASF 65

Query: 114 SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
           +  LD  VE      +   + VL+NN G+  P   F  E D V  + L  VNV G    +
Sbjct: 66  AAFLDA-VEA-----DLGPIDVLVNNAGV-MPVGPFLDEPDAVTRRIL-DVNVYGVILGS 117

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           +   P M+ R +G +VN+ S  A  IP  P  + Y A+K  +  F+ +  +E R +G+ V
Sbjct: 118 KLAAPRMVPRGRGHVVNVAS-LAGKIPV-PGMATYCASKHAVVGFTDAARLELRGTGVHV 175

Query: 234 QC 235
             
Sbjct: 176 SV 177

Length = 273

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 80.0 bits (198), Expect = 8e-18
 Identities = 52/198 (26%), Positives = 81/198 (40%), Gaps = 22/198 (11%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G   ++TG   GIGK  A +LAK G ++++  RN +K ++ +  I+ +    +++ + +D
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLD 60

Query: 113 FSGDLD---EGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
            S  L    +  E        LD  +LINN GI  P        D    +    VN  G 
Sbjct: 61  LS-SLASVRQFAEEFLARFPRLD--ILINNAGIMAP--PRRLTKDG--FELQFAVNYLGH 113

Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD---------PLYS---VYAATKAYIDQ 217
             +T  +LP +       IVN+ S A    P D           YS    Y  +K     
Sbjct: 114 FLLTNLLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLANIL 173

Query: 218 FSRSLYVEYRKSGIDVQC 235
           F+R L      +G+ V  
Sbjct: 174 FTRELARRLEGTGVTVNA 191

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 79.9 bits (198), Expect = 8e-18
 Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 22/147 (14%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           ALVTG   GIG   A  LAK G  +V+   N +     ++++Q   A  +   V +D + 
Sbjct: 7   ALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQK--AGGKAIGVAMDVTD 64

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGI-------SYPYARFFHEVDQVLLKNLIKVNV 166
              ++ G++   E   G+D  +L+NN GI        +P  ++         K +I + +
Sbjct: 65  EEAINAGIDYAVETFGGVD--ILVNNAGIQHVAPIEDFPTEKW---------KKMIAIML 113

Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGS 193
           +G    T+A LP M  +  G I+N+ S
Sbjct: 114 DGAFLTTKAALPIMKAQGGGRIINMAS 140

Length = 258

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 79.6 bits (197), Expect = 1e-17
 Identities = 59/184 (32%), Positives = 92/184 (50%), Gaps = 26/184 (14%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVTG + GIG++ A +LA+ G  +    RNP +                ++ + +D + 
Sbjct: 7   ALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA----------PIPGVELLELDVTD 56

Query: 116 DLDEGVER-IKEAI--EG-LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
           D    V+  + E I   G +DV  L+NN G+    A     + Q   + L   NV G  +
Sbjct: 57  D--ASVQAAVDEVIARAGRIDV--LVNNAGVGLAGAAEESSIAQA--QALFDTNVFGILR 110

Query: 172 VTQAVLPGMLKRKKGAIVNIGS--GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
           +T+AVLP M  +  G I+NI S  G    +P+ P  ++YAA+K  ++ +S SL  E R+ 
Sbjct: 111 MTRAVLPHMRAQGSGRIINISSVLG---FLPA-PYMALYAASKHAVEGYSESLDHEVRQF 166

Query: 230 GIDV 233
           GI V
Sbjct: 167 GIRV 170

Length = 270

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 79.0 bits (195), Expect = 1e-17
 Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 20/172 (11%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           LVTG T G G+    +  + G  ++  GR  ++L+++ D +       Q+    V     
Sbjct: 4   LVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLD---VRNRAA 60

Query: 117 LDEGVERIKEAIEGLDVGVLINNVGISY---PYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
           ++E +  +      +DV  L+NN G++    P     H+      + +I  N +G   +T
Sbjct: 61  IEEMLASLPAEWRNIDV--LVNNAGLALGLEPA----HKASVEDWETMIDTNNKGLVYMT 114

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS---VYAATKAYIDQFSRSL 222
           +AVLPGM++R  G I+NIGS A     S P Y+   VY ATKA++ QFS +L
Sbjct: 115 RAVLPGMVERNHGHIINIGSTAG----SWP-YAGGNVYGATKAFVRQFSLNL 161

Length = 248

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 79.6 bits (197), Expect = 1e-17
 Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 29/197 (14%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A++TG    +G + A +LA+ G  + ++ RN +K + V   I+A  A  +  +V  D   
Sbjct: 13  AVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKA--AGGEALAVKADV-- 68

Query: 116 DLDEG-VERIKEAIEGLDVG---VLINNVGISYPYARFFHEVDQVL--LKNLIKVNVEGT 169
            LD+  +E+ ++ I   D G   +LIN  G ++P A   +E  +++   K    ++ EG 
Sbjct: 69  -LDKESLEQARQQILE-DFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGF 126

Query: 170 TKV-----------TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV--YAATKAYID 216
             V           TQ     M+ RK G I+NI S  A      PL  V  Y+A KA I 
Sbjct: 127 EFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFT----PLTKVPAYSAAKAAIS 182

Query: 217 QFSRSLYVEYRKSGIDV 233
            F++ L V + K GI V
Sbjct: 183 NFTQWLAVHFAKVGIRV 199

Length = 278

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 78.7 bits (194), Expect = 2e-17
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 14/186 (7%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG + GIG + A  LA+ G  ++L GR+P KL   ++S++ +       +  V 
Sbjct: 10  GRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVT 69

Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEVDQVLLKNLIKVNVEGTT 170
               +   ++  +  I  +D  +L+NN G+ +  P   F  +  + LL+     N+    
Sbjct: 70  DHDAVRAAIDAFEAEIGPID--ILVNNAGMQFRTPLEDFPADAFERLLRT----NISSVF 123

Query: 171 KVTQAVLPGMLKRKKGAIVNIGS-GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
            V QAV   M+ R  G I+NI S  +A+  P     + Y ATK  +   ++ +  ++ K 
Sbjct: 124 YVGQAVARHMIARGAGKIINIASVQSALARPG---IAPYTATKGAVGNLTKGMATDWAKH 180

Query: 230 GIDVQC 235
           G+  QC
Sbjct: 181 GL--QC 184

Length = 255

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 78.2 bits (193), Expect = 3e-17
 Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 13/182 (7%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A+VTG   G+G + A  L   G  +VL     ++ +  +  +         +   +D + 
Sbjct: 8   AIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAEL-----GDAARFFHLDVTD 62

Query: 116 DLD--EGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
           +      V+  +EA   LDV  L+NN GI                + L+ +N+ G    T
Sbjct: 63  EDGWTAVVDTAREAFGRLDV--LVNNAGILTG--GTVETTTLEEWRRLLDINLTGVFLGT 118

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           +AV+P M +   G+I+N+ S   +V   DP  + Y A+K  +   ++S  +E    G  +
Sbjct: 119 RAVIPPMKEAGGGSIINMSSIEGLV--GDPALAAYNASKGAVRGLTKSAALECATQGYGI 176

Query: 234 QC 235
           + 
Sbjct: 177 RV 178

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 77.9 bits (192), Expect = 4e-17
 Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 13/184 (7%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKT--QIKSVVVDF 113
           ALVTG   GIG + A +L   G  ++    +     D +     +Y  T  Q++   +D 
Sbjct: 5   ALVTGAKRGIGSAIARELLNDGYRVIATYFSG---NDCAKDWFEEYGFTEDQVRLKELDV 61

Query: 114 SGDLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
           + D +E  E + E  E    V +L+NN GI+      F  +      ++I  N+     V
Sbjct: 62  T-DTEECAEALAEIEEEEGPVDILVNNAGITRDSV--FKRMSHQEWNDVINTNLNSVFNV 118

Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           TQ +   M ++  G I+NI S   +        YS   A KA +  F+++L  E  + GI
Sbjct: 119 TQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYS---AAKAGMIGFTKALASEGARYGI 175

Query: 232 DVQC 235
            V C
Sbjct: 176 TVNC 179

Length = 245

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 76.1 bits (188), Expect = 4e-17
 Identities = 41/172 (23%), Positives = 69/172 (40%), Gaps = 15/172 (8%)

Query: 55  WALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRN--PDKLKDVSDSIQAKYAKTQIKSV-V 110
             L+TG T G+G + A  LA  G  +LVLV R        ++   ++A  A+  + +  V
Sbjct: 2   TVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACDV 61

Query: 111 VDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
            D    L   +  +  A+  LD   +++N G+         E+     + ++   V G  
Sbjct: 62  ADRD-ALAALLAALPAALGPLD--GVVHNAGVLDD--GPLEELTPERFERVLAPKVTGAW 116

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSL 222
            + +           GA V   S A  V+ S P  + YAA  A +D  +   
Sbjct: 117 NLHELTRD----LDLGAFVLFSSVAG-VLGS-PGQANYAAANAALDALAEHR 162

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 77.4 bits (191), Expect = 6e-17
 Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 30/195 (15%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVL---------VGRNPDKLKDVSDSIQAKYAKTQI 106
            LVTG   G+G+++A   A+ G  +V+          G++      V D I+A   K   
Sbjct: 8   VLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAAGGKA-- 65

Query: 107 KSVVVDFSGDLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVN 165
               V     +++G + +K AI+    V +L+NN GI     R F ++ +     +++V+
Sbjct: 66  ----VANYDSVEDGEKIVKTAIDAFGRVDILVNNAGILRD--RSFAKMSEEDWDLVMRVH 119

Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY-----SVYAATKAYIDQFSR 220
           ++G+ KVT+A  P M K+K G I+N  S A +       Y     + Y+A K  +   S 
Sbjct: 120 LKGSFKVTRAAWPYMRKQKFGRIINTSSAAGL-------YGNFGQANYSAAKLGLLGLSN 172

Query: 221 SLYVEYRKSGIDVQC 235
           +L +E  K  I    
Sbjct: 173 TLAIEGAKYNITCNT 187

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 77.3 bits (191), Expect = 7e-17
 Identities = 56/190 (29%), Positives = 92/190 (48%), Gaps = 28/190 (14%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            +VTG   GIG+  A + A  G  +VLV R+ + + +V+  ++A   +       +  + 
Sbjct: 11  VVVTGAAQGIGRGVALRAAAEGARVVLVDRS-ELVHEVAAELRAAGGE------ALALTA 63

Query: 116 DLD--EGVER-IKEAIE---GLDVGVLINNVGISY---PYARFF-HEVDQVLLKNLIKVN 165
           DL+   G +  +  A+E    +DV  LINNVG +    P+  +   +++  + ++L    
Sbjct: 64  DLETYAGAQAAMAAAVEAFGRIDV--LINNVGGTIWAKPFEEYEEEQIEAEIRRSLFP-- 119

Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
              T    +AVLP ML +  GAIVN+ S A   I   P    Y+A K  ++  + SL  E
Sbjct: 120 ---TLWCCRAVLPHMLAQGGGAIVNVSSIATRGINRVP----YSAAKGGVNALTASLAFE 172

Query: 226 YRKSGIDVQC 235
           Y + GI V  
Sbjct: 173 YAEHGIRVNA 182

Length = 260

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 76.9 bits (190), Expect = 8e-17
 Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 21/181 (11%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLN--LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           ++TG + GIG++ A +L K G    +VL+ R+ + L       Q    + +    V    
Sbjct: 3   ILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPL-------QELKEELRPGLRVTTVK 55

Query: 115 GDLD--EGVERIKEAIEGLDVG--VLINNVGISYPYAR-FFHEVDQVLLKNLIKVNVEGT 169
            DL    GVE++ EAI  LD    +LINN G   P ++  F ++D+  L+    +N+   
Sbjct: 56  ADLSDAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDE--LQKYFDLNLTSP 113

Query: 170 TKVTQAVLPGMLKRK-KGAIVNIGSGAAI-VIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
             +T  +L    KR  K  +VN+ SGAA+        + +Y ++KA  D F R L  E  
Sbjct: 114 VCLTSTLLRAFKKRGLKKTVVNVSSGAAVNPFKG---WGLYCSSKAARDMFFRVLAAEEP 170

Query: 228 K 228
            
Sbjct: 171 D 171

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 76.3 bits (188), Expect = 1e-16
 Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 14/180 (7%)

Query: 58  VTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDL 117
           +TG + GIG++ A   A+ G  +VL  R+ + L +++  +  +    +  +VV D   D 
Sbjct: 5   ITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREV--RELGGEAIAVVADV-ADA 61

Query: 118 DEGVERIKE-AIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
            + VER  + A+E    +   +NN G++  + R F +V     + +  VN  G    T A
Sbjct: 62  AQ-VERAADTAVERFGRIDTWVNNAGVAV-FGR-FEDVTPEEFRRVFDVNYLGHVYGTLA 118

Query: 176 VLPGMLKRKKGAIVNIGS--GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
            LP + +R  GA++N+GS  G        PL + Y+A+K  +  F+ SL  E    G  +
Sbjct: 119 ALPHLRRRGGGALINVGSLLGYRSA----PLQAAYSASKHAVRGFTESLRAELAHDGAPI 174

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 76.4 bits (188), Expect = 1e-16
 Identities = 50/186 (26%), Positives = 79/186 (42%), Gaps = 11/186 (5%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVTG + GIG + A  L + G+ +V   R  DK++ ++   Q+      +     D S 
Sbjct: 9   ALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSA-GYPTLFPYQCDLSN 67

Query: 116 --DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              +      I+   +G+D  V INN G++ P             K +  VNV   +  T
Sbjct: 68  EEQILSMFSAIRTQHQGVD--VCINNAGLARP--EPLLSGKTEGWKEMFDVNVLALSICT 123

Query: 174 QAVLPGMLKRK--KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR--KS 229
           +     M +R    G I+NI S +   +P   ++  YAATK  +   +  L  E R  K+
Sbjct: 124 REAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQELREAKT 183

Query: 230 GIDVQC 235
            I    
Sbjct: 184 HIRATS 189

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 76.4 bits (188), Expect = 2e-16
 Identities = 55/182 (30%), Positives = 91/182 (50%), Gaps = 15/182 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A++TG + GIG++ A  LA+ G   VL     + + +  D I  K    + K+  VD S 
Sbjct: 9   AVITGASTGIGQASAIALAQEGAY-VLAVDIAEAVSETVDKI--KSNGGKAKAYHVDISD 65

Query: 116 D--LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
           +  + +    IKE    +DV  L NN G+     R  HE    +   ++ V++ GT  +T
Sbjct: 66  EQQVKDFASEIKEQFGRVDV--LFNNAGVDNAAGRI-HEYPVDVFDKIMAVDMRGTFLMT 122

Query: 174 QAVLPGMLKRKKGAIVNIGS--GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           + +LP M++ + G+I+N  S  G A    +D   S Y A K  +  F++S+ +EY + GI
Sbjct: 123 KMLLPLMME-QGGSIINTSSFSGQA----ADLYRSGYNAAKGAVINFTKSIAIEYGRDGI 177

Query: 232 DV 233
             
Sbjct: 178 RA 179

Length = 272

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 75.8 bits (187), Expect = 2e-16
 Identities = 45/181 (24%), Positives = 88/181 (48%), Gaps = 5/181 (2%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYA-KTQIKSVVVDFS 114
           A+VTG + GIG + A  LA+ G ++ ++  +  + ++ ++ +  KY  KT+     V   
Sbjct: 11  AIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYKCDVSSQ 70

Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
             +++  ++I++    +D+  LI N GI+       +  +Q     +I VN+ G     Q
Sbjct: 71  ESVEKTFKQIQKDFGKIDI--LIANAGITVHKPALDYTYEQW--NKVIDVNLNGVFNCAQ 126

Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQ 234
           A      K+ KG+++   S +  ++      + Y A+KA +   ++SL VE+ K  I V 
Sbjct: 127 AAAKIFKKQGKGSLIITASMSGTIVNRPQPQAAYNASKAAVIHLAKSLAVEWAKYFIRVN 186

Query: 235 C 235
            
Sbjct: 187 S 187

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 75.6 bits (186), Expect = 3e-16
 Identities = 55/186 (29%), Positives = 83/186 (44%), Gaps = 13/186 (6%)

Query: 52  YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVV 111
            G  ALVTG   GIG++ A   A+ G  +V+  R+    ++    I+    +    +  V
Sbjct: 6   SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDV 65

Query: 112 DFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFH----EVDQVLLKNLIKVNVE 167
               ++   VE+   A   LD     NN GI     R       E D +     + VNV+
Sbjct: 66  TRDAEVKALVEQTIAAYGRLDYA--FNNAGIEIEQGRLAEGSEAEFDAI-----MGVNVK 118

Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
           G     +  +P ML +  GAIVN  S A +   + P  S+YAA+K  +   ++S  +EY 
Sbjct: 119 GVWLCMKYQIPLMLAQGGGAIVNTASVAGLG--AAPKMSIYAASKHAVIGLTKSAAIEYA 176

Query: 228 KSGIDV 233
           K GI V
Sbjct: 177 KKGIRV 182

Length = 253

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 75.6 bits (186), Expect = 3e-16
 Identities = 55/190 (28%), Positives = 90/190 (47%), Gaps = 16/190 (8%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG + G+G  FA  LA+ G  +VL  R  ++LK++   I+A+     + S+ V 
Sbjct: 9   GKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVT 68

Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
               +   V   +     +D  +L+NN G+S    +   +V       +   N  G   V
Sbjct: 69  DYQSIKAAVAHAETEAGTID--ILVNNSGVS--TTQKLVDVTPADFDFVFDTNTRGAFFV 124

Query: 173 TQAVLPGMLKRKKGA--------IVNIGSGAAI-VIPSDPLYSVYAATKAYIDQFSRSLY 223
            Q V   M+ R KGA        I+NI S A + V+P      +Y  +KA +   +R++ 
Sbjct: 125 AQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQ---IGLYCMSKAAVVHMTRAMA 181

Query: 224 VEYRKSGIDV 233
           +E+ + GI+V
Sbjct: 182 LEWGRHGINV 191

Length = 258

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 75.4 bits (186), Expect = 3e-16
 Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 18/179 (10%)

Query: 60  GPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDE 119
           GP  G+G++ A + A+ G ++VL  R  ++L +V+  I     +    +V  D +   DE
Sbjct: 14  GP--GLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRAL--AVPTDIT---DE 66

Query: 120 G-----VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
                 V    E    +D   L+NN     P  +   + D    + +I++NV GT ++TQ
Sbjct: 67  DQCANLVALALERFGRVD--ALVNN-AFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQ 123

Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           A  P  L    G+IV I S   ++  S P Y  Y   K  +   S+SL  E    GI V
Sbjct: 124 AFTPA-LAESGGSIVMINS--MVLRHSQPKYGAYKMAKGALLAASQSLATELGPQGIRV 179

Length = 258

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 75.4 bits (186), Expect = 4e-16
 Identities = 60/185 (32%), Positives = 92/185 (49%), Gaps = 26/185 (14%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVTG + GIGK+ A +LA  G  +    R  DK++D+        A   +  + +D + 
Sbjct: 6   ALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDL--------ASLGVHPLSLDVTD 57

Query: 116 D--LDEGVERIKEAIEGLDVGVLINNVGI-SYPYARFFHEVDQVLL---KNLIKVNVEGT 169
           +  +   V+ I      +DV  L+NN G  SY        ++ V +   +   +VN+ G 
Sbjct: 58  EASIKAAVDTIIAEEGRIDV--LVNNAGYGSY------GAIEDVPIDEARRQFEVNLFGA 109

Query: 170 TKVTQAVLPGMLKRKKGAIVNIGS-GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
            ++TQ VLP M  ++ G I+NI S G  I     PL + Y ATK  ++ FS +L +E   
Sbjct: 110 ARLTQLVLPHMRAQRSGRIINISSMGGKIY---TPLGAWYHATKFALEGFSDALRLEVAP 166

Query: 229 SGIDV 233
            GIDV
Sbjct: 167 FGIDV 171

Length = 273

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 74.8 bits (184), Expect = 4e-16
 Identities = 51/184 (27%), Positives = 75/184 (40%), Gaps = 15/184 (8%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVV 111
               LVTG   GIGK+F   L   G   V    R+P     +      K     +  + +
Sbjct: 3   DKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYGDK-----VVPLRL 57

Query: 112 DFSGDLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
           D +       E IK A     DV V+INN G+  P         + L + +  VNV G  
Sbjct: 58  DVTD-----PESIKAAAAQAKDVDVVINNAGVLKPATLLEEGALEALKQEM-DVNVFGLL 111

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
           ++ QA  P +     GAIVN+ S A++   + P    Y+A+K+     ++ L  E    G
Sbjct: 112 RLAQAFAPVLKANGGGAIVNLNSVASLK--NFPAMGTYSASKSAAYSLTQGLRAELAAQG 169

Query: 231 IDVQ 234
             V 
Sbjct: 170 TLVL 173

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 74.7 bits (184), Expect = 6e-16
 Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 19/186 (10%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  A+VTG   GIG + A   A  G  + L+ R+ D    V++ + A+      K +V D
Sbjct: 15  GKVAVVTGGASGIGHAIAELFAAKGARVALLDRSED----VAE-VAAQLLGGNAKGLVCD 69

Query: 113 FSGDLDE---GVERIKEAIEGLDVGVLINNVGISY--PYARFFHEVDQVLLKNLIKVNVE 167
            S D       V  +  A   +D+  L+N+ G++   P      +V +      I +N++
Sbjct: 70  VS-DSQSVEAAVAAVISAFGRIDI--LVNSAGVALLAPA----EDVSEEDWDKTIDINLK 122

Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
           G+  + QAV   M+    G IVN+ S A +V  +   +  Y A+KA +   ++ L +E+ 
Sbjct: 123 GSFLMAQAVGRHMIAAGGGKIVNLASQAGVV--ALERHVAYCASKAGVVGMTKVLALEWG 180

Query: 228 KSGIDV 233
             GI V
Sbjct: 181 PYGITV 186

Length = 255

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 74.7 bits (184), Expect = 6e-16
 Identities = 58/197 (29%), Positives = 88/197 (44%), Gaps = 30/197 (15%)

Query: 50  RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSV 109
           R  G  ALVTG   GIG + A   A+ G  + L   +    +  + +I    A  ++ +V
Sbjct: 4   RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAV 63

Query: 110 VVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGI---SYP-------YARFFHEVDQVL 157
             D +    +   V   +EA   LDV  L+NN GI   + P       + R F       
Sbjct: 64  PADVTDAASVAAAVAAAEEAFGPLDV--LVNNAGINVFADPLAMTDEDWRRCF------- 114

Query: 158 LKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAI-VIPSDPLYSVYAATKAYID 216
                 V+++G     +AVLPGM++R +G+IVNI S  A  +IP    Y V  A    + 
Sbjct: 115 -----AVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPV--AKHGLLG 167

Query: 217 QFSRSLYVEYRKSGIDV 233
             +R+L +EY    + V
Sbjct: 168 -LTRALGIEYAARNVRV 183

Length = 260

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 74.6 bits (184), Expect = 7e-16
 Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 12/178 (6%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           L+TG   G G+  A +LA+ G N++   +   ++  +    +A      ++   +D +  
Sbjct: 6   LITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRA--EAARRGLALRVEKLDLTDA 63

Query: 117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAV 176
           +D       +A E  DV VL+NN GI    A    ++   L++ L + NV G  ++TQ  
Sbjct: 64  ID-----RAQAAE-WDVDVLLNNAGIGEAGAVV--DIPVELVRELFETNVFGPLELTQGF 115

Query: 177 LPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQ 234
           +  M+ R KG +V   S A ++    P    Y A+K  ++  + +++ E +  GI V 
Sbjct: 116 VRKMVARGKGKVVFTSSMAGLITG--PFTGAYCASKHALEAIAEAMHAELKPFGIQVA 171

Length = 257

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 74.4 bits (183), Expect = 7e-16
 Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 11/182 (6%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           A+VTG   GIG++ A   A+ G  +V+  R+ +  + V+ +I A     +  +   D   
Sbjct: 8   AIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAG---GRAFARQGDVGS 64

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              ++  V+ +      LDV  L+NN G            D+     +++VNV G     
Sbjct: 65  AEAVEALVDFVAARWGRLDV--LVNNAGFGC--GGTVVTTDEADWDAVMRVNVGGVFLWA 120

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           +  +P M ++  G+IVN  S  A+        + Y A+K  I   +R++ +++   GI V
Sbjct: 121 KYAIPIMQRQGGGSIVNTASQLALA--GGRGRAAYVASKGAIASLTRAMALDHATDGIRV 178

Query: 234 QC 235
             
Sbjct: 179 NA 180

Length = 252

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 74.4 bits (183), Expect = 8e-16
 Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 26/195 (13%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKT-QIKSVVVDFS 114
           A++TG T  +G + A  LA+ G  +  +GRN +K   V+  I A   +   + + V+D  
Sbjct: 8   AVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAADVLDR- 66

Query: 115 GDLDEGVERIKEAIEGL--DVGVLINNVGISYPYA------------RFFHEVDQVLLKN 160
                 +ER +E I      V +LIN  G ++P A            + F ++D+   + 
Sbjct: 67  ----ASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGWEF 122

Query: 161 LIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV--YAATKAYIDQF 218
           +  +N+ G+   +Q     ML++K G+I+NI S  A      PL  V  Y+A KA +  F
Sbjct: 123 VFDLNLNGSFLPSQVFGKDMLEQKGGSIINISSMNAFS----PLTKVPAYSAAKAAVSNF 178

Query: 219 SRSLYVEYRKSGIDV 233
           ++ L VE+  +G+ V
Sbjct: 179 TQWLAVEFATTGVRV 193

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 74.0 bits (182), Expect = 8e-16
 Identities = 54/185 (29%), Positives = 80/185 (43%), Gaps = 22/185 (11%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G   LVTG + GIG++ A  LA+ G  +V   RN   L  ++        +T  + + +D
Sbjct: 9   GKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLA-------GETGCEPLRLD 61

Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISY---PYARFFHEVDQVLLKNLIKVNVEGT 169
                D  +     A    D   L+N  GI+             D+V+      VN  G 
Sbjct: 62  VGD--DAAIRAALAAAGAFD--GLVNCAGIASLESALDMTAEGFDRVM-----AVNARGA 112

Query: 170 TKVTQAVLPGMLK-RKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
             V + V   M+   + G+IVN+ S AA+V    P +  Y A+KA +D  +R L VE   
Sbjct: 113 ALVARHVARAMIAAGRGGSIVNVSSQAALV--GLPDHLAYCASKAALDAITRVLCVELGP 170

Query: 229 SGIDV 233
            GI V
Sbjct: 171 HGIRV 175

Length = 245

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 74.3 bits (183), Expect = 9e-16
 Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 6/179 (3%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           ++TG   G+G++ A + A+ G  L L   N +  ++    ++        +   V     
Sbjct: 4   MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQ 63

Query: 117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAV 176
           L    +  +E   G+DV  ++NN G++     FF E+        I +N+ G  K  +A 
Sbjct: 64  LTALAQACEEKWGGIDV--IVNNAGVAS--GGFFEELSLEDWDWQIAINLMGVVKGCKAF 119

Query: 177 LPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
           LP   ++K G IVNI S A ++    P  S Y   KA +   S +L VE     I V  
Sbjct: 120 LPLFKRQKSGRIVNIASMAGLMQG--PAMSSYNVAKAGVVALSETLLVELADDEIGVHV 176

Length = 270

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 73.9 bits (182), Expect = 1e-15
 Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 40/199 (20%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKS--VV 110
           G  AL+TG + GIG + A   AK G  +V    N + +    D   A Y +  I++   V
Sbjct: 10  GKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELV----DKGLAAYRELGIEAHGYV 65

Query: 111 VDFSG--DLDEGVERIKEAIEGLDVGVLINNVGI-------SYPYARFFHEVDQVLLKNL 161
            D +    +   V +I++ +  +D+  L+NN GI             F         + +
Sbjct: 66  CDVTDEDGVQAMVSQIEKEVGVIDI--LVNNAGIIKRIPMLEMSAEDF---------RQV 114

Query: 162 IKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGS-----GAAIVIPSDPLYSVYAATKAYID 216
           I +++     V++AV+P M+K+  G I+NI S     G   V       S YAA K  + 
Sbjct: 115 IDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETV-------SAYAAAKGGLK 167

Query: 217 QFSRSLYVEYRKSGIDVQC 235
             ++++  EY ++ I  QC
Sbjct: 168 MLTKNIASEYGEANI--QC 184

Length = 265

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 73.8 bits (182), Expect = 1e-15
 Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 11/150 (7%)

Query: 45  PAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI-QAKYAK 103
           P  +L K     LVTG  DGIG+  A   A+ G  ++L+GR  +KL+ V D I  A   +
Sbjct: 5   PKPDLLK-DRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQ 63

Query: 104 TQIKSVVVDFSG----DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK 159
             I  + +D       +  +  + I+E    LD GVL +N G+           D  + +
Sbjct: 64  PAI--IPLDLLTATPQNYQQLADTIEEQFGRLD-GVL-HNAGLLGELGPMEQ-QDPEVWQ 118

Query: 160 NLIKVNVEGTTKVTQAVLPGMLKRKKGAIV 189
           ++++VNV  T  +TQA+LP +LK    ++V
Sbjct: 119 DVMQVNVNATFMLTQALLPLLLKSPAASLV 148

Length = 247

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 73.7 bits (181), Expect = 1e-15
 Identities = 58/183 (31%), Positives = 93/183 (50%), Gaps = 12/183 (6%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G   +VTG   GIG+  A +LA  G  ++LV R+ + + +V   I A  A         D
Sbjct: 4   GKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRS-ELVHEVLAEILA--AGDAAHVHTAD 60

Query: 113 FSGDLD-EGVERIKEAIEGLD-VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
                  +GV  ++ A+E    V VLINNVG +  +A+ +   ++  ++  I+ ++  T 
Sbjct: 61  LETYAGAQGV--VRAAVERFGRVDVLINNVGGTI-WAKPYEHYEEEQIEAEIRRSLFPTL 117

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
              +AVLP ML+R++G IVN+ S A   I   P    Y+A K  ++  + SL  E+ + G
Sbjct: 118 WCCRAVLPHMLERQQGVIVNVSSIATRGIYRIP----YSAAKGGVNALTASLAFEHARDG 173

Query: 231 IDV 233
           I V
Sbjct: 174 IRV 176

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 72.8 bits (179), Expect = 2e-15
 Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 30/201 (14%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-----NPDKLKDVSDSIQAKYAKTQIK 107
           G  A VTG + GIG++ A +LAK G  +V+  +     +    K +  +I+    + +  
Sbjct: 3   GKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEAA 62

Query: 108 -----SVVVDFSGDLDEGVERIKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLK 159
                 +VVD   D D+    ++  ++    LD  +L+NN G     A +   V+    K
Sbjct: 63  GGQALPIVVDVR-DEDQVRALVEATVDQFGRLD--ILVNNAG-----AIWLSLVEDTPAK 114

Query: 160 N---LIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY--SVYAATKAY 214
               + +VN+ GT  ++QA LP M+K  +G I+NI       +   P      YAA KA 
Sbjct: 115 RFDLMQRVNLRGTYLLSQAALPHMVKAGQGHILNISP----PLSLRPARGDVAYAAGKAG 170

Query: 215 IDQFSRSLYVEYRKSGIDVQC 235
           + + +  L  E R+ GI V  
Sbjct: 171 MSRLTLGLAAELRRHGIAVNS 191

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 72.9 bits (179), Expect = 2e-15
 Identities = 49/181 (27%), Positives = 76/181 (41%), Gaps = 8/181 (4%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G    +TG   G+G++ A  LA  G  + L+GR    L      + A   +     +V  
Sbjct: 7   GKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDP 66

Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
                   V+ +      LD   L+N  G  + +     + D      +  VNV+ T   
Sbjct: 67  --QAARRAVDEVNRQFGRLDA--LVNIAGA-FVWGTI-ADGDADTWDRMYGVNVKTTLNA 120

Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
           ++A LP +     G IVNIG+GAA+   + P    YAA KA + + + +L  E    GI 
Sbjct: 121 SKAALPALTASGGGRIVNIGAGAALK--AGPGMGAYAAAKAGVARLTEALAAELLDRGIT 178

Query: 233 V 233
           V
Sbjct: 179 V 179

Length = 239

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 72.1 bits (177), Expect = 3e-15
 Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 35/186 (18%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            LVTG T GIG + + +LA  G  ++ + R+                         DF G
Sbjct: 6   VLVTGATKGIGLALSLRLANLGHQVIGIARSAID----------------------DFPG 43

Query: 116 DL------DEG--VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVE 167
           +L      D       + +  E   V  ++NNVGI+ P      ++D   L+++  +NV 
Sbjct: 44  ELFACDLADIEQTAATLAQINEIHPVDAIVNNVGIALPQP--LGKIDLAALQDVYDLNVR 101

Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
              +VTQA L GM  R++G IVNI S A   I      + Y+A K+ +   +R+  +E  
Sbjct: 102 AAVQVTQAFLEGMKLREQGRIVNICSRA---IFGALDRTSYSAAKSALVGCTRTWALELA 158

Query: 228 KSGIDV 233
           + GI V
Sbjct: 159 EYGITV 164

Length = 234

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 72.4 bits (178), Expect = 4e-15
 Identities = 51/181 (28%), Positives = 75/181 (41%), Gaps = 7/181 (3%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL-KDVSDSIQAKYAKTQIKSVVVDFS 114
           ALVTG + GIGK+ A +LA+ G ++V+  R       +V+  I+    K  +    V   
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADVSQP 60

Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
            D++E    +KE    LD  VL++N        R   E+        +  N++      Q
Sbjct: 61  QDVEEMFAAVKERFGRLD--VLVSNAAAG--AFRPLSELTPAHWDAKMNTNLKALVHCAQ 116

Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQ 234
                M +R  G IV I S  +I     P Y      KA ++   R L VE    GI V 
Sbjct: 117 QAAKLMRERGGGRIVAISSLGSIRAL--PNYLAVGTAKAALEALVRYLAVELGPRGIRVN 174

Query: 235 C 235
            
Sbjct: 175 A 175

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 72.1 bits (177), Expect = 4e-15
 Identities = 50/188 (26%), Positives = 76/188 (40%), Gaps = 25/188 (13%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           ALVTG   GIG +   +LAK G  +    G N ++ +       A       + V  D S
Sbjct: 3   ALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL--GFDFRVVEGDVS 60

Query: 115 GDLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              +     + +    L  + VL+NN GI+      F ++       +I  N+     VT
Sbjct: 61  -SFESCKAAVAKVEAELGPIDVLVNNAGITRD--ATFKKMTYEQWSAVIDTNLNSVFNVT 117

Query: 174 QAVLPGMLKRKKGAIVNIGS--------GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
           Q V+ GM +R  G I+NI S        G             Y+A KA +  F+++L  E
Sbjct: 118 QPVIDGMRERGWGRIINISSVNGQKGQFGQT----------NYSAAKAGMIGFTKALAQE 167

Query: 226 YRKSGIDV 233
               G+ V
Sbjct: 168 GATKGVTV 175

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 72.0 bits (177), Expect = 4e-15
 Identities = 57/187 (30%), Positives = 88/187 (47%), Gaps = 12/187 (6%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVV 111
           G  ALVTG + GIGK+ A +LA  G N+V+  R   D  ++V + I+A   K    +V  
Sbjct: 3   GKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAI--AVQA 60

Query: 112 DFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
           D S   D+    +   +    LD  +L+NN G+    +   HE+       +I VN+ G 
Sbjct: 61  DVSKEEDVVALFQSAIKEFGTLD--ILVNNAGLQGDAS--SHEMTLEDWNKVIDVNLTGQ 116

Query: 170 TKVTQAVLPGMLK-RKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
               +  +    K + KG I+N+ S     IP  P +  YAA+K  +   +++L  EY  
Sbjct: 117 FLCAREAIKRFRKSKIKGKIINMSS-VHEKIPW-PGHVNYAASKGGVKMMTKTLAQEYAP 174

Query: 229 SGIDVQC 235
            GI V  
Sbjct: 175 KGIRVNA 181

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 72.1 bits (177), Expect = 5e-15
 Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 34/186 (18%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G   LVTG + GIG+  A    + G  +++  R  +   D ++ + + Y +    ++  D
Sbjct: 6   GKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEEL-SAYGECI--AIPAD 62

Query: 113 FSGDLDEGVE----RIKEAIEGLDVGVLINNVGIS-------YPYARFFHEVDQVLLKNL 161
            S   +EG+E    R+ E  + LD  VL+NN G +       +P + +    D+V+    
Sbjct: 63  LSS--EEGIEALVARVAERSDRLD--VLVNNAGATWGAPLEAFPESGW----DKVM---- 110

Query: 162 IKVNVEGTTKVTQAVLPGMLKRKKGA-----IVNIGSGAAIVIPSDPLYSVYAATKAYID 216
             +NV+    +TQA+LP +L+    A     ++NIGS A IV+     YS Y A+KA + 
Sbjct: 111 -DINVKSVFFLTQALLP-LLRAAATAENPARVINIGSIAGIVVSGLENYS-YGASKAAVH 167

Query: 217 QFSRSL 222
           Q +R L
Sbjct: 168 QLTRKL 173

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 72.3 bits (178), Expect = 5e-15
 Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 29/195 (14%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG + G+G   A  L + G  +VL  R  ++L++      A      I ++   
Sbjct: 12  GKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEA----AAHLEALGIDALW-- 65

Query: 113 FSGDL--DEGVERI-KEAIEGL-DVGVLINNVGIS-------YPYARFFHEVDQVLLKNL 161
            + D+  +  +ER+ +E +E    V +L+NN G +       +P   +    D+V     
Sbjct: 66  IAADVADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAW----DKV----- 116

Query: 162 IKVNVEGTTKVTQAVLP-GMLKRKKGAIVNIGSGAAIV-IPSDPLYSV-YAATKAYIDQF 218
           + +NV G   ++QAV    M+ R  G I+N+ S A +   P + + ++ Y  +K  +  F
Sbjct: 117 MNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINF 176

Query: 219 SRSLYVEYRKSGIDV 233
           +R+L  E+   GI V
Sbjct: 177 TRALAAEWGPHGIRV 191

Length = 259

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 71.7 bits (176), Expect = 6e-15
 Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 11/181 (6%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           ALVTG   GIGK  A +LAK G  + +   N +  K+ +  I       +  +  +D S 
Sbjct: 3   ALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA--GGKAVAYKLDVSD 60

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              +   +++  E   G D  V++NN G++        E+ +  LK +  VNV+G     
Sbjct: 61  KDQVFSAIDQAAEKFGGFD--VMVNNAGVA--PITPILEITEEELKKVYNVNVKGVLFGI 116

Query: 174 QAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
           QA      K+   G I+N  S A      +P+ S Y++TK  +   +++   E    GI 
Sbjct: 117 QAAARQFKKQGHGGKIINAASIAGHE--GNPILSAYSSTKFAVRGLTQTAAQELAPKGIT 174

Query: 233 V 233
           V
Sbjct: 175 V 175

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 71.7 bits (176), Expect = 6e-15
 Identities = 53/190 (27%), Positives = 84/190 (44%), Gaps = 22/190 (11%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVV 111
           G  ALVTG T GIG   A  LA  G N+VL G  +  +++ V   + AK+        V+
Sbjct: 2   GKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVK-----VL 56

Query: 112 DFSGDLDEG------VERIKEAIEGLDVGVLINNVGISY--PYARFFHEVDQVLLKNLIK 163
               DL +       V   +    G+D  +L+NN GI +  P   F    ++     +I 
Sbjct: 57  YHGADLSKPAAIEDMVAYAQRQFGGVD--ILVNNAGIQHVAPIEDF--PTEK--WDAIIA 110

Query: 164 VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
           +N+      T+  LP M K+  G I+NI S   +V  +    S Y A K  +   ++ + 
Sbjct: 111 LNLSAVFHTTRLALPHMKKQGWGRIINIASVHGLV--ASANKSAYVAAKHGVVGLTKVVA 168

Query: 224 VEYRKSGIDV 233
           +E   +G+  
Sbjct: 169 LETAGTGVTC 178

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 72.0 bits (177), Expect = 7e-15
 Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 24/186 (12%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           +VTG + GIG +   +L   G N+V    +    +   ++ Q  +  T + S     + +
Sbjct: 13  IVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH--ENYQ--FVPTDVSS-----AEE 63

Query: 117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFF---------HEVDQVLLKNLIKVNVE 167
           ++  V  I E    +D   L+NN GI+ P  R           +E+++     +  +N +
Sbjct: 64  VNHTVAEIIEKFGRIDG--LVNNAGINIP--RLLVDEKDPAGKYELNEAAFDKMFNINQK 119

Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
           G   ++QAV   M+K+  G IVN+ S A   +      S YAATKA ++ F+RS   E  
Sbjct: 120 GVFLMSQAVARQMVKQHDGVIVNMSSEAG--LEGSEGQSCYAATKAALNSFTRSWAKELG 177

Query: 228 KSGIDV 233
           K  I V
Sbjct: 178 KHNIRV 183

Length = 266

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 71.5 bits (176), Expect = 7e-15
 Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 19/163 (11%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVV 111
           G   LVTG   GIG++F  QL   G   V    R+P+ + D+   +           + +
Sbjct: 6   GKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDLGPRVVP---------LQL 56

Query: 112 DFSGDLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
           D +         +  A E   DV +L+NN GI    +    E D+  L+  ++ N  G  
Sbjct: 57  DVTDP-----ASVAAAAEAASDVTILVNNAGIFRTGS-LLLEGDEDALRAEMETNYFGPL 110

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKA 213
            + +A  P +     GAIVN+ S  + V  + P    Y+A+KA
Sbjct: 111 AMARAFAPVLAANGGGAIVNVLSVLSWV--NFPNLGTYSASKA 151

Length = 238

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 71.2 bits (175), Expect = 7e-15
 Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 16/181 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVTG + GIG   A  LA+ G  + L  RNP+ L           +   +++V  D   
Sbjct: 3   ALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLA------ALSASGGDVEAVPYDARD 56

Query: 116 DLDEG--VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
             D    V+ +++    +D  VL++N GI  P      E     L+    +NV    ++T
Sbjct: 57  PEDARALVDALRDRFGRID--VLVHNAGIGRPTT--LREGSDAELEAHFSINVIAPAELT 112

Query: 174 QAVLPGMLKRKKGAIVNIGSGAA-IVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
           +A+LP + +   G +V + S +   V+  +   + Y+A+K  +   + +L  E    G+ 
Sbjct: 113 RALLPALREAGSGRVVFLNSLSGKRVLAGN---AGYSASKFALRALAHALRQEGWDHGVR 169

Query: 233 V 233
           V
Sbjct: 170 V 170

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 71.9 bits (177), Expect = 7e-15
 Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 13/179 (7%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS-- 114
           L+TG + G G++ A      G  +V   R+     D            +  + ++D +  
Sbjct: 8   LITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADF-----EALHPDRALARLLDVTDF 62

Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
             +D  V   +     +DV  L+NN G  +  A    E     ++   +VNV G   +T+
Sbjct: 63  DAIDAVVADAEATFGPIDV--LVNNAGYGHEGA--IEESPLAEMRRQFEVNVFGAVAMTK 118

Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           AVLPGM  R++G IVNI S   ++  + P    Y  +K  ++  S SL  E    GI V
Sbjct: 119 AVLPGMRARRRGHIVNITSMGGLI--TMPGIGYYCGSKFALEGISESLAKEVAPFGIHV 175

Length = 277

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 71.4 bits (175), Expect = 1e-14
 Identities = 61/182 (33%), Positives = 88/182 (48%), Gaps = 12/182 (6%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNL-VLVGRNPDKLKDVSDSIQAKYAKTQIKSVVV 111
           G  AL+TG T GIG++ A    + G  + VL     ++ K++    + K   T IK  V 
Sbjct: 7   GKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKEL----REKGVFT-IKCDVG 61

Query: 112 DFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
           +    + +  E +++    +DV  L+NN GI Y     F E D+     +IK+N+ G   
Sbjct: 62  N-RDQVKKSKEVVEKEFGRVDV--LVNNAGIMYLMP--FEEFDEEKYNKMIKINLNGAIY 116

Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
            T   LP +   K GAIVNI S A I   ++   + YA TKA I   +R L  E  K GI
Sbjct: 117 TTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGT-TFYAITKAGIIILTRRLAFELGKYGI 175

Query: 232 DV 233
            V
Sbjct: 176 RV 177

Length = 255

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 70.3 bits (172), Expect = 2e-14
 Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 7/179 (3%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKT-QIKSVVVDFS 114
           A+VTG   GIGK+ A  LAK G ++V+     +  + V+ +IQ    +   ++  V    
Sbjct: 2   AIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSEQ 61

Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
            DL+  V+       G+   +L+NN G   P   F   + +   +   K+N+    +++Q
Sbjct: 62  -DLEAVVKATVSQFGGIT--ILVNNAGGGGPK-PFDMPMTEEDFEWAFKLNLFSAFRLSQ 117

Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
              P M K   GAI+NI S ++     +   + Y ++KA ++  +R+L  +    GI V
Sbjct: 118 LCAPHMQKAGGGAILNISSMSSEN--KNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRV 174

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 69.9 bits (171), Expect = 2e-14
 Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 20/188 (10%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           LVTG +DGIG+  A   A+ G  ++L+GRN +KL+ V+D I  +    Q +  ++D    
Sbjct: 8   LVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEE-GGRQPQWFILDLLTC 66

Query: 117 LDEGVERIKEAIEG----LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
             E  +++ + I      LD GVL +N G+         +  QV  +++ +VNV  T  +
Sbjct: 67  TSENCQQLAQRIAVNYPRLD-GVL-HNAGLLGDVCPLSEQNPQV-WQDVXQVNVNATFML 123

Query: 173 TQAVLPGMLKRKKGAIVNIGS-----GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
           TQA+LP +LK   G++V   S     G A        +  YA +K   +   + L  EY+
Sbjct: 124 TQALLPLLLKSDAGSLVFTSSSVGRQGRA-------NWGAYAVSKFATEGLXQVLADEYQ 176

Query: 228 KSGIDVQC 235
           +  + V C
Sbjct: 177 QRNLRVNC 184

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 70.4 bits (173), Expect = 3e-14
 Identities = 52/195 (26%), Positives = 79/195 (40%), Gaps = 16/195 (8%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  A++TG   G G +FA   A  G+ LVL     D L      ++A+ A  ++  V  D
Sbjct: 6   GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGA--EVLGVRTD 63

Query: 113 FSGDLDEGVERI-KEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
            S      VE +   A+E    V +L NN G+         E      + ++ VN+ G  
Sbjct: 64  VS--DAAQVEALADAALERFGAVHLLFNNAGVG--AGGLVWENSLADWEWVLGVNLWGVI 119

Query: 171 KVTQAVLPGMLKRKK------GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYV 224
              +A  P ML   +      G IVN  S A ++ P  P   +Y  +K  +   + +LY 
Sbjct: 120 HGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP--PAMGIYNVSKHAVVSLTETLYQ 177

Query: 225 EYRKSGIDVQCQVLF 239
           +       V   VL 
Sbjct: 178 DLSLVTDQVGASVLC 192

Length = 287

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 71.4 bits (176), Expect = 3e-14
 Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 12/181 (6%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           ALVTG   GIGK+ A +LA  G  +VL   + +  +  +  +       +   V  D + 
Sbjct: 425 ALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELG---GPDRALGVACDVTD 481

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              +    E    A  G+D  ++++N GI+          D+   ++   VN  G   V 
Sbjct: 482 EAAVQAAFEEAALAFGGVD--IVVSNAGIAIS-GPIEETSDEDWRRSF-DVNATGHFLVA 537

Query: 174 QAVLPGMLKRKKG-AIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
           +  +  M  +  G +IV I S  A+  P  P +  Y A KA      R L +E    GI 
Sbjct: 538 REAVRIMKAQGLGGSIVFIASKNAVN-PG-PNFGAYGAAKAAELHLVRQLALELGPDGIR 595

Query: 233 V 233
           V
Sbjct: 596 V 596

Length = 681

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 69.8 bits (171), Expect = 3e-14
 Identities = 55/191 (28%), Positives = 86/191 (45%), Gaps = 18/191 (9%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAKYAKTQIKSVVV 111
           G  ALVTG + GIG+  A QL + G  + + GR    +L   ++ I+A+  K     V  
Sbjct: 3   GKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCI--PVRC 60

Query: 112 DFSGDLD--EGVERIKEAIEG-LDVGVLINNV-----GISYPYARFFHEVDQVLLKNLIK 163
           D S D +     ER+    +G LD  +L+NN       I    A+ F E    +  ++  
Sbjct: 61  DHSDDDEVEALFERVAREQQGRLD--ILVNNAYAAVQLILVGVAKPFWEEPPTIWDDINN 118

Query: 164 VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV-YAATKAYIDQFSRSL 222
           V +      +    P M+K  KG IV I S   +    + L++V Y   KA ID+ +  +
Sbjct: 119 VGLRAHYACSVYAAPLMVKAGKGLIVIISSTGGL----EYLFNVAYGVGKAAIDRMAADM 174

Query: 223 YVEYRKSGIDV 233
             E +  G+ V
Sbjct: 175 AHELKPHGVAV 185

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 69.4 bits (170), Expect = 4e-14
 Identities = 50/182 (27%), Positives = 77/182 (42%), Gaps = 15/182 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            +VTG   GIG++ A  L + G  ++ +      L +  D ++           V D + 
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRLT------PLDVAD-AA 53

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
            + E   R+      +D   L+N  G+  P A     +     +    VNV G   + QA
Sbjct: 54  AVREVCSRLLAEHGPIDA--LVNCAGVLRPGA--TDPLSTEDWEQTFAVNVTGVFNLLQA 109

Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
           V P M  R+ GAIV + S AA V       + Y A+KA +   S+ L +E    G  V+C
Sbjct: 110 VAPHMKDRRTGAIVTVASNAAHVPRIS--MAAYGASKAALASLSKCLGLELAPYG--VRC 165

Query: 236 QV 237
            V
Sbjct: 166 NV 167

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 69.0 bits (169), Expect = 6e-14
 Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 18/184 (9%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A+VTG   GIG+++A  LA+ G ++V+   N +  + V+  I A        +V VD S 
Sbjct: 9   AIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGG--TAIAVQVDVS- 65

Query: 116 DLDEG---VERIKEAIEGLDVGVLINNVGISYPYAR--FFHEVDQVLLKNLIKVNVEGTT 170
           D D      +    A  G+D   L+NN  I Y   +      V     K  + VN++G  
Sbjct: 66  DPDSAKAMADATVSAFGGIDY--LVNNAAI-YGGMKLDLLITVPWDYYKKFMSVNLDGAL 122

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS-VYAATKAYIDQFSRSLYVEYRKS 229
             T+AV   M KR  GAIVN  S AA       LYS  Y   K  ++  ++ L  E    
Sbjct: 123 VCTRAVYKHMAKRGGGAIVNQSSTAAW------LYSNFYGLAKVGLNGLTQQLARELGGM 176

Query: 230 GIDV 233
            I V
Sbjct: 177 NIRV 180

Length = 250

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 69.0 bits (169), Expect = 7e-14
 Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 18/185 (9%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI--QAKYAKTQIKSVVVDF 113
           A+VTG   G G+  A + A+ G  +V+   N D  + V+  I   A   +  +       
Sbjct: 8   AIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIGEAAIAIQADVTK----- 62

Query: 114 SGDLDEGVERIKEAIEGLDVGVLINNVGISY---PYARFFHEVDQVLLKNLIKVNVEGTT 170
             D++  VE        LD+  L+NN GI++   P      EVD+     +  VNV+   
Sbjct: 63  RADVEAMVEAALSKFGRLDI--LVNNAGITHRNKPML----EVDEEEFDRVFAVNVKSIY 116

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
              QA++P M ++  G I+NI S A   +   P  + Y A+K ++   ++++ VE     
Sbjct: 117 LSAQALVPHMEEQGGGVIINIASTAG--LRPRPGLTWYNASKGWVVTATKAMAVELAPRN 174

Query: 231 IDVQC 235
           I V C
Sbjct: 175 IRVNC 179

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 69.1 bits (169), Expect = 7e-14
 Identities = 55/182 (30%), Positives = 91/182 (50%), Gaps = 12/182 (6%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVTG T GIG + A +L K GL + +  R  + L      ++    +   ++  V    
Sbjct: 6   ALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRTCDVRSVP 65

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
           +++  V         +D  VL+NN G S   A    E+   L  ++++ N+ G  +VT+ 
Sbjct: 66  EIEALVAAAVARYGPID--VLVNNAGRSGGGA--TAELADELWLDVVETNLTGVFRVTKE 121

Query: 176 VLP--GMLKRKKGAIVNIGS--GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           VL   GML+R  G I+NI S  G   V+ + P    Y+A+K  +  F+++L +E  ++GI
Sbjct: 122 VLKAGGMLERGTGRIINIASTGGKQGVVHAAP----YSASKHGVVGFTKALGLELARTGI 177

Query: 232 DV 233
            V
Sbjct: 178 TV 179

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 68.5 bits (168), Expect = 7e-14
 Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 32/195 (16%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  AL+TG + GIG + A  L   G  + +  R+  +L++ +  +  K     + + V D
Sbjct: 6   GKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRD 65

Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLL---KNLIKVNVEGT 169
              D+   V+ I  A  GLD  VLI N G+ +     F  V+++     + +I  N+ G 
Sbjct: 66  E-ADVQRAVDAIVAAFGGLD--VLIANAGVGH-----FAPVEELTPEEWRLVIDTNLTGA 117

Query: 170 TKVTQAVLPGMLKRKKGAIVNIGS---------GAAIVIPSDPLYSVYAATKAYIDQFSR 220
               +A +P  LKR  G I+NI S         GAA           Y A+K  +  FS 
Sbjct: 118 FYTIKAAVPA-LKRGGGYIINISSLAGTNFFAGGAA-----------YNASKFGLVGFSE 165

Query: 221 SLYVEYRKSGIDVQC 235
           +  ++ R+ GI V  
Sbjct: 166 AAMLDLRQYGIKVST 180

Length = 237

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 68.2 bits (167), Expect = 1e-13
 Identities = 47/183 (25%), Positives = 89/183 (48%), Gaps = 9/183 (4%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK-LKDVSDSIQAKYAKTQIKSVVVDFS 114
           A +TG   G+G++ A ++A+ G  + L   N    L   +  I A + +    + V D +
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVT 61

Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
                   + +  +A+ GL V  L+NN G+    A    +++    + ++ +NVE     
Sbjct: 62  DEAQWQALLAQAADAMGGLSV--LVNNAGVGSFGA--IEQIELDEWRRVMAINVESIFLG 117

Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
            +  LP +   +  +IVNI S AA     +P Y+ Y A+KA +   ++S+ ++  + G+D
Sbjct: 118 CKHALPYLRASQPASIVNISSVAAFKA--EPDYTAYNASKAAVASLTKSIALDCARRGLD 175

Query: 233 VQC 235
           V+C
Sbjct: 176 VRC 178

Length = 251

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 68.3 bits (167), Expect = 1e-13
 Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 12/186 (6%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI---QAKYAKTQIKSV 109
           G  A++TG   GIG++ A   AK G  +V+   + D  + V+  +      +    + +V
Sbjct: 4   GKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAELGDPDISFVHCDV-TV 62

Query: 110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
             D    +D  V R       LD+  + NN G+         E      + ++ VNV G 
Sbjct: 63  EADVRAAVDTAVARFGR----LDI--MFNNAGVLGAPCYSILETSLEEFERVLDVNVYGA 116

Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
              T+     M+  KKG+IV++ S A +V    P    Y A+K  +   +RS   E  + 
Sbjct: 117 FLGTKHAARVMIPAKKGSIVSVASVAGVVGGLGP--HAYTASKHAVLGLTRSAATELGEH 174

Query: 230 GIDVQC 235
           GI V C
Sbjct: 175 GIRVNC 180

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 68.3 bits (167), Expect = 1e-13
 Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 17/180 (9%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            L+TG + GIG++ A      G  +    R  +   DV     A +   Q+    V+   
Sbjct: 4   VLITGCSSGIGRALADAFKAAGYEVWATARKAE---DVEALAAAGFTAVQLD---VNDGA 57

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
            L    E ++    GLDV  LINN G     P      E     ++   + NV     VT
Sbjct: 58  ALARLAEELEAEHGGLDV--LINNAGYGAMGPLLDGGVEA----MRRQFETNVFAVVGVT 111

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           +A+ P +L+R +G +VNIGS + +++   P    Y A+KA +   S +L +E    G+ V
Sbjct: 112 RALFP-LLRRSRGLVVNIGSVSGVLV--TPFAGAYCASKAAVHALSDALRLELAPFGVQV 168

Length = 274

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 68.0 bits (167), Expect = 1e-13
 Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 30/187 (16%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           ALVTG T GIG +   +L + G  +V   R+ PD L +  + + A               
Sbjct: 12  ALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLPEGVEFVAA--------------- 56

Query: 115 GDLD--EGVERI-KEAIEGL-DVGVLINNVGISYPYARFFHEV-DQVLLKNLIKVNVEGT 169
            DL   EG   + +  +E L  V +L++ +G S   A  F  + D+     L  +N+   
Sbjct: 57  -DLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDEL-NLNLLAA 114

Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV---YAATKAYIDQFSRSLYVEY 226
            ++ +A+LPGM+ R  G I+++ S    +    PL      YAA KA +  +S+SL  E 
Sbjct: 115 VRLDRALLPGMIARGSGVIIHVTSIQRRL----PLPESTTAYAAAKAALSTYSKSLSKEV 170

Query: 227 RKSGIDV 233
              G+ V
Sbjct: 171 APKGVRV 177

Length = 260

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 68.2 bits (167), Expect = 2e-13
 Identities = 49/177 (27%), Positives = 93/177 (52%), Gaps = 8/177 (4%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALV G + GIG + A +LA  G  + L  R  +K +++ D I+A     +  +  +D + 
Sbjct: 13  ALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRA--DGGEAVAFPLDVT- 69

Query: 116 DLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
           D D     + +A E L ++ VL++  G +Y      HE+     ++ +++++ G  ++  
Sbjct: 70  DPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGK--LHEISTEQFESQVQIHLVGANRLAT 127

Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           AVLPGM++R++G ++ +GS  A+     P    Y A KA ++    +L +E   +G+
Sbjct: 128 AVLPGMIERRRGDLIFVGSDVALR--QRPHMGAYGAAKAGLEAMVTNLQMELEGTGV 182

Length = 274

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 67.7 bits (166), Expect = 2e-13
 Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 14/187 (7%)

Query: 50  RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSV 109
           R  G  AL+TG   GIG++ A +    G  +V+    P + +  +  I          +V
Sbjct: 3   RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGP-----AAIAV 57

Query: 110 VVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVE 167
            +D +    +D  V    E   G+D  +L NN  + +  A    ++ +     L  VNV+
Sbjct: 58  SLDVTRQDSIDRIVAAAVERFGGID--ILFNNAAL-FDMAPIL-DISRDSYDRLFAVNVK 113

Query: 168 GTTKVTQAVLPGMLKRKKGA-IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
           G   + QAV   M+++ +G  I+N+ S A      + L S Y ATKA +  +++S  +  
Sbjct: 114 GLFFLMQAVARHMVEQGRGGKIINMASQAG--RRGEALVSHYCATKAAVISYTQSAALAL 171

Query: 227 RKSGIDV 233
            + GI+V
Sbjct: 172 IRHGINV 178

Length = 257

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 67.3 bits (165), Expect = 3e-13
 Identities = 50/190 (26%), Positives = 79/190 (41%), Gaps = 29/190 (15%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI--QAKYAKTQIKSVV 110
           G  A+VTG    IG + A  L   G  + +V  + D    V+ S+  +A++  T I    
Sbjct: 6   GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITD-- 63

Query: 111 VDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVL-------LKNLIK 163
                 ++  V  +      +D  +L+N    +Y        +D  L       L  L  
Sbjct: 64  ---DAAIERAVATVVARFGRVD--ILVNL-ACTY--------LDDGLASSRADWLAAL-D 108

Query: 164 VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
           VN+     + QA  P +  R  GAIVN  S +A    +     +Y A+KA I Q +RS+ 
Sbjct: 109 VNLVSAAMLAQAAHPHL-ARGGGAIVNFTSISAKFAQTGRW--LYPASKAAIRQLTRSMA 165

Query: 224 VEYRKSGIDV 233
           ++    GI V
Sbjct: 166 MDLAPDGIRV 175

Length = 261

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 67.1 bits (164), Expect = 3e-13
 Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 16/187 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
            LVTG + G+G + A   A+ G  +V+   R+ +  + V+     +     I++ V D  
Sbjct: 3   VLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGER--AIAIQADVRDRD 60

Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPY----ARFFHEVDQVLLKNLIKVNVEGTT 170
             +   +E  K     +D   ++NN  I +P+     + F  +D    +  ++  V+G  
Sbjct: 61  -QVQAMIEEAKNHFGPVDT--IVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGAL 117

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAI--VIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
            + QAVLP   +R  G ++NIG+      V+P    Y  Y   KA +  F+R++  E   
Sbjct: 118 NLLQAVLPDFKERGSGRVINIGTNLFQNPVVP----YHDYTTAKAALLGFTRNMAKELGP 173

Query: 229 SGIDVQC 235
            GI V  
Sbjct: 174 YGITVNM 180

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 66.3 bits (162), Expect = 4e-13
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 17/183 (9%)

Query: 58  VTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVV--VDFSG 115
           +TG   GIG+  A   A+ G  + L   + D L  ++  + A+        V     ++ 
Sbjct: 5   ITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAENVVAGALDVTDRAAWAA 64

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARF--FHEVDQVLLKNLIKVNVEGTTKVT 173
            L +          G  +  L NN G+     R   F +V       ++ +NV+G     
Sbjct: 65  ALADFAAA-----TGGRLDALFNNAGV----GRGGPFEDVPLAAHDRMVDINVKGVLNGA 115

Query: 174 QAVLPGMLKRKKGA-IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
            A LP  LK   GA ++N  S +AI     P  +VY+ATK  +   + +L VE+ + GI 
Sbjct: 116 YAALP-YLKATPGARVINTASSSAIY--GQPDLAVYSATKFAVRGLTEALDVEWARHGIR 172

Query: 233 VQC 235
           V  
Sbjct: 173 VAD 175

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 66.6 bits (163), Expect = 5e-13
 Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 14/181 (7%)

Query: 55  WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           W  +TG + G G+++     + G  +V   R+   L D+++    +     +   V D +
Sbjct: 6   W-FITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALD--VTDRA 62

Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARF--FHEVDQVLLKNLIKVNVEGTTKV 172
                 VE   E    LD+  ++NN G    Y  F    EV +   +  I  N  G   V
Sbjct: 63  AVFA-AVETAVEHFGRLDI--VVNNAG----YGLFGMIEEVTESEARAQIDTNFFGALWV 115

Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
           TQAVLP + +++ G I+ I S   I   + P+  +Y A+K  ++  S +L  E  + GI 
Sbjct: 116 TQAVLPYLREQRSGHIIQISSIGGIS--AFPMSGIYHASKWALEGMSEALAQEVAEFGIK 173

Query: 233 V 233
           V
Sbjct: 174 V 174

Length = 275

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 66.1 bits (162), Expect = 6e-13
 Identities = 44/188 (23%), Positives = 73/188 (38%), Gaps = 33/188 (17%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAK-----TGLNLVLVGRNPDKLK----DVSDSIQAKYAK 103
           G    VTG   GIG + A    +      G +   + +          DVSD+       
Sbjct: 8   GKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQEDYPFATFVLDVSDAAA----- 62

Query: 104 TQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIK 163
                        + +  +R+      LDV  L+N  GI    A     +     +    
Sbjct: 63  -------------VAQVCQRLLAETGPLDV--LVNAAGILRMGA--TDSLSDEDWQQTFA 105

Query: 164 VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
           VN  G   + +AV+P   +++ GAIV +GS AA V P   + + Y A+KA +   ++ + 
Sbjct: 106 VNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHV-PRIGM-AAYGASKAALTSLAKCVG 163

Query: 224 VEYRKSGI 231
           +E    G+
Sbjct: 164 LELAPYGV 171

Length = 252

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 67.2 bits (164), Expect = 7e-13
 Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 16/181 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
             +TG   GIG++ A + A  G  L+++ R+ +  K +++++  ++      SV  D + 
Sbjct: 272 VAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHL-----SVQADIT- 325

Query: 116 DLDEG-VERIKEAIEGL--DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
             DE  VE     I+     + VL+NN GI+  +     +  +     +  VN+ G    
Sbjct: 326 --DEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDF-TRVYDVNLSGAFAC 382

Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
            +A    M   + G IVN+GS A+++  + P  + Y A+KA +   SRSL  E+  +GI 
Sbjct: 383 ARAAARLM--SQGGVIVNLGSIASLL--ALPPRNAYCASKAAVTMLSRSLACEWAPAGIR 438

Query: 233 V 233
           V
Sbjct: 439 V 439

Length = 520

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 66.2 bits (162), Expect = 8e-13
 Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 18/185 (9%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
             VTG   GIG++ A +LA  G  L L  R+ D L       +A    T  +   +D S 
Sbjct: 3   CFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGG-TVPEHRALDIS- 60

Query: 116 DLDEGVE---RIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVL---LKNLIKVNVEGT 169
           D D        I  A   +D  V++N  GIS      +  VD++     + ++ VN+ G 
Sbjct: 61  DYDAVAAFAADIHAAHGSMD--VVMNIAGIS-----AWGTVDRLTHEQWRRMVDVNLMGP 113

Query: 170 TKVTQAVLPGMLK-RKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
             V +  +P M+   + G +VN+ S A +V  + P ++ Y+A+K  +   S  L  +  +
Sbjct: 114 IHVIETFVPPMVAAGRGGHLVNVSSAAGLV--ALPWHAAYSASKFGLRGLSEVLRFDLAR 171

Query: 229 SGIDV 233
            GI V
Sbjct: 172 HGIGV 176

Length = 272

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 65.7 bits (160), Expect = 8e-13
 Identities = 51/187 (27%), Positives = 91/187 (48%), Gaps = 17/187 (9%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK----DVSDSIQAKYAKTQIKS 108
           G  ALVTG + GIG+  A  L   G  + L G   +KL+    ++ + ++   A    + 
Sbjct: 6   GRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRD 65

Query: 109 VVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
            V           ++ +  +EG+D+  L+NN GI+     F    D+    ++++VN+  
Sbjct: 66  EVKALG-------QKAEADLEGVDI--LVNNAGITKD-GLFVRMSDEDW-DSVLEVNLTA 114

Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
           T ++T+ +   M++R+ G I+NI S   +    +P  + Y A+KA +  FS+SL  E   
Sbjct: 115 TFRLTRELTHPMMRRRYGRIINITSVVGVT--GNPGQANYCASKAGMIGFSKSLAQEIAT 172

Query: 229 SGIDVQC 235
             + V C
Sbjct: 173 RNVTVNC 179

Length = 245

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 65.5 bits (160), Expect = 9e-13
 Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 13/184 (7%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           ALVTG + GIGK+ A +LA+ G ++ +   R+    ++ ++ I+A   K       V   
Sbjct: 7   ALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDV 66

Query: 115 GDLDEGVERIKEAIEGLDVGVLINNV--GISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
             + E   +I E    LD  V +NN   G+  P      E+++      + +N +     
Sbjct: 67  EKIKEMFAQIDEEFGRLD--VFVNNAASGVLRPAM----ELEESHWDWTMNINAKALLFC 120

Query: 173 TQAVLPGMLKRKKGAIVNIGS-GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
            Q     M K   G I+++ S G+   + +   Y+    +KA ++  +R L VE    GI
Sbjct: 121 AQEAAKLMEKVGGGKIISLSSLGSIRYLEN---YTTVGVSKAALEALTRYLAVELAPKGI 177

Query: 232 DVQC 235
            V  
Sbjct: 178 AVNA 181

Length = 250

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 65.0 bits (159), Expect = 2e-12
 Identities = 53/183 (28%), Positives = 79/183 (43%), Gaps = 15/183 (8%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS-- 114
            +TG   GIG++ A   A  G  +     N   L  ++  + A  A T      +D +  
Sbjct: 5   FITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTG----ALDVTDR 60

Query: 115 GDLDEGVERIKEAIEG-LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              D  +     A  G LDV  L NN GI       F ++       +I +NV+G     
Sbjct: 61  AAWDAALADFAAATGGRLDV--LFNNAGI--LRGGPFEDIPLEAHDRVIDINVKGVLNGA 116

Query: 174 QAVLPGMLKRKKGA-IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
            A LP  LK   GA ++N  S +AI     P  +VY+ATK  +   + +L +E+R+ GI 
Sbjct: 117 HAALP-YLKATPGARVINTSSASAIY--GQPGLAVYSATKFAVRGLTEALDLEWRRHGIR 173

Query: 233 VQC 235
           V  
Sbjct: 174 VAD 176

Length = 260

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 64.7 bits (158), Expect = 2e-12
 Identities = 42/180 (23%), Positives = 73/180 (40%), Gaps = 9/180 (5%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           A V G  DG+G + A + A  G ++ L  R   KL+ +   I         K+V  D   
Sbjct: 2   AAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAG-GSAKAVPTDARD 60

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
             ++    + I+E I  L+  VL+ N G +        E    + + + ++   G     
Sbjct: 61  EDEVIALFDLIEEEIGPLE--VLVYNAGANVW--FPILETTPRVFEKVWEMAAFGGFLAA 116

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           +     ML R +G I  I +GA   +     ++ +A  K  +   ++S+  E    GI V
Sbjct: 117 REAAKRMLARGRGTI--IFTGATASLRGRAGFAAFAGAKFALRALAQSMARELGPKGIHV 174

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 64.2 bits (157), Expect = 2e-12
 Identities = 47/188 (25%), Positives = 72/188 (38%), Gaps = 38/188 (20%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           L+TG   GIG + A      G  +  V           D             + +D S D
Sbjct: 9   LITGAASGIGLAQARAFLAQGAQVYGV-----------DKQDKPDLSGNFHFLQLDLSDD 57

Query: 117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAV 176
           L+   + +        V +L N  GI   Y     +      +++   N+  T  +T+A 
Sbjct: 58  LEPLFDWVPS------VDILCNTAGILDDYKPL-LDTSLEEWQHIFDTNLTSTFLLTRAY 110

Query: 177 LPGMLKRKKGAIVNI---------GSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
           LP ML+RK G I+N+         G GAA           Y A+K  +  F++ L ++Y 
Sbjct: 111 LPQMLERKSGIIINMCSIASFVAGGGGAA-----------YTASKHALAGFTKQLALDYA 159

Query: 228 KSGIDVQC 235
           K GI V  
Sbjct: 160 KDGIQVFG 167

Length = 235

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 64.6 bits (158), Expect = 2e-12
 Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 23/187 (12%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLV--GRNPDKLKDVSDSIQAKYAKTQIKSVVVDF 113
           AL+TG   GIG++ A   A+ G ++ +       D  ++    I+ +  K       +  
Sbjct: 29  ALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRK------CLLI 82

Query: 114 SGDLD------EGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVE 167
            GDL       + V+ + +    LD+  L+NN    +P      ++    L+   + N+ 
Sbjct: 83  PGDLGDESFCRDLVKEVVKEFGKLDI--LVNNAAYQHP-QESIEDITTEQLEKTFRTNIF 139

Query: 168 GTTKVTQAVLPGMLKRKKGA-IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
               +T+A LP +   KKG+ I+N  S  A    S  L   YAATK  I  F+R L ++ 
Sbjct: 140 SMFYLTKAALPHL---KKGSSIINTTSVTAYK-GSPHLLD-YAATKGAIVAFTRGLSLQL 194

Query: 227 RKSGIDV 233
            + GI V
Sbjct: 195 AEKGIRV 201

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 63.8 bits (156), Expect = 5e-12
 Identities = 57/181 (31%), Positives = 80/181 (44%), Gaps = 27/181 (14%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G   LVTG T GIG   A      G  +V+ GR      +  D   A++    ++     
Sbjct: 6   GRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAP---ETVDGRPAEFHAADVRD---- 58

Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARF------FHEVDQVLLKNLIKVNV 166
               +   V+ I E    LD  VL+NN G S PYA        FHE        ++++N+
Sbjct: 59  -PDQVAALVDAIVERHGRLD--VLVNNAGGS-PYALAAEASPRFHE-------KIVELNL 107

Query: 167 EGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
                V QA    M ++   G+IVNIGS +    PS P  + Y A KA +   +RSL VE
Sbjct: 108 LAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRR-PS-PGTAAYGAAKAGLLNLTRSLAVE 165

Query: 226 Y 226
           +
Sbjct: 166 W 166

Length = 252

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 63.2 bits (154), Expect = 6e-12
 Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 30/190 (15%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           ++TG + G+GK+ A + A+ G N+V+ GR  +KL++    I+      Q+ +V +D    
Sbjct: 5   IITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQ--FPGQVLTVQMDVRN- 61

Query: 117 LDEGVER-IKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLL---KNLIKVNVEGTTK 171
             E V++ +++  E    +  LINN         F    + + +    ++I + + GT  
Sbjct: 62  -PEDVQKMVEQIDEKFGRIDALINNAA-----GNFICPAEDLSVNGWNSVIDIVLNGTFY 115

Query: 172 VTQAVLPGMLKRK-KGAIVNI------GSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYV 224
            +QAV    +++  KG I+N+       +G   VI S       AA KA +   +R+L V
Sbjct: 116 CSQAVGKYWIEKGIKGNIINMVATYAWDAGPG-VIHS-------AAAKAGVLAMTRTLAV 167

Query: 225 EY-RKSGIDV 233
           E+ RK GI V
Sbjct: 168 EWGRKYGIRV 177

Length = 252

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 62.8 bits (153), Expect = 7e-12
 Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 19/184 (10%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           A+VTG + GIG + A +LA  G  + +    +     ++   I+A  A  +  +V  D +
Sbjct: 8   AIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEA--AGGRAIAVQADVA 65

Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEV-DQVLLKNLIKVNVEGT 169
               +    +  + A   +D  VL+NN G+      A F  E  D+      I  N+ G 
Sbjct: 66  DAAAVTRLFDAAETAFGRID--VLVNNAGVMPLGTIADFDLEDFDRT-----IATNLRGA 118

Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
             V +     +   + G I+N+ S + I +P  P Y  YAA+KA ++     L  E R  
Sbjct: 119 FVVLREAARHL--GQGGRIINL-STSVIALPL-PGYGPYAASKAAVEGLVHVLANELRGR 174

Query: 230 GIDV 233
           GI V
Sbjct: 175 GITV 178

Length = 245

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 63.5 bits (155), Expect = 8e-12
 Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 21/187 (11%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPD-----KLKDVSDSIQAKYAKTQIKSVV 110
           L+TG   G G   A +L   G   VL G    +     +L+ V           +++++ 
Sbjct: 4   LITGCDSGFGNLLAKKLDSLGF-TVLAGCLTKNGPGAKELRRVCSD--------RLRTLQ 54

Query: 111 VDF--SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
           +D      +    + +KE +    +  L+NN GI                +  ++VN+ G
Sbjct: 55  LDVTKPEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDY-RKCMEVNLFG 113

Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
           T +VT+A LP +L+R KG +VN+ S    V P  P    Y A+KA ++ FS SL  E + 
Sbjct: 114 TVEVTKAFLP-LLRRAKGRVVNVSSMGGRV-PF-PAGGAYCASKAAVEAFSDSLRRELQP 170

Query: 229 SGIDVQC 235
            G+ V  
Sbjct: 171 WGVKVSI 177

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 62.6 bits (153), Expect = 8e-12
 Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 18/158 (11%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           AL+TG + GIG + A +LA T   L+L GR  ++L +++  +               F  
Sbjct: 6   ALITGASRGIGAAIARELAPTH-TLLLGGRPAERLDELAAEL----------PGATPFPV 54

Query: 116 DLDEGVERIKEAIEGLD-VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
           DL +  E I  A+E L  + VL++N G++         VD+   +  ++VNV    ++T+
Sbjct: 55  DLTDP-EAIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDE--WRATLEVNVVAPAELTR 111

Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATK 212
            +LP  L+   G +V I SGA   + ++P +  YAA+K
Sbjct: 112 LLLPA-LRAAHGHVVFINSGAG--LRANPGWGSYAASK 146

Length = 227

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 62.9 bits (153), Expect = 9e-12
 Identities = 48/183 (26%), Positives = 75/183 (40%), Gaps = 19/183 (10%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           L+TG   G+G + A +LAK G  L LV  N + L+    ++       ++  +  D S +
Sbjct: 7   LITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADVSDE 66

Query: 117 ------LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
                 +D  VE+    I+G       NN GI         +        ++ +N+ G  
Sbjct: 67  AQVEAYVDATVEQFGR-IDG-----FFNNAGIEGKQN-LTEDFGADEFDKVVSINLRGVF 119

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAI--VIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
              + VL  M ++  G IVN  S   I  V         YAA K  +   +R+  VEY +
Sbjct: 120 YGLEKVLKVMREQGSGMIVNTASVGGIRGVGNQSG----YAAAKHGVVGLTRNSAVEYGQ 175

Query: 229 SGI 231
            GI
Sbjct: 176 YGI 178

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 62.9 bits (153), Expect = 1e-11
 Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 17/171 (9%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A+VTG + GIGK+   +L + G N++      +   +  D  +          V V    
Sbjct: 9   AIVTGGSQGIGKAVVNRLKEEGSNVINFDIK-EPSYNDVDYFK----------VDVSNKE 57

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
            + +G++ +      +D+  L+NN GI   Y    H V++     +I VNV G   +++ 
Sbjct: 58  QVIKGIDYVISKYGRIDI--LVNNAGIE-SYGAI-HAVEEDEWDRIINVNVNGIFLMSKY 113

Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
            +P MLK+ KG I+NI S  +  +  +   + Y  +K  +   +RS+ V+Y
Sbjct: 114 TIPYMLKQDKGVIINIASVQSFAVTRNA--AAYVTSKHAVLGLTRSIAVDY 162

Length = 258

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 62.8 bits (153), Expect = 1e-11
 Identities = 51/181 (28%), Positives = 79/181 (43%), Gaps = 10/181 (5%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQ-AKYAKTQIKSVVVDFS 114
           A++TG   GIG++ A +LA  G N+VL   N ++      +IQ    A     +V  D +
Sbjct: 5   AIITGAAQGIGRAIAERLAADGFNIVLADLNLEEA--AKSTIQEISEAGYNAVAVGADVT 62

Query: 115 GDLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
            D D+    I +A+E      V++NN GI+         + +  LK +  VNV G     
Sbjct: 63  -DKDDVEALIDQAVEKFGSFDVMVNNAGIA--PITPLLTITEEDLKKVYAVNVFGVLFGI 119

Query: 174 QAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
           QA      K    G I+N  S A +     P    Y+A+K  +   +++   E    GI 
Sbjct: 120 QAAARQFKKLGHGGKIINASSIAGVQ--GFPNLGAYSASKFAVRGLTQTAAQELAPKGIT 177

Query: 233 V 233
           V
Sbjct: 178 V 178

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 62.6 bits (152), Expect = 1e-11
 Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 17/191 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLN----LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVV 111
            LVTG + G G++ A +LAK   +    LVL  RN + L+ +   I A+ +  ++  V +
Sbjct: 3   CLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSL 62

Query: 112 DFSG--DLDEGVERIKEAI--EGLDVGVLINNVGISYPYARFFHEV-DQVLLKNLIKVNV 166
           D      L++ ++ ++E    +GL   +LINN G     ++ F ++ D   ++N   +N+
Sbjct: 63  DLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNL 122

Query: 167 EGTTKVTQAVLPGMLKRKKGA---IVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSL 222
                +T +VL    K   G    +VNI S  AI        +++Y A KA  D   + L
Sbjct: 123 TSMLCLTSSVLK-AFKDSPGLNRTVVNISSLCAIQPFKG---WALYCAGKAARDMLFQVL 178

Query: 223 YVEYRKSGIDV 233
            +E +   + V
Sbjct: 179 ALEEKNPNVRV 189

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 62.5 bits (152), Expect = 1e-11
 Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 25/190 (13%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVV 111
           G  ALVTG   G+G+  A  LA+ G ++V  GR  P + +   +++  ++      S+  
Sbjct: 5   GKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFL-----SLTA 59

Query: 112 DFS--GDLDEGVERIKEAIEGLDVGVLINNVG-ISYPYARFFHEVDQVLLKNLIKVNVEG 168
           D S    +   V+   E    +D  +L+NN G I    A  F E D     +++ VN++ 
Sbjct: 60  DLSDIEAIKALVDSAVEEFGHID--ILVNNAGIIRRADAEEFSEKD---WDDVMNVNLKS 114

Query: 169 TTKVTQAVLPGMLKR-KKGAIVNIGS----GAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
              +TQA     LK+ + G I+NI S       I +PS      Y A+K  +   ++ L 
Sbjct: 115 VFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPS------YTASKHAVAGLTKLLA 168

Query: 224 VEYRKSGIDV 233
            E+   GI+V
Sbjct: 169 NEWAAKGINV 178

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 61.9 bits (150), Expect = 2e-11
 Identities = 52/185 (28%), Positives = 98/185 (52%), Gaps = 13/185 (7%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKT--QIKSVV 110
           G  A+VTG   GIGK+    LA+ G  +V+   N +  K+ ++++  +  K    + +V 
Sbjct: 6   GKVAIVTGGAKGIGKAITVALAQEGAKVVI---NYNSSKEAAENLVNELGKEGHDVYAVQ 62

Query: 111 VDFSGDLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
            D S  +++    ++EA+     V +L+NN GI+    R F ++++   + +I VN+   
Sbjct: 63  ADVS-KVEDANRLVEEAVNHFGKVDILVNNAGITRD--RTFKKLNREDWERVIDVNLSSV 119

Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL-YSVYAATKAYIDQFSRSLYVEYRK 228
              T AVLP + + ++G I++I S   I+  +     + Y+A KA +  F++SL +E  K
Sbjct: 120 FNTTSAVLPYITEAEEGRIISISS---IIGQAGGFGQTNYSAAKAGMLGFTKSLALELAK 176

Query: 229 SGIDV 233
           + + V
Sbjct: 177 TNVTV 181

Length = 247

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 61.9 bits (151), Expect = 2e-11
 Identities = 54/190 (28%), Positives = 85/190 (44%), Gaps = 23/190 (12%)

Query: 50  RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKS- 108
           R  G  AL+TG T GIG   A Q    G  + + GR+P  L         + A+ ++   
Sbjct: 3   RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASL---------EAARAELGES 53

Query: 109 --VVVDFSGDLD---EGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIK 163
             V+   +GD+       + + EA   LD  V I N G++        + D+ +      
Sbjct: 54  ALVIRADAGDVAAQKALAQALAEAFGRLDA-VFI-NAGVA--KFAPLEDWDEAMFDRSFN 109

Query: 164 VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
            NV+G   + QA+LP +L      ++N    A I +P+    SVYAA+KA +   +++L 
Sbjct: 110 TNVKGPYFLIQALLP-LLANPASIVLNGSINAHIGMPNS---SVYAASKAALLSLAKTLS 165

Query: 224 VEYRKSGIDV 233
            E    GI V
Sbjct: 166 GELLPRGIRV 175

Length = 249

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 61.3 bits (149), Expect = 3e-11
 Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 11/185 (5%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           A+VTG + GIG++ A +LA  G ++ +    + D+  +V   + A   +       +   
Sbjct: 4   AIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADIGEL 63

Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
            D +  +++  E    LD   L+NN GI+        ++ +     LI +N+ G   +TQ
Sbjct: 64  SDHEALLDQAWEDFGRLD--CLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFLTQ 121

Query: 175 AVLPGMLKRKK------GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
           AV   M+++         +I+ + S  A ++   P    Y  +KA +   +R L      
Sbjct: 122 AVARRMVEQPDRFDGPHRSIIFVTSINAYLV--SPNRGEYCISKAGLSMATRLLAYRLAD 179

Query: 229 SGIDV 233
            GI V
Sbjct: 180 EGIAV 184

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 60.9 bits (148), Expect = 4e-11
 Identities = 55/187 (29%), Positives = 97/187 (51%), Gaps = 15/187 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            L+TG + G+G++ A +LA  G +++++  +P + +  +D++ A       K++ + F  
Sbjct: 9   VLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAF-- 66

Query: 116 DLDEG------VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
           D+ +       ++   E    LD  +L+NN GI+   A  F E+      ++I VN++G 
Sbjct: 67  DVRDFAATRAALDAGVEEFGRLD--ILVNNAGIATDAA--FAELSIEEWDDVIDVNLDGF 122

Query: 170 TKVTQAVLPGMLK-RKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
             VTQA LP M++ R+ G IVNI S A +    +     YAA+KA +   +++L  E   
Sbjct: 123 FNVTQAALPPMIRARRGGRIVNIASVAGVR--GNRGQVNYAASKAGLIGLTKTLANELAP 180

Query: 229 SGIDVQC 235
            GI V  
Sbjct: 181 RGITVNA 187

Length = 249

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 60.6 bits (147), Expect = 4e-11
 Identities = 48/193 (24%), Positives = 79/193 (40%), Gaps = 35/193 (18%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           ALVTG + GIG++ A  L   G  + +  R+      ++ +   +     +  +  D   
Sbjct: 3   ALVTGASRGIGEATARLLHAEGYRVGICARDE---ARLAAAAAQELEG--VLGLAGDVRD 57

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINN--VGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
             D+   V+ ++EA  GLD   L+NN  VG+  P      E +  L   L          
Sbjct: 58  EADVRRAVDAMEEAFGGLD--ALVNNAGVGVMKPVEELTPE-EWRL--VLDTNLTGAFYC 112

Query: 172 VTQAVLPGMLKRKKGAIVNIGS---------GAAIVIPSDPLYSVYAATKAYIDQFSRSL 222
           + +A    +L+R  G IVN+GS         GAA           Y A+K  +   S + 
Sbjct: 113 IHKAAPA-LLRRGGGTIVNVGSLAGKNAFKGGAA-----------YNASKFGLLGLSEAA 160

Query: 223 YVEYRKSGIDVQC 235
            ++ R++ I V  
Sbjct: 161 MLDLREANIRVVN 173

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 60.7 bits (147), Expect = 5e-11
 Identities = 52/195 (26%), Positives = 77/195 (39%), Gaps = 51/195 (26%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK--------------DVSDSIQAKYA 102
           L+TG T GIGK  A   AK G  ++  GRN   L               DV+D    K A
Sbjct: 5   LITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAA 64

Query: 103 KTQIK---SVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK 159
            +Q+     + +  +GD            E +D G                  VD  L+ 
Sbjct: 65  LSQLPFIPELWIFNAGD-----------CEYMDDGK-----------------VDATLMA 96

Query: 160 NLIKVNVEGTTKVTQAVLPGMLKRKKGAIV-NIGSGAAIVIPSDPLYSVYAATKAYIDQF 218
            +  VNV G     + + P +    +  IV +I S  A+     P    Y A+KA +  F
Sbjct: 97  RVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELAL-----PRAEAYGASKAAVAYF 151

Query: 219 SRSLYVEYRKSGIDV 233
           +R+L ++ R  GI+V
Sbjct: 152 ARTLQLDLRPKGIEV 166

Length = 240

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 60.5 bits (147), Expect = 7e-11
 Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 16/187 (8%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVV 111
           G   ++TG + G+G++ A +  K    +V+  R + ++  DV++ I+   A  +  +V  
Sbjct: 7   GKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKK--AGGEAIAVKG 64

Query: 112 DFSGDLDEGVER-IKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVE 167
           D +  ++  V   I+ A++    LDV  +INN GI        HE+       +I  N+ 
Sbjct: 65  DVT--VESDVVNLIQTAVKEFGTLDV--MINNAGIENAVPS--HEMSLEDWNKVINTNLT 118

Query: 168 GTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
           G    ++  +   ++   KG I+N+ S     IP  PL+  YAA+K  +   + +L +EY
Sbjct: 119 GAFLGSREAIKYFVEHDIKGNIINMSS-VHEQIPW-PLFVHYAASKGGVKLMTETLAMEY 176

Query: 227 RKSGIDV 233
              GI V
Sbjct: 177 APKGIRV 183

Length = 261

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 60.2 bits (146), Expect = 8e-11
 Identities = 44/178 (24%), Positives = 74/178 (41%), Gaps = 10/178 (5%)

Query: 57  LVTGPTDGIGKSFAFQLA---KTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF 113
           L+TG + GIG   A +LA        +    R+  K   + ++  A    T ++++ +D 
Sbjct: 4   LITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGT-LETLQLDV 62

Query: 114 SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
                + V    E +    V VL+ N G+           D +   ++  VNV GT ++ 
Sbjct: 63  CDS--KSVAAAVERVTERHVDVLVCNAGVGLLGPLEALSEDAM--ASVFDVNVFGTVRML 118

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           QA LP M +R  G I+   S   +     P   VY A+K  ++    SL V+     +
Sbjct: 119 QAFLPDMKRRGSGRILVTSSVGGLQ--GLPFNDVYCASKFALEGLCESLAVQLLPFNV 174

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 60.0 bits (146), Expect = 9e-11
 Identities = 54/183 (29%), Positives = 89/183 (48%), Gaps = 9/183 (4%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG + GIG++ A  LA+ G ++++  R  D  + V+D+I A   K +  +  + 
Sbjct: 8   GKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIG 67

Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVL--LKNLIKVNVEGTT 170
               +D     I+E    LD  +L+NN   + PY  F H +D  L   +  + VN+ G  
Sbjct: 68  EMEQIDALFAHIRERHGRLD--ILVNNAAAN-PY--FGHILDTDLGAFQKTVDVNIRGYF 122

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
            ++      M ++  G+IVN+ S    V P D    +Y+ TKA +   +++   E    G
Sbjct: 123 FMSVEAGKLMKEQGGGSIVNVASVNG-VSPGD-FQGIYSITKAAVISMTKAFAKECAPFG 180

Query: 231 IDV 233
           I V
Sbjct: 181 IRV 183

Length = 252

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 60.1 bits (146), Expect = 9e-11
 Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 18/187 (9%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG   G+G   A  LA  G ++++ GRN   L+    +++A     +  ++  D
Sbjct: 11  GQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAE--ALAFD 68

Query: 113 FSGD--LDEGVERIKEAIEGLDVGVLINNVGISYPYARF---FHEVDQVLLKNLIKVNVE 167
            + +  +     RI      LD  +L+NNVG     AR      E+D   ++ L++ ++ 
Sbjct: 69  IADEEAVAAAFARIDAEHGRLD--ILVNNVG-----ARDRRPLAELDDAAIRALLETDLV 121

Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAA-IVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
               +++     M ++  G I+ I S A  +    D   +VY A K  +    R+L  E+
Sbjct: 122 APILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGD---AVYPAAKQGLTGLMRALAAEF 178

Query: 227 RKSGIDV 233
              GI  
Sbjct: 179 GPHGITS 185

Length = 256

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 60.2 bits (146), Expect = 1e-10
 Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 13/169 (7%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A+VTG   G+G + A   A+ G ++++  R   +L +V++ I+A  A  +   V  D + 
Sbjct: 13  AVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRA--AGRRAHVVAADLA- 69

Query: 116 DLDEGVERIKEAIEG---LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
             +       +A+E    LD  +++NNVG + P            L +    NV     +
Sbjct: 70  HPEATAGLAGQAVEAFGRLD--IVVNNVGGTMPNPLLSTSTKD--LADAFTFNVATAHAL 125

Query: 173 TQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSR 220
           T A +P ML+    G+++NI S    +  +   ++ Y   KA +  ++R
Sbjct: 126 TVAAVPLMLEHSGGGSVINISSTMGRL--AGRGFAAYGTAKAALAHYTR 172

Length = 263

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 59.6 bits (145), Expect = 1e-10
 Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 12/165 (7%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVV 111
           G  ALVTG T G+G + A   A+ G   LV+ GRN +K +  +  ++A     +   V  
Sbjct: 6   GKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEA--LGAKAVFVQA 63

Query: 112 DFSGDLDEGVERIKEAIEGLD-VGVLINNVGISYPYAR-FFHEVDQVLLKNLIKVNVEGT 169
           D S D+++    +  A E    +  L+N  G++    R    +    L      VNV   
Sbjct: 64  DLS-DVEDCRRVVAAADEAFGRLDALVNAAGLT---DRGTILDTSPELFDRHFAVNVRAP 119

Query: 170 TKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAATKA 213
             + Q  +  M +RK +G IVNIGS +A      P  + Y A+K 
Sbjct: 120 FFLMQEAIKLMRRRKAEGTIVNIGSMSAHG--GQPFLAAYCASKG 162

Length = 260

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 59.7 bits (145), Expect = 2e-10
 Identities = 56/195 (28%), Positives = 87/195 (44%), Gaps = 30/195 (15%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  AL+TG   GIG++ A   AK G ++ +V  +    +D +++ Q    +   K +++ 
Sbjct: 46  GKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEH--EDANETKQRVEKEGV-KCLLI- 101

Query: 113 FSGDL------DEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNV 166
             GD+       + VE     +  LD  +L+NN    YP         + L K   K N+
Sbjct: 102 -PGDVSDEAFCKDAVEETVRELGRLD--ILVNNAAFQYPQQSLEDITAEQLDKTF-KTNI 157

Query: 167 EGTTKVTQAVLPGMLKRKKG-AIVNIGS-----GAAIVIPSDPLYSVYAATKAYIDQFSR 220
                +T+A LP +   K+G AI+N GS     G   +I        Y+ATK  I  F+R
Sbjct: 158 YSYFHMTKAALPHL---KQGSAIINTGSITGYEGNETLID-------YSATKGAIHAFTR 207

Query: 221 SLYVEYRKSGIDVQC 235
           SL     + GI V  
Sbjct: 208 SLAQSLVQKGIRVNA 222

Length = 290

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 59.0 bits (143), Expect = 2e-10
 Identities = 48/184 (26%), Positives = 82/184 (44%), Gaps = 8/184 (4%)

Query: 50  RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSV 109
           R  G  A++TG   GIG + A +LA  G  +V+   +P+  K  +D +   +  T +   
Sbjct: 4   RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDE 63

Query: 110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
                  ++   +   E    +D  +  NN GIS P             + +  VN+   
Sbjct: 64  D-----AVNALFDTAAETYGSVD--IAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSV 116

Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
               +A LP M+++ KG+I+N  S  A++  +    S Y A+K  +   SR L V++ + 
Sbjct: 117 YLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQIS-YTASKGGVLAMSRELGVQFARQ 175

Query: 230 GIDV 233
           GI V
Sbjct: 176 GIRV 179

Length = 255

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 58.0 bits (141), Expect = 4e-10
 Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 33/196 (16%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD-KLKDVSDSIQAKYAKTQIKSVVVDFS 114
           ALVTG   GIG   A  LA  G +L +  R  D +L      ++A   +      V+ F 
Sbjct: 5   ALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVE------VIFFP 58

Query: 115 GDLDEG------VERIKEAIEGLDVGVLINNVGISYPYARFFHEV-----DQVLLKNLIK 163
            D+ +       ++  + A   +D   L+NN G+         ++     D+VL      
Sbjct: 59  ADVADLSAHEAMLDAAQAAWGRID--CLVNNAGVGVKVRGDLLDLTPESFDRVL-----A 111

Query: 164 VNVEGTTKVTQAVLPGMLKRKK------GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQ 217
           +N+ G   +TQAV   ML + +       +IV + S  AI++   P    Y  +KA +  
Sbjct: 112 INLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMV--SPNRGEYCISKAGLSM 169

Query: 218 FSRSLYVEYRKSGIDV 233
            ++       + GI V
Sbjct: 170 AAQLFAARLAEEGIGV 185

Length = 256

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 57.8 bits (140), Expect = 5e-10
 Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 21/189 (11%)

Query: 55  WALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF 113
             LVTG + G+G + A   A+ G  +V+   ++ D  + ++D +  +     +++ V D 
Sbjct: 7   TVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDR--AIALQADVTDR 64

Query: 114 SGDLDEGVER-IKEAIE--GLDVGVLINNVGISY---PYAR-FFHEVDQVLLKNLIKVNV 166
                E V+     A E  G  +  ++NN    +     AR    ++     +  ++ +V
Sbjct: 65  -----EQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSV 119

Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSG--AAIVIPSDPLYSVYAATKAYIDQFSRSLYV 224
           +G     QA LPGM ++  G I+NIG+      V+P    Y  Y   KA +   +R+L  
Sbjct: 120 KGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVP----YHDYTTAKAALLGLTRNLAA 175

Query: 225 EYRKSGIDV 233
           E    GI V
Sbjct: 176 ELGPYGITV 184

Length = 253

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 57.7 bits (140), Expect = 6e-10
 Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 31/174 (17%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           ++TG   G+G++ A  LA+ G  L L+  N +KL++      A   + +  +  V    D
Sbjct: 9   VITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEED 68

Query: 117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK----------------N 160
           ++    +I E    L+   LINN GI           D +L+K                +
Sbjct: 69  VEATFAQIAEDFGQLN--GLINNAGILR---------DGLLVKAKDGKVTSKMSLEQFQS 117

Query: 161 LIKVNVEGTTKVTQAVLPGMLK-RKKGAIVNIGSGAAIVIPSDPLYSVYAATKA 213
           +I VN+ G     +     M++   KG I+NI S   I    +   + Y+A+KA
Sbjct: 118 VIDVNLTGVFLCGREAAAKMIESGSKGVIINISS---IARAGNMGQTNYSASKA 168

Length = 253

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 57.4 bits (139), Expect = 8e-10
 Identities = 49/172 (28%), Positives = 77/172 (44%), Gaps = 11/172 (6%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            +VTG   GIG++ A +LAK G  +V+   N  K  +  +       +   + + V    
Sbjct: 9   VVVTGSGRGIGRAIAVRLAKEGSLVVV---NAKKRAEEMNETLKMVKENGGEGIGVLADV 65

Query: 116 DLDEGVERI-KEAIEGLD-VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              EG E + K  I+      +L+NN G+       F  VD  L+   I  + +     +
Sbjct: 66  STREGCETLAKATIDRYGVADILVNNAGLG--LFSPFLNVDDKLIDKHISTDFKSVIYCS 123

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
           Q +   M  R+ GAIVNI S A I  P+    S+Y A KA +   ++ L +E
Sbjct: 124 QELAKEM--REGGAIVNIASVAGIR-PA-YGLSIYGAMKAAVINLTKYLALE 171

Length = 252

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 57.1 bits (138), Expect = 9e-10
 Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 9/163 (5%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           LVTG   GIGK  A  L   G  +++VGRNPDKL   ++ I+A      ++    D + D
Sbjct: 11  LVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVT-D 69

Query: 117 LDEGVERIKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
            D+    +  A      L  GV ++  G S         +D    +  + +NV GT  V 
Sbjct: 70  EDQVARAVDAATAWHGRLH-GV-VHCAGGSETIGPITQ-IDSDAWRRTVDLNVNGTMYVL 126

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYID 216
           +     +++   G+ V I S AA    +   +  Y  TK+ +D
Sbjct: 127 KHAARELVRGGGGSFVGISSIAA--SNTHRWFGAYGVTKSAVD 167

Length = 276

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 56.9 bits (138), Expect = 1e-09
 Identities = 48/188 (25%), Positives = 79/188 (42%), Gaps = 24/188 (12%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A++TG + GIG++ A   A+ G  +V+  R   +L  +   I+A+  +       V  +G
Sbjct: 9   AIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGE------AVALAG 62

Query: 116 DL-DEG-----VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
           D+ DE      V    E   GLD+    NN G          E+     +  +  N+   
Sbjct: 63  DVRDEAYAKALVALAVERFGGLDIA--FNNAGTLGEMGP-VAEMSLEGWRETLATNLTSA 119

Query: 170 TKVTQAVLPGMLKRKKGAIV----NIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
               +  +P ML R  G+++     +G  A       P  + YAA+KA +   ++ L  E
Sbjct: 120 FLGAKHQIPAMLARGGGSLIFTSTFVGHTAGF-----PGMAAYAASKAGLIGLTQVLAAE 174

Query: 226 YRKSGIDV 233
           Y   GI V
Sbjct: 175 YGAQGIRV 182

Length = 254

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 57.0 bits (138), Expect = 1e-09
 Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 11/186 (5%)

Query: 49  LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKS 108
           L   G   L+TG + GIG + A   A  G +L LV R+ D L+ ++  ++A +    +  
Sbjct: 3   LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHG-VDVAV 61

Query: 109 VVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
             +D S    E  E++      +D  +L+NN G + P      +VD    +   ++ V G
Sbjct: 62  HALDLS--SPEAREQLAAEAGDID--ILVNNAG-AIP-GGGLDDVDDAAWRAGWELKVFG 115

Query: 169 TTKVTQAVLPGMLKRKKGAIVN-IGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
              +T+   P M  R  G IVN IG+        D  Y   +A  A +  F+R+L  +  
Sbjct: 116 YIDLTRLAYPRMKARGSGVIVNVIGAAGENP---DADYICGSAGNAALMAFTRALGGKSL 172

Query: 228 KSGIDV 233
             G+ V
Sbjct: 173 DDGVRV 178

Length = 259

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 56.7 bits (137), Expect = 2e-09
 Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 13/161 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVTG   GIG + A +L + G  + +V  N +  +  +D +     K    +V  D S 
Sbjct: 5   ALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAI--AVKADVS- 61

Query: 116 DLDEGVERIKEAIEGL-DVGVLINNVGI--SYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
           D D+    +++ ++   D+ V++NN G+  + P      E        +  +NV G    
Sbjct: 62  DRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQ----FDKVYNINVGGVIWG 117

Query: 173 TQAVLPGMLKRKKGA-IVNIGSGAAIVIPSDPLYSVYAATK 212
            QA      K   G  I+N  S A +V   +P  +VY++TK
Sbjct: 118 IQAAQEAFKKLGHGGKIINATSQAGVV--GNPELAVYSSTK 156

Length = 256

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 56.0 bits (135), Expect = 2e-09
 Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 5/180 (2%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVT  TDGIG + A +LA+ G ++V+  R    +     ++Q +          V  + 
Sbjct: 13  ALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGTVCHVGKAE 72

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
           D +  V        G+D  +L++N  ++  +       ++V  K L  VNV+ T  +T+A
Sbjct: 73  DRERLVATAVNLHGGVD--ILVSNAAVNPFFGNILDSTEEVWDKIL-DVNVKATALMTKA 129

Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
           V+P M KR  G++V + S AA   P  P    Y  +K  +   +++L  E     I V C
Sbjct: 130 VVPEMEKRGGGSVVIVSSVAAFH-PF-PGLGPYNVSKTALLGLTKNLAPELAPRNIRVNC 187

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 55.9 bits (135), Expect = 2e-09
 Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 12/184 (6%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG   GIG + A +LA  G  +V+   +P+  + V+   +A     +   V  D
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVA---EAAQGGPRALGVQCD 57

Query: 113 FS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
            +    +    E+      GLD  ++++N GI+        E         + +N+ G  
Sbjct: 58  VTSEAQVQSAFEQAVLEFGGLD--IVVSNAGIATSSP--IAETSLEDWNRSMDINLTGHF 113

Query: 171 KVTQAVLPGMLKRKKGA-IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
            V++     M  +  G  IV   S  A V P  P  + Y+A KA     +R L +E  + 
Sbjct: 114 LVSREAFRIMKSQGIGGNIVFNASKNA-VAPG-PNAAAYSAAKAAEAHLARCLALEGGED 171

Query: 230 GIDV 233
           GI V
Sbjct: 172 GIRV 175

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 54.8 bits (132), Expect = 3e-09
 Identities = 41/181 (22%), Positives = 59/181 (32%), Gaps = 56/181 (30%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            LVTG + GIG + A  LA  G   VLV                       + VVV  + 
Sbjct: 1   VLVTGGSGGIGGAIARWLASRGSPKVLV--------------------VSRRDVVVHNAA 40

Query: 116 DLDEGVE--RIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
            LD+G         IE                                I+ NV GT ++ 
Sbjct: 41  ILDDGRLIDLTGSRIE------------------------------RAIRANVVGTRRLL 70

Query: 174 QAVLPGMLKRKKGAIVNIGS-GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
           +A    M  ++ G  + I S       P       YAA+KA +D  ++    E   +G+ 
Sbjct: 71  EAARELMKAKRLGRFILISSVAGLFGAPGL---GGYAASKAALDGLAQQWASEGWGNGLP 127

Query: 233 V 233
            
Sbjct: 128 A 128

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 55.7 bits (134), Expect = 3e-09
 Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 12/183 (6%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQ-AKYAKTQIKSVVV 111
           G  AL+TG   GIG++FA    + G  + +   N +  +  +  I  A  A   I   V 
Sbjct: 3   GKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPAACA---ISLDVT 59

Query: 112 DFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
           D    +D  V  + +    +D  +L+NN  + +  A       +     L  +NV GT  
Sbjct: 60  D-QASIDRCVAALVDRWGSID--ILVNNAAL-FDLAPIVDITRES-YDRLFAINVSGTLF 114

Query: 172 VTQAVLPGMLKRKKGA-IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
           + QAV   M+ + +G  I+N+ S A      + L  VY ATKA +   ++S  +   + G
Sbjct: 115 MMQAVARAMIAQGRGGKIINMASQAG--RRGEALVGVYCATKAAVISLTQSAGLNLIRHG 172

Query: 231 IDV 233
           I+V
Sbjct: 173 INV 175

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 55.2 bits (133), Expect = 4e-09
 Identities = 43/193 (22%), Positives = 85/193 (44%), Gaps = 16/193 (8%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG--RNPDKLKDVSDSIQAKYAKT-----Q 105
           G  A +TG   G G++ A +LA  G +++ +              + +    +T      
Sbjct: 3   GKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLVEA 62

Query: 106 IKSVVVDFSGD---LDEGVERIKEAIEGLD-VGVLINNVGISYPYARFFHEVDQVLLKNL 161
           +   V+    D   L E    +++ +E    + V++ N G+   Y R   E+ +     +
Sbjct: 63  LGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVL-SYGRS-WELSEEQWDTV 120

Query: 162 IKVNVEGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSR 220
           + +N+ G  +  +AV+P M++R   G+I+   S A +   + P  + YAA K  +   ++
Sbjct: 121 LDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLK--ALPGLAHYAAAKHGLVGLTK 178

Query: 221 SLYVEYRKSGIDV 233
           +L  E  + GI V
Sbjct: 179 TLANELAEYGIRV 191

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 54.9 bits (132), Expect = 5e-09
 Identities = 61/196 (31%), Positives = 89/196 (45%), Gaps = 32/196 (16%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNL-VLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           ALVTG + GIG++ A  LA+ G  + V   +N    ++V + I     K     +  D S
Sbjct: 4   ALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKA--FVLQADIS 61

Query: 115 GDLDEG-VERIKEAIEGLD--VGVLINNVGISYPYARFFHEVDQVLLKNLI--KVNVEGT 169
              DE  V  +  AI+  D  +  L+NN GI +          Q  ++NL   ++N   +
Sbjct: 62  ---DENQVVAMFTAIDQHDEPLAALVNNAGILF---------TQCTVENLTAERINRVLS 109

Query: 170 TKVTQAVL--PGMLKR-------KKGAIVNIGSGAA-IVIPSDPLYSVYAATKAYIDQFS 219
           T VT   L     +KR         GAIVN+ S A+ +  P +  Y  YAA+K  ID  +
Sbjct: 110 TNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGE--YVDYAASKGAIDTLT 167

Query: 220 RSLYVEYRKSGIDVQC 235
             L +E    GI V C
Sbjct: 168 TGLSLEVAAQGIRVNC 183

Length = 247

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 54.7 bits (132), Expect = 8e-09
 Identities = 50/184 (27%), Positives = 92/184 (50%), Gaps = 16/184 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNL-VLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           A+VT    GIGK+ A  LA+ G ++ +    + +  K+ ++ +++   + +I+   +D S
Sbjct: 5   AIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQ--LDLS 62

Query: 115 GDLDEGVERIKEAIEGLD-VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
            DL EG + + + I+ L  + VL+NN G        F ++D    + +  V+V+G    +
Sbjct: 63  -DLPEGAQALDKLIQRLGRIDVLVNNAGAM--TKAPFLDMDFDEWRKIFTVDVDGAFLCS 119

Query: 174 QAVLPGMLKRKKGA-IVNIGSGAAIV---IPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
           Q     M+K+ +G  I+NI S    V    P  P  S Y A K  +   ++++ +E  + 
Sbjct: 120 QIAARHMVKQGQGGRIINITS----VHEHTPL-PGASAYTAAKHALGGLTKAMALELVEH 174

Query: 230 GIDV 233
           GI V
Sbjct: 175 GILV 178

Length = 256

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 54.2 bits (131), Expect = 9e-09
 Identities = 47/189 (24%), Positives = 83/189 (43%), Gaps = 23/189 (12%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSV-VV 111
           G   +V G T GI    A   A+ G N+ +  R+ +K+      +Q    +    S  V 
Sbjct: 9   GKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVR 68

Query: 112 DFSGDLDEGVERIKEAIEGLDVGV-------LINNVGISYPYARFFHEVDQVLLKNLIKV 164
           D++  ++    +I +    +DV V            G+S   A  F        K ++ +
Sbjct: 69  DYAA-VEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMS---ANGF--------KTVVDI 116

Query: 165 NVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYV 224
           ++ GT  V +A  P +L+R   +I+ I +  A  +P  P+ +   A KA +D  +R+L +
Sbjct: 117 DLLGTFNVLKAAYP-LLRRPGASIIQISAPQA-FVPM-PMQAHVCAAKAGVDMLTRTLAL 173

Query: 225 EYRKSGIDV 233
           E+   GI V
Sbjct: 174 EWGPEGIRV 182

Length = 264

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 54.4 bits (131), Expect = 1e-08
 Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 20/185 (10%)

Query: 54  SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF 113
           +W  +TG + G G+    +L   G  +    R PD L D    ++A+Y   ++  + +D 
Sbjct: 4   TW-FITGASSGFGRGMTERLLARGDRVAATVRRPDALDD----LKARYGD-RLWVLQLDV 57

Query: 114 --SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARF--FHEVDQVLLKNLIKVNVEGT 169
             S  +   V+R   A+  +DV  +++N G    Y  F    E+    ++  I  N+ G+
Sbjct: 58  TDSAAVRAVVDRAFAALGRIDV--VVSNAG----YGLFGAAEELSDAQIRRQIDTNLIGS 111

Query: 170 TKVTQAVLPGMLKRKKGAIVNIGS-GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
            +V +A LP + ++  G IV + S G  I  P    +S+Y ATK  I+ F  ++  E   
Sbjct: 112 IQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPG---FSLYHATKWGIEGFVEAVAQEVAP 168

Query: 229 SGIDV 233
            GI+ 
Sbjct: 169 FGIEF 173

Length = 276

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 53.5 bits (128), Expect = 2e-08
 Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 5/182 (2%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  AL+TG + GIGK  A    + G  + +  R+ D L+ ++D I     K       V 
Sbjct: 9   GKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVS 68

Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
               +   ++++   + G+D+ V   N GI         ++     + L   NV G    
Sbjct: 69  QHQQVTSMLDQVTAELGGIDIAVC--NAGIITVTPML--DMPLEEFQRLQNTNVTGVFLT 124

Query: 173 TQAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
            QA    M+K+ + G I+N  S +  +I      S Y A+KA +   ++++ VE     I
Sbjct: 125 AQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHKI 184

Query: 232 DV 233
            V
Sbjct: 185 RV 186

Length = 253

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 53.6 bits (129), Expect = 2e-08
 Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 19/149 (12%)

Query: 52  YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLV--GRNPDKLKDVSDSIQAKYAKTQIKSV 109
            G  A+VTG   G+G+ +A  LAK G ++++   G N D+ + + +    K        V
Sbjct: 14  DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVT-----FV 68

Query: 110 VVDFSGDLDEGVERI-KEAIEGLD-VGVLINNVGI--SYPYARFFHE-VDQVLLKNLIKV 164
            VD +    E  E++ KEA+E    + +L+NN G     P   +  E  + V     + +
Sbjct: 69  QVDLTK--PESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAV-----MDI 121

Query: 165 NVEGTTKVTQAVLPGMLKRKKGAIVNIGS 193
           N+     ++QAV   M K+  G I+NI S
Sbjct: 122 NLNSVYHLSQAVAKVMAKQGSGKIINIAS 150

Length = 258

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 54.2 bits (131), Expect = 2e-08
 Identities = 55/187 (29%), Positives = 79/187 (42%), Gaps = 23/187 (12%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            +VTG   GIG+  A   A+ G  +V    +    +  ++ I+A  A      V V    
Sbjct: 318 VVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDV---S 374

Query: 116 DLDEGVERIKE---AIEGLDVGVLINNVGISYPYARFF-----HEVDQVLLKNLIKVNVE 167
           D D  +E   E   A  G+   +++NN GI    A  F      + D+VL      VN+ 
Sbjct: 375 DADA-MEAFAEWVRAEHGV-PDIVVNNAGIG--MAGGFLDTSAEDWDRVL-----DVNLW 425

Query: 168 GTTKVTQAVLPGMLKRKKGA-IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
           G     +     M++R  G  IVN+ S AA   PS  L   YA +KA +   S  L  E 
Sbjct: 426 GVIHGCRLFGRQMVERGTGGHIVNVASAAAYA-PSRSL-PAYATSKAAVLMLSECLRAEL 483

Query: 227 RKSGIDV 233
             +GI V
Sbjct: 484 AAAGIGV 490

Length = 582

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 53.2 bits (128), Expect = 2e-08
 Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 10/185 (5%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            ++TG + GIG + A   A+ G  + L   N  + +D ++++     +   +++ V    
Sbjct: 5   MIITGASRGIGAATALLAAERGYAVCL---NYLRNRDAAEAVVQAIRRQGGEALAVAADV 61

Query: 116 DLDEGVERIKEAI--EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
             +  V R+ EA+  E   +  L+NN GI     R   ++D   L  +   NV G+    
Sbjct: 62  ADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRL-EQMDAARLTRIFATNVVGSFLCA 120

Query: 174 QAVLPGMLKR---KKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
           +  +  M  R   + GAIVN+ S AA  + S   Y  YAA+K  ID  +  L  E    G
Sbjct: 121 REAVKRMSTRHGGRGGAIVNVSSMAA-RLGSPGEYIDYAASKGAIDTMTIGLAKEVAAEG 179

Query: 231 IDVQC 235
           I V  
Sbjct: 180 IRVNA 184

Length = 248

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 53.0 bits (128), Expect = 2e-08
 Identities = 48/183 (26%), Positives = 75/183 (40%), Gaps = 31/183 (16%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP----DKLKDVSDSIQAKYAKTQIKSVVV 111
           AL+TG    IG + A  L   G  + +         D L    ++++         S   
Sbjct: 9   ALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRP-------GSAAA 61

Query: 112 DFSGDLDEG------VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVN 165
               DL +       V     A   LD   L+NN    YP       + +    +L   N
Sbjct: 62  -LQADLLDPDALPELVAACVAAFGRLD--ALVNNASSFYPTP--LGSITEAQWDDLFASN 116

Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD-PL--YSVYAATKAYIDQFSRSL 222
           ++    ++QA  P  L++++GAIVNI       I ++ PL  Y VY A KA ++  +RSL
Sbjct: 117 LKAPFFLSQAAAP-QLRKQRGAIVNI-----TDIHAERPLKGYPVYCAAKAALEMLTRSL 170

Query: 223 YVE 225
            +E
Sbjct: 171 ALE 173

Length = 249

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 53.3 bits (128), Expect = 3e-08
 Identities = 57/191 (29%), Positives = 90/191 (47%), Gaps = 19/191 (9%)

Query: 50  RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSV 109
           R  G  AL+TG   GIG++ A   A+ G ++ L    P++ +D ++ +Q   A+ +    
Sbjct: 52  RLQGRKALITGADSGIGRATAIAFAREGADIAL-NYLPEEEQDAAEVVQLIQAEGR---K 107

Query: 110 VVDFSGDL-DEG-----VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIK 163
            V   GDL DE      VER  + + GLD  +L+N  G      +   ++         K
Sbjct: 108 AVALPGDLKDEAFCRQLVERAVKELGGLD--ILVNIAG-KQTAVKDIADITTEQFDATFK 164

Query: 164 VNVEGTTKVTQAVLPGMLKRKKGA-IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSL 222
            NV     + +A +P +     GA I+N GS  +   PS  L   YA+TKA I  F+++L
Sbjct: 165 TNVYAMFWLCKAAIPHL---PPGASIINTGSIQSYQ-PSPTLLD-YASTKAAIVAFTKAL 219

Query: 223 YVEYRKSGIDV 233
             +  + GI V
Sbjct: 220 AKQVAEKGIRV 230

Length = 300

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 53.3 bits (128), Expect = 3e-08
 Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 11/189 (5%)

Query: 50  RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIK-- 107
           R  G  ALVTG   GIG+S      K G  + +V    D  ++V DS+  +         
Sbjct: 15  RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCD 74

Query: 108 -SVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNV 166
            +V  D S  +D  V++       LD  +++NN G++ P       V+    + +  VNV
Sbjct: 75  VTVEDDVSRAVDFTVDKFGT----LD--IMVNNAGLTGPPCPDIRNVELSEFEKVFDVNV 128

Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
           +G     +     M+  KKG+IV++ S A+ +    P    Y  +K  +   +RS+  E 
Sbjct: 129 KGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGP--HAYTGSKHAVLGLTRSVAAEL 186

Query: 227 RKSGIDVQC 235
            K GI V C
Sbjct: 187 GKHGIRVNC 195

Length = 280

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 52.8 bits (127), Expect = 3e-08
 Identities = 50/194 (25%), Positives = 80/194 (41%), Gaps = 21/194 (10%)

Query: 56  ALVTGPT--DGIGKSFAFQLAKTGLNLVL---------VGRNPDKLKDVSDSIQAKYAKT 104
           ALVTG +  +GIG +   +LA  G+++           +       + V    + +    
Sbjct: 8   ALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGV 67

Query: 105 QIKSVVVDFSGDLDEGVERIKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNL 161
           + + + +D S        R+  A+    G D  +LINN   S        E+    L   
Sbjct: 68  RCEHMEIDLSQP--YAPNRVFYAVSERLG-DPSILINNAAYSTHTR--LEELTAEQLDKH 122

Query: 162 IKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRS 221
             VNV  T  ++ A       +  G I+N+ SG ++    D L   YAATK  I+ F++S
Sbjct: 123 YAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPDEL--AYAATKGAIEAFTKS 180

Query: 222 LYVEYRKSGIDVQC 235
           L  E  + GI V  
Sbjct: 181 LAPELAEKGITVNA 194

Length = 256

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 52.2 bits (125), Expect = 4e-08
 Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 8/144 (5%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG- 115
           L+TG   GIGK+ A  +AK G  + +V RN  + ++    I+ +     I   +VD S  
Sbjct: 5   LITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVDMSDP 64

Query: 116 -DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
             + E VE  KE  EG  + VLINN G          E+ +  L+     N  GT  +T 
Sbjct: 65  KQVWEFVEEFKE--EGKKLHVLINNAGCMVNK----RELTEDGLEKNFATNTLGTYILTT 118

Query: 175 AVLPGMLKRKKGAIVNIGSGAAIV 198
            ++P + K +   ++ + SG  +V
Sbjct: 119 HLIPVLEKEEDPRVITVSSGGMLV 142

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 52.0 bits (125), Expect = 5e-08
 Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 21/182 (11%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           L+TG + GIG   A +L + G  ++   R PD   DV     A+        +++D   D
Sbjct: 6   LITGCSSGIGLEAALELKRRGYRVLAACRKPD---DV-----ARMNSLGFTGILLDL--D 55

Query: 117 LDEGVERIKEAIEGLDVGVL---INNVGISYPYARF--FHEVDQVLLKNLIKVNVEGTTK 171
             E VER  + +  L    L    NN G    +  +     + +  ++     N  GT +
Sbjct: 56  DPESVERAADEVIALTDNRLYGLFNNAG----FGVYGPLSTISRQQMEQQFSTNFFGTHQ 111

Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           +T  +LP ML   +G IV   S   ++  S P    YAA+K  ++ +S +L +E R SGI
Sbjct: 112 LTMLLLPAMLPHGEGRIVMTSSVMGLI--STPGRGAYAASKYALEAWSDALRMELRHSGI 169

Query: 232 DV 233
            V
Sbjct: 170 KV 171

Length = 256

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 51.9 bits (125), Expect = 6e-08
 Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 28/181 (15%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           A+VTG + G+G + A QL + G+ ++ V R+            A  A  ++  V +D S 
Sbjct: 4   AIVTGHSRGLGAALAEQLLQPGIAVLGVARS-------RHPSLAAAAGERLAEVELDLSD 56

Query: 115 -----GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
                  L   +      ++G    +LINN G   P        D   +   + +NV   
Sbjct: 57  AAAAAAWLAGDLLA--AFVDGASRVLLINNAGTVEPIGPLATL-DAAAIARAVGLNVAAP 113

Query: 170 TKVTQAVL---PGMLKRKKGAIVNIGSGAAIVIPSDPL--YSVYAATKAYIDQFSRSLYV 224
             +T A+        +R+   I++I SGAA     +    +SVY ATKA +D  +R++ +
Sbjct: 114 LMLTAALAQAASDAAERR---ILHISSGAA----RNAYAGWSVYCATKAALDHHARAVAL 166

Query: 225 E 225
           +
Sbjct: 167 D 167

Length = 243

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 51.9 bits (125), Expect = 6e-08
 Identities = 49/189 (25%), Positives = 74/189 (39%), Gaps = 33/189 (17%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           +VTG   GIG + + +LA+ G   V+ GR+    +   +    +     ++  + D    
Sbjct: 11  IVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD-DAQ 69

Query: 117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQV------------LLKNLIKV 164
             + VE+       +D   L+NN G++          D V            L +NLI  
Sbjct: 70  CRDAVEQTVAKFGRIDG--LVNNAGVN----------DGVGLEAGREAFVASLERNLIHY 117

Query: 165 NVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYV 224
            V     +    LP  LK  +GAIVNI S  A+        S YAA K      +R   V
Sbjct: 118 YV-----MAHYCLP-HLKASRGAIVNISSKTALTGQGGT--SGYAAAKGAQLALTREWAV 169

Query: 225 EYRKSGIDV 233
              K G+ V
Sbjct: 170 ALAKDGVRV 178

Length = 258

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 51.1 bits (123), Expect = 8e-08
 Identities = 43/175 (24%), Positives = 69/175 (39%), Gaps = 13/175 (7%)

Query: 55  WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVV--D 112
            ALVTG    IG++ A  LA  G  +V+     +   +         A  +  +V+V  D
Sbjct: 2   VALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSE--AEAQRLKDELNAL-RNSAVLVQAD 58

Query: 113 FS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
            S      + V     A    D  VL+NN    YP      +  +     L  +N++   
Sbjct: 59  LSDFAACADLVAAAFRAFGRCD--VLVNNASAFYPTPLG--QGSEDAWAELFGINLKAPY 114

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
            + QA    +   + G+I+NI   A    P    Y  Y  +KA ++  +RS  +E
Sbjct: 115 LLIQAFARRLAGSRNGSIINI-IDAMTDRPL-TGYFAYCMSKAALEGLTRSAALE 167

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 50.9 bits (122), Expect = 1e-07
 Identities = 52/192 (27%), Positives = 75/192 (39%), Gaps = 15/192 (7%)

Query: 53  GSWALVTGPT--DGIGKSFAFQLAKTGLNLVLV-----GRNPDKLKDVSDSIQAKYAKTQ 105
              A+VTG +  DGIG +   +LA+ G ++         +      D  + IQ +    +
Sbjct: 6   NKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLK 65

Query: 106 IKSVVVDFSGDL---DEGVERIKEAIEGLDV-GVLINNVGISYPYARFFHEVDQVLLKNL 161
               V     DL   D   E + +  E L    +L+NN   +Y     F  +    L   
Sbjct: 66  NGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNA--AYSTNNDFSNLTAEELDKH 123

Query: 162 IKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRS 221
             VNV  TT ++     G  K+  G I+N+ SG             YAATK  ID  + S
Sbjct: 124 YMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQ--GPMVGELAYAATKGAIDALTSS 181

Query: 222 LYVEYRKSGIDV 233
           L  E    GI V
Sbjct: 182 LAAEVAHLGITV 193

Length = 256

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 51.1 bits (122), Expect = 1e-07
 Identities = 54/186 (29%), Positives = 84/186 (45%), Gaps = 17/186 (9%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVTG   GIG++ A   A+ G + V +   P + +D  D ++    +   K+V++   G
Sbjct: 52  ALVTGGDSGIGRAAAIAYAREGAD-VAISYLPVEEEDAQD-VKKIIEECGRKAVLL--PG 107

Query: 116 DL-DEG-----VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
           DL DE      V    +A+ GLD+  L+    ++ P      ++     +    +NV   
Sbjct: 108 DLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPD---IADLTSEQFQKTFAINVFAL 164

Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
             +TQ  +P +    KGA +   S      PS  L   YAATKA I  +SR L  +  + 
Sbjct: 165 FWLTQEAIPLL---PKGASIITTSSIQAYQPSPHLLD-YAATKAAILNYSRGLAKQVAEK 220

Query: 230 GIDVQC 235
           GI V  
Sbjct: 221 GIRVNI 226

Length = 294

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 50.8 bits (122), Expect = 1e-07
 Identities = 42/179 (23%), Positives = 83/179 (46%), Gaps = 20/179 (11%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK-LKDVSDSIQAKYAKTQIKSVVVDFS 114
            ++TG + G+G++ A QL + G +++ + R  +K L  +++   +           +D  
Sbjct: 4   VIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHS-----LDLQ 58

Query: 115 --GDLDEGVERIKEAIEGLDVG--VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
              +L+     I  +I+  +V    LINN G+  P         + L+ N + +N+    
Sbjct: 59  DVHELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITN-VHLNLLAPM 117

Query: 171 KVTQAVLPGMLKRKKGA--IVNIGSGAAIVIPSDPLY--SVYAATKAYIDQFSRSLYVE 225
            +T   +    K  K    ++NI SGAA     +P +  S Y ++KA +D F++++  E
Sbjct: 118 ILTSTFMK-HTKDWKVDKRVINISSGAA----KNPYFGWSAYCSSKAGLDMFTQTVATE 171

Length = 251

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 50.5 bits (120), Expect = 2e-07
 Identities = 51/192 (26%), Positives = 82/192 (42%), Gaps = 23/192 (11%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVV 111
           G  ALVTG + GIG++ A +LA  G L  +  G   ++ ++    IQ+            
Sbjct: 4   GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSA------F 57

Query: 112 DFSGDLD--EGVERIKEAIEG--------LDVGVLINNVGISYPYARFFHEVDQVLLKNL 161
               +L+   GVE +  +++             +LINN GI  P A F  E  +     +
Sbjct: 58  SIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIG-PGA-FIEETTEQFFDRM 115

Query: 162 IKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRS 221
           + VN +    + Q  L  +  R    I+NI S A  +  S P +  Y+ TK  I+  + +
Sbjct: 116 VSVNAKAPFFIIQQALSRL--RDNSRIINISSAATRI--SLPDFIAYSMTKGAINTMTFT 171

Query: 222 LYVEYRKSGIDV 233
           L  +    GI V
Sbjct: 172 LAKQLGARGITV 183

Length = 252

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 51.0 bits (122), Expect = 2e-07
 Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 19/186 (10%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A VTG   GIG+  A +LA  G ++VL   N +  + V+  I  ++   +  ++ +D + 
Sbjct: 417 AFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVT- 475

Query: 116 DLDEGVERIKEAIE-------GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
             DE  + +K A         G+D  +++NN GI+   + F     Q    N + +   G
Sbjct: 476 --DE--QAVKAAFADVALAYGGVD--IVVNNAGIATS-SPFEETTLQEWQLN-LDILATG 527

Query: 169 TTKVTQAVLPGMLKRKKGA-IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
              V +     M ++  G  IV I S  A+   +    S Y+A KA     +R L  E  
Sbjct: 528 YFLVAREAFRQMREQGLGGNIVFIASKNAVY--AGKNASAYSAAKAAEAHLARCLAAEGG 585

Query: 228 KSGIDV 233
             GI V
Sbjct: 586 TYGIRV 591

Length = 676

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 50.0 bits (120), Expect = 2e-07
 Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 20/174 (11%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDS-IQAKYAKTQIKSVVV 111
           G  A+VTG   G+G +   +L   G  +V++       + V+      ++    + S   
Sbjct: 2   GLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETVAKLGDNCRFVPVDVTSEK- 60

Query: 112 DFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQV----LLKNLIKVNVE 167
               D+   +   K     LD  +++N  GI+     +  +  Q     L + +I VN+ 
Sbjct: 61  ----DVKAALALAKAKFGRLD--IVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLI 114

Query: 168 GTTKVTQAVLPGMLKR------KKGAIVNIGSGAAIVIPSDPLYSVYAATKAYI 215
           GT  V +     M K       ++G I+N  S AA         + Y+A+K  I
Sbjct: 115 GTFNVIRLAAGAMGKNEPDQGGERGVIINTASVAA--FEGQIGQAAYSASKGGI 166

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 49.9 bits (119), Expect = 3e-07
 Identities = 53/191 (27%), Positives = 84/191 (43%), Gaps = 27/191 (14%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIK--SVV 110
           G  A++TG   G+G+  A  LAK G ++V VG         +   QA+      K   + 
Sbjct: 8   GKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE------APETQAQVEALGRKFHFIT 61

Query: 111 VDFSG--DLDEGVERIKEAIEGLDVGVLINNVG-ISYPYARFFHEVDQVLLKNLIKVNVE 167
            D     D+D  V +  E +  +D  +LINN G I       F   D     ++I +N +
Sbjct: 62  ADLIQQKDIDSIVSQAVEVMGHID--ILINNAGIIRRQDLLEFGNKD---WDDVININQK 116

Query: 168 GTTKVTQAVLPGMLKRKKGA-IVNIGS----GAAIVIPSDPLYSVYAATKAYIDQFSRSL 222
               ++QAV    +K+  G  I+NI S       I +PS      Y A+K+ +   +R+L
Sbjct: 117 TVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPS------YTASKSAVMGLTRAL 170

Query: 223 YVEYRKSGIDV 233
             E  +  I+V
Sbjct: 171 ATELSQYNINV 181

Length = 251

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 49.7 bits (119), Expect = 4e-07
 Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 14/183 (7%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A+VTG + GIG +    L + G ++ + GR+ ++L      ++ K+   ++ +   D   
Sbjct: 11  AVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDV-- 68

Query: 116 DLDEG-VERIKEAIE----GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
            LDE  V     A+E    G+D  +L+NN G     + F    D      L ++      
Sbjct: 69  -LDEADVAAFAAAVEARFGGVD--MLVNNAGQGR-VSTFADTTDDAWRDEL-ELKYFSVI 123

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
             T+A LP +      +IV + S  A+  P   + +  AA +A +    +SL  E    G
Sbjct: 124 NPTRAFLPLLRASAAASIVCVNSLLALQ-PEPHMVATSAA-RAGLLNLVKSLATELAPKG 181

Query: 231 IDV 233
           + V
Sbjct: 182 VRV 184

Length = 265

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 49.5 bits (118), Expect = 4e-07
 Identities = 52/196 (26%), Positives = 78/196 (39%), Gaps = 27/196 (13%)

Query: 48  NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIK 107
           NLR  G  A++TG   GIGK  A   A  G ++V+   N D    V D IQ    +    
Sbjct: 6   NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFAC 65

Query: 108 SVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVG------ISYPYARFFHEVDQVLLKNL 161
              +    +L    +     +  +D  +L+NN G         P A F         +  
Sbjct: 66  RCDITSEQELSALADFALSKLGKVD--ILVNNAGGGGPKPFDMPMADF---------RRA 114

Query: 162 IKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA----IVIPSDPLYSVYAATKAYIDQ 217
            ++NV     ++Q V P M K   G I+ I S AA    I + S      YA++KA    
Sbjct: 115 YELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTS------YASSKAAASH 168

Query: 218 FSRSLYVEYRKSGIDV 233
             R++  +  +  I V
Sbjct: 169 LVRNMAFDLGEKNIRV 184

Length = 255

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 49.3 bits (118), Expect = 6e-07
 Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 18/174 (10%)

Query: 58  VTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDL 117
           +TG + GIG++ A   A+ G  LVL  R+ + L+ V++  +A  A  ++  V  D + D 
Sbjct: 12  ITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGA--EVLVVPTDVT-DA 68

Query: 118 DEGVERIKEAIE-GLDVGVLINNVGISYPYARFFHEV-----DQVLLKNLIKVNVEGTTK 171
           D+      +A   G  + V +NNVG+       F E      +QV+  NLI     G  +
Sbjct: 69  DQVKALATQAASFGGRIDVWVNNVGVGAVGR--FEETPIEAHEQVIQTNLI-----GYMR 121

Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
              A LP   K+  G  +N+ S       + P  + Y+A+K  +  FS +L  E
Sbjct: 122 DAHAALPIFKKQGHGIFINMISLGGFA--AQPYAAAYSASKFGLRGFSEALRGE 173

Length = 330

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 48.7 bits (116), Expect = 7e-07
 Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 28/181 (15%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  A+VTG   GIGK       + G  +V          D+ +   A +A+ +  ++   
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFA--------DIDEERGADFAEAEGPNLFF- 51

Query: 113 FSGDL-DEG-----VERIKEAIEGLDVGVLINNVGISYP---YARFFHEVDQVLLKNLIK 163
             GD+ DE      V  + E +  +D  VL+NN          +    E D++L      
Sbjct: 52  VHGDVADETLVKFVVYAMLEKLGRID--VLVNNAARGSKGILSSLLLEEWDRIL-----S 104

Query: 164 VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
           VN+ G  ++++     ++K  KG I+NI S  A    S+P    YAA+K  +   + +L 
Sbjct: 105 VNLTGPYELSRYCRDELIK-NKGRIINIASTRA--FQSEPDSEAYAASKGGLVALTHALA 161

Query: 224 V 224
           +
Sbjct: 162 M 162

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 47.7 bits (113), Expect = 1e-06
 Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 11/153 (7%)

Query: 47  KNLRKYGSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQ 105
           KNL   G  ALVTG + GIG++ A +LA  G L  +  GRN     +    I++   K  
Sbjct: 2   KNLD--GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAF 59

Query: 106 IKSVVVDFSGDLDEGVERIKEAIE----GLDVGVLINNVGISYPYARFFHEVDQVLLKNL 161
           +    ++    + + VE++K  ++      ++ +L+NN GI            + +   +
Sbjct: 60  LIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGT--IENTTEEIFDEI 117

Query: 162 IKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSG 194
           + VN++    + Q  LP  L R +G ++NI S 
Sbjct: 118 MAVNIKAPFFLIQQTLP--LLRAEGRVINISSA 148

Length = 254

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 46.5 bits (110), Expect = 3e-06
 Identities = 55/189 (29%), Positives = 86/189 (45%), Gaps = 27/189 (14%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF-- 113
           A VTG   GIG S   +L K G  +V  G  P+  +      + K+ + Q K++  DF  
Sbjct: 6   AYVTGGMGGIGTSICQRLHKDGFKVV-AGCGPNSPR------RVKWLEDQ-KALGFDFIA 57

Query: 114 ----SGDLD---EGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNV 166
                GD D      +++K  +  +DV  L+NN GI+      F ++ +     +I  N+
Sbjct: 58  SEGNVGDWDSTKAAFDKVKAEVGEIDV--LVNNAGITRDVV--FRKMTREDWTAVIDTNL 113

Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY--SVYAATKAYIDQFSRSLYV 224
                VT+ V+ GM++R  G I+NI S    V      +  + Y+  KA I  F+ SL  
Sbjct: 114 TSLFNVTKQVIDGMVERGWGRIINISS----VNGQKGQFGQTNYSTAKAGIHGFTMSLAQ 169

Query: 225 EYRKSGIDV 233
           E    G+ V
Sbjct: 170 EVATKGVTV 178

Length = 246

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 46.2 bits (110), Expect = 5e-06
 Identities = 45/209 (21%), Positives = 80/209 (38%), Gaps = 28/209 (13%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A+V G    +G      LA+ G  + +   N +K  +V+  I A+Y +        D + 
Sbjct: 5   AVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS 64

Query: 116 DLDEGVERIKEAIEGL--DVGVLINNVGI-------SYPYARFFHEVDQVLLKNLIKVNV 166
             ++ V  +   ++ +   V +L+ N GI        +    F            ++VN+
Sbjct: 65  --EQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDF---------DRSLQVNL 113

Query: 167 EGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
            G     +     M++   +G I+ I S +  V       S Y+A K      ++SL ++
Sbjct: 114 VGYFLCAREFSRLMIRDGIQGRIIQINSKSGKV--GSKHNSGYSAAKFGGVGLTQSLALD 171

Query: 226 YRKSGIDVQCQVLFLLCFYNLNDLVMIQS 254
             + GI V       L   NL    M QS
Sbjct: 172 LAEYGITVHS-----LMLGNLLKSPMFQS 195

Length = 259

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 46.0 bits (109), Expect = 6e-06
 Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 6/144 (4%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  A  T  + GIG   A  LA+ G +++L+ RN + LK   + I+++ +   +  +V D
Sbjct: 8   GKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSE-SNVDVSYIVAD 66

Query: 113 FSGDLDEGVER-IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
            +    E +ER +KE     +  +   + G   P   +F E+     +  +K+ +     
Sbjct: 67  LTK--REDLERTVKELKNIGEPDIFFFSTG--GPKPGYFMEMSMEDWEGAVKLLLYPAVY 122

Query: 172 VTQAVLPGMLKRKKGAIVNIGSGA 195
           +T+A++P M ++  G I+   S A
Sbjct: 123 LTRALVPAMERKGFGRIIYSTSVA 146

Length = 263

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 45.9 bits (109), Expect = 6e-06
 Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 37/196 (18%)

Query: 58  VTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD---KLK----DVSDSIQAKYAKTQIKSVV 110
           +TG + GIGK+ A + A+ G N+V+  +  +   KL       ++ I+A   K     V 
Sbjct: 8   ITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGKALPCIVD 67

Query: 111 VDFSGDLDEGVERIKEAIEGLDVGVLINNV-GISYPYARFFHEVDQVLLKN---LIKVNV 166
           +     +   VE+  E   G+D+  L+NN   IS              +K    ++ VN 
Sbjct: 68  IRDEDQVRAAVEKAVEKFGGIDI--LVNNASAIS------LTGTLDTPMKRYDLMMGVNT 119

Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY---SVYAATKAY-IDQFSRSL 222
            GT   ++A LP + K K   I+N+         S PL      +    AY + ++  S+
Sbjct: 120 RGTYLCSKACLPYLKKSKNPHILNL---------SPPLNLNPKWFKNHTAYTMAKYGMSM 170

Query: 223 YV-----EYRKSGIDV 233
            V     E++  GI V
Sbjct: 171 CVLGMAEEFKPGGIAV 186

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 45.8 bits (109), Expect = 7e-06
 Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 8/100 (8%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKY--AKTQIKSVV 110
           G  A+VTG +DG+G   A +LA  G  ++L  RN  K +    +I+     AK  +++  
Sbjct: 14  GKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRA-- 71

Query: 111 VDFSGDLDEGVERIKEAI--EGLDVGVLINNVGISYPYAR 148
           +D S  L   V  + E +  EG  + +LINN G+  P  R
Sbjct: 72  LDLS-SLAS-VAALGEQLRAEGRPIHLLINNAGVMTPPER 109

Length = 313

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 44.8 bits (106), Expect = 9e-06
 Identities = 46/176 (26%), Positives = 74/176 (42%), Gaps = 23/176 (13%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           AL+ G T GIG++ A  LA  G  L+L GR+   L  ++  + A        +   D + 
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGRDAGALAGLAAEVGA-------LARPADVAA 53

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVG--ISYPYARFF-HEVDQVLLKNLIKVNVEGTTKV 172
           +L+  V  + + +  LD  +L+   G  +  P AR       ++L  NL      G   V
Sbjct: 54  ELE--VWALAQELGPLD--LLVYAAGAILGKPLARTKPAAWRRILDANLT-----GAALV 104

Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
            +  L   L      +V +G+   +V    P  S YAA KA ++ +      E R 
Sbjct: 105 LKHALA--LLAAGARLVFLGAYPELV--MLPGLSAYAAAKAALEAYVEVARKEVRG 156

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 45.2 bits (107), Expect = 1e-05
 Identities = 30/146 (20%), Positives = 47/146 (32%), Gaps = 38/146 (26%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           ++TG   GIG + A  L   G  ++ +                            D   D
Sbjct: 3   VITGAASGIGAATAELLEDAGHTVIGIDLRE-----------------------ADVIAD 39

Query: 117 LD--EGVERIKEAIEGLDVGV---LINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
           L   EG       +     GV   L+N  G+              +   ++KVN  G   
Sbjct: 40  LSTPEGRAAAIADVLARCSGVLDGLVNCAGVGGT----------TVAGLVLKVNYFGLRA 89

Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAI 197
           + +A+LP + K    A V + S A  
Sbjct: 90  LMEALLPRLRKGHGPAAVVVSSIAGA 115

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 40/192 (20%), Positives = 77/192 (40%), Gaps = 17/192 (8%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           L+TG    IG +    + + G  ++    + + L ++ +S+  ++   ++  V +D +  
Sbjct: 8   LITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQ 67

Query: 117 LDEGVERIKEAIEGLDVGVLINN-VGISYP----YARFFHEVDQVLLKNLIKVNVEGTTK 171
             E +E              I+  V  +YP    Y + F +V        + +++  +  
Sbjct: 68  --ESLEEFLSKSAE--KYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFL 123

Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS--------VYAATKAYIDQFSRSLY 223
            +Q       K+  G +VNI S   +V P   +Y          YAA KA I   ++ L 
Sbjct: 124 FSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLTKYLA 183

Query: 224 VEYRKSGIDVQC 235
             ++ S I V C
Sbjct: 184 KYFKDSNIRVNC 195

Length = 256

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 43/184 (23%), Positives = 76/184 (41%), Gaps = 13/184 (7%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKY--AKTQIKSVVVDFS 114
           L+TG + G+G   A + A  G +L L  R  D+L+++   + A+Y   K  + ++ V+  
Sbjct: 6   LITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDH 65

Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGI--SYPYAR-FFHEVDQVLLKNLIKVNVEGTTK 171
             + E     ++ + GLD   +I N GI          F         N +    +    
Sbjct: 66  DQVFEVFAEFRDELGGLD--RVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQ---- 119

Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
             +A +    ++  G +V I S +A+        + YAA+KA +      L  E  K+ I
Sbjct: 120 -CEAAMEIFREQGSGHLVLISSVSAVRGLPGVK-AAYAASKAGVASLGEGLRAELAKTPI 177

Query: 232 DVQC 235
            V  
Sbjct: 178 KVST 181

Length = 248

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 9/192 (4%)

Query: 46  AKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQ 105
           A  LR      +VTG + GIG+       + G  +V   R     + + +S   +     
Sbjct: 2   ASGLRYADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQAL-ESELNRAGPGS 60

Query: 106 IKSVVVDFSGDLDEGVER-IKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIK 163
            K V  D + +  E ++  I   +E    +  L+NN G   P+     E      ++L+ 
Sbjct: 61  CKFVPCDVTKE--EDIKTLISVTVERFGRIDCLVNNAGWHPPHQTT-DETSAQEFRDLLN 117

Query: 164 VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
           +N+      ++  LP  L++ +G I+N+ S    +       + Y ATK  I   +++L 
Sbjct: 118 LNLISYFLASKYALP-HLRKSQGNIINLSSLVGSIGQKQA--APYVATKGAITAMTKALA 174

Query: 224 VEYRKSGIDVQC 235
           V+  + G+ V C
Sbjct: 175 VDESRYGVRVNC 186

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 10/98 (10%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  A+VTG   G+G   A  LA  G ++VL  RN DK K  +  I A      +    +D
Sbjct: 16  GRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELD 75

Query: 113 FSGDLDEGVERIKEAIEGLD-----VGVLINNVGISYP 145
            +  L      ++ A + L      + +LINN G+ Y 
Sbjct: 76  LT-SLAS----VRAAADALRAAYPRIDLLINNAGVMYT 108

Length = 306

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 37/175 (21%), Positives = 71/175 (40%), Gaps = 15/175 (8%)

Query: 64  GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS--GDLDEGV 121
            I  + A   A+ G  +VL    P        ++     +     + +D +   D+DE  
Sbjct: 7   SIAWAIAKAAAEEGAEVVLTTWPP---ALRMGAVDELAKELPADVIPLDVTSDEDIDELF 63

Query: 122 ERIKEAIEGLDVGVLINNVGISYPYARF---FHEVDQVLLKNLIKVNVEGTTKVTQAVLP 178
           E++KE    +D   L++++ +S P  R    + +  +      + ++      + +A  P
Sbjct: 64  EKVKEDGGKIDF--LVHSIAMS-PEIRKGKPYLDTSREGFLKALDISAYSFISLAKAAKP 120

Query: 179 GMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
            M   + G+IV +   AA  +   P Y      KA ++  +R L  E  + GI V
Sbjct: 121 LM--NEGGSIVALSYIAAERVF--PGYGGMGVAKAALESLARYLAYELGRKGIRV 171

Length = 239

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 44.1 bits (104), Expect = 2e-05
 Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 23/189 (12%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  A+VTG   G+G+  A  LA+ G +  +VG N  +  +  + + A     +  S+  D
Sbjct: 10  GKVAVVTGCDTGLGQGMALGLAEAGCD--IVGINIVEPTETIEQVTA--LGRRFLSLTAD 65

Query: 113 FSG--DLDEGVERIKEAIEGLDVGVLINNVG-ISYPYARFFHEVDQVLLKNLIKVNVEGT 169
                 +   +ER       +D  +L+NN G I    A  F E D     +++ +N++  
Sbjct: 66  LRKIDGIPALLERAVAEFGHID--ILVNNAGLIRREDAIEFSEKD---WDDVMNLNIKSV 120

Query: 170 TKVTQAVLPGMLKRKKGA-IVNIGS----GAAIVIPSDPLYSVYAATKAYIDQFSRSLYV 224
             ++QA     + +  G  I+NI S       I +PS      Y A+K+ +   +R +  
Sbjct: 121 FFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPS------YTASKSGVMGVTRLMAN 174

Query: 225 EYRKSGIDV 233
           E+ K  I+V
Sbjct: 175 EWAKHNINV 183

Length = 253

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 44.0 bits (104), Expect = 3e-05
 Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 10/178 (5%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           LVT  + GIG + A +L K G  +V+  RN + L+     ++      ++ +V  D S D
Sbjct: 4   LVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELK---EYGEVYAVKADLS-D 59

Query: 117 LDEGVERIKEAIEGLD-VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
            D+    +KEA E L  +  L+ N G         HE           +++     +T  
Sbjct: 60  KDDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTL 119

Query: 176 VLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYA-ATKAYIDQFSRSLYVEYRKSGI 231
           ++   L++K KG +V + S  ++  P  PL  V A  T+A + Q ++ +   Y   GI
Sbjct: 120 LIQAWLEKKMKGVLVYLSS-VSVKEPMPPL--VLADVTRAGLVQLAKGVSRTYGGKGI 174

Length = 259

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 43.4 bits (103), Expect = 4e-05
 Identities = 52/211 (24%), Positives = 86/211 (40%), Gaps = 53/211 (25%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN--PD-KLK----DVSDSIQAKYAKTQ 105
           G    +TG + GIG + A + A+ G N+V+  +   P  KL       ++ I+A  A  Q
Sbjct: 6   GKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEA--AGGQ 63

Query: 106 IKSVVVDFSGDLDEGVER-IKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKN- 160
              +V D     ++ V   + +A+E   G+D  + +NN       A      +   +K  
Sbjct: 64  ALPLVGDVRD--EDQVAAAVAKAVERFGGID--ICVNNAS-----AINLTGTEDTPMKRF 114

Query: 161 --LIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL---------YSVYA 209
             + ++NV GT  V+QA LP + K +   I+ +         S PL         ++ Y 
Sbjct: 115 DLMQQINVRGTFLVSQACLPHLKKSENPHILTL---------SPPLNLDPKWFAPHTAYT 165

Query: 210 ATKAYIDQFSRSLYV-----EYRKSGIDVQC 235
             K     +  SL       E+R  GI V  
Sbjct: 166 MAK-----YGMSLCTLGLAEEFRDDGIAVNA 191

Length = 273

>gnl|CDD|133446 cd01078, NAD_bind_H4MPT_DH, NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

 Score = 42.4 bits (100), Expect = 6e-05
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 8/81 (9%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  A+V G T  +G+  A  LA+ G  +VLVGR+ ++ +  +DS++A++        V  
Sbjct: 28  GKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF-----GEGVGA 82

Query: 113 FSGDLDEGVERIKEAIEGLDV 133
                D    R   AI+G DV
Sbjct: 83  VETSDDA--ARA-AAIKGADV 100

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 194

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 42.6 bits (101), Expect = 7e-05
 Identities = 50/184 (27%), Positives = 76/184 (41%), Gaps = 22/184 (11%)

Query: 58  VTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDL 117
           +TG + GIG++ A + A+ G  L LV R  D L+  +  +    A+  + +  V  +  L
Sbjct: 7   ITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA-ARVSVYAADVRDADAL 65

Query: 118 DEGVERIKEAIEGLDVGVLINNVGIS-------YPYARFFHEVDQVLLKNLIKVNVEGTT 170
                    A    DV  +I N GIS             F EV        +  N  G  
Sbjct: 66  AAAAADFIAAHGLPDV--VIANAGISVGTLTEEREDLAVFREV--------MDTNYFGMV 115

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
              Q  +  M   ++G +V I S A +  +P    YS   A+KA   ++  SL VE R +
Sbjct: 116 ATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYS---ASKAAAIKYLESLRVELRPA 172

Query: 230 GIDV 233
           G+ V
Sbjct: 173 GVRV 176

Length = 257

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 47/178 (26%), Positives = 82/178 (46%), Gaps = 19/178 (10%)

Query: 64  GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS--GDLDEGV 121
           GIG + A +  + G  +V+   +  +L + +D + A+    ++++VV D +    +D  +
Sbjct: 29  GIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALI 88

Query: 122 ERIKEAIEGLDVGVLINNVGI--SYPYARFF-HEVDQVLLKNLIKVNVEGTTKVTQAVLP 178
           +   E +  LDV  L+NN G+    P       E  +VL      V + GT + T+A L 
Sbjct: 89  DAAVERLGRLDV--LVNNAGLGGQTPVVDMTDDEWSRVL-----DVTLTGTFRATRAALR 141

Query: 179 GMLKRK-KGAIVNIGSGAAIVI--PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
            M  R   G IVN  S    V+   +    + YAA KA +   +R   +E  + G+ +
Sbjct: 142 YMRARGHGGVIVNNAS----VLGWRAQHGQAHYAAAKAGVMALTRCSALEAAEYGVRI 195

Length = 262

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 41.5 bits (97), Expect = 2e-04
 Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 21/167 (12%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           LVTG + G+G+  A   A  G  ++LV R+  KL+ V D+I       +  ++  D    
Sbjct: 10  LVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEA-GHPEPFAIRFDLMSA 68

Query: 117 LDEGVER----IKEAIEG-LDVGVLINNVGISYPYARFFH---EVDQVLLK--NLIKVNV 166
            ++  E+    I EA +G LD        GI +    F+       Q + +  N  ++N 
Sbjct: 69  EEKEFEQFAATIAEATQGKLD--------GIVHCAGYFYALSPLDFQTVAEWVNQYRINT 120

Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKA 213
                +T+A+ P +LK+   A V I  G +        +  + A+KA
Sbjct: 121 VAPMGLTRALFP-LLKQSPDASV-IFVGESHGETPKAYWGGFGASKA 165

Length = 239

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 16/95 (16%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  A+VTG   G+G      LA+ G ++++  R PD          A+ A   I  V V 
Sbjct: 26  GKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDV---------AREALAGIDGVEVV 76

Query: 113 FS--GDLD---EGVERIKEAIEGLDVGVLINNVGI 142
                DL+      ER  ++   +D  +LINN G+
Sbjct: 77  MLDLADLESVRAFAERFLDSGRRID--ILINNAGV 109

Length = 315

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 45/180 (25%), Positives = 70/180 (38%), Gaps = 14/180 (7%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           L+ G T  I ++ A + A  G  L L  R+ ++L+ ++D ++A+ A   + +  +D   D
Sbjct: 5   LIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGA-VAVSTHELDIL-D 62

Query: 117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAV 176
                  +       D+ VLI  VG     A    +    L     + N EG   +   +
Sbjct: 63  TASHAAFLDSLPALPDI-VLI-AVGTLGDQAACEADPALALR--EFRTNFEGPIALLTLL 118

Query: 177 LPGMLKRKKGAIVNIGSGAAIVIPSD---PLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
                 R  G IV I S A      D       VY + KA +  F   L     KSG+ V
Sbjct: 119 ANRFEARGSGTIVGISSVAG-----DRGRASNYVYGSAKAALTAFLSGLRNRLFKSGVHV 173

Length = 243

>gnl|CDD|236326 PRK08655, PRK08655, prephenate dehydrogenase; Provisional

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 4/74 (5%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSV----VVD 112
            + G T G+GK FA  L + G  +++ GR+P K K+V+  +  +YA   I +     +V 
Sbjct: 4   SIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEYANDNIDAAKDADIVI 63

Query: 113 FSGDLDEGVERIKE 126
            S  ++   + IKE
Sbjct: 64  ISVPINVTEDVIKE 77

Length = 437

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 41.1 bits (96), Expect = 3e-04
 Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 11/184 (5%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  A++TG   GIG +   + A+ G  +VL   +   L+   + ++A+     +  V+ D
Sbjct: 6   GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE--GFDVHGVMCD 63

Query: 113 FSGDLDEGVERIKEAIEGL-DVGVLINNVGI--SYPYARFFHEVDQVLLKNLIKVNVEGT 169
                +E      EA   L  V V+ +N GI    P     H+      + +I V++ G+
Sbjct: 64  VR-HREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDD----WRWVIDVDLWGS 118

Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
               +A LP +L++  G  V   +  A ++P+  L   Y   K  +   + +L  E    
Sbjct: 119 IHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGL-GAYGVAKYGVVGLAETLAREVTAD 177

Query: 230 GIDV 233
           GI V
Sbjct: 178 GIGV 181

Length = 275

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 40.3 bits (94), Expect = 4e-04
 Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 14/184 (7%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           LVTG + GIG++ A +LA  G  + +         + V  +IQA+    +    ++ F  
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNAR----LLQFDV 57

Query: 116 DLDEGVERIKEA-IE--GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
                   + EA I   G   GV++ N GI+   A  F  + +     +I  N++G   V
Sbjct: 58  ADRVACRTLLEADIAEHGAYYGVVL-NAGITRDAA--FPALSEEDWDIVIHTNLDGFYNV 114

Query: 173 TQ-AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
                +P +  R+ G I+ + S + ++     +   Y+A KA +   +++L VE  K  I
Sbjct: 115 IHPCTMPMIRARQGGRIITLASVSGVMGNRGQVN--YSAAKAGLIGATKALAVELAKRKI 172

Query: 232 DVQC 235
            V C
Sbjct: 173 TVNC 176

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 40.2 bits (94), Expect = 5e-04
 Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 12/183 (6%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNL-VLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           L+TG + GIG++ A   A  G ++ +   R+    ++ +D+++A  A  +   V  D + 
Sbjct: 6   LITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRA--AGGRACVVAGDVAN 63

Query: 116 DLD--EGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
           + D     + ++ A   LD   L+NN GI  P +    ++D   L+ +   NV G     
Sbjct: 64  EADVIAMFDAVQSAFGRLD--ALVNNAGIVAP-SMPLADMDAARLRRMFDTNVLGAYLCA 120

Query: 174 QAVLPGMLKRK---KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
           +     +   +    GAIVN+ S A+  + S   Y  YA +K  +D  +  L  E    G
Sbjct: 121 REAARRLSTDRGGRGGAIVNVSSIAS-RLGSPNEYVDYAGSKGAVDTLTLGLAKELGPHG 179

Query: 231 IDV 233
           + V
Sbjct: 180 VRV 182

Length = 248

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 39.2 bits (92), Expect = 0.001
 Identities = 48/186 (25%), Positives = 76/186 (40%), Gaps = 25/186 (13%)

Query: 55  WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSD----SIQAKYAKTQIKSVV 110
             L+TG + GIG   A  L   G  +    R  + +  +      + Q  YA+ +     
Sbjct: 6   SILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPE----- 60

Query: 111 VDFSGDLDEGVERIKEAIEG-LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
                 +   V ++ E   G LD   L NN     P A    ++    L+   + N  G 
Sbjct: 61  -----SIAALVAQVLELSGGRLDA--LFNNGAYGQPGA--VEDLPTEALRAQFEANFFGW 111

Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL--YSVYAATKAYIDQFSRSLYVEYR 227
             +T+ V+P M K+ +G IV   S   +V    P+     Y A+K  I+  S +L +E +
Sbjct: 112 HDLTRRVIPVMRKQGQGRIVQCSSILGLV----PMKYRGAYNASKFAIEGLSLTLRMELQ 167

Query: 228 KSGIDV 233
            SGI V
Sbjct: 168 GSGIHV 173

Length = 277

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 38.6 bits (90), Expect = 0.001
 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 14/92 (15%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVV-DFSG 115
            +TG +DG+G + A  L   G  +VL  R+  +  D       K A      V++ D S 
Sbjct: 11  FITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADA------KAACPGAAGVLIGDLS- 63

Query: 116 DLDEGVERIKE---AIEGLDVGVLINNVGISY 144
            L E   ++ +   AI   D   +I+N GI  
Sbjct: 64  SLAE-TRKLADQVNAIGRFD--AVIHNAGILS 92

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 56/181 (30%), Positives = 78/181 (43%), Gaps = 35/181 (19%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVL--VGRNPDKLKDVSDSIQAKYAKTQIKSVV 110
           G  A+VTG   G+G++ A  LA+ G  +V+  V    D   DV D I+A  AK       
Sbjct: 12  GKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDA-SDVLDEIRAAGAK------A 64

Query: 111 VDFSGDL------DEGVERIKEAIEGLDVGVLINNVGISYPYARFF---HEVDQVLLKNL 161
           V  +GD+      DE V      + GLD  +++NN GI+     F     E D V     
Sbjct: 65  VAVAGDISQRATADELVA-TAVGLGGLD--IVVNNAGITRDRMLFNMSDEEWDAV----- 116

Query: 162 IKVNVEGTTKVTQAVLPGMLKRKK-------GAIVNIGSGAAIVIPSDPLYSVYAATKAY 214
           I V++ G   +T+        + K       G IVN  S A +V P     + Y A KA 
Sbjct: 117 IAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQ--ANYGAAKAG 174

Query: 215 I 215
           I
Sbjct: 175 I 175

Length = 306

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 37.3 bits (87), Expect = 0.002
 Identities = 22/92 (23%), Positives = 35/92 (38%), Gaps = 11/92 (11%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL---------KDVSDSIQAKYAKTQIK 107
            V G T   G+    +L   G  +  + RNP K          KD+ D      A   + 
Sbjct: 2   AVIGATGKTGRRLVKELLARGHQVTALSRNPSKAPAPGVTPVQKDLFDLADLAEALAGVD 61

Query: 108 SVVVDFSGDLD--EGVERIKEAIEGLDVGVLI 137
           +VV  F    D  +GV+ + +A     V  ++
Sbjct: 62  AVVDAFGARPDDSDGVKHLLDAAARAGVRRIV 93

Length = 182

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 37.8 bits (88), Expect = 0.003
 Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 2/91 (2%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G   ++TG   GIGK  A +LA+ G  +++  R+  K ++ +  I+      ++    +D
Sbjct: 1   GKTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLD 60

Query: 113 FSGDLDEGVERIKEAIEGLD-VGVLINNVGI 142
            +  L        E +   D + VLINN G+
Sbjct: 61  LA-SLKSIRAFAAEFLAEEDRLDVLINNAGV 90

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score = 37.7 bits (88), Expect = 0.004
 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 13/95 (13%)

Query: 51  KYGSWALVTGPTDGIGKSFAFQLAK-TGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSV 109
           K G   LV G   G+G S A QLAK  G  +V V  + +K          +  K      
Sbjct: 141 KPGETVLVHGAAGGVG-SAAIQLAKALGATVVAVVSSSEK---------LELLKELGADH 190

Query: 110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISY 144
           V+++    ++ VE+++E   G  V V+++ VG   
Sbjct: 191 VINY--REEDFVEQVRELTGGKGVDVVLDTVGGDT 223

Length = 326

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 37.0 bits (86), Expect = 0.004
 Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 14/179 (7%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG- 115
            + G ++G+G + A+   K G  + +  RN +KLK +  ++ +KY    I  VV D S  
Sbjct: 9   AIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTL-SKYGN--IHYVVGDVSST 65

Query: 116 -DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
                 +E+  + +  +D G+++   G        F  +++ +L N IK+ +        
Sbjct: 66  ESARNVIEKAAKVLNAID-GLVVTVGGYVEDTVEEFSGLEE-MLTNHIKIPL----YAVN 119

Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           A L  +  ++  +IV + S + I   S P    YA  KA + +    L  E    GI V
Sbjct: 120 ASLRFL--KEGSSIVLVSSMSGIYKAS-PDQLSYAVAKAGLAKAVEILASELLGRGIRV 175

Length = 238

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 37.2 bits (86), Expect = 0.004
 Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 5/99 (5%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G   ++TG   GIG   A   A  G +++L  RN  +       I  ++ K +++++ +D
Sbjct: 1   GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLD 60

Query: 113 FSGDLDEGVERIKEAIEG--LDVGVLINNVGI-SYPYAR 148
            +      V+R  EA +     + VL+ N  + + P+  
Sbjct: 61  LA--SLRSVQRFAEAFKAKNSPLHVLVCNAAVFALPWTL 97

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	255
PLN02780	320	ketoreductase/ oxidoreductase	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	100.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK07774	250	short chain dehydrogenase; Provisional	99.98
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK06101	240	short chain dehydrogenase; Provisional	99.98
PRK07201	657	short chain dehydrogenase; Provisional	99.98
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.98
PRK12744	257	short chain dehydrogenase; Provisional	99.98
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK12937	245	short chain dehydrogenase; Provisional	99.98
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.98
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.98
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.98
PRK06482	276	short chain dehydrogenase; Provisional	99.98
COG1028	251	FabG Dehydrogenases with different specificities (	99.98
PRK10538	248	malonic semialdehyde reductase; Provisional	99.98
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.98
PRK07775	274	short chain dehydrogenase; Provisional	99.98
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.98
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.98
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.98
PRK06123	248	short chain dehydrogenase; Provisional	99.97
PRK12742	237	oxidoreductase; Provisional	99.97
PRK12746	254	short chain dehydrogenase; Provisional	99.97
PRK09291	257	short chain dehydrogenase; Provisional	99.97
PRK08177	225	short chain dehydrogenase; Provisional	99.97
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.97
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.97
PRK09134	258	short chain dehydrogenase; Provisional	99.97
PRK06198	260	short chain dehydrogenase; Provisional	99.97
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.97
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.97
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.97
PRK06924	251	short chain dehydrogenase; Provisional	99.97
PRK07578	199	short chain dehydrogenase; Provisional	99.97
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK06181	263	short chain dehydrogenase; Provisional	99.97
PRK12827	249	short chain dehydrogenase; Provisional	99.97
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.97
PRK07023	243	short chain dehydrogenase; Provisional	99.97
PRK07326	237	short chain dehydrogenase; Provisional	99.97
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK07577	234	short chain dehydrogenase; Provisional	99.97
PRK07074	257	short chain dehydrogenase; Provisional	99.97
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.97
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.97
PRK08264	238	short chain dehydrogenase; Validated	99.97
PRK07060	245	short chain dehydrogenase; Provisional	99.97
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.97
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK07041	230	short chain dehydrogenase; Provisional	99.96
PRK12828	239	short chain dehydrogenase; Provisional	99.96
PRK08324	681	short chain dehydrogenase; Validated	99.96
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.96
PRK12367	245	short chain dehydrogenase; Provisional	99.96
PRK12829	264	short chain dehydrogenase; Provisional	99.96
PRK08017	256	oxidoreductase; Provisional	99.96
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK06953	222	short chain dehydrogenase; Provisional	99.96
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK09135	249	pteridine reductase; Provisional	99.96
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.96
PRK07806	248	short chain dehydrogenase; Provisional	99.95
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.94
PRK08219	227	short chain dehydrogenase; Provisional	99.93
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.93
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.92
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.92
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.91
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.9
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.9
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.88
PLN03209	576	translocon at the inner envelope of chloroplast su	99.87
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.87
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.85
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.83
PRK06720	169	hypothetical protein; Provisional	99.81
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.8
PLN02653	340	GDP-mannose 4,6-dehydratase	99.8
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.79
PLN02572	442	UDP-sulfoquinovose synthase	99.78
PLN02583	297	cinnamoyl-CoA reductase	99.78
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.78
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.77
PLN02650	351	dihydroflavonol-4-reductase	99.77
PLN00198	338	anthocyanidin reductase; Provisional	99.76
PLN02240	352	UDP-glucose 4-epimerase	99.75
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.75
PLN02214	342	cinnamoyl-CoA reductase	99.75
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.75
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.74
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.73
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.72
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.71
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.71
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.71
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.69
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.68
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.67
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.66
PLN02686	367	cinnamoyl-CoA reductase	99.66
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.64
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.62
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.6
PLN02427	386	UDP-apiose/xylose synthase	99.6
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.6
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.59
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.57
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.56
PLN02260	668	probable rhamnose biosynthetic enzyme	99.56
PLN02206	442	UDP-glucuronate decarboxylase	99.56
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.56
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.55
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.53
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.53
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.52
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.51
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.51
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.51
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.51
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.49
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.46
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.45
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.41
PRK07201	657	short chain dehydrogenase; Provisional	99.4
CHL00194	317	ycf39 Ycf39; Provisional	99.39
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.39
PLN02996	491	fatty acyl-CoA reductase	99.34
PRK05865	854	hypothetical protein; Provisional	99.29
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.26
PLN02778	298	3,5-epimerase/4-reductase	99.24
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.23
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.21
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.16
PLN02503	605	fatty acyl-CoA reductase 2	99.14
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.11
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.04
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.04
PLN02260	668	probable rhamnose biosynthetic enzyme	99.01
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	98.96
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	98.91
PLN00016	378	RNA-binding protein; Provisional	98.89
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.87
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	98.86
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.8
PRK08309	177	short chain dehydrogenase; Provisional	98.79
PRK12320	699	hypothetical protein; Provisional	98.75
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.72
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.7
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.7
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.65
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.63
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.57
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.53
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.48
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.46
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.36
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.31
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.25
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.2
PRK09620	229	hypothetical protein; Provisional	98.17
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.15
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	98.11
COG2910	211	Putative NADH-flavin reductase [General function p	98.09
PLN00106	323	malate dehydrogenase	98.09
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.98
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.94
PTZ00325	321	malate dehydrogenase; Provisional	97.92
PRK14982	340	acyl-ACP reductase; Provisional	97.91
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.89
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	97.88
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.88
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.82
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.8
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	97.8
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.79
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.78
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.74
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.7
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.68
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.67
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.61
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.59
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	97.56
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.55
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.55
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.52
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.49
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.47
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	97.46
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.45
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.4
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.4
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.39
PRK06849	389	hypothetical protein; Provisional	97.36
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.33
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.31
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.31
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.3
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.3
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.28
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	97.28
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.28
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.24
COG2130	340	Putative NADP-dependent oxidoreductases [General f	97.23
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	97.22
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	97.22
PRK05086	312	malate dehydrogenase; Provisional	97.21
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.2
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.2
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.17
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	97.17
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	97.16
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.15
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.14
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.09
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.09
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.08
KOG2774	366	consensus NAD dependent epimerase [General functio	97.06
PRK14968	188	putative methyltransferase; Provisional	97.05
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	97.02
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.02
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.01
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.99
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	96.99
COG3268	382	Uncharacterized conserved protein [Function unknow	96.97
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	96.97
PRK08223	287	hypothetical protein; Validated	96.96
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.96
PRK12480	330	D-lactate dehydrogenase; Provisional	96.95
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.95
PLN02928	347	oxidoreductase family protein	96.93
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.92
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.89
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.88
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.85
PRK13243	333	glyoxylate reductase; Reviewed	96.85
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.84
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.84
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.83
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.83
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.82
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.82
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.79
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	96.79
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.77
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.75
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.74
PLN02740	381	Alcohol dehydrogenase-like	96.72
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.72
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	96.7
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.69
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.68
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.67
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.65
PRK06487	317	glycerate dehydrogenase; Provisional	96.64
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.62
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.6
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.6
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	96.6
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	96.59
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	96.57
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.56
PRK06436	303	glycerate dehydrogenase; Provisional	96.56
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	96.56
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.56
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.55
PTZ00354	334	alcohol dehydrogenase; Provisional	96.51
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.5
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.5
PRK07411	390	hypothetical protein; Validated	96.49
PRK08328	231	hypothetical protein; Provisional	96.48
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	96.47
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.45
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	96.45
PRK07574	385	formate dehydrogenase; Provisional	96.44
PLN03139	386	formate dehydrogenase; Provisional	96.44
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	96.42
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	96.42
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	96.41
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.41
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.4
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.39
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	96.38
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	96.37
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.37
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.37
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	96.35
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	96.34
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	96.34
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.33
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	96.33
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.3
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	96.29
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	96.29
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.28
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	96.26
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	96.25
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	96.25
PRK04148	134	hypothetical protein; Provisional	96.24
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	96.22
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.22
PRK06932	314	glycerate dehydrogenase; Provisional	96.22
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.21
PLN02494	477	adenosylhomocysteinase	96.21
PRK08655	437	prephenate dehydrogenase; Provisional	96.21
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.2
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.18
PLN02827	378	Alcohol dehydrogenase-like	96.17
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.17
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.14
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	96.11
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.1
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.1
PLN00203	519	glutamyl-tRNA reductase	96.1
PLN02602	350	lactate dehydrogenase	96.06
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	96.05
PRK14851	679	hypothetical protein; Provisional	96.02
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	95.98
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.98
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	95.97
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	95.96
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	95.95
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.95
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.93
PRK07877	722	hypothetical protein; Provisional	95.91
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	95.91
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.9
PTZ00117	319	malate dehydrogenase; Provisional	95.9
PRK05442	326	malate dehydrogenase; Provisional	95.9
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	95.89
PRK09496	453	trkA potassium transporter peripheral membrane com	95.89
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	95.88
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	95.88
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.87
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.86
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	95.85
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	95.85
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	95.85
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.85
PRK11790	409	D-3-phosphoglycerate dehydrogenase; Provisional	95.83
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.79
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	95.79
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	95.78
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	95.76
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.75
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	95.74
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	95.74
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	95.74
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	95.74
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.73
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	95.72
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	95.72
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	95.7
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	95.69
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	95.69

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=1.5e-47  Score=330.09  Aligned_cols=247  Identities=83%  Similarity=1.293  Sum_probs=223.4

Q ss_pred             CccchhhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcccccCCcEEEEECCCCchHHHHHHHHHHcCCcE
Q 025260            1 MESCFLNTLKTQPLWLLALFTIGSLSVLRLAFVILNWVYVNFLRPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNL   80 (255)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V   80 (255)
                      |+=||+..+.++|+|+++++.+|.+.++..++.++.+++..+.+|.++++.+|++++||||++|||+++|++|+++|++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~lITGAs~GIG~alA~~La~~G~~V   80 (320)
T PLN02780          1 MELCFVDKLKSQPLWLLVLFVLGSLSILKFFFTILNWVYVYFLRPAKNLKKYGSWALVTGPTDGIGKGFAFQLARKGLNL   80 (320)
T ss_pred             CchhHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCEEEEeCCCcHHHHHHHHHHHHCCCCE
Confidence            67789999999999999999999999999999999999988887877776679999999999999999999999999999


Q ss_pred             EEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHh
Q 025260           81 VLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKN  160 (255)
Q Consensus        81 ~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~  160 (255)
                      ++++|+++++++..+++++.+++.++..+.+|+++++.+.++++.+.+++.|+|++|||||+..+...++.+.+.+++++
T Consensus        81 il~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~  160 (320)
T PLN02780         81 VLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKN  160 (320)
T ss_pred             EEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHH
Confidence            99999999999999998877656678889999997777888889888888889999999998754334577889999999


Q ss_pred             HhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeee
Q 025260          161 LIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFL  240 (255)
Q Consensus       161 ~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~  240 (255)
                      ++++|+.|++.+++.++|.|++++.|+||++||.++...++.|....|++||+|+++|+++|+.|++++||+|++++||+
T Consensus       161 ~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~  240 (320)
T PLN02780        161 LIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLY  240 (320)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCc
Confidence            99999999999999999999988899999999998864223577899999999999999999999999999999999999


Q ss_pred             eeeCCcc
Q 025260          241 LCFYNLN  247 (255)
Q Consensus       241 v~T~~~~  247 (255)
                      ++|+|.+
T Consensus       241 v~T~~~~  247 (320)
T PLN02780        241 VATKMAS  247 (320)
T ss_pred             eecCccc
Confidence            9999976

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=7e-45  Score=298.68  Aligned_cols=195  Identities=26%  Similarity=0.353  Sum_probs=178.8

Q ss_pred             CCcccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHH
Q 025260           45 PAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVE  122 (255)
Q Consensus        45 ~~~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~  122 (255)
                      |.+..+.+|++||||||++|+|+++|.+||++|+++++.|.|.+..+++.+++++.+   +++.+.||+++  ++.+.++
T Consensus        30 ~~~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g---~~~~y~cdis~~eei~~~a~  106 (300)
T KOG1201|consen   30 PKPLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG---EAKAYTCDISDREEIYRLAK  106 (300)
T ss_pred             ccchhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC---ceeEEEecCCCHHHHHHHHH
Confidence            334556779999999999999999999999999999999999999999999998762   78899999997  4677889


Q ss_pred             HHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC
Q 025260          123 RIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD  202 (255)
Q Consensus       123 ~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~  202 (255)
                      ++++++|  ++|+||||||+...  .++.+.+++++++++++|+.|+++++|+|+|.|.++++|+||+++|.+|..  +.
T Consensus       107 ~Vk~e~G--~V~ILVNNAGI~~~--~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~--g~  180 (300)
T KOG1201|consen  107 KVKKEVG--DVDILVNNAGIVTG--KKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLF--GP  180 (300)
T ss_pred             HHHHhcC--CceEEEeccccccC--CCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhccc--CC
Confidence            9999888  56699999999865  668899999999999999999999999999999999999999999999999  77


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHcc---CCceEEEeeeeeeeeCCcch
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRK---SGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~---~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++..+|++||+|+.+|+++|+.|++.   .||+...|+|++++|+|.+.
T Consensus       181 ~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~  229 (300)
T KOG1201|consen  181 AGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG  229 (300)
T ss_pred             ccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC
Confidence            99999999999999999999999963   57999999999999999985

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.5e-45  Score=301.88  Aligned_cols=194  Identities=32%  Similarity=0.423  Sum_probs=175.4

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      ++.||+|+|||||+|||+++|++|+++|++++++.|..++++...+++++..+..+++.+++|++|  ++.++++.+.+.
T Consensus         9 ~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~   88 (282)
T KOG1205|consen    9 RLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRH   88 (282)
T ss_pred             HhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHh
Confidence            466999999999999999999999999999999999999999999999988765579999999998  457777888888


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++++|  +||||||+...  ...++.+.++++++|++|++|++.++|+++|+|++++.|+||++||++|..  +.|....
T Consensus        89 fg~vD--vLVNNAG~~~~--~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~--~~P~~~~  162 (282)
T KOG1205|consen   89 FGRVD--VLVNNAGISLV--GFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKM--PLPFRSI  162 (282)
T ss_pred             cCCCC--EEEecCccccc--cccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccccc--CCCcccc
Confidence            88655  99999999873  567888999999999999999999999999999998889999999999999  7788889


Q ss_pred             chHHHHHHHHHHHHHHHHHccCC--ceEEEeeeeeeeeCCcchhh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSG--IDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~g--i~v~~v~Pg~v~T~~~~~~~  250 (255)
                      |++||+|+.+|+++|++|+.+.+  |++ +|+||+|+|++.....
T Consensus       163 Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~~  206 (282)
T KOG1205|consen  163 YSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKEL  206 (282)
T ss_pred             cchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchhh
Confidence            99999999999999999999887  555 9999999999766544

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=2.1e-44  Score=296.28  Aligned_cols=190  Identities=34%  Similarity=0.533  Sum_probs=175.0

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .++++++|||||+|||+++|++|+++|++|++++|+++++++..++++..+ +..+.++.+|+++.  +.++++.+++..
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~-~v~v~vi~~DLs~~--~~~~~l~~~l~~   80 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT-GVEVEVIPADLSDP--EALERLEDELKE   80 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh-CceEEEEECcCCCh--hHHHHHHHHHHh
Confidence            348999999999999999999999999999999999999999999999877 77899999999986  444555544432


Q ss_pred             --CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          131 --LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       131 --~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                        .++|+||||||....  +++.+.++++.++++++|+.+...++++++|.|.+++.|+|||++|.+|+.  |.|..+.|
T Consensus        81 ~~~~IdvLVNNAG~g~~--g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~--p~p~~avY  156 (265)
T COG0300          81 RGGPIDVLVNNAGFGTF--GPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLI--PTPYMAVY  156 (265)
T ss_pred             cCCcccEEEECCCcCCc--cchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcC--CCcchHHH
Confidence              368899999999865  679999999999999999999999999999999999999999999999999  88999999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      ++||+++.+|+++|+.|++++||+|.+|+||+++|++++
T Consensus       157 ~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~  195 (265)
T COG0300         157 SATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD  195 (265)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc
Confidence            999999999999999999999999999999999999997

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=4.9e-43  Score=280.71  Aligned_cols=191  Identities=32%  Similarity=0.461  Sum_probs=173.3

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      .++|+++|||||||||.++|++|++.|++|++++|+.+++++..+++.+    ..+.....|++|.  ++++++.+.+++
T Consensus         4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~----~~~~~~~~DVtD~~~~~~~i~~~~~~~   79 (246)
T COG4221           4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA----GAALALALDVTDRAAVEAAIEALPEEF   79 (246)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc----CceEEEeeccCCHHHHHHHHHHHHHhh
Confidence            4589999999999999999999999999999999999999999988854    4688899999984  566777788888


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++  +|+||||||....  .++.+.+.++|++++++|+.|.++.+++++|.|.+++.|+|||+||++|..  +.|+...|
T Consensus        80 g~--iDiLvNNAGl~~g--~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~--~y~~~~vY  153 (246)
T COG4221          80 GR--IDILVNNAGLALG--DPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRY--PYPGGAVY  153 (246)
T ss_pred             Cc--ccEEEecCCCCcC--ChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccc--cCCCCccc
Confidence            85  5599999999864  679999999999999999999999999999999999999999999999999  88999999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhhh
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLVM  251 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~  251 (255)
                      +++|+|+.+|++.|++|+..++|||..|+||.+.|..+..+..
T Consensus       154 ~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~  196 (246)
T COG4221         154 GATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRF  196 (246)
T ss_pred             hhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccC
Confidence            9999999999999999999999999999999998765555443

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=100.00  E-value=6.1e-41  Score=276.35  Aligned_cols=227  Identities=43%  Similarity=0.697  Sum_probs=200.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhc------cCCcccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHH
Q 025260           18 ALFTIGSLSVLRLAFVILNWVYVNFL------RPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK   91 (255)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~   91 (255)
                      .+..++.+.+..+++.+++.++..+.      +|....+..|+|++||||+.|||++.|++||++|++|++++|++++++
T Consensus         8 ~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~   87 (312)
T KOG1014|consen    8 FLTLVGALVVSYVLYRVLRTIYNILKAYVFGVRPKDLKEKLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLE   87 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHeeeeeecchHHhcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            34445555666666665555443221      343444456899999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHH
Q 025260           92 DVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK  171 (255)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~  171 (255)
                      .+.+|+.+.++ ..+..+.+|++++.. ..+++.+.+.+.|+.+||||+|+..+.+..+.+.+.+.+++.+++|..+...
T Consensus        88 ~v~kEI~~~~~-vev~~i~~Dft~~~~-~ye~i~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~  165 (312)
T KOG1014|consen   88 AVAKEIEEKYK-VEVRIIAIDFTKGDE-VYEKLLEKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTL  165 (312)
T ss_pred             HHHHHHHHHhC-cEEEEEEEecCCCch-hHHHHHHHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHH
Confidence            99999999985 889999999998644 7899999999999999999999998777889999998999999999999999


Q ss_pred             HHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       172 l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      +++.++|.|.++++|-||++||.++..  |.|.++.|++||++++.|+++|+.|++++||.|.++.|++|.|+|..-
T Consensus       166 ~t~~ilp~M~~r~~G~IvnigS~ag~~--p~p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~  240 (312)
T KOG1014|consen  166 LTQLILPGMVERKKGIIVNIGSFAGLI--PTPLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKY  240 (312)
T ss_pred             HHHHhhhhhhcCCCceEEEeccccccc--cChhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheecccccc
Confidence            999999999999999999999999999  899999999999999999999999999999999999999999999764

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-39  Score=270.32  Aligned_cols=193  Identities=22%  Similarity=0.327  Sum_probs=168.7

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      ++++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++..+.+|++|.  +++.++++. 
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~-   81 (263)
T PRK08339          4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTVKELK-   81 (263)
T ss_pred             cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHHH-
Confidence            44679999999999999999999999999999999999999888888776543 34678899999984  355555553 


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .++  ++|++|||||....  .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||.++..  +.+...
T Consensus        82 ~~g--~iD~lv~nag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~--~~~~~~  155 (263)
T PRK08339         82 NIG--EPDIFFFSTGGPKP--GYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKE--PIPNIA  155 (263)
T ss_pred             hhC--CCcEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccC--CCCcch
Confidence            345  46699999998643  557889999999999999999999999999999888889999999999877  678889


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .|+++|+|+.+|+++|+.|++++||+||+|+||+++|+|.++.
T Consensus       156 ~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~  198 (263)
T PRK08339        156 LSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQL  198 (263)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHH
Confidence            9999999999999999999999999999999999999987643

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=1.7e-38  Score=262.05  Aligned_cols=190  Identities=24%  Similarity=0.291  Sum_probs=172.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      +..+|.|+|||+.+|+|+.+|++|.++|++|++.+.+++..++...+.+    +.+...+..|+++  +++++.+.+++.
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~----s~rl~t~~LDVT~~esi~~a~~~V~~~  101 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK----SPRLRTLQLDVTKPESVKEAAQWVKKH  101 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc----CCcceeEeeccCCHHHHHHHHHHHHHh
Confidence            4568999999999999999999999999999999999888887777664    4567778999997  468888888888


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++..++.||||||+... .++.+..+.+++++++++|++|++.+++.++|.+ ++.+||||++||+.|..  +.|..++
T Consensus       102 l~~~gLwglVNNAGi~~~-~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLl-r~arGRvVnvsS~~GR~--~~p~~g~  177 (322)
T KOG1610|consen  102 LGEDGLWGLVNNAGISGF-LGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLL-RRARGRVVNVSSVLGRV--ALPALGP  177 (322)
T ss_pred             cccccceeEEeccccccc-cCccccccHHHHHHHHhhhhhhHHHHHHHHHHHH-HhccCeEEEecccccCc--cCccccc
Confidence            888789999999998754 3668889999999999999999999999999955 55679999999999998  8899999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      |++||+|++.|+.+|++|+.++||+|..+.||..+|++.+
T Consensus       178 Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  178 YCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             chhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            9999999999999999999999999999999999999996

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=2e-39  Score=249.23  Aligned_cols=192  Identities=21%  Similarity=0.270  Sum_probs=168.1

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      +..|.++||||++|||++++..|++.|++|++.+++....+++...+..   ......+.||+++.  ++..+++..+.+
T Consensus        12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g---~~~h~aF~~DVS~a~~v~~~l~e~~k~~   88 (256)
T KOG1200|consen   12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG---YGDHSAFSCDVSKAHDVQNTLEEMEKSL   88 (256)
T ss_pred             HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC---CCccceeeeccCcHHHHHHHHHHHHHhc
Confidence            5689999999999999999999999999999999999988887776643   24567889999974  344556666666


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhh--CCCcEEEEECCccccccCCCCCch
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK--RKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~--~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      +  .+++||||||+..+  ..+..++.++|+..+.+|+.|.|+++|++...|..  +++++|||+||+-|..  ++-+.+
T Consensus        89 g--~psvlVncAGItrD--~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGki--GN~GQt  162 (256)
T KOG1200|consen   89 G--TPSVLVNCAGITRD--GLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKI--GNFGQT  162 (256)
T ss_pred             C--CCcEEEEcCccccc--cceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccc--ccccch
Confidence            6  46699999999865  66889999999999999999999999999998543  3345999999999999  788999


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhhh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLVM  251 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~  251 (255)
                      .|++||+++.+|++++++|++.+|||||.|.||+|.|||++....
T Consensus       163 nYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~  207 (256)
T KOG1200|consen  163 NYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPP  207 (256)
T ss_pred             hhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCH
Confidence            999999999999999999999999999999999999999998764

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-37  Score=259.77  Aligned_cols=193  Identities=21%  Similarity=0.294  Sum_probs=172.6

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.+++.++..+.+|++|.  +++.++++.+.
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR   84 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            4679999999999999999999999999999999999999998888888776666788999999983  45666777777


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|++|||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..  +.+....
T Consensus        85 ~g~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~  158 (265)
T PRK07062         85 FGG--VDMLVNNAGQGRV--STFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQ--PEPHMVA  158 (265)
T ss_pred             cCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccC--CCCCchH
Confidence            764  5699999998643  567888999999999999999999999999999888789999999999887  6788899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      |+++|+|+.+|+++++.|+.++||+||+|+||+++|++++.
T Consensus       159 y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~  199 (265)
T PRK07062        159 TSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRR  199 (265)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhh
Confidence            99999999999999999999999999999999999998654

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.8e-37  Score=262.17  Aligned_cols=188  Identities=19%  Similarity=0.223  Sum_probs=157.3

Q ss_pred             cCCcEEEEECCC--CchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           51 KYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        51 ~~gk~vlITGas--~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      ++||+++||||+  +|||+++|++|+++|++|++++|+++ .++..+++.+..+. . ..+.+|++|.  +++.++++.+
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~-~-~~~~~Dv~d~~~v~~~~~~i~~   79 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGS-D-YVYELDVSKPEHFKSLAESLKK   79 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCC-c-eEEEecCCCHHHHHHHHHHHHH
Confidence            459999999997  79999999999999999999999863 33334444333222 2 5688999983  5667777777


Q ss_pred             HhcCCCccEEEEecCCCCCc--ccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          127 AIEGLDVGVLINNVGISYPY--ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                      .+++  +|+||||||+..+.  ..++.+.+.++|++++++|+.+++++++.++|.|.+  +|+||++||.++..  +.|.
T Consensus        80 ~~g~--iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~~~--~~~~  153 (274)
T PRK08415         80 DLGK--IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSYLGGVK--YVPH  153 (274)
T ss_pred             HcCC--CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCCcc--CCCc
Confidence            7775  55999999985321  245778999999999999999999999999999964  48999999998877  6788


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      +..|++||+|+.+|+++|+.|+.++||+||+|+||+++|++.+
T Consensus       154 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~  196 (274)
T PRK08415        154 YNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAAS  196 (274)
T ss_pred             chhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHh
Confidence            8999999999999999999999999999999999999998754

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-37  Score=258.53  Aligned_cols=192  Identities=27%  Similarity=0.326  Sum_probs=169.8

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      +++|+++||||++|||++++++|+++|++|++++|+++++++..+++.+.+.+.++..+.+|+++.  +++.++++.+.+
T Consensus         5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (260)
T PRK07063          5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF   84 (260)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            569999999999999999999999999999999999999988888887643455688899999974  456667777777


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++  +|++|||||....  .+..+.+.++|++++++|+.+++.++++++|.|++++.|+||++||..+..  +.+...+|
T Consensus        85 g~--id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~Y  158 (260)
T PRK07063         85 GP--LDVLVNNAGINVF--ADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFK--IIPGCFPY  158 (260)
T ss_pred             CC--CcEEEECCCcCCC--CChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhcc--CCCCchHH
Confidence            75  5599999998643  345678899999999999999999999999999888889999999998877  67788899


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++||+|+.+|+++++.|++++||+||+|+||+++|++.+.
T Consensus       159 ~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~  198 (260)
T PRK07063        159 PVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTED  198 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhh
Confidence            9999999999999999999999999999999999998754

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=1.8e-37  Score=264.21  Aligned_cols=193  Identities=19%  Similarity=0.153  Sum_probs=158.9

Q ss_pred             cccCCcEEEEECC--CCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhc-------CC----ceEEEEEEEC--
Q 025260           49 LRKYGSWALVTGP--TDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKY-------AK----TQIKSVVVDF--  113 (255)
Q Consensus        49 ~~~~gk~vlITGa--s~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~-------~~----~~~~~~~~d~--  113 (255)
                      ++++||+++||||  |+|||+++|++|+++|++|++ +|+.+++++...++++..       ..    .....+.+|+  
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            4477999999999  899999999999999999999 888888888877665310       11    1134567777  


Q ss_pred             CC--------------------CcHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHH
Q 025260          114 SG--------------------DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT  173 (255)
Q Consensus       114 ~~--------------------~~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~  173 (255)
                      ++                    ++++.++++.+.+++  +|+||||||.......++.+.+.++|+++|++|+.+++.++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~--iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~  161 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGS--IDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLL  161 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCC--CCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            21                    346666777777775  55999999864322356889999999999999999999999


Q ss_pred             HHHhhhhhhCCCcEEEEECCccccccCCCCCc-hhchHHHHHHHHHHHHHHHHHcc-CCceEEEeeeeeeeeCCcch
Q 025260          174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY-SVYAATKAYIDQFSRSLYVEYRK-SGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       174 ~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~-~~Y~asK~al~~~~~~l~~e~~~-~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      |.++|.|+++  |+||++||..+..  +.|++ ..|++||+|+.+|+++|+.|+.+ +||+||+|+||+++|+|.++
T Consensus       162 ~~~~p~m~~~--G~II~isS~a~~~--~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~  234 (303)
T PLN02730        162 QHFGPIMNPG--GASISLTYIASER--IIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKA  234 (303)
T ss_pred             HHHHHHHhcC--CEEEEEechhhcC--CCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhc
Confidence            9999999653  9999999998877  55655 58999999999999999999986 79999999999999999764

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3e-37  Score=260.41  Aligned_cols=189  Identities=16%  Similarity=0.189  Sum_probs=158.2

Q ss_pred             cCCcEEEEECCCC--chHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           51 KYGSWALVTGPTD--GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        51 ~~gk~vlITGas~--gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      ++||+++||||++  |||+++|++|+++|++|++.+|++...++ .+++.+..+.  ...+.+|++|  ++++.++++.+
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~g~--~~~~~~Dv~d~~~v~~~~~~~~~   81 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESLGS--DFVLPCDVEDIASVDAVFEALEK   81 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhcCC--ceEEeCCCCCHHHHHHHHHHHHH
Confidence            5699999999996  99999999999999999999998643333 3344332222  2468899997  45777788888


Q ss_pred             HhcCCCccEEEEecCCCCCc--ccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          127 AIEGLDVGVLINNVGISYPY--ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                      .+++  +|+||||||+....  ..++.+.+.++|++++++|+.++++++|+++|+|.+  +|+||++||.++..  +.|.
T Consensus        82 ~~g~--iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~--~~~~  155 (271)
T PRK06505         82 KWGK--LDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTR--VMPN  155 (271)
T ss_pred             HhCC--CCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCccc--cCCc
Confidence            7775  55999999986421  135778999999999999999999999999999963  48999999998877  6788


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      +.+|++||+|+.+|+++|+.|++++||+||+|+||+++|++.+.
T Consensus       156 ~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~  199 (271)
T PRK06505        156 YNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAG  199 (271)
T ss_pred             cchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCcccccccc
Confidence            89999999999999999999999999999999999999998653

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=6e-37  Score=255.82  Aligned_cols=190  Identities=25%  Similarity=0.322  Sum_probs=162.0

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+..  ++..+++++.  +.++..+.+|+++.  +++.++++.+.
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEAL--GRKFHFITADLIQQKDIDSIVSQAVEV   80 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHc--CCeEEEEEeCCCCHHHHHHHHHHHHHH
Confidence            466999999999999999999999999999999998643  3334444433  34678899999973  46666777676


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCch
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      +++  +|++|||||+...  .++.+.+.++|++++++|+.+++.++++++|.|++++ +|+||++||..+..  +.+...
T Consensus        81 ~g~--iD~lv~~ag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~--~~~~~~  154 (251)
T PRK12481         81 MGH--IDILINNAGIIRR--QDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQ--GGIRVP  154 (251)
T ss_pred             cCC--CCEEEECCCcCCC--CCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcC--CCCCCc
Confidence            675  5699999998754  4577889999999999999999999999999998765 58999999999887  667788


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .|++||+|+++|+++++.|+.++||+||+|+||+++|++.+.+
T Consensus       155 ~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~  197 (251)
T PRK12481        155 SYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAAL  197 (251)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhc
Confidence            9999999999999999999999999999999999999987653

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.5e-37  Score=256.75  Aligned_cols=187  Identities=16%  Similarity=0.148  Sum_probs=158.7

Q ss_pred             cCCcEEEEECCC--CchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           51 KYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        51 ~~gk~vlITGas--~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      ++||+++||||+  +|||+++|++|+++|++|++++|+. +.++..+++.    ...+..+.+|++|.  +++.++++.+
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~   79 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV----DEEDLLVECDVASDESIERAFATIKE   79 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc----cCceeEEeCCCCCHHHHHHHHHHHHH
Confidence            569999999999  7999999999999999999999984 4444444432    23567889999973  5677777777


Q ss_pred             HhcCCCccEEEEecCCCCCc--ccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          127 AIEGLDVGVLINNVGISYPY--ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                      .+++  +|+||||||+..+.  ..++.+.+.++|++.+++|+.+++.+++.++|+|.+  +|+||++||.++..  +.+.
T Consensus        80 ~~g~--iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~--~~~~  153 (252)
T PRK06079         80 RVGK--IDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSER--AIPN  153 (252)
T ss_pred             HhCC--CCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCccc--cCCc
Confidence            7775  55999999986431  245778999999999999999999999999998853  58999999998877  6788


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      +..|++||+|+.+|+++|+.|++++||+||+|+||+|+|++.+.
T Consensus       154 ~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~  197 (252)
T PRK06079        154 YNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTG  197 (252)
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccc
Confidence            89999999999999999999999999999999999999998643

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=1.1e-36  Score=255.19  Aligned_cols=192  Identities=30%  Similarity=0.381  Sum_probs=165.8

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcC-CceEEEEEEECCCC--cHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYA-KTQIKSVVVDFSGD--LDEGVERIK  125 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~--~~~~~~~~~  125 (255)
                      .+++||+++||||++|||+++|++|++.|++|++++|+++.+++..+++..... ..++..+.||++++  +++.++...
T Consensus         4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~   83 (270)
T KOG0725|consen    4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV   83 (270)
T ss_pred             ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence            457799999999999999999999999999999999999999999988776533 46789999999864  456666666


Q ss_pred             HH-hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhH-HHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC
Q 025260          126 EA-IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG-TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP  203 (255)
Q Consensus       126 ~~-~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~-~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~  203 (255)
                      +. +++  +|+||||||..... .+..+.+.|+|+++|++|+.| .+.+.+.+.|++.++++|.|+++||.++..  +.+
T Consensus        84 ~~~~Gk--idiLvnnag~~~~~-~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~--~~~  158 (270)
T KOG0725|consen   84 EKFFGK--IDILVNNAGALGLT-GSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVG--PGP  158 (270)
T ss_pred             HHhCCC--CCEEEEcCCcCCCC-CChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEecccccc--CCC
Confidence            66 464  55999999998753 368999999999999999995 677777777777777889999999999887  434


Q ss_pred             Cc-hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          204 LY-SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       204 ~~-~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                      .. ..|++||+|+.+|+|+++.|+.++|||||+|.||.+.|++
T Consensus       159 ~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~  201 (270)
T KOG0725|consen  159 GSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL  201 (270)
T ss_pred             CCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence            44 7999999999999999999999999999999999999998

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.1e-36  Score=255.46  Aligned_cols=190  Identities=27%  Similarity=0.395  Sum_probs=165.4

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      ++||+++||||++|||+++|++|+++|++|++++|+ +++++..+++.+.  +.++..+.+|+++.  +++.++++.+.+
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN--GGKAKAYHVDISDEQQVKDFASEIKEQF   80 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            469999999999999999999999999999999999 7778777777654  34578889999874  466677777777


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++  +|++|||||.... ..++.+.+.+.|++++++|+.+++.++++++|.|++++ |+||++||..+..  +.+....|
T Consensus        81 g~--id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~--~~~~~~~Y  154 (272)
T PRK08589         81 GR--VDVLFNNAGVDNA-AGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQA--ADLYRSGY  154 (272)
T ss_pred             CC--cCEEEECCCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcC--CCCCCchH
Confidence            75  5699999998642 24567889999999999999999999999999998664 8999999999887  66778999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ++||+|+++|+++++.|+.++||+||+|+||+++|++.++.
T Consensus       155 ~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  195 (272)
T PRK08589        155 NAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKL  195 (272)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhh
Confidence            99999999999999999999999999999999999987643

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-36  Score=261.73  Aligned_cols=190  Identities=24%  Similarity=0.307  Sum_probs=168.2

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      +++|+++|||||+|||+++|++|+++|++|++++|+++++++..+++++.  +.++..+.+|++|.  +++.++++.+.+
T Consensus         5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (330)
T PRK06139          5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL--GAEVLVVPTDVTDADQVKALATQAASFG   82 (330)
T ss_pred             CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            55899999999999999999999999999999999999999988888764  34677888999873  455666666655


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      +  ++|++|||||+...  .++.+.+.+++++++++|+.+++++++.++|+|++++.|+||++||..+..  +.|....|
T Consensus        83 g--~iD~lVnnAG~~~~--~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~--~~p~~~~Y  156 (330)
T PRK06139         83 G--RIDVWVNNVGVGAV--GRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFA--AQPYAAAY  156 (330)
T ss_pred             C--CCCEEEECCCcCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcC--CCCCchhH
Confidence            5  46699999998754  568899999999999999999999999999999988889999999999887  67888999


Q ss_pred             hHHHHHHHHHHHHHHHHHccC-CceEEEeeeeeeeeCCcch
Q 025260          209 AATKAYIDQFSRSLYVEYRKS-GIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~-gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++||+|+.+|+++|+.|+.+. ||+|++|+||+++||+.+.
T Consensus       157 ~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~  197 (330)
T PRK06139        157 SASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRH  197 (330)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccc
Confidence            999999999999999999874 8999999999999998753

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-36  Score=252.72  Aligned_cols=194  Identities=22%  Similarity=0.234  Sum_probs=167.9

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+++++++..+++++.+  .++..+.+|+++.  +++.++++.+.
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEG--GEAVALAGDVRDEAYAKALVALAVER   80 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            3568999999999999999999999999999999999999888888877653  4577888999873  46667777777


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|++|||||.... ..++.+.+.++|++++++|+.+++.+++.++|.|++++.|+||++||..+... +.+....
T Consensus        81 ~~~--id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~-~~~~~~~  156 (254)
T PRK07478         81 FGG--LDIAFNNAGTLGE-MGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTA-GFPGMAA  156 (254)
T ss_pred             cCC--CCEEEECCCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhcc-CCCCcch
Confidence            764  5699999998643 24577889999999999999999999999999999888899999999887631 4577899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |++||+|+++++++++.|+.++||+|++|+||+++|+|.+..
T Consensus       157 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  198 (254)
T PRK07478        157 YAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAM  198 (254)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccc
Confidence            999999999999999999999999999999999999987543

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.9e-36  Score=254.08  Aligned_cols=188  Identities=15%  Similarity=0.137  Sum_probs=157.7

Q ss_pred             cCCcEEEEECCCC--chHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           51 KYGSWALVTGPTD--GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        51 ~~gk~vlITGas~--gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      ++||+++||||++  |||+++|++|+++|++|++.+|++ +.++..+++.+..+.  ...+.+|++|  ++++.++++.+
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~--~~~~~~Dv~~~~~v~~~~~~~~~   82 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGC--NFVSELDVTNPKSISNLFDDIKE   82 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCC--ceEEEccCCCHHHHHHHHHHHHH
Confidence            4589999999997  999999999999999999999884 444555556544322  2457899998  45677777777


Q ss_pred             HhcCCCccEEEEecCCCCCc--ccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          127 AIEGLDVGVLINNVGISYPY--ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                      .+++  +|+||||||.....  ..++.+.+.++|++.+++|+.+++.++++++|.|.+  +|+||++||..+..  +.|.
T Consensus        83 ~~g~--iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~--~~~~  156 (260)
T PRK06603         83 KWGS--FDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEK--VIPN  156 (260)
T ss_pred             HcCC--ccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCcccc--CCCc
Confidence            7774  56999999975421  235778899999999999999999999999999853  58999999988876  6788


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      +..|++||+|+.+|+++|+.|++++||+||+|+||+++|++.+
T Consensus       157 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~  199 (260)
T PRK06603        157 YNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASS  199 (260)
T ss_pred             ccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhh
Confidence            8999999999999999999999999999999999999999854

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-36  Score=252.12  Aligned_cols=193  Identities=23%  Similarity=0.321  Sum_probs=165.4

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      ++||+++||||++|||++++++|+++|++|++++|+.+++++..+++.+.+  .++..+.+|+++.  +++.++++.+.+
T Consensus         7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T PRK05867          7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSG--GKVVPVCCDVSQHQQVTSMLDQVTAEL   84 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            569999999999999999999999999999999999998888888876643  4577889999873  466677777777


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCchh
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++  +|++|||||....  .++.+.+.++|++++++|+.+++.++++++|.|++++ +|+||++||..+......+....
T Consensus        85 g~--id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~  160 (253)
T PRK05867         85 GG--IDIAVCNAGIITV--TPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSH  160 (253)
T ss_pred             CC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccc
Confidence            75  5699999998754  4577889999999999999999999999999998765 57999999988764211124578


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |++||+|+++|++++++|+.++||+||+|+||+++|++.++.
T Consensus       161 Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~  202 (253)
T PRK05867        161 YCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPY  202 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccc
Confidence            999999999999999999999999999999999999997654

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-36  Score=254.50  Aligned_cols=191  Identities=21%  Similarity=0.268  Sum_probs=168.5

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      ++||+++||||++|||+++|++|+++|++|++++|+++++++..+++++.  +.++..+.+|++|.  +++.++++.+.+
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   81 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE--GFDVHGVMCDVRHREEVTHLADEAFRLL   81 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            56999999999999999999999999999999999999888888887654  34577889999873  456667777766


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCchh
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++  +|++|||||+...  .++.+.+.++|++++++|+.+++++++.++|.|.+++ +|+||++||.++..  +.++...
T Consensus        82 g~--id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~--~~~~~~~  155 (275)
T PRK05876         82 GH--VDVVFSNAGIVVG--GPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLV--PNAGLGA  155 (275)
T ss_pred             CC--CCEEEECCCcCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhcc--CCCCCch
Confidence            64  6699999998654  5688899999999999999999999999999998776 68999999999987  7788999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |++||+|+.+|+++|+.|+.++||+|++++||+++|++.++.
T Consensus       156 Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~  197 (275)
T PRK05876        156 YGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANS  197 (275)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccch
Confidence            999999999999999999999999999999999999987553

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.8e-36  Score=252.83  Aligned_cols=191  Identities=16%  Similarity=0.132  Sum_probs=158.2

Q ss_pred             cccCCcEEEEECCC--CchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHH
Q 025260           49 LRKYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERI  124 (255)
Q Consensus        49 ~~~~gk~vlITGas--~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~  124 (255)
                      .+++||+++||||+  +|||+++|++|+++|++|++++|+.+.. +..+++.+..+  ....+.+|++|  ++++.++++
T Consensus         6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~-~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~   82 (258)
T PRK07533          6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKAR-PYVEPLAEELD--APIFLPLDVREPGQLEAVFARI   82 (258)
T ss_pred             cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhH-HHHHHHHHhhc--cceEEecCcCCHHHHHHHHHHH
Confidence            34669999999999  4999999999999999999999986532 23333333222  24578899987  456777777


Q ss_pred             HHHhcCCCccEEEEecCCCCCc--ccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC
Q 025260          125 KEAIEGLDVGVLINNVGISYPY--ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD  202 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~  202 (255)
                      .+.+++  +|++|||||+....  ..++.+.+.++|++++++|+.+++++++.++|.|.  ++|+||++||..+..  +.
T Consensus        83 ~~~~g~--ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~--~~g~Ii~iss~~~~~--~~  156 (258)
T PRK07533         83 AEEWGR--LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMT--NGGSLLTMSYYGAEK--VV  156 (258)
T ss_pred             HHHcCC--CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhc--cCCEEEEEecccccc--CC
Confidence            777764  56999999986421  24577889999999999999999999999999995  358999999988876  66


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      +.+..|++||+|+.+|+++|+.|+.++||+||+|+||+++|+|.++
T Consensus       157 ~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~  202 (258)
T PRK07533        157 ENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASG  202 (258)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhc
Confidence            7889999999999999999999999999999999999999998754

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=1.7e-36  Score=254.19  Aligned_cols=189  Identities=19%  Similarity=0.189  Sum_probs=159.0

Q ss_pred             cCCcEEEEECCC--CchHHHHHHHHHHcCCcEEEEeCChh--hHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHH
Q 025260           51 KYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPD--KLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERI  124 (255)
Q Consensus        51 ~~gk~vlITGas--~gIG~~la~~la~~G~~V~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~  124 (255)
                      ++||+++||||+  +|||+++|++|+++|++|++.+|+.+  ..++..+++.+..  .....+.+|++|  ++++.++++
T Consensus         4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~   81 (258)
T PRK07370          4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPL--NPSLFLPCDVQDDAQIEETFETI   81 (258)
T ss_pred             cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhcc--CcceEeecCcCCHHHHHHHHHHH
Confidence            569999999986  89999999999999999999876543  3455555665443  235678899987  456777777


Q ss_pred             HHHhcCCCccEEEEecCCCCC--cccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC
Q 025260          125 KEAIEGLDVGVLINNVGISYP--YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD  202 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~  202 (255)
                      .+.+++  +|++|||||+...  ...++.+.+.++|++++++|+.+++.+++.++|.|.+  +|+||++||..+..  +.
T Consensus        82 ~~~~g~--iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~--~~  155 (258)
T PRK07370         82 KQKWGK--LDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVR--AI  155 (258)
T ss_pred             HHHcCC--CCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEecccccc--CC
Confidence            777775  5599999998532  1245778899999999999999999999999999964  48999999998877  67


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      |++..|++||+|+.+|+++|+.|++++||+||+|+||+++|++.+
T Consensus       156 ~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~  200 (258)
T PRK07370        156 PNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASS  200 (258)
T ss_pred             cccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhh
Confidence            889999999999999999999999999999999999999999864

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-36  Score=246.85  Aligned_cols=187  Identities=20%  Similarity=0.194  Sum_probs=161.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.+  .++..+++|+++.  +++.++++.+.
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALT--DNVYSFQLKDFSQESIRHLFDAIEQQ   79 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CCeEEEEccCCCHHHHHHHHHHHHHH
Confidence            3569999999999999999999999999999999999999999888887653  4577888999873  45666777777


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCch
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      ++. ++|++|||||.... ..++.+.+.++|.+.+++|+.+++.+++.++|+|.+++ +|+||++||..+.     ++..
T Consensus        80 ~g~-~iD~li~nag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~-----~~~~  152 (227)
T PRK08862         80 FNR-APDVLVNNWTSSPL-PSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH-----QDLT  152 (227)
T ss_pred             hCC-CCCEEEECCccCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC-----CCcc
Confidence            762 45699999986433 34678889999999999999999999999999998764 7999999996542     4567


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                      .|++||+|+.+|+++|+.|+.++||+||+|+||+++|+.
T Consensus       153 ~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~  191 (227)
T PRK08862        153 GVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANG  191 (227)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCC
Confidence            899999999999999999999999999999999999984

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.5e-36  Score=252.93  Aligned_cols=191  Identities=17%  Similarity=0.121  Sum_probs=157.1

Q ss_pred             ccCCcEEEEECCC--CchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHH
Q 025260           50 RKYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK  125 (255)
Q Consensus        50 ~~~gk~vlITGas--~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~  125 (255)
                      +++||+++||||+  +|||+++|++|+++|++|++++|+... ++..+++.+.....++..+.+|++|.  +++.++++.
T Consensus         4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   82 (257)
T PRK08594          4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERL-EKEVRELADTLEGQESLLLPCDVTSDEEITACFETIK   82 (257)
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc-hHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHH
Confidence            4569999999997  899999999999999999999876422 12222333222234577889999974  566777777


Q ss_pred             HHhcCCCccEEEEecCCCCC--cccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC
Q 025260          126 EAIEGLDVGVLINNVGISYP--YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP  203 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~  203 (255)
                      +.+++  +|++|||||+...  ...++.+.+.++|++.+++|+.+++.+++.++|+|.+  +|+||++||..+..  +.+
T Consensus        83 ~~~g~--ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~--~~~  156 (257)
T PRK08594         83 EEVGV--IHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGER--VVQ  156 (257)
T ss_pred             HhCCC--ccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCcc--CCC
Confidence            77774  5599999998632  1245678899999999999999999999999999854  58999999999887  678


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      .+..|++||+|+.+|+++|+.|++++||+||+|+||+++|++.+
T Consensus       157 ~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~  200 (257)
T PRK08594        157 NYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAK  200 (257)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHh
Confidence            88999999999999999999999999999999999999999754

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-36  Score=257.84  Aligned_cols=193  Identities=21%  Similarity=0.277  Sum_probs=159.5

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh----------hhHHHHHHHHHhhcCCceEEEEEEECCC--CcH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP----------DKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLD  118 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~----------~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~  118 (255)
                      ++||+++||||++|||+++|++|++.|++|++++|+.          +++++..+++.+.  +.++..+.+|+++  +++
T Consensus         6 l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~   83 (305)
T PRK08303          6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA--GGRGIAVQVDHLVPEQVR   83 (305)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc--CCceEEEEcCCCCHHHHH
Confidence            5699999999999999999999999999999999984          3455566666543  3356788999997  356


Q ss_pred             HHHHHHHHHhcCCCccEEEEec-CCCC--CcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcc
Q 025260          119 EGVERIKEAIEGLDVGVLINNV-GISY--PYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGA  195 (255)
Q Consensus       119 ~~~~~~~~~~~~~~id~lv~na-g~~~--~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~  195 (255)
                      ++++++.+.+++  +|++|||| |...  ....++.+.+.++|++++++|+.+++.++++++|.|.++++|+||++||..
T Consensus        84 ~~~~~~~~~~g~--iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~  161 (305)
T PRK08303         84 ALVERIDREQGR--LDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGT  161 (305)
T ss_pred             HHHHHHHHHcCC--ccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcc
Confidence            677777777774  56999999 7531  112457788899999999999999999999999999877789999999976


Q ss_pred             cccc-CCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          196 AIVI-PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       196 ~~~~-~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      +... .+.+....|++||+|+.+|+++|+.|+++.||+||+|+||+++|+|..
T Consensus       162 ~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~  214 (305)
T PRK08303        162 AEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMML  214 (305)
T ss_pred             ccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHH
Confidence            5431 123456789999999999999999999999999999999999999854

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-36  Score=251.31  Aligned_cols=195  Identities=21%  Similarity=0.259  Sum_probs=165.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeC-ChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      +++||+++||||++|||+++|++|+++|++|++++| +++.+++..+++.... +.++..+.+|++|.  +++.++++.+
T Consensus         5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (260)
T PRK08416          5 EMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKY-GIKAKAYPLNILEPETYKELFKKIDE   83 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            356999999999999999999999999999998864 5666777777765433 45688999999973  4666677776


Q ss_pred             HhcCCCccEEEEecCCCCC----cccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC
Q 025260          127 AIEGLDVGVLINNVGISYP----YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD  202 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~----~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~  202 (255)
                      .+++  +|++|||||+...    ...++.+.+.+++++.+++|+.+++.+++.++|.|++++.|+||++||..+..  +.
T Consensus        84 ~~g~--id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~  159 (260)
T PRK08416         84 DFDR--VDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLV--YI  159 (260)
T ss_pred             hcCC--ccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecccccc--CC
Confidence            6664  5699999997531    12356778889999999999999999999999999887789999999998876  66


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |.+..|++||+|+++|+++|+.|+.++||+||+|+||+++|++.+.+
T Consensus       160 ~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~  206 (260)
T PRK08416        160 ENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAF  206 (260)
T ss_pred             CCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhc
Confidence            88899999999999999999999999999999999999999986543

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=6.9e-36  Score=231.67  Aligned_cols=185  Identities=28%  Similarity=0.363  Sum_probs=163.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      +..|.++|||||++|||+++|++|.+.|-+|++++|++..+++++++      ...++...||+.|  +.++.++.++++
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~------~p~~~t~v~Dv~d~~~~~~lvewLkk~   75 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE------NPEIHTEVCDVADRDSRRELVEWLKKE   75 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc------CcchheeeecccchhhHHHHHHHHHhh
Confidence            45699999999999999999999999999999999999999988765      3456667777765  568899999998


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++.++  ++|||||+.....-.-.+-..++.++-+++|+.+|+.+++.++|++++++.+.||++||..+..  |+...+.
T Consensus        76 ~P~lN--vliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafv--Pm~~~Pv  151 (245)
T COG3967          76 YPNLN--VLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFV--PMASTPV  151 (245)
T ss_pred             CCchh--eeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccC--ccccccc
Confidence            88655  9999999986533222344566778899999999999999999999999999999999999998  8888999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                      |+++|+|+..|+.+||..++..+|.|..+.|..|+|+
T Consensus       152 YcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         152 YCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             chhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            9999999999999999999999999999999999997

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-36  Score=253.55  Aligned_cols=189  Identities=22%  Similarity=0.236  Sum_probs=163.9

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh---------hhHHHHHHHHHhhcCCceEEEEEEECCCC--cHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP---------DKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDE  119 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~  119 (255)
                      ++||+++||||++|||+++|++|+++|++|++++|+.         +.+++..+++.+.  +.++..+.+|++|.  +++
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~   81 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA--GGEAVANGDDIADWDGAAN   81 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc--CCceEEEeCCCCCHHHHHH
Confidence            4689999999999999999999999999999999876         6677777777654  33567888999973  466


Q ss_pred             HHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC------CcEEEEECC
Q 025260          120 GVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK------KGAIVNIGS  193 (255)
Q Consensus       120 ~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~------~g~iv~vsS  193 (255)
                      .++++.+.+++  +|++|||||+...  .++.+.+.++|++++++|+.++++++++++|+|+++.      .|+||++||
T Consensus        82 ~~~~~~~~~g~--id~lv~nAG~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS  157 (286)
T PRK07791         82 LVDAAVETFGG--LDVLVNNAGILRD--RMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSS  157 (286)
T ss_pred             HHHHHHHhcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCc
Confidence            77777777764  5699999998654  4678899999999999999999999999999997642      379999999


Q ss_pred             ccccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          194 GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       194 ~~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      .++..  +.++...|++||+|+.+|+++|+.|+.++||+||+|+|| +.|+|.+.
T Consensus       158 ~~~~~--~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~  209 (286)
T PRK07791        158 GAGLQ--GSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTET  209 (286)
T ss_pred             hhhCc--CCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchh
Confidence            99888  778899999999999999999999999999999999999 89998754

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.2e-36  Score=252.12  Aligned_cols=190  Identities=17%  Similarity=0.188  Sum_probs=157.0

Q ss_pred             cCCcEEEEECC--CCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           51 KYGSWALVTGP--TDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        51 ~~gk~vlITGa--s~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      ++||+++||||  ++|||+++|++|+++|++|++++|++ +.++..+++.+..+.  ...+.+|++|  ++++.++++.+
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~Dv~~~~~v~~~~~~~~~   80 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDS--ELVFRCDVASDDEINQVFADLGK   80 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCC--ceEEECCCCCHHHHHHHHHHHHH
Confidence            46999999997  67999999999999999999998864 344445555443322  3568899997  45677777777


Q ss_pred             HhcCCCccEEEEecCCCCCc---ccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC
Q 025260          127 AIEGLDVGVLINNVGISYPY---ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP  203 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~  203 (255)
                      .+++  +|++|||||+....   ...+++.+.++|++++++|+.+++++++.++|.|+++ +|+||++||.++..  +.|
T Consensus        81 ~~g~--iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~--~~~  155 (261)
T PRK08690         81 HWDG--LDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVR--AIP  155 (261)
T ss_pred             HhCC--CcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEccccccc--CCC
Confidence            7775  55999999986431   1124567888999999999999999999999988654 58999999998877  678


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++..|++||+|+.+|+++++.|++++||+||+|+||+++|++.++
T Consensus       156 ~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~  200 (261)
T PRK08690        156 NYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASG  200 (261)
T ss_pred             CcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhc
Confidence            889999999999999999999999999999999999999998654

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-35  Score=247.22  Aligned_cols=194  Identities=26%  Similarity=0.347  Sum_probs=164.8

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh-hHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD-KLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI  124 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~  124 (255)
                      .++++||+++||||++|||+++|++|+++|++|++++|+.+ .+++..+++.+.  +.++..+.+|++|+  +++.++++
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~   80 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA--GRRAIQIAADVTSKADLRAAVART   80 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHH
Confidence            34577999999999999999999999999999999999764 456666666654  34567788999874  46666777


Q ss_pred             HHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                      .+.+++  +|++|||||....  .++.+.+.++|++++++|+.+++.++++++|.|++++.|+||++||.++....+.+.
T Consensus        81 ~~~~g~--id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  156 (254)
T PRK06114         81 EAELGA--LTLAVNAAGIANA--NPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLL  156 (254)
T ss_pred             HHHcCC--CCEEEECCCCCCC--CChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCC
Confidence            777764  5699999998653  457788999999999999999999999999999888889999999998876322233


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      ...|++||+|+++++++++.|+.++||+||+|+||+++|+|.+
T Consensus       157 ~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~  199 (254)
T PRK06114        157 QAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNT  199 (254)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccc
Confidence            6899999999999999999999999999999999999999875

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-35  Score=252.95  Aligned_cols=189  Identities=26%  Similarity=0.417  Sum_probs=166.4

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++..   ...+..+.+|++|.  +++.++++.+.
T Consensus         6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~   82 (296)
T PRK05872          6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG---DDRVLTVVADVTDLAAMQAAAEEAVER   82 (296)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            46699999999999999999999999999999999999988887776642   34567778999973  45666777776


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|++|||||+...  .++.+.+.++|++++++|+.+++++++.++|.|.++ .|+||++||..+..  +.++...
T Consensus        83 ~g~--id~vI~nAG~~~~--~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~  155 (296)
T PRK05872         83 FGG--IDVVVANAGIASG--GSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFA--AAPGMAA  155 (296)
T ss_pred             cCC--CCEEEECCCcCCC--cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcC--CCCCchH
Confidence            664  6699999998753  568889999999999999999999999999998764 58999999999888  7788999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      |++||+++++|+++++.|+.++||+|++++||+++|+|.+.
T Consensus       156 Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  196 (296)
T PRK05872        156 YCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRD  196 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhh
Confidence            99999999999999999999999999999999999998765

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.2e-35  Score=250.84  Aligned_cols=188  Identities=17%  Similarity=0.173  Sum_probs=155.8

Q ss_pred             cCCcEEEEECCC--CchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           51 KYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        51 ~~gk~vlITGas--~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      ++||+++||||+  +|||+++|++|+++|++|++++|++. ..+..+++.+..+.  ...+.+|++|  ++++.++++.+
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~~--~~~~~~Dl~~~~~v~~~~~~~~~   84 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELGA--FVAGHCDVTDEASIDAVFETLEK   84 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcCC--ceEEecCCCCHHHHHHHHHHHHH
Confidence            458999999997  89999999999999999999988742 33334444333222  4568899987  45667777777


Q ss_pred             HhcCCCccEEEEecCCCCCc--ccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          127 AIEGLDVGVLINNVGISYPY--ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                      .+++  +|++|||||+....  ..++.+.+.++|++.+++|+.+++++++.++|.|.+  +|+||++||.++..  +.|.
T Consensus        85 ~~g~--iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~--~~p~  158 (272)
T PRK08159         85 KWGK--LDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGAEK--VMPH  158 (272)
T ss_pred             hcCC--CcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEecccccc--CCCc
Confidence            7764  56999999986421  245778899999999999999999999999998853  58999999988776  6788


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      +..|++||+|+.+|+++|+.|+.++||+||+|+||+++|++.+
T Consensus       159 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~  201 (272)
T PRK08159        159 YNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAAS  201 (272)
T ss_pred             chhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHh
Confidence            9999999999999999999999999999999999999998764

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2e-35  Score=247.97  Aligned_cols=188  Identities=16%  Similarity=0.190  Sum_probs=152.8

Q ss_pred             cCCcEEEEECC--CCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           51 KYGSWALVTGP--TDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        51 ~~gk~vlITGa--s~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      ++||+++||||  ++|||+++|++|+++|++|++++|... .++..+++.+..+.  ...+.+|++|  ++++.++++.+
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~Dv~d~~~v~~~~~~~~~   80 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEFGS--DLVFPCDVASDEQIDALFASLGQ   80 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchH-HHHHHHHHHHhcCC--cceeeccCCCHHHHHHHHHHHHH
Confidence            45899999997  689999999999999999999876532 22233333333222  2467899987  45777788887


Q ss_pred             HhcCCCccEEEEecCCCCCcc---cccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC
Q 025260          127 AIEGLDVGVLINNVGISYPYA---RFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP  203 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~  203 (255)
                      .+++  +|++|||||+.....   ..+++.+.++|++.+++|+.++++++++++|+|.  ++|+||++||..+..  +.+
T Consensus        81 ~~g~--iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~--~~g~Ii~iss~~~~~--~~~  154 (260)
T PRK06997         81 HWDG--LDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS--DDASLLTLSYLGAER--VVP  154 (260)
T ss_pred             HhCC--CcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC--CCceEEEEecccccc--CCC
Confidence            7775  559999999864311   1245678899999999999999999999999994  458999999998876  678


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      .+..|++||+|+.+|+++|+.|++++||+||+|+||+++|++.+
T Consensus       155 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~  198 (260)
T PRK06997        155 NYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAAS  198 (260)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhc
Confidence            88899999999999999999999999999999999999998764

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=1.6e-35  Score=246.53  Aligned_cols=187  Identities=19%  Similarity=0.179  Sum_probs=161.4

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcCC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGL  131 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~  131 (255)
                      ++++||||++|||+++|++|+ +|++|++++|+++++++..+++++.+ ...+..+.+|++|.  +++.++++.+.+++ 
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~-   77 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRG-ATSVHVLSFDAQDLDTHRELVKQTQELAGE-   77 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcc-CCceEEEEcccCCHHHHHHHHHHHHHhcCC-
Confidence            579999999999999999999 59999999999999999988887654 33467889999873  56667777776664 


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCchhchH
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAA  210 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~Y~a  210 (255)
                       +|++|||||...+  .+..+.+.+.+++++++|+.+++.+++.++|.|.+++ +|+||++||.++..  +.++...|++
T Consensus        78 -id~lv~nag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~--~~~~~~~Y~a  152 (246)
T PRK05599         78 -ISLAVVAFGILGD--QERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWR--ARRANYVYGS  152 (246)
T ss_pred             -CCEEEEecCcCCC--chhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccccc--CCcCCcchhh
Confidence             5699999998643  3355667777889999999999999999999998764 69999999999887  6678899999


Q ss_pred             HHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          211 TKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       211 sK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ||+|+++|+++|+.|+.++||+||+++||+++|++.++
T Consensus       153 sKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~  190 (246)
T PRK05599        153 TKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTG  190 (246)
T ss_pred             HHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcC
Confidence            99999999999999999999999999999999998654

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-35  Score=245.57  Aligned_cols=189  Identities=23%  Similarity=0.313  Sum_probs=159.6

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEe-CChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      ++|+++||||++|||+++|++|++.|++|++.+ |+.++.++..+++.+.  +.....+.+|+++.  ++..++++.+.+
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDNEL   80 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc--CCceEEEecccCCHHHHHHHHHHHHHHh
Confidence            589999999999999999999999999999875 6667777777777654  33467788999873  455556655543


Q ss_pred             ----cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          129 ----EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       129 ----~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                          +..++|++|||||....  .++.+.+.++|++++++|+.+++.++++++|.|++  .|+||++||.++..  +.++
T Consensus        81 ~~~~g~~~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~--~~~~  154 (252)
T PRK12747         81 QNRTGSTKFDILINNAGIGPG--AFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRI--SLPD  154 (252)
T ss_pred             hhhcCCCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc--CCeEEEECCccccc--CCCC
Confidence                22257899999998533  45778899999999999999999999999999864  48999999999987  6788


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ..+|++||+|+++++++++.|+.++||+||+|+||++.|++.++
T Consensus       155 ~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~  198 (252)
T PRK12747        155 FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAE  198 (252)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhh
Confidence            89999999999999999999999999999999999999998754

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.7e-35  Score=248.54  Aligned_cols=188  Identities=16%  Similarity=0.166  Sum_probs=155.5

Q ss_pred             cCCcEEEEECCCC--chHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           51 KYGSWALVTGPTD--GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        51 ~~gk~vlITGas~--gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      ++||+++||||++  |||+++|++|+++|++|++++|+ +++++..+++....+  ....+.+|++|  ++++.++.+.+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~   80 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLG--SDIVLPCDVAEDASIDAMFAELGK   80 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccC--CceEeecCCCCHHHHHHHHHHHHh
Confidence            4589999999986  99999999999999999999998 445555666655432  34678899997  35666677777


Q ss_pred             HhcCCCccEEEEecCCCCCcc---cccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC
Q 025260          127 AIEGLDVGVLINNVGISYPYA---RFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP  203 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~  203 (255)
                      .+++  +|++|||||+.....   .++.+.+.++|++++++|+.+++.+++.+.|.|.  ++|+||++||..+..  +.|
T Consensus        81 ~~g~--iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~g~Iv~iss~~~~~--~~~  154 (262)
T PRK07984         81 VWPK--FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN--PGSALLTLSYLGAER--AIP  154 (262)
T ss_pred             hcCC--CCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc--CCcEEEEEecCCCCC--CCC
Confidence            6664  569999999854211   1255788999999999999999999999999553  358999999988876  678


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      .+..|++||+|+.+|+++|+.|+.++||+||+|+||+++|++.+
T Consensus       155 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~  198 (262)
T PRK07984        155 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAAS  198 (262)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHh
Confidence            88999999999999999999999999999999999999998754

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.5e-35  Score=243.45  Aligned_cols=191  Identities=26%  Similarity=0.308  Sum_probs=166.4

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      ++++||+++||||++|||++++++|+++|++|++++|+++++++..+++.+.. ..++..+.+|+++.  +.++++.+.+
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~--~~~~~~~~~~   79 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH-GVDVAVHALDLSSP--EAREQLAAEA   79 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCH--HHHHHHHHHh
Confidence            34679999999999999999999999999999999999998888888776554 34677889999875  4445555555


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      +  .+|++|||||....  .++.+.+.++|++++++|+.++++++++++|.|.+++.|+||++||..+..  +.+.+..|
T Consensus        80 g--~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~--~~~~~~~y  153 (259)
T PRK06125         80 G--DIDILVNNAGAIPG--GGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGEN--PDADYICG  153 (259)
T ss_pred             C--CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccC--CCCCchHh
Confidence            5  46699999998643  568889999999999999999999999999999888789999999998876  66778899


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      +++|+|+.+|+++++.|+.+.||+||+|+||+++|++..+
T Consensus       154 ~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~  193 (259)
T PRK06125        154 SAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLT  193 (259)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHH
Confidence            9999999999999999999999999999999999997554

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=5.3e-35  Score=244.68  Aligned_cols=193  Identities=26%  Similarity=0.312  Sum_probs=162.4

Q ss_pred             EEEEECCCCchHHHHHHHHHH----cCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           55 WALVTGPTDGIGKSFAFQLAK----TGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~----~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      +++||||++|||+++|++|++    .|++|++++|+++.+++..++++...++..+..+.+|+++.  ++++++.+.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    79999999999999999888887644455788899999973  456666666665


Q ss_pred             cCC--CccEEEEecCCCCCcccccccC-CHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC--CcEEEEECCccccccCCCC
Q 025260          129 EGL--DVGVLINNVGISYPYARFFHEV-DQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK--KGAIVNIGSGAAIVIPSDP  203 (255)
Q Consensus       129 ~~~--~id~lv~nag~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~--~g~iv~vsS~~~~~~~~~~  203 (255)
                      +..  +.|++|||||..........+. +.++|++.+++|+.+++.+++.++|.|++++  +|+||++||..+..  +.+
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~--~~~  159 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQ--PFK  159 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCC--CCC
Confidence            542  3469999999754322223333 5688999999999999999999999997653  58999999998877  778


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      +...|++||+|+++|+++|+.|+.+.||+||+++||+++|+|.+..
T Consensus       160 ~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~  205 (256)
T TIGR01500       160 GWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQV  205 (256)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHH
Confidence            8899999999999999999999999999999999999999997643

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.5e-35  Score=246.76  Aligned_cols=187  Identities=20%  Similarity=0.261  Sum_probs=153.2

Q ss_pred             cCCcEEEEECC--CCchHHHHHHHHHHcCCcEEEEeCCh--hhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHH
Q 025260           51 KYGSWALVTGP--TDGIGKSFAFQLAKTGLNLVLVGRNP--DKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI  124 (255)
Q Consensus        51 ~~gk~vlITGa--s~gIG~~la~~la~~G~~V~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~  124 (255)
                      +++|+++||||  ++|||+++|++|+++|++|++++|+.  +.+++..+++     ......+.+|++|.  +++.++++
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~i~~~~~~~   79 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL-----PEPAPVLELDVTNEEHLASLADRV   79 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc-----CCCCcEEeCCCCCHHHHHHHHHHH
Confidence            56899999999  89999999999999999999999864  3334443333     12466788999973  56677777


Q ss_pred             HHHhcCCCccEEEEecCCCCCc--ccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC
Q 025260          125 KEAIEGLDVGVLINNVGISYPY--ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD  202 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~  202 (255)
                      .+.+++  +|++|||||+....  ..++.+.+.++|++++++|+.+++.+++.++|.|++  +|+||++++.. ..  +.
T Consensus        80 ~~~~g~--iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~~-~~--~~  152 (256)
T PRK07889         80 REHVDG--LDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFDA-TV--AW  152 (256)
T ss_pred             HHHcCC--CcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeecc-cc--cC
Confidence            776664  56999999986421  134678889999999999999999999999999963  48999998754 23  45


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |.+..|++||+|+.+|+++|+.|++++||+||+|+||+++|+|.+.+
T Consensus       153 ~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~  199 (256)
T PRK07889        153 PAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAI  199 (256)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcc
Confidence            77889999999999999999999999999999999999999986543

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-35  Score=244.67  Aligned_cols=186  Identities=22%  Similarity=0.246  Sum_probs=161.7

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcCCC
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGLD  132 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~~  132 (255)
                      +++||||++|||+++|++|+++|++|++++|+++++++..+++++.   ..+..+.+|++|.  +++.++++.+.+++  
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~--   76 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY---GEVYAVKADLSDKDDLKNLVKEAWELLGG--   76 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEcCCCCHHHHHHHHHHHHHhcCC--
Confidence            6999999999999999999999999999999999988888888653   2567889999873  45666666666664  


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhh-CCCcEEEEECCccccccCCCCCchhchHH
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK-RKKGAIVNIGSGAAIVIPSDPLYSVYAAT  211 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~-~~~g~iv~vsS~~~~~~~~~~~~~~Y~as  211 (255)
                      +|++|||||.......++.+.+.++|.+.+++|+.+++.+++.++|.|++ +++|+||++||.++..  +.+....|++|
T Consensus        77 id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~--~~~~~~~y~~s  154 (259)
T PRK08340         77 IDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKE--PMPPLVLADVT  154 (259)
T ss_pred             CCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCC--CCCCchHHHHH
Confidence            56999999986432345778888999999999999999999999999874 4679999999998877  67888999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          212 KAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       212 K~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      |+|+.+|+++|+.|+.++||+||+|+||+++||+.+
T Consensus       155 Kaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~  190 (259)
T PRK08340        155 RAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGAR  190 (259)
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHH
Confidence            999999999999999999999999999999999875

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=2.5e-36  Score=237.68  Aligned_cols=187  Identities=27%  Similarity=0.360  Sum_probs=166.3

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      +++||.|++|||.||||++++++|+++|.++.+.+.+.+. .+...++++..|...+.+++||+++  ++++.++++.+.
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En-~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~   80 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN-PEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT   80 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhC-HHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence            4679999999999999999999999999988877777666 5677788999999999999999998  457778888888


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC---CcEEEEECCccccccCCCCC
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK---KGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~---~g~iv~vsS~~~~~~~~~~~  204 (255)
                      ++.  +|++||+||+..          +.+|++++++|+.|.++-+...+|+|-+++   +|-|||+||..|..  |.|-
T Consensus        81 fg~--iDIlINgAGi~~----------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~--P~p~  146 (261)
T KOG4169|consen   81 FGT--IDILINGAGILD----------DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLD--PMPV  146 (261)
T ss_pred             hCc--eEEEEccccccc----------chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccC--cccc
Confidence            886  559999999973          355999999999999999999999997664   57899999999999  8899


Q ss_pred             chhchHHHHHHHHHHHHHHHHH--ccCCceEEEeeeeeeeeCCcchhhh
Q 025260          205 YSVYAATKAYIDQFSRSLYVEY--RKSGIDVQCQVLFLLCFYNLNDLVM  251 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~--~~~gi~v~~v~Pg~v~T~~~~~~~~  251 (255)
                      .+.|++||+++.+|+|+|+.+.  .+.||+++++|||+++|.+.+++.+
T Consensus       147 ~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~  195 (261)
T KOG4169|consen  147 FPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDA  195 (261)
T ss_pred             chhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHh
Confidence            9999999999999999998874  5679999999999999999999865

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=9.4e-35  Score=242.75  Aligned_cols=191  Identities=25%  Similarity=0.319  Sum_probs=166.9

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++...  +.++..+.+|++|.  +++.++.+.+.
T Consensus         6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (254)
T PRK08085          6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE--GIKAHAAPFNVTHKQEVEAAIEHIEKD   83 (254)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEecCCCCHHHHHHHHHHHHHh
Confidence            456999999999999999999999999999999999998888888777654  34567788999874  45556666666


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|++|||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..  +.+....
T Consensus        84 ~~~--id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~~  157 (254)
T PRK08085         84 IGP--IDVLINNAGIQRR--HPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSEL--GRDTITP  157 (254)
T ss_pred             cCC--CCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhcc--CCCCCcc
Confidence            664  6699999998643  457788999999999999999999999999999887789999999988877  6677889


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      |++||+|+++++++++.|+.++||+||+|+||+++|++.++
T Consensus       158 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~  198 (254)
T PRK08085        158 YAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKA  198 (254)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhh
Confidence            99999999999999999999999999999999999998765

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=1.3e-34  Score=242.23  Aligned_cols=194  Identities=23%  Similarity=0.357  Sum_probs=171.9

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+..++.++..+.+|+++.  +++.++++.+.
T Consensus         6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (257)
T PRK09242          6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH   85 (257)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4569999999999999999999999999999999999998888888887765566788999999873  45666777777


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|++|||||....  .+..+.+.+++++.+++|+.+++.++++++|.|.+++.|+||++||..+..  +.+....
T Consensus        86 ~g~--id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~--~~~~~~~  159 (257)
T PRK09242         86 WDG--LHILVNNAGGNIR--KAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLT--HVRSGAP  159 (257)
T ss_pred             cCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCC--CCCCCcc
Confidence            775  5599999998643  457788999999999999999999999999999888889999999998887  6677889


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |++||+++++++++++.|+.+.||+|++++||+++|++.++.
T Consensus       160 Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~  201 (257)
T PRK09242        160 YGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGP  201 (257)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccc
Confidence            999999999999999999999999999999999999997643

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-35  Score=250.52  Aligned_cols=192  Identities=22%  Similarity=0.199  Sum_probs=162.4

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+..++..+.++.+|++|  +++++++++.+.
T Consensus        11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~   90 (313)
T PRK05854         11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE   90 (313)
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            477999999999999999999999999999999999999999999988877666678899999997  456666776666


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC-------
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP-------  200 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~-------  200 (255)
                      ++  ++|+||||||+...   +..+.+.++++.++++|+.|++.+++.++|.|.+. .++||++||.++....       
T Consensus        91 ~~--~iD~li~nAG~~~~---~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~~~  164 (313)
T PRK05854         91 GR--PIHLLINNAGVMTP---PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDDLN  164 (313)
T ss_pred             CC--CccEEEECCccccC---CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCccccc
Confidence            55  46699999998643   23456788999999999999999999999988654 6899999998875421       


Q ss_pred             ---CCCCchhchHHHHHHHHHHHHHHHHH--ccCCceEEEeeeeeeeeCCcc
Q 025260          201 ---SDPLYSVYAATKAYIDQFSRSLYVEY--RKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       201 ---~~~~~~~Y~asK~al~~~~~~l~~e~--~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                         +.++...|+.||+|+..|++.|++++  ...||+||+++||++.|++..
T Consensus       165 ~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~  216 (313)
T PRK05854        165 WERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLA  216 (313)
T ss_pred             ccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccc
Confidence               12456789999999999999999865  356899999999999999874

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-34  Score=242.44  Aligned_cols=191  Identities=21%  Similarity=0.303  Sum_probs=165.3

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      ++++||+++||||++|||+++|++|+++|++|++++|+ ++.++..+++.+.  +.++..+.+|+++.  +++.++++.+
T Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   87 (258)
T PRK06935         11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE--GRKVTFVQVDLTKPESAEKVVKEALE   87 (258)
T ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            34679999999999999999999999999999999998 5566665555443  34578899999973  4566777777


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .++.  +|++|||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..  +.+...
T Consensus        88 ~~g~--id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~  161 (258)
T PRK06935         88 EFGK--IDILVNNAGTIRR--APLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQ--GGKFVP  161 (258)
T ss_pred             HcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhcc--CCCCch
Confidence            7764  5699999998643  557788899999999999999999999999999988889999999998877  667788


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      .|++||+|++++++++++|+.++||+||+|+||+++|++.+.
T Consensus       162 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~  203 (258)
T PRK06935        162 AYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAP  203 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhh
Confidence            999999999999999999999999999999999999998654

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=1.8e-34  Score=244.39  Aligned_cols=191  Identities=25%  Similarity=0.316  Sum_probs=164.4

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+.+..++..+++..   ..++..+.+|++|.  +++.++.+.+.
T Consensus        15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~~   91 (280)
T PLN02253         15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG---EPNVCFFHCDVTVEDDVSRAVDFTVDK   91 (280)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC---CCceEEEEeecCCHHHHHHHHHHHHHH
Confidence            35699999999999999999999999999999999998777766665532   34678899999973  46666777777


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|++|||||.......++.+.+.+++++++++|+.++++++++++|.|.++++|+||+++|..+..  +.++...
T Consensus        92 ~g~--id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~--~~~~~~~  167 (280)
T PLN02253         92 FGT--LDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAI--GGLGPHA  167 (280)
T ss_pred             hCC--CCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcc--cCCCCcc
Confidence            764  569999999864322457788999999999999999999999999999887789999999998877  5567789


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      |++||+|+++++++++.|+.++||+|++++||++.|++..
T Consensus       168 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~  207 (280)
T PLN02253        168 YTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALAL  207 (280)
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccc
Confidence            9999999999999999999999999999999999999753

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=1.7e-34  Score=244.35  Aligned_cols=195  Identities=28%  Similarity=0.361  Sum_probs=168.6

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.+.  +.++..+.+|+++.  +++.++++.+
T Consensus         6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~   83 (278)
T PRK08277          6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA--GGEALAVKADVLDKESLEQARQQILE   83 (278)
T ss_pred             eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            3567999999999999999999999999999999999998888887777653  34678899999874  4556666666


Q ss_pred             HhcCCCccEEEEecCCCCCc-------------ccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECC
Q 025260          127 AIEGLDVGVLINNVGISYPY-------------ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGS  193 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~-------------~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS  193 (255)
                      .+++  +|++|||||...+.             ..++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||
T Consensus        84 ~~g~--id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS  161 (278)
T PRK08277         84 DFGP--CDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISS  161 (278)
T ss_pred             HcCC--CCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence            6664  55999999975331             12466788999999999999999999999999998888899999999


Q ss_pred             ccccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          194 GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       194 ~~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ..+..  +.++...|++||+|+++|+++++.|+.+.||+||+|+||++.|++.+.+
T Consensus       162 ~~~~~--~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~  215 (278)
T PRK08277        162 MNAFT--PLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRAL  215 (278)
T ss_pred             chhcC--CCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhh
Confidence            99987  7788899999999999999999999999999999999999999986643

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=1.5e-34  Score=241.55  Aligned_cols=191  Identities=21%  Similarity=0.278  Sum_probs=162.7

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      ++++||+++||||++|||+++|++|+++|++|++++++..  ++..+++.+.  +.++..+.+|++|  ++++.++++.+
T Consensus         6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   81 (253)
T PRK08993          6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTAL--GRRFLSLTADLRKIDGIPALLERAVA   81 (253)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4567999999999999999999999999999999887643  3444555443  3467888999987  45667777777


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCc
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~  205 (255)
                      .+++  +|++|||||....  .++.+.+.++|++.+++|+.+++.++++++|.|++++ +|+||++||..+..  +.+..
T Consensus        82 ~~~~--~D~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~  155 (253)
T PRK08993         82 EFGH--IDILVNNAGLIRR--EDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQ--GGIRV  155 (253)
T ss_pred             HhCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhcc--CCCCC
Confidence            7774  5699999998643  4577889999999999999999999999999998764 58999999998887  66778


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ..|++||+|+++++++++.|+.++||+||.++||+++|++.+++
T Consensus       156 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~  199 (253)
T PRK08993        156 PSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQL  199 (253)
T ss_pred             cchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhh
Confidence            89999999999999999999999999999999999999987654

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-34  Score=239.76  Aligned_cols=194  Identities=23%  Similarity=0.278  Sum_probs=168.3

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      +++++|+++||||++|||.+++++|+++|++|++++|+.+++++..+++.+..  .....+.+|+++.  +++.++++.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~   81 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAG--GKAEALACHIGEMEQIDALFAHIRE   81 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            35679999999999999999999999999999999999988888888876542  3567789999874  4556677777


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .++.  +|++|||||.... ..++.+.+.+++++.+++|+.+++.++++++|+|++++.++|+++||..+..  +.++..
T Consensus        82 ~~~~--id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~  156 (252)
T PRK07035         82 RHGR--LDILVNNAAANPY-FGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVS--PGDFQG  156 (252)
T ss_pred             HcCC--CCEEEECCCcCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcC--CCCCCc
Confidence            7764  5699999997532 2456788999999999999999999999999999888889999999998877  678889


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .|++||+++++|+++++.|+.++||+|++++||+++|++.+..
T Consensus       157 ~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~  199 (252)
T PRK07035        157 IYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASAL  199 (252)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccc
Confidence            9999999999999999999999999999999999999987643

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-34  Score=241.70  Aligned_cols=194  Identities=23%  Similarity=0.320  Sum_probs=170.5

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK  125 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~  125 (255)
                      .+++++|+++||||++|||++++++|+++|++|++.+|+++++++..+++++.  +.++..+.+|+++.  ++++++++.
T Consensus         5 ~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   82 (265)
T PRK07097          5 LFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL--GIEAHGYVCDVTDEDGVQAMVSQIE   82 (265)
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            44567999999999999999999999999999999999999888877777654  34678899999974  466667777


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCc
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~  205 (255)
                      +.++  ++|++|||||....  .++.+.+.+++++++++|+.+++.+++.++|.|++++.|+||++||..+..  +.+..
T Consensus        83 ~~~~--~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~  156 (265)
T PRK07097         83 KEVG--VIDILVNNAGIIKR--IPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSEL--GRETV  156 (265)
T ss_pred             HhCC--CCCEEEECCCCCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccC--CCCCC
Confidence            7666  46699999998754  467788999999999999999999999999999888889999999988877  66788


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ..|++||+|+.++++++++|+.++||+|++|+||++.|++..+.
T Consensus       157 ~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  200 (265)
T PRK07097        157 SAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPL  200 (265)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhh
Confidence            99999999999999999999999999999999999999987554

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-34  Score=242.17  Aligned_cols=186  Identities=24%  Similarity=0.275  Sum_probs=160.9

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      +++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++..+.+|+++.  +++.++++.+.+
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-----GERARFIATDITDDAAIERAVATVVARF   78 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeeEEEEecCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999988777766554     33577889999974  456667777777


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++  +|++|||||....  .. .+.+.++|++.+++|+.+++.++++++|.|+ ++.|+||++||.++..  +.++...|
T Consensus        79 g~--id~lv~~ag~~~~--~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~--~~~~~~~Y  150 (261)
T PRK08265         79 GR--VDILVNLACTYLD--DG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKF--AQTGRWLY  150 (261)
T ss_pred             CC--CCEEEECCCCCCC--Cc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhcc--CCCCCchh
Confidence            75  5699999998643  22 3568899999999999999999999999997 6679999999999887  66788999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ++||+|+.+++++++.|+.++||+||+|+||+++|++.++.
T Consensus       151 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~  191 (261)
T PRK08265        151 PASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDEL  191 (261)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhh
Confidence            99999999999999999999999999999999999987653

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-34  Score=240.16  Aligned_cols=193  Identities=27%  Similarity=0.335  Sum_probs=169.6

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      .+++|+++||||++|||.+++++|+++|++|++++|+.+++++..+++.+.  +.++..+.+|+++.  +++.++++.+.
T Consensus         4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~   81 (253)
T PRK06172          4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA--GGEALFVACDVTRDAEVKALVEQTIAA   81 (253)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            356999999999999999999999999999999999998888887777654  34678889999873  45666777777


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|++|||||.... ..++.+.+.+++++.+++|+.+++.++++++|.|.+++.+++|++||..+..  +.++...
T Consensus        82 ~g~--id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~--~~~~~~~  156 (253)
T PRK06172         82 YGR--LDYAFNNAGIEIE-QGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLG--AAPKMSI  156 (253)
T ss_pred             hCC--CCEEEECCCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcc--CCCCCch
Confidence            764  5699999998643 2346788999999999999999999999999999888889999999999887  6788999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |++||+|+++|+++++.|+.++||+|++++||+++|++.+..
T Consensus       157 Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~  198 (253)
T PRK06172        157 YAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRA  198 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhh
Confidence            999999999999999999999999999999999999998764

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-34  Score=240.01  Aligned_cols=192  Identities=23%  Similarity=0.293  Sum_probs=167.5

Q ss_pred             cCCcEEEEECCCC-chHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           51 KYGSWALVTGPTD-GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        51 ~~gk~vlITGas~-gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      .++|+++||||+| |||++++++|+++|++|++++|+.+++++..+++++..+..++..+.+|+++.  +++.++.+.+.
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   94 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER   94 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5689999999985 99999999999999999999999998888888887654445678889999873  45566666666


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCch
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      ++  .+|++|||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|++++ .|+||+++|..+..  +.++..
T Consensus        95 ~g--~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~--~~~~~~  168 (262)
T PRK07831         95 LG--RLDVLVNNAGLGGQ--TPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWR--AQHGQA  168 (262)
T ss_pred             cC--CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC--CCCCCc
Confidence            66  46699999998643  5678889999999999999999999999999998776 79999999988877  667889


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      .|++||+|+++|+++++.|+.++||+||+|+||++.||+.+.
T Consensus       169 ~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~  210 (262)
T PRK07831        169 HYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAK  210 (262)
T ss_pred             chHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccc
Confidence            999999999999999999999999999999999999998754

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-34  Score=242.91  Aligned_cols=188  Identities=21%  Similarity=0.297  Sum_probs=164.9

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++|++++||||++|||++++++|+++|++|++.+|+++++++..+++.      .+..+.+|++|.  +++.++++.+.
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~   75 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG------LVVGGPLDVTDPASFAAFLDAVEAD   75 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------cceEEEccCCCHHHHHHHHHHHHHH
Confidence            3458999999999999999999999999999999999988877665542      356788999873  45566777766


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++  ++|++|||||+...  .++.+.+.+++++++++|+.+++.+++.++|.|++++.|+||++||..+..  +.++...
T Consensus        76 ~~--~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~  149 (273)
T PRK07825         76 LG--PIDVLVNNAGVMPV--GPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKI--PVPGMAT  149 (273)
T ss_pred             cC--CCCEEEECCCcCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccC--CCCCCcc
Confidence            66  46699999998754  557788999999999999999999999999999998899999999999887  6788999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |++||+++.+|+++|+.|+.+.||++++|+||++.|++.+..
T Consensus       150 Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~  191 (273)
T PRK07825        150 YCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGT  191 (273)
T ss_pred             hHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccc
Confidence            999999999999999999999999999999999999987654

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=1.5e-34  Score=242.34  Aligned_cols=178  Identities=25%  Similarity=0.336  Sum_probs=156.8

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      ++||+++||||++|||+++|++|+++|++|++.+|+++..             .++..+.+|++|.  +++.++++.+.+
T Consensus         4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-------------~~~~~~~~D~~~~~~i~~~~~~~~~~~   70 (258)
T PRK06398          4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-------------NDVDYFKVDVSNKEQVIKGIDYVISKY   70 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-------------CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5699999999999999999999999999999999986431             2467889999973  466667777766


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++  +|++|||||....  .++.+.+.++|++++++|+.|++.++++++|+|++++.|+||++||..+..  +.++...|
T Consensus        71 ~~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~Y  144 (258)
T PRK06398         71 GR--IDILVNNAGIESY--GAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFA--VTRNAAAY  144 (258)
T ss_pred             CC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhcc--CCCCCchh
Confidence            64  5699999998643  568889999999999999999999999999999888889999999999887  67888999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++||+|+++|+++++.|+.+. |+||+|+||+++|++.+.
T Consensus       145 ~~sKaal~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~  183 (258)
T PRK06398        145 VTSKHAVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEW  183 (258)
T ss_pred             hhhHHHHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhh
Confidence            999999999999999999875 999999999999998754

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.5e-34  Score=239.11  Aligned_cols=191  Identities=25%  Similarity=0.275  Sum_probs=161.1

Q ss_pred             ccCCcEEEEECCC--CchHHHHHHHHHHcCCcEEEEeCC-----------hhhHHHHHHHHHhhcCCceEEEEEEECCCC
Q 025260           50 RKYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRN-----------PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD  116 (255)
Q Consensus        50 ~~~gk~vlITGas--~gIG~~la~~la~~G~~V~l~~r~-----------~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  116 (255)
                      +++||+++||||+  +|||+++|++|+++|++|++.+|+           .++.++..+++++.  +.++..+.+|+++.
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~   80 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN--GVKVSSMELDLTQN   80 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc--CCeEEEEEcCCCCH
Confidence            3669999999999  599999999999999999998643           22333444555543  45678889999874


Q ss_pred             --cHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCc
Q 025260          117 --LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSG  194 (255)
Q Consensus       117 --~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~  194 (255)
                        +++.++++.+.++  ++|++|||||....  .++.+.+.++|++.+++|+.+++.++++++|.|.+++.|+||++||.
T Consensus        81 ~~i~~~~~~~~~~~g--~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~  156 (256)
T PRK12859         81 DAPKELLNKVTEQLG--YPHILVNNAAYSTN--NDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSG  156 (256)
T ss_pred             HHHHHHHHHHHHHcC--CCcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEccc
Confidence              4666677777666  46699999998643  56788999999999999999999999999999988778999999999


Q ss_pred             cccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          195 AAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       195 ~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      .+..  +.++...|++||+|+.+|+++++.|+.++||+|++|+||+++|++..+
T Consensus       157 ~~~~--~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~  208 (256)
T PRK12859        157 QFQG--PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE  208 (256)
T ss_pred             ccCC--CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCH
Confidence            9877  678899999999999999999999999999999999999999997543

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-34  Score=244.43  Aligned_cols=184  Identities=23%  Similarity=0.268  Sum_probs=158.7

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~  130 (255)
                      +|+++||||++|||+++|++|+++|++|++++|+.+.+++..+        ..+..+.+|++|.  +++.++++.+.+++
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~--------~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g   75 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA--------EGLEAFQLDYAEPESIAALVAQVLELSGG   75 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------CCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999999877654432        1356788999874  34455555554432


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchH
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA  210 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~a  210 (255)
                       ++|++|||||....  .++.+.+.+++++++++|+.|++.+++.++|.|.+++.|+||++||..+..  +.+....|++
T Consensus        76 -~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~--~~~~~~~Y~a  150 (277)
T PRK05993         76 -RLDALFNNGAYGQP--GAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLV--PMKYRGAYNA  150 (277)
T ss_pred             -CccEEEECCCcCCC--CCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcC--CCCccchHHH
Confidence             57799999998754  557888999999999999999999999999999888889999999999887  6788899999


Q ss_pred             HHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          211 TKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       211 sK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ||+|+++|+++|+.|+.++||+|++|+||+++|++.++.
T Consensus       151 sK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~  189 (277)
T PRK05993        151 SKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANA  189 (277)
T ss_pred             HHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHH
Confidence            999999999999999999999999999999999987653

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.4e-35  Score=247.44  Aligned_cols=193  Identities=18%  Similarity=0.176  Sum_probs=147.4

Q ss_pred             cccCCcEEEEECCC--CchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHh--------hcCCc-----eEEEEEEEC
Q 025260           49 LRKYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQA--------KYAKT-----QIKSVVVDF  113 (255)
Q Consensus        49 ~~~~gk~vlITGas--~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~--------~~~~~-----~~~~~~~d~  113 (255)
                      .+++||+++||||+  +|||+++|++|+++|++|++.++.+ .+....+...+        .....     ++..++.|+
T Consensus         4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~   82 (299)
T PRK06300          4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASF   82 (299)
T ss_pred             cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhc
Confidence            45679999999996  9999999999999999999987652 11111111100        00000     111122332


Q ss_pred             CC--------------------CcHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHH
Q 025260          114 SG--------------------DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT  173 (255)
Q Consensus       114 ~~--------------------~~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~  173 (255)
                      ++                    ++++.++++.+.+++  +|+||||||.......++.+.+.++|++.+++|+.|+++++
T Consensus        83 ~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~--lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~  160 (299)
T PRK06300         83 DTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGH--IDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLL  160 (299)
T ss_pred             CCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCC--CcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            22                    246667777777775  55999999975322356889999999999999999999999


Q ss_pred             HHHhhhhhhCCCcEEEEECCccccccCCCCCch-hchHHHHHHHHHHHHHHHHHcc-CCceEEEeeeeeeeeCCcch
Q 025260          174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS-VYAATKAYIDQFSRSLYVEYRK-SGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       174 ~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~-~Y~asK~al~~~~~~l~~e~~~-~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++++|.|++  +|+||+++|..+..  +.|.+. .|++||+|+.+|+++|+.|+++ +||+||+|+||+++|++.+.
T Consensus       161 ~a~~p~m~~--~G~ii~iss~~~~~--~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~  233 (299)
T PRK06300        161 SHFGPIMNP--GGSTISLTYLASMR--AVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKA  233 (299)
T ss_pred             HHHHHHhhc--CCeEEEEeehhhcC--cCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhc
Confidence            999999964  48999999988877  567664 8999999999999999999987 59999999999999998753

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7e-34  Score=242.47  Aligned_cols=195  Identities=29%  Similarity=0.404  Sum_probs=164.0

Q ss_pred             cccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHH
Q 025260           47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI  124 (255)
Q Consensus        47 ~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~  124 (255)
                      .....++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++..+.+|++|.  +++.++.+
T Consensus        34 ~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~  111 (293)
T PRK05866         34 QPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA--GGDAMAVPCDLSDLDAVDALVADV  111 (293)
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence            344567899999999999999999999999999999999999888888877654  34567889999873  45566666


Q ss_pred             HHHhcCCCccEEEEecCCCCCcccccccC--CHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC
Q 025260          125 KEAIEGLDVGVLINNVGISYPYARFFHEV--DQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD  202 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~~~~~~--~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~  202 (255)
                      .+.++  ++|++|||||....  .++.+.  +.+++++.+++|+.|++.++++++|.|++++.|+||++||.++... +.
T Consensus       112 ~~~~g--~id~li~~AG~~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-~~  186 (293)
T PRK05866        112 EKRIG--GVDILINNAGRSIR--RPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSE-AS  186 (293)
T ss_pred             HHHcC--CCCEEEECCCCCCC--cchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC-CC
Confidence            66666  46699999998754  334432  4578899999999999999999999998888899999999765431 35


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      |....|++||+|+++|+++++.|+.++||+|++++||+++|++.+.
T Consensus       187 p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~  232 (293)
T PRK05866        187 PLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAP  232 (293)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccc
Confidence            6778999999999999999999999999999999999999999864

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-34  Score=247.18  Aligned_cols=190  Identities=26%  Similarity=0.337  Sum_probs=167.8

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      +++|+++||||++|||++++++|+++|++|++++|+++++++..+++++.  +.++..+.+|++|.  +++.++.+.+.+
T Consensus         6 l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~--g~~~~~v~~Dv~d~~~v~~~~~~~~~~~   83 (334)
T PRK07109          6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA--GGEALAVVADVADAEAVQAAADRAEEEL   83 (334)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence            45899999999999999999999999999999999999998888888764  34678889999973  456667777777


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++  +|++|||||....  .++.+.+.+++++.+++|+.+++++++.++|.|++++.|+||++||..+..  +.+....|
T Consensus        84 g~--iD~lInnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~--~~~~~~~Y  157 (334)
T PRK07109         84 GP--IDTWVNNAMVTVF--GPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYR--SIPLQSAY  157 (334)
T ss_pred             CC--CCEEEECCCcCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhcc--CCCcchHH
Confidence            74  5699999998643  557889999999999999999999999999999988889999999999988  67888999


Q ss_pred             hHHHHHHHHHHHHHHHHHcc--CCceEEEeeeeeeeeCCcch
Q 025260          209 AATKAYIDQFSRSLYVEYRK--SGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~--~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++||+|+++|+++++.|+..  .+|+|++|+||.++||+.+.
T Consensus       158 ~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~  199 (334)
T PRK07109        158 CAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDW  199 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhh
Confidence            99999999999999999975  47999999999999998754

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=1.2e-33  Score=236.35  Aligned_cols=189  Identities=23%  Similarity=0.329  Sum_probs=165.4

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~  130 (255)
                      +|+++||||++|||++++++|+++|++|++++|+.+..++..+++.+.  +.++..+.+|+++.  +++.++++.+.+++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD--GGKAIAVKADVSDRDQVFAAVRQVVDTFGD   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            789999999999999999999999999999999998888887777654  34677899999984  45666777776664


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCchhch
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYA  209 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~Y~  209 (255)
                        +|++|||||+...  .++.+.+.+++++.+++|+.+++.+++.++|.|++.+ .|+||++||..+..  +.++...|+
T Consensus        80 --id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~Y~  153 (256)
T PRK08643         80 --LNVVVNNAGVAPT--TPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVV--GNPELAVYS  153 (256)
T ss_pred             --CCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccccc--CCCCCchhH
Confidence              5699999998643  4577889999999999999999999999999997754 58999999998877  667888999


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      +||++++.|++.++.|+.++||+|++|+||+++||++.+.
T Consensus       154 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~  193 (256)
T PRK08643        154 STKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDI  193 (256)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHH
Confidence            9999999999999999999999999999999999987653

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=9.9e-34  Score=236.69  Aligned_cols=192  Identities=24%  Similarity=0.409  Sum_probs=168.4

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++.+|+++++++..+++++.  +.++..+.+|++|.  +++.++++.+.
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ--GLSAHALAFDVTDHDAVRAAIDAFEAE   84 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CceEEEEEccCCCHHHHHHHHHHHHHh
Confidence            467999999999999999999999999999999999998888877777654  34578899999973  45666666666


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++.  +|++|||||....  .++.+.+.++|++++++|+.+++++++.+.|.|.+++.|+||++||..+..  +.++...
T Consensus        85 ~~~--~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~--~~~~~~~  158 (255)
T PRK07523         85 IGP--IDILVNNAGMQFR--TPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSAL--ARPGIAP  158 (255)
T ss_pred             cCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhcc--CCCCCcc
Confidence            664  5699999998754  567888999999999999999999999999999888889999999988877  6678899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |+++|+++++++++++.|++++||+|++++||+++|++.++.
T Consensus       159 y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~  200 (255)
T PRK07523        159 YTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAAL  200 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhh
Confidence            999999999999999999999999999999999999987643

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=4.7e-34  Score=239.67  Aligned_cols=186  Identities=19%  Similarity=0.250  Sum_probs=154.3

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+.    . +.++..+.+|+++.  +++.++++.+.
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~----~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA----H-GDAVVGVEGDVRSLDDHKEAVARCVAA   76 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh----c-CCceEEEEeccCCHHHHHHHHHHHHHH
Confidence            35699999999999999999999999999999999998776654432    1 34577889999873  46667777777


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCH----HHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQ----VLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP  203 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~----~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~  203 (255)
                      +++  +|++|||||+... ..++.+.+.    ++|++.+++|+.+++.++++++|.|.++ +|++|+++|..+..  +.+
T Consensus        77 ~g~--id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~~sS~~~~~--~~~  150 (262)
T TIGR03325        77 FGK--IDCLIPNAGIWDY-STALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS-RGSVIFTISNAGFY--PNG  150 (262)
T ss_pred             hCC--CCEEEECCCCCcc-CCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc-CCCEEEEeccceec--CCC
Confidence            774  5599999997532 123334333    4799999999999999999999999765 48999999988877  667


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      +...|++||+|+++|+++++.|+.++ |+||+|+||++.|+|.+
T Consensus       151 ~~~~Y~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~  193 (262)
T TIGR03325       151 GGPLYTAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRG  193 (262)
T ss_pred             CCchhHHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCcc
Confidence            78899999999999999999999886 99999999999999865

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=1.1e-33  Score=235.44  Aligned_cols=189  Identities=25%  Similarity=0.330  Sum_probs=159.5

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||.++|++|+++|++|++++|+..  ++..+.+.+.  +.++..+.+|+++.  +.+.++++.+.
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEAL--GRRFLSLTADLSDIEAIKALVDSAVEE   77 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            356999999999999999999999999999999999753  3344444433  34578889999874  35555666665


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCch
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      ++  ++|++|||||...+  .++.+.+.++|++.+++|+.+++.+++.++|.|++++ .|+||++||..+..  +.+...
T Consensus        78 ~~--~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~~  151 (248)
T TIGR01832        78 FG--HIDILVNNAGIIRR--ADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQ--GGIRVP  151 (248)
T ss_pred             cC--CCCEEEECCCCCCC--CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhcc--CCCCCc
Confidence            55  46699999998754  4567888999999999999999999999999998765 78999999998877  567788


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      .|++||+|+++++++++.|+.++||+||+++||++.|++.++
T Consensus       152 ~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~  193 (248)
T TIGR01832       152 SYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQA  193 (248)
T ss_pred             hhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhc
Confidence            999999999999999999999999999999999999998764

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=1.8e-33  Score=235.18  Aligned_cols=192  Identities=27%  Similarity=0.320  Sum_probs=165.9

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK  125 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~  125 (255)
                      ++++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++++.  +.++..+.+|+++.  +++.++.+.
T Consensus         6 ~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~   83 (255)
T PRK06113          6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFAL   83 (255)
T ss_pred             ccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            34567999999999999999999999999999999999998888877777654  34577889999974  455666666


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCc
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~  205 (255)
                      +.+++  +|++|||||...+  .++ +.+.+++++.+++|+.++++++++++|.|.+++.|+||++||..+..  +.++.
T Consensus        84 ~~~~~--~d~li~~ag~~~~--~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~  156 (255)
T PRK06113         84 SKLGK--VDILVNNAGGGGP--KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN--KNINM  156 (255)
T ss_pred             HHcCC--CCEEEECCCCCCC--CCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccC--CCCCc
Confidence            66664  6699999998643  233 67889999999999999999999999999877778999999999887  66788


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ..|++||+|+++|+++++.|+.++||+||+++||+++|++.+.
T Consensus       157 ~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~  199 (255)
T PRK06113        157 TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS  199 (255)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeccccccccccc
Confidence            8999999999999999999999999999999999999998764

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=1.6e-33  Score=241.12  Aligned_cols=188  Identities=24%  Similarity=0.280  Sum_probs=160.3

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh--hHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD--KLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      ++||+++||||++|||+++|++|+++|++|++..++.+  ..++..+++++.  +.++..+.+|+++  +++++++++.+
T Consensus        53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~  130 (300)
T PRK06128         53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE--GRKAVALPGDLKDEAFCRQLVERAVK  130 (300)
T ss_pred             cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999887643  345555555543  3457788999997  35667777777


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .+++  +|++|||||.... ..++.+.+.++|++.+++|+.++++++++++|.|.+  +++||++||..++.  +.++..
T Consensus       131 ~~g~--iD~lV~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~~--~~~~~~  203 (300)
T PRK06128        131 ELGG--LDILVNIAGKQTA-VKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQ--PSPTLL  203 (300)
T ss_pred             HhCC--CCEEEECCcccCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCccccC--CCCCch
Confidence            7775  5599999998543 245778899999999999999999999999998853  47999999999887  677889


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      .|++||+|+++|+++|+.|+.++||+||+|+||+++|++..
T Consensus       204 ~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~  244 (300)
T PRK06128        204 DYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQP  244 (300)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcc
Confidence            99999999999999999999999999999999999999864

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9e-34  Score=237.01  Aligned_cols=186  Identities=30%  Similarity=0.367  Sum_probs=155.6

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      .++||+++||||++|||+++|++|+++|++|++.+++.++..   +++.+.    .+..+.+|++|.  +++.++++.+.
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~---~~l~~~----~~~~~~~Dl~~~~~~~~~~~~~~~~   76 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEA---KELREK----GVFTIKCDVGNRDQVKKSKEVVEKE   76 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHH---HHHHhC----CCeEEEecCCCHHHHHHHHHHHHHH
Confidence            456999999999999999999999999999998876544322   223221    357789999873  45666777776


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|++|||||....  .++.+.+.++|++++++|+.+++++++.++|.|++++.|+||++||..+... +.++...
T Consensus        77 ~~~--id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~-~~~~~~~  151 (255)
T PRK06463         77 FGR--VDVLVNNAGIMYL--MPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGT-AAEGTTF  151 (255)
T ss_pred             cCC--CCEEEECCCcCCC--CChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCC-CCCCccH
Confidence            664  5699999998643  4577889999999999999999999999999998777899999999887642 3456788


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      |++||+|+++|+++++.|+.++||+||+++||+++|++..
T Consensus       152 Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~  191 (255)
T PRK06463        152 YAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTL  191 (255)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhh
Confidence            9999999999999999999999999999999999999864

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.2e-34  Score=242.58  Aligned_cols=194  Identities=26%  Similarity=0.268  Sum_probs=166.7

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIK  125 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~  125 (255)
                      ..+..|++++||||++|||+++|++|+++|++|++.+|+.++.+++++++++..++..+.++.+|+++  ++.++++.++
T Consensus        30 ~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~  109 (314)
T KOG1208|consen   30 GIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFK  109 (314)
T ss_pred             cccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            34567999999999999999999999999999999999999999999999987778889999999997  5677777777


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccc----c--
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV----I--  199 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~----~--  199 (255)
                      +..+  ++|++|||||+..+.    ...+.|.+|.+|.+|++|++.+++.++|.|++..++|||++||..+..    .  
T Consensus       110 ~~~~--~ldvLInNAGV~~~~----~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l  183 (314)
T KOG1208|consen  110 KKEG--PLDVLINNAGVMAPP----FSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDL  183 (314)
T ss_pred             hcCC--CccEEEeCcccccCC----cccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhc
Confidence            6555  466999999998652    266778999999999999999999999999888779999999988611    0  


Q ss_pred             --CC---CCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          200 --PS---DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       200 --~~---~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                        +.   ......|+.||.|+..+++.|++.+.. ||.+++++||.+.|+...+
T Consensus       184 ~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r  236 (314)
T KOG1208|consen  184 SGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSR  236 (314)
T ss_pred             cchhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceec
Confidence              00   222345999999999999999999988 9999999999999994433

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=2e-33  Score=235.46  Aligned_cols=185  Identities=29%  Similarity=0.325  Sum_probs=156.7

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      +++|+++||||++|||+++|++|+++|++|++++|++. .++..+++.+.  +.++..+.+|+++.  +++.++++.+.+
T Consensus         6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK12823          6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAA--GGEALALTADLETYAGAQAAMAAAVEAF   82 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhc--CCeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            56999999999999999999999999999999999853 44555555443  34577889999973  456666666666


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      +  ++|++|||||.... ..++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..    +...+|
T Consensus        83 ~--~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~----~~~~~Y  155 (260)
T PRK12823         83 G--RIDVLINNVGGTIW-AKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG----INRVPY  155 (260)
T ss_pred             C--CCeEEEECCccccC-CCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC----CCCCcc
Confidence            6  46699999996432 2557788999999999999999999999999999888889999999987653    345689


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                      ++||+|+++|+++++.|+.++||+|++|+||++.||+
T Consensus       156 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  192 (260)
T PRK12823        156 SAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPP  192 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcc
Confidence            9999999999999999999999999999999999986

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=1.6e-33  Score=240.31  Aligned_cols=187  Identities=23%  Similarity=0.222  Sum_probs=157.5

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh--hhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP--DKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      ++||+++||||++|||+++|++|+++|++|++.+|+.  +..++..+.+.+.  +.++..+.+|++|.  +++.++++.+
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~  124 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC--GRKAVLLPGDLSDEKFARSLVHEAHK  124 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            6689999999999999999999999999999988753  3444544444333  34577889999873  4666677777


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .+++  +|++|||||.... ..++.+.+.++|++++++|+.++++++++++|.|.+  .|+||++||..+..  +.+...
T Consensus       125 ~~g~--id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~iSS~~~~~--~~~~~~  197 (294)
T PRK07985        125 ALGG--LDIMALVAGKQVA-IPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK--GASIITTSSIQAYQ--PSPHLL  197 (294)
T ss_pred             HhCC--CCEEEECCCCCcC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--CCEEEEECCchhcc--CCCCcc
Confidence            7764  5599999997532 245778899999999999999999999999999854  48999999999887  678889


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                      +|++||+|+++++++++.|+.++||+||+|+||++.|++.
T Consensus       198 ~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~  237 (294)
T PRK07985        198 DYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQ  237 (294)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccc
Confidence            9999999999999999999999999999999999999985

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-33  Score=237.32  Aligned_cols=185  Identities=19%  Similarity=0.228  Sum_probs=155.9

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      ++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     ..++..+.+|+++.  +++.++++.+.+
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF-----GDHVLVVEGDVTSYADNQRAVDQTVDAF   78 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHhc
Confidence            45899999999999999999999999999999999988777665543     23567889999873  466677777766


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHH----HHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVL----LKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~----~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                      ++  +|++|||||+... ..++.+.+.++    |++++++|+.+++.+++.++|.|.++ +|+||++||.++..  +.++
T Consensus        79 g~--id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~--~~~~  152 (263)
T PRK06200         79 GK--LDCFVGNAGIWDY-NTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFY--PGGG  152 (263)
T ss_pred             CC--CCEEEECCCCccc-CCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcC--CCCC
Confidence            64  5699999998542 13455666654    88999999999999999999998654 58999999999887  6677


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      ...|++||+|+++|+++++.|+.+ +|+||+|+||+++|+|..
T Consensus       153 ~~~Y~~sK~a~~~~~~~la~el~~-~Irvn~i~PG~i~t~~~~  194 (263)
T PRK06200        153 GPLYTASKHAVVGLVRQLAYELAP-KIRVNGVAPGGTVTDLRG  194 (263)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhc-CcEEEEEeCCccccCCcC
Confidence            889999999999999999999987 599999999999999864

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-33  Score=234.72  Aligned_cols=190  Identities=22%  Similarity=0.298  Sum_probs=162.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh-hhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      ++++|+++||||++|||+++|++|+++|++|++.+|+. +..++..+++...  +.++..+.+|++|.  +++.++.+.+
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~   81 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA--GGEAIAVKGDVTVESDVVNLIQTAVK   81 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHH
Confidence            36699999999999999999999999999999988854 4556666666554  34677889999974  3455566666


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCc
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~  205 (255)
                      .++  ++|++|||||...+  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++ +|+||++||..+..  +.+..
T Consensus        82 ~~g--~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~--~~~~~  155 (261)
T PRK08936         82 EFG--TLDVMINNAGIENA--VPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI--PWPLF  155 (261)
T ss_pred             HcC--CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC--CCCCC
Confidence            665  46699999998654  4577889999999999999999999999999998765 68999999988877  67888


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      .+|++||+|+.+|+++++.|+.+.||+|++|+||+++|++.+
T Consensus       156 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~  197 (261)
T PRK08936        156 VHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINA  197 (261)
T ss_pred             cccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccc
Confidence            999999999999999999999999999999999999999865

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-33  Score=236.27  Aligned_cols=185  Identities=25%  Similarity=0.319  Sum_probs=157.8

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||++++++|+++|++|++++|++++..           ...+..+.+|++|.  +++.++++.+.
T Consensus         6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (260)
T PRK06523          6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDL-----------PEGVEFVAADLTTAEGCAAVARAVLER   74 (260)
T ss_pred             CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhc-----------CCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            466999999999999999999999999999999999865310           23577889999873  45566677776


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC-Cch
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP-LYS  206 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~-~~~  206 (255)
                      +++  +|++|||||.......++.+.+.++|++.+++|+.+++.+++.++|+|++++.|+||++||..+..  +.+ ...
T Consensus        75 ~~~--id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~--~~~~~~~  150 (260)
T PRK06523         75 LGG--VDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRL--PLPESTT  150 (260)
T ss_pred             cCC--CCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccC--CCCCCcc
Confidence            664  569999999754333457778999999999999999999999999999888789999999998876  434 678


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .|++||+++++|+++++.|+.++||+|++++||+++|++.+..
T Consensus       151 ~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~  193 (260)
T PRK06523        151 AYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVAL  193 (260)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHH
Confidence            9999999999999999999999999999999999999987543

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.5e-33  Score=260.96  Aligned_cols=191  Identities=23%  Similarity=0.270  Sum_probs=168.9

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      .++++++||||++|||+++|++|+++|++|++++|+.+++++..+++++.+  ..+..+.+|++|.  +++.++++.+.+
T Consensus       313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~  390 (582)
T PRK05855        313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAG--AVAHAYRVDVSDADAMEAFAEWVRAEH  390 (582)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            458999999999999999999999999999999999999888888886653  3678889999984  456666666666


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCchh
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++  +|++|||||+...  .++.+.+.+++++++++|+.|+++++++++|.|++++ +|+||++||.++..  +.++...
T Consensus       391 g~--id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~~~  464 (582)
T PRK05855        391 GV--PDIVVNNAGIGMA--GGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYA--PSRSLPA  464 (582)
T ss_pred             CC--CcEEEECCccCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc--CCCCCcH
Confidence            64  6699999999754  5578899999999999999999999999999998876 58999999999988  6788999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |++||+|+++|+++|+.|+.++||+|++|+||+++|+|.+..
T Consensus       465 Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~  506 (582)
T PRK05855        465 YATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATT  506 (582)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhcc
Confidence            999999999999999999999999999999999999987653

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-33  Score=237.12  Aligned_cols=192  Identities=21%  Similarity=0.312  Sum_probs=162.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhh-------HHHHHHHHHhhcCCceEEEEEEECCCC--cHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK-------LKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEG  120 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~  120 (255)
                      +++||+++||||++|||.++|++|+++|++|++++|+.+.       +++..+++.+.  +.++..+.+|+++.  +++.
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~   80 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA--GGQALPLVGDVRDEDQVAAA   80 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHH
Confidence            3568999999999999999999999999999999998653       44555555543  34678889999974  4556


Q ss_pred             HHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC
Q 025260          121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP  200 (255)
Q Consensus       121 ~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~  200 (255)
                      ++++.+.+++  +|++|||||....  .+..+.+.+++++++++|+.+++.++++++|.|+++++|+|+++||..+..  
T Consensus        81 ~~~~~~~~g~--id~li~~ag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~--  154 (273)
T PRK08278         81 VAKAVERFGG--IDICVNNASAINL--TGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLD--  154 (273)
T ss_pred             HHHHHHHhCC--CCEEEECCCCcCC--CCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcc--
Confidence            6677776664  6699999998654  457788999999999999999999999999999888789999999987766  


Q ss_pred             CC--CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeee-eeeeCCcchh
Q 025260          201 SD--PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLF-LLCFYNLNDL  249 (255)
Q Consensus       201 ~~--~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg-~v~T~~~~~~  249 (255)
                      +.  ++...|++||+|+++|+++++.|+.++||+||+|+|| ++.|++.+.+
T Consensus       155 ~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~  206 (273)
T PRK08278        155 PKWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNL  206 (273)
T ss_pred             ccccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhc
Confidence            44  7788999999999999999999999999999999999 6899866543

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.1e-33  Score=259.06  Aligned_cols=187  Identities=26%  Similarity=0.348  Sum_probs=162.9

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      ..||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.+...+.+|++|.  +++.++++.+.+
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~  341 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL-----GDEHLSVQADITDEAAVESAFAQIQARW  341 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEccCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999988887766554     23466789999874  566777777777


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++  +|+||||||.... ..++.+.+.++|++++++|+.+++++++.++|+|  ++.|+||++||.++..  +.++...|
T Consensus       342 g~--id~li~nAg~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~--~~~~~~~Y  414 (520)
T PRK06484        342 GR--LDVLVNNAGIAEV-FKPSLEQSAEDFTRVYDVNLSGAFACARAAARLM--SQGGVIVNLGSIASLL--ALPPRNAY  414 (520)
T ss_pred             CC--CCEEEECCCCcCC-CCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh--ccCCEEEEECchhhcC--CCCCCchh
Confidence            74  5699999998632 2457788999999999999999999999999999  4568999999999988  77889999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ++||+|+++|+++|+.|+.++||+||+|+||+++|+|.+..
T Consensus       415 ~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~  455 (520)
T PRK06484        415 CASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLAL  455 (520)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhh
Confidence            99999999999999999999999999999999999987643

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-33  Score=235.49  Aligned_cols=188  Identities=24%  Similarity=0.286  Sum_probs=160.5

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~  130 (255)
                      +++++||||++|||.+++++|+++|++|++++|+.+++++..+++...  . ++..+.+|++|.  +++.++++.+.++.
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   78 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA--A-RVSVYAADVRDADALAAAAADFIAAHGL   78 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC--C-eeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            578999999999999999999999999999999988877766655432  2 688899999973  45555666665554


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchH
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA  210 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~a  210 (255)
                        +|++|||||.... .....+.+.+++++++++|+.|++.+++.++|.|++++.|+||++||..+..  +.+....|++
T Consensus        79 --id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~--~~~~~~~Y~a  153 (257)
T PRK07024         79 --PDVVIANAGISVG-TLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVR--GLPGAGAYSA  153 (257)
T ss_pred             --CCEEEECCCcCCC-ccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcC--CCCCCcchHH
Confidence              5699999998643 1223347889999999999999999999999999888889999999999887  6788899999


Q ss_pred             HHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          211 TKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       211 sK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ||++++.|+++++.|++++||+|++++||++.|++...
T Consensus       154 sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~  191 (257)
T PRK07024        154 SKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAH  191 (257)
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhc
Confidence            99999999999999999999999999999999997643

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-33  Score=232.87  Aligned_cols=184  Identities=27%  Similarity=0.319  Sum_probs=158.8

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~  130 (255)
                      ||+++||||++|||++++++|+++|++|++++|+.+++++..+++.+.  +.++..+.+|++|+  +++.++++.+.+++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF--PGQVLTVQMDVRNPEDVQKMVEQIDEKFGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999999999998888877777654  24678899999873  45666667666664


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCchhch
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYA  209 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~Y~  209 (255)
                        +|++|||||....  .++.+.+.++|++++++|+.++++++++++|.|.+++ +|+||++||..+..  +.+...+|+
T Consensus        79 --id~lI~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~--~~~~~~~Y~  152 (252)
T PRK07677         79 --IDALINNAAGNFI--CPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWD--AGPGVIHSA  152 (252)
T ss_pred             --ccEEEECCCCCCC--CCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhcc--CCCCCcchH
Confidence              5699999997533  4577889999999999999999999999999987653 68999999998877  567788999


Q ss_pred             HHHHHHHHHHHHHHHHHcc-CCceEEEeeeeeeeeC
Q 025260          210 ATKAYIDQFSRSLYVEYRK-SGIDVQCQVLFLLCFY  244 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~-~gi~v~~v~Pg~v~T~  244 (255)
                      +||+|+.+|+++|+.|+.+ +||+|++|+||+++|+
T Consensus       153 ~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~  188 (252)
T PRK07677        153 AAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERT  188 (252)
T ss_pred             HHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccc
Confidence            9999999999999999974 6999999999999964

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-33  Score=234.17  Aligned_cols=191  Identities=18%  Similarity=0.082  Sum_probs=158.2

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcC-CcEEEEeCChhh-HHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDK-LKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G-~~V~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      -++|+++||||++|||+++|++|+++| ++|++++|+++. +++..+++++.+ ..++..+++|++|.  +++.++++.+
T Consensus         6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~   84 (253)
T PRK07904          6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAG-ASSVEVIDFDALDTDSHPKVIDAAFA   84 (253)
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcC-CCceEEEEecCCChHHHHHHHHHHHh
Confidence            357899999999999999999999995 899999999886 888888887653 34688899999874  2344454443


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                       .+  ++|++|||+|...+..  -...+.++.++++++|+.+++.+++.++|.|++++.|+||++||..+..  +.++..
T Consensus        85 -~g--~id~li~~ag~~~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~--~~~~~~  157 (253)
T PRK07904         85 -GG--DVDVAIVAFGLLGDAE--ELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGER--VRRSNF  157 (253)
T ss_pred             -cC--CCCEEEEeeecCCchh--hcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcC--CCCCCc
Confidence             23  6779999999864321  1122445566889999999999999999999988889999999998866  567778


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .|++||+|+.+|+++|+.|+.++||+|++++||+++|++..+.
T Consensus       158 ~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~  200 (253)
T PRK07904        158 VYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA  200 (253)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccC
Confidence            8999999999999999999999999999999999999988754

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3e-33  Score=230.52  Aligned_cols=192  Identities=21%  Similarity=0.301  Sum_probs=170.5

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcCC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGL  131 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~  131 (255)
                      ++++|||||+|||+++|.++.++|++|.++.|+.++++++.++++-.....++.+..+|+.|-  +...++++++..+  
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~--  111 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEG--  111 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccC--
Confidence            889999999999999999999999999999999999999999998765555588888998652  2333344433223  


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCchhchH
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAA  210 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~Y~a  210 (255)
                      ++|.+|||||...+  +.+++.+.++++..|++|++|+++++++.+|.|+++. .|+|+.+||.++..  +..++++|++
T Consensus       112 ~~d~l~~cAG~~v~--g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~--~i~GysaYs~  187 (331)
T KOG1210|consen  112 PIDNLFCCAGVAVP--GLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAML--GIYGYSAYSP  187 (331)
T ss_pred             CcceEEEecCcccc--cccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhc--Cccccccccc
Confidence            67799999999866  7799999999999999999999999999999998876 68999999999999  8899999999


Q ss_pred             HHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhhh
Q 025260          211 TKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLVM  251 (255)
Q Consensus       211 sK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~  251 (255)
                      ||+|+.+++++|++|+.++||+|..+.|+.+.||.+++...
T Consensus       188 sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~  228 (331)
T KOG1210|consen  188 SKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENK  228 (331)
T ss_pred             HHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccc
Confidence            99999999999999999999999999999999999887653

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.5e-34  Score=224.14  Aligned_cols=184  Identities=25%  Similarity=0.311  Sum_probs=157.9

Q ss_pred             CCcEEEEECCC-CchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           52 YGSWALVTGPT-DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        52 ~gk~vlITGas-~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      ..|.|+||||| ||||.++|++|++.||.|+.++|..+...+...+       ..+..+.+|++++  +.++..++++. 
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~-------~gl~~~kLDV~~~~~V~~v~~evr~~-   77 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ-------FGLKPYKLDVSKPEEVVTVSGEVRAN-   77 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh-------hCCeeEEeccCChHHHHHHHHHHhhC-
Confidence            35889999988 7999999999999999999999998776654432       2478889999875  33444444442 


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      +...+|+|+||||....  .|..|.+.++.+++|++|++|+.+++|++. +++.+.+|.||+++|..+..  |.|..+.|
T Consensus        78 ~~Gkld~L~NNAG~~C~--~Pa~d~~i~ave~~f~vNvfG~irM~~a~~-h~likaKGtIVnvgSl~~~v--pfpf~~iY  152 (289)
T KOG1209|consen   78 PDGKLDLLYNNAGQSCT--FPALDATIAAVEQCFKVNVFGHIRMCRALS-HFLIKAKGTIVNVGSLAGVV--PFPFGSIY  152 (289)
T ss_pred             CCCceEEEEcCCCCCcc--cccccCCHHHHHhhhccceeeeehHHHHHH-HHHHHccceEEEecceeEEe--ccchhhhh
Confidence            33368899999998754  568899999999999999999999999999 56667789999999999998  88999999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++||+|+.++++.|+-|++++||+|..+.||.|.|++.+.
T Consensus       153 sAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  153 SASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             hHHHHHHHHhhhhcEEeeeccccEEEEecccceecccccC
Confidence            9999999999999999999999999999999999998876

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=5.3e-33  Score=232.35  Aligned_cols=190  Identities=23%  Similarity=0.296  Sum_probs=160.8

Q ss_pred             cccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHH
Q 025260           47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI  124 (255)
Q Consensus        47 ~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~  124 (255)
                      .+..++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++     +..+.++.+|+++.  +++.++++
T Consensus         4 ~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~   78 (255)
T PRK05717          4 PNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL-----GENAWFIAMDVADEAQVAAGVAEV   78 (255)
T ss_pred             CCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHH
Confidence            355677999999999999999999999999999999999887666554433     33577889999974  45566777


Q ss_pred             HHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                      .+.+++  +|++|||||...+...++.+.+.++|++.+++|+.+++.+++++.|+|.++ .|+||++||..+..  +.+.
T Consensus        79 ~~~~g~--id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~~~--~~~~  153 (255)
T PRK05717         79 LGQFGR--LDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRARQ--SEPD  153 (255)
T ss_pred             HHHhCC--CCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhhcC--CCCC
Confidence            776664  669999999875433467788999999999999999999999999998654 58999999998887  6678


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      ..+|++||+|+++++++++.|+.. +++|++++||+++|++.+
T Consensus       154 ~~~Y~~sKaa~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~  195 (255)
T PRK05717        154 TEAYAASKGGLLALTHALAISLGP-EIRVNAVSPGWIDARDPS  195 (255)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhcC-CCEEEEEecccCcCCccc
Confidence            899999999999999999999976 599999999999998754

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-33  Score=229.58  Aligned_cols=194  Identities=18%  Similarity=0.241  Sum_probs=164.2

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC----cHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD----LDEGVERIKE  126 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~~~~  126 (255)
                      +++|+++||||++|||++++++|+++|++|++++|+++++++..+++.+.. ......+.+|+++.    ..+..+++.+
T Consensus         4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~i~~   82 (239)
T PRK08703          4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAG-HPEPFAIRFDLMSAEEKEFEQFAATIAE   82 (239)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcC-CCCcceEEeeecccchHHHHHHHHHHHH
Confidence            458999999999999999999999999999999999998888887776543 33466778888652    3445566666


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .+++ ++|++|||||.... ..++.+.+.+++++.+++|+.+++.+++.++|.|.+.+.++++++||..+..  +.++..
T Consensus        83 ~~~~-~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~--~~~~~~  158 (239)
T PRK08703         83 ATQG-KLDGIVHCAGYFYA-LSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGET--PKAYWG  158 (239)
T ss_pred             HhCC-CCCEEEEecccccc-CCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecccccc--CCCCcc
Confidence            6522 57799999997543 2457888999999999999999999999999999877789999999988877  667788


Q ss_pred             hchHHHHHHHHHHHHHHHHHccC-CceEEEeeeeeeeeCCcchh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKS-GIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~-gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .|++||+|+++|+++++.|+.++ +|+|++|+||+++||+..+.
T Consensus       159 ~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~  202 (239)
T PRK08703        159 GFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKS  202 (239)
T ss_pred             chHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccccc
Confidence            99999999999999999999877 69999999999999986543

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.1e-33  Score=235.34  Aligned_cols=182  Identities=30%  Similarity=0.362  Sum_probs=157.2

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhc
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE  129 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~  129 (255)
                      ++|+++||||++|||++++++|+++|++|++++|+.+++++..+        ..+..+.+|++|.  +++.++++.+.++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~--------~~~~~~~~Dv~~~~~~~~~~~~~~~~~~   73 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS--------LGVHPLSLDVTDEASIKAAVDTIIAEEG   73 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh--------CCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            47899999999999999999999999999999999877654321        1356788999873  4555666666555


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhch
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA  209 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~  209 (255)
                        ++|++|||||....  +++.+.+.+++++.+++|+.+++.+++.++|.|++++.|+||++||..+..  +.+....|+
T Consensus        74 --~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~--~~~~~~~Y~  147 (273)
T PRK06182         74 --RIDVLVNNAGYGSY--GAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKI--YTPLGAWYH  147 (273)
T ss_pred             --CCCEEEECCCcCCC--CchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcC--CCCCccHhH
Confidence              46699999998743  567888999999999999999999999999999888889999999988776  567778899


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      +||+|+++|+++++.|+.+.||+|++++||+++|++.+
T Consensus       148 ~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~  185 (273)
T PRK06182        148 ATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGD  185 (273)
T ss_pred             HHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccch
Confidence            99999999999999999999999999999999999864

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-33  Score=234.00  Aligned_cols=188  Identities=25%  Similarity=0.337  Sum_probs=165.2

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcCC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGL  131 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~  131 (255)
                      |+++||||+||||++++++|+++|++|++++|+.+++++..+++...  +.++..+.+|+++.  +++.++.+.+.++  
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~~--   76 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA--GGDGFYQRCDVRDYSQLTALAQACEEKWG--   76 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcC--
Confidence            47999999999999999999999999999999999888888887664  34577889999873  3455566666555  


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHH
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAAT  211 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~as  211 (255)
                      ++|++|||||....  ..+.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..  +.++...|++|
T Consensus        77 ~id~lI~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~--~~~~~~~Y~~s  152 (270)
T PRK05650         77 GIDVIVNNAGVASG--GFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLM--QGPAMSSYNVA  152 (270)
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcC--CCCCchHHHHH
Confidence            46699999998754  457888999999999999999999999999999888789999999999888  67889999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          212 KAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       212 K~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |+|+++|+++|+.|+.+.||++++++||+++|++.+.+
T Consensus       153 Kaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~  190 (270)
T PRK05650        153 KAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSF  190 (270)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEecCccccCccccc
Confidence            99999999999999999999999999999999987654

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.1e-33  Score=256.14  Aligned_cols=189  Identities=28%  Similarity=0.435  Sum_probs=164.5

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      .+||+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.+...+.+|+++.  +++.++.+.+.+
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-----GPDHHALAMDVSDEAQIREGFEQLHREF   77 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEeccCCHHHHHHHHHHHHHHh
Confidence            45899999999999999999999999999999999988887766655     23567789999874  466777777777


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCc-EEEEECCccccccCCCCCchh
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKG-AIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g-~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++  +|+||||||+..+...++.+.+.++|++++++|+.+++.++++++|+|++++.| +||++||..+..  +.+....
T Consensus        78 g~--iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~--~~~~~~~  153 (520)
T PRK06484         78 GR--IDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLV--ALPKRTA  153 (520)
T ss_pred             CC--CCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCC--CCCCCch
Confidence            74  569999999853323457788999999999999999999999999999877665 999999999988  6788899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      |+++|+|+.+|+++|+.|+.+.||+|++++||+++|++.++
T Consensus       154 Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~  194 (520)
T PRK06484        154 YSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAE  194 (520)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhh
Confidence            99999999999999999999999999999999999999764

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.6e-33  Score=237.86  Aligned_cols=192  Identities=24%  Similarity=0.267  Sum_probs=162.0

Q ss_pred             cccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh-hhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHH
Q 025260           47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVER  123 (255)
Q Consensus        47 ~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~  123 (255)
                      ...+++||+++||||++|||+++|++|+++|++|++.+++. +..++..+++++.  +.++..+.+|++|.  +++.++.
T Consensus         6 ~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dv~d~~~~~~~~~~   83 (306)
T PRK07792          6 NTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA--GAKAVAVAGDISQRATADELVAT   83 (306)
T ss_pred             CCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHH
Confidence            34567899999999999999999999999999999999753 4566777777654  34678899999973  4555666


Q ss_pred             HHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-------CcEEEEECCccc
Q 025260          124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-------KGAIVNIGSGAA  196 (255)
Q Consensus       124 ~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-------~g~iv~vsS~~~  196 (255)
                      +.+ ++  ++|++|||||+...  ..+.+.+.++|++.+++|+.+++.+++++.|+|+++.       .|+||++||.++
T Consensus        84 ~~~-~g--~iD~li~nAG~~~~--~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  158 (306)
T PRK07792         84 AVG-LG--GLDIVVNNAGITRD--RMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAG  158 (306)
T ss_pred             HHH-hC--CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccc
Confidence            666 66  46699999998754  4577889999999999999999999999999997541       379999999988


Q ss_pred             cccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          197 IVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       197 ~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ..  +.++...|++||+|+++|+++++.|+.++||+||+|+|| +.|+|.+.
T Consensus       159 ~~--~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg-~~t~~~~~  207 (306)
T PRK07792        159 LV--GPVGQANYGAAKAGITALTLSAARALGRYGVRANAICPR-ARTAMTAD  207 (306)
T ss_pred             cc--CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC-CCCchhhh
Confidence            87  567788999999999999999999999999999999999 48888654

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-32  Score=230.52  Aligned_cols=193  Identities=23%  Similarity=0.327  Sum_probs=169.0

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK  125 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~  125 (255)
                      .+.++||+++||||++|||++++++|+++|++|++++|+++.+++..+++++.  +.++..+.+|+++.  +.+.++++.
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA--GGAAEALAFDIADEEAVAAAFARID   83 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHH
Confidence            44577999999999999999999999999999999999998888888877654  33577889999874  455666777


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCc
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~  205 (255)
                      +.+++  +|++|||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.|++|++||..+..  +.++.
T Consensus        84 ~~~~~--id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~--~~~~~  157 (256)
T PRK06124         84 AEHGR--LDILVNNVGARDR--RPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQV--ARAGD  157 (256)
T ss_pred             HhcCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhcc--CCCCc
Confidence            76664  5699999998643  567788999999999999999999999999999888889999999998887  67888


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ..|++||+|+.++++.++.|+.+.||+|++|+||++.|++.+.
T Consensus       158 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~  200 (256)
T PRK06124        158 AVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAA  200 (256)
T ss_pred             cHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhh
Confidence            9999999999999999999999999999999999999998543

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-33  Score=231.91  Aligned_cols=188  Identities=24%  Similarity=0.304  Sum_probs=162.7

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      +++|+++||||++|||+++|++|+++|++|++++|+.+..++..+++     ...+..+.+|++|.  +++.++++.+.+
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-----GPAAIAVSLDVTRQDSIDRIVAAAVERF   78 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            56899999999999999999999999999999999998877766554     23477889999874  456667777766


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCchh
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +  ++|++|||||....  .++.+.+.+++++.+++|+.+++.++++++|.|.+++ +|+||++||..+..  +.++...
T Consensus        79 ~--~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~  152 (257)
T PRK07067         79 G--GIDILFNNAALFDM--APILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRR--GEALVSH  152 (257)
T ss_pred             C--CCCEEEECCCcCCC--CCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCC--CCCCCch
Confidence            6  46699999998643  4577889999999999999999999999999997764 58999999988877  6678899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |++||+++++++++++.|+.++||+|++++||++.|++++..
T Consensus       153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~  194 (257)
T PRK07067        153 YCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQV  194 (257)
T ss_pred             hhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhh
Confidence            999999999999999999999999999999999999987643

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-33  Score=239.48  Aligned_cols=194  Identities=22%  Similarity=0.224  Sum_probs=161.0

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+..++..+..+.+|++|.  ++++++++.+.
T Consensus        13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   92 (306)
T PRK06197         13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA   92 (306)
T ss_pred             cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence            4679999999999999999999999999999999999998888888877654455678889999974  45566666666


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc--------
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI--------  199 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~--------  199 (255)
                      ++  ++|++|||||+..+    ..+.+.++++..+++|+.|++.+++.++|.|++++.++||++||.++...        
T Consensus        93 ~~--~iD~li~nAg~~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~  166 (306)
T PRK06197         93 YP--RIDLLINNAGVMYT----PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDL  166 (306)
T ss_pred             CC--CCCEEEECCccccC----CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCcccc
Confidence            66  46699999998643    23466778899999999999999999999998877789999999875431        


Q ss_pred             ---CCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEe--eeeeeeeCCcchh
Q 025260          200 ---PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQ--VLFLLCFYNLNDL  249 (255)
Q Consensus       200 ---~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v--~Pg~v~T~~~~~~  249 (255)
                         .+.++..+|++||+|+++|++.+++|+.+.|++|+++  +||+|+|++.+++
T Consensus       167 ~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~  221 (306)
T PRK06197        167 QWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNL  221 (306)
T ss_pred             CcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccC
Confidence               0224467899999999999999999998888777665  7999999998754

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=1e-32  Score=234.38  Aligned_cols=191  Identities=23%  Similarity=0.306  Sum_probs=164.8

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      +++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...  +.++..+.+|++|.  +++.++.+.+.+
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~~   81 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ--GAEVLGVRTDVSDAAQVEALADAALERF   81 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999999999999999988888887777654  34678899999873  455666666666


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCC------cEEEEECCccccccCCC
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK------GAIVNIGSGAAIVIPSD  202 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~------g~iv~vsS~~~~~~~~~  202 (255)
                      ++  +|++|||||....  .++.+.+.++|++.+++|+.|+++++++++|.|+++..      |+||++||.++..  +.
T Consensus        82 g~--id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~  155 (287)
T PRK06194         82 GA--VHLLFNNAGVGAG--GLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL--AP  155 (287)
T ss_pred             CC--CCEEEECCCCCCC--CCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc--CC
Confidence            64  5699999999754  55778899999999999999999999999999987754      7999999999887  66


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHcc--CCceEEEeeeeeeeeCCcchh
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRK--SGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~--~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ++...|++||+++++|+++++.|+..  .+|+++.++||++.|++.+..
T Consensus       156 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~  204 (287)
T PRK06194        156 PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSE  204 (287)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcccccc
Confidence            78889999999999999999999874  569999999999999987654

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.8e-32  Score=227.76  Aligned_cols=189  Identities=24%  Similarity=0.278  Sum_probs=161.6

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEE-eCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      ++|+++||||++|||+++|++|+++|++|++. +++....++..+++.+.  +.++..+.+|++|.  +++.++++.+.+
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL--GFDFIASEGNVGDWDSTKAAFDKVKAEV   79 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            58999999999999999999999999998885 45555555556665543  44577888999873  456667777777


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++  +|++|||||....  .++.+.+.++|++++++|+.+++.++++++|.|++++.|+||++||..+..  +.++...|
T Consensus        80 ~~--id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~~y  153 (246)
T PRK12938         80 GE--IDVLVNNAGITRD--VVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK--GQFGQTNY  153 (246)
T ss_pred             CC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccC--CCCCChhH
Confidence            64  5699999998643  457788999999999999999999999999999888789999999998877  66788999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      +++|+|+++|++++++|+.+.||++++++||++.||+.+.
T Consensus       154 ~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~  193 (246)
T PRK12938        154 STAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA  193 (246)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhh
Confidence            9999999999999999999999999999999999998764

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-32  Score=228.72  Aligned_cols=189  Identities=25%  Similarity=0.334  Sum_probs=160.8

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      ++++||+++||||++|||.++|++|+++|++|++++|+.+.. +..+++.    ...+..+.+|+++.  +++.++++.+
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~   85 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLL----GGNAKGLVCDVSDSQSVEAAVAAVIS   85 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhh----CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            356799999999999999999999999999999999987642 2223322    34566889999874  4556666666


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .++  ++|++|||||....  .++.+.+.+++++.+++|+.+++++++.+.|.|++++.|+||++||..+..  +.+...
T Consensus        86 ~~~--~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~  159 (255)
T PRK06841         86 AFG--RIDILVNSAGVALL--APAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVV--ALERHV  159 (255)
T ss_pred             HhC--CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhcc--CCCCCc
Confidence            665  46699999998743  456788899999999999999999999999999888889999999998877  678889


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      .|++||+|+++++++++.|+.++||+|++|+||+++|++.++
T Consensus       160 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~  201 (255)
T PRK06841        160 AYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKK  201 (255)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCccccc
Confidence            999999999999999999999999999999999999998654

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-32  Score=227.24  Aligned_cols=191  Identities=21%  Similarity=0.255  Sum_probs=166.8

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~  130 (255)
                      +|+++||||++|||++++++|+++|++|++.+|+.+++++..+++.+..++.++..+.+|+++.  +++.++++.+.+++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999999998888888877766667889999999974  35566666666664


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC-chhch
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL-YSVYA  209 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~-~~~Y~  209 (255)
                        +|++|||||+...  .++.+.+.+.+++.+++|+.+++.+++.++|.|++++.++||++||..+..  +.+. ...|+
T Consensus        82 --id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~~Y~  155 (248)
T PRK08251         82 --LDRVIVNAGIGKG--ARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVR--GLPGVKAAYA  155 (248)
T ss_pred             --CCEEEECCCcCCC--CCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEecccccc--CCCCCcccHH
Confidence              5699999998754  446677888899999999999999999999999888889999999988877  4554 67899


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      +||++++++++.++.|+...|+++++++||+++|++.+..
T Consensus       156 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~  195 (248)
T PRK08251        156 ASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKA  195 (248)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcc
Confidence            9999999999999999998899999999999999987653

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-32  Score=232.38  Aligned_cols=182  Identities=29%  Similarity=0.386  Sum_probs=159.0

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhc
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE  129 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~  129 (255)
                      ++++++||||+||||++++++|+++|++|++.+|+.++.+.          ...+..+.+|++|.  +++.++.+.+.++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   72 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP----------IPGVELLELDVTDDASVQAAVDEVIARAG   72 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------cCCCeeEEeecCCHHHHHHHHHHHHHhCC
Confidence            36899999999999999999999999999999999765432          23467789999874  4666677777666


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhch
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA  209 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~  209 (255)
                      +  +|++|||||....  .++.+.+.+++++++++|+.|++.+++.++|.|++++.|+||++||..+..  +.|....|+
T Consensus        73 ~--~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~~Y~  146 (270)
T PRK06179         73 R--IDVLVNNAGVGLA--GAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFL--PAPYMALYA  146 (270)
T ss_pred             C--CCEEEECCCCCCC--cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccC--CCCCccHHH
Confidence            4  5699999998754  557788999999999999999999999999999988889999999999887  678889999


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      +||+++++|+++++.|+++.||++++++||++.|++.++.
T Consensus       147 ~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~  186 (270)
T PRK06179        147 ASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANA  186 (270)
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCccccccccc
Confidence            9999999999999999999999999999999999987643

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-32  Score=228.29  Aligned_cols=189  Identities=22%  Similarity=0.257  Sum_probs=163.6

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~  130 (255)
                      +|+++||||+++||.+++++|+++|++|++++|+...+++..+++.+..+..++..+.+|+++.  ++..++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999999988888877776655445688999999973  45566667666664


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCchhch
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYA  209 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~Y~  209 (255)
                        +|++|||||....  .++.+.+.++|++.+++|+.+++++++.++|.|++++ +|++|++||..+..  +.+...+|+
T Consensus        82 --id~vv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~--~~~~~~~Y~  155 (259)
T PRK12384         82 --VDLLVYNAGIAKA--AFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKV--GSKHNSGYS  155 (259)
T ss_pred             --CCEEEECCCcCCC--CCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCccccc--CCCCCchhH
Confidence              5699999998754  5678889999999999999999999999999998776 68999999988776  567788999


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceEEEeeeeee-eeCCcc
Q 025260          210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLL-CFYNLN  247 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v-~T~~~~  247 (255)
                      +||+|+++++++++.|+.++||+|++++||.+ .|++..
T Consensus       156 ~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~  194 (259)
T PRK12384        156 AAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQ  194 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhh
Confidence            99999999999999999999999999999974 777654

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=2.6e-32  Score=228.40  Aligned_cols=188  Identities=22%  Similarity=0.296  Sum_probs=161.7

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEe-CChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhc
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE  129 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~  129 (255)
                      +|+++||||++|||+++|++|+++|++|+++. |+.+..++..++++..  +.++..+.+|+++.  +++.++++.+.++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH--GVRAEIRQLDLSDLPEGAQALDKLIQRLG   79 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            68999999999999999999999999998886 4566667766776654  34678889999873  4666777777777


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCchhc
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      +  +|++|||||....  ..+.+.+.+++++.+++|+.+++.+++++.|.|.+++ +|+||++||..+..  +.++...|
T Consensus        80 ~--id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~--~~~~~~~Y  153 (256)
T PRK12743         80 R--IDVLVNNAGAMTK--APFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHT--PLPGASAY  153 (256)
T ss_pred             C--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccC--CCCCcchh
Confidence            4  5699999998654  4567889999999999999999999999999997654 58999999998877  67788999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      +++|+++.+++++++.|+.++||+|++|+||+++|++...
T Consensus       154 ~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~  193 (256)
T PRK12743        154 TAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGM  193 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccc
Confidence            9999999999999999999999999999999999998653

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=8.5e-34  Score=214.63  Aligned_cols=188  Identities=30%  Similarity=0.346  Sum_probs=162.8

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      ++.|+++++||+.-|||++++++|++.|++|+.++|++..+....++.     ...+..+..|+++.  ++..+...  +
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~-----p~~I~Pi~~Dls~w--ea~~~~l~--~   74 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET-----PSLIIPIVGDLSAW--EALFKLLV--P   74 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC-----CcceeeeEecccHH--HHHHHhhc--c
Confidence            467999999999999999999999999999999999999988877664     44588999999874  33333332  3


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECCccccccCCCCCchhc
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ...+|.+|||||+...  .++.+++.+++++.+++|+.+++.+.|.....+..+ .+|.||++||.++..  +....+.|
T Consensus        75 v~pidgLVNNAgvA~~--~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R--~~~nHtvY  150 (245)
T KOG1207|consen   75 VFPIDGLVNNAGVATN--HPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIR--PLDNHTVY  150 (245)
T ss_pred             cCchhhhhccchhhhc--chHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhccc--ccCCceEE
Confidence            3368899999999865  679999999999999999999999999966666544 478999999999988  77889999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      +++|+|+++++++|+.|+.+++||||+|.|-.+-|+|-+.-+
T Consensus       151 catKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnW  192 (245)
T KOG1207|consen  151 CATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNW  192 (245)
T ss_pred             eecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEeccccccc
Confidence            999999999999999999999999999999999999976544

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-32  Score=230.63  Aligned_cols=185  Identities=25%  Similarity=0.278  Sum_probs=159.3

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhc
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE  129 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~  129 (255)
                      .+|+++||||+||||++++++|+++|++|++++|+.+++++..+.    . ..++..+.+|++|.  +.+.++.+.+.++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~----~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   77 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL----H-PDRALARLLDVTDFDAIDAVVADAEATFG   77 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh----c-CCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence            368999999999999999999999999999999998776544332    1 33577889999874  4555666666666


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhch
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA  209 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~  209 (255)
                      +  +|++|||||....  .+..+.+.+++++++++|+.|++.++++++|+|++++.|+||++||.++..  +.++...|+
T Consensus        78 ~--~d~vv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~--~~~~~~~Y~  151 (277)
T PRK06180         78 P--IDVLVNNAGYGHE--GAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLI--TMPGIGYYC  151 (277)
T ss_pred             C--CCEEEECCCccCC--cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccC--CCCCcchhH
Confidence            4  5699999998643  557788999999999999999999999999999888889999999999887  678899999


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      +||+++++++++++.|+.+.|++|++++||++.|++.+
T Consensus       152 ~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~  189 (277)
T PRK06180        152 GSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAG  189 (277)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccc
Confidence            99999999999999999999999999999999998754

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-32  Score=229.43  Aligned_cols=189  Identities=26%  Similarity=0.334  Sum_probs=161.7

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcCC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGL  131 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~  131 (255)
                      |+++||||++|||++++++|+++|++|++++|+++.+++..+++...+ ......+.+|+++.  +++.++++.+.++  
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--   77 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALG-GTVPEHRALDISDYDAVAAFAADIHAAHG--   77 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCcceEEEeeCCCHHHHHHHHHHHHHhcC--
Confidence            579999999999999999999999999999999988888887776543 33355678999873  3555666666665  


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCchhchH
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAA  210 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~Y~a  210 (255)
                      ++|++|||||....  ..+.+.+.+++++.+++|+.+++.++++++|.|.+++ .|+||++||..+..  +.+....|++
T Consensus        78 ~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~--~~~~~~~Y~~  153 (272)
T PRK07832         78 SMDVVMNIAGISAW--GTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLV--ALPWHAAYSA  153 (272)
T ss_pred             CCCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccC--CCCCCcchHH
Confidence            46699999998643  4577899999999999999999999999999997653 68999999998876  6678889999


Q ss_pred             HHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          211 TKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       211 sK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ||+|+.+|+++++.|+.++||+|++++||+++|++.++.
T Consensus       154 sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~  192 (272)
T PRK07832        154 SKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTV  192 (272)
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcc
Confidence            999999999999999999999999999999999987653

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=1.6e-32  Score=236.51  Aligned_cols=188  Identities=18%  Similarity=0.178  Sum_probs=155.8

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++.      .+..+.+|++|.  ++++++++.+.
T Consensus        23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~------~v~~~~~Dl~d~~~v~~~~~~~~~~   96 (315)
T PRK06196         23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID------GVEVVMLDLADLESVRAFAERFLDS   96 (315)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh------hCeEEEccCCCHHHHHHHHHHHHhc
Confidence            4579999999999999999999999999999999999988877766653      256788999873  45555666555


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc--------
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI--------  199 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~--------  199 (255)
                      ++  ++|++|||||+...    ..+.+.++|+..+++|+.+++.+++.++|.|.+++.++||++||..+...        
T Consensus        97 ~~--~iD~li~nAg~~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~  170 (315)
T PRK06196         97 GR--RIDILINNAGVMAC----PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPH  170 (315)
T ss_pred             CC--CCCEEEECCCCCCC----CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccC
Confidence            45  46699999998642    23456778999999999999999999999998877789999999765321        


Q ss_pred             --CCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          200 --PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       200 --~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                        .+.+....|++||+|+..|++.++.++.++||+|++|+||++.|++.+..
T Consensus       171 ~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~  222 (315)
T PRK06196        171 FTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHL  222 (315)
T ss_pred             ccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccC
Confidence              02344678999999999999999999999999999999999999987543

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.2e-32  Score=226.72  Aligned_cols=189  Identities=24%  Similarity=0.286  Sum_probs=163.7

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEE-EeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      .+++++||||++|||++++++|+++|++|++ .+|+.++.++..+++++.  +.++..+.+|++|.  +++.++++.+.+
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL--GRKALAVKANVGDVEKIKEMFAQIDEEF   80 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4799999999999999999999999999876 578888888777777654  34678889999874  355666666666


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      +  ++|++|||||....  .++.+.+.+++++.+++|+.+++.++++++|.|++++.|+||++||..+..  +.+....|
T Consensus        81 ~--~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~~~y  154 (250)
T PRK08063         81 G--RLDVFVNNAASGVL--RPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIR--YLENYTTV  154 (250)
T ss_pred             C--CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcc--CCCCccHH
Confidence            6  46699999998644  557788999999999999999999999999999888889999999988776  56778899


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++||+++++|+++++.|+.+.||++++++||++.|++...
T Consensus       155 ~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~  194 (250)
T PRK08063        155 GVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKH  194 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhh
Confidence            9999999999999999999999999999999999998654

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=5.2e-33  Score=230.63  Aligned_cols=182  Identities=30%  Similarity=0.410  Sum_probs=160.6

Q ss_pred             CCC--CchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHh-cCCCcc
Q 025260           60 GPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAI-EGLDVG  134 (255)
Q Consensus        60 Gas--~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~-~~~~id  134 (255)
                      |++  +|||+++|++|+++|++|++++|+.+++++..+++.+.++. .  .+.+|+++  ++++.++++.+.+ ++  +|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~-~--~~~~D~~~~~~v~~~~~~~~~~~~g~--iD   75 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGA-E--VIQCDLSDEESVEALFDEAVERFGGR--ID   75 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTS-E--EEESCTTSHHHHHHHHHHHHHHHCSS--ES
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCC-c--eEeecCcchHHHHHHHHHHHhhcCCC--eE
Confidence            666  99999999999999999999999999988888888877653 3  49999987  4577888888888 64  56


Q ss_pred             EEEEecCCCCC--cccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHHH
Q 025260          135 VLINNVGISYP--YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATK  212 (255)
Q Consensus       135 ~lv~nag~~~~--~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~asK  212 (255)
                      ++|||+|...+  ...++.+.+.++|++.+++|+.+++.++|++.|+|.++  |+||++||..+..  +.+++..|+++|
T Consensus        76 ~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~--~~~~~~~y~~sK  151 (241)
T PF13561_consen   76 ILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQR--PMPGYSAYSASK  151 (241)
T ss_dssp             EEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTS--BSTTTHHHHHHH
T ss_pred             EEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhcc--cCccchhhHHHH
Confidence            99999998764  23668889999999999999999999999999977654  8999999998877  678889999999


Q ss_pred             HHHHHHHHHHHHHHcc-CCceEEEeeeeeeeeCCcchhh
Q 025260          213 AYIDQFSRSLYVEYRK-SGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       213 ~al~~~~~~l~~e~~~-~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      +|+++|+++|+.|+.+ +|||||+|+||+++|++.+...
T Consensus       152 aal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~  190 (241)
T PF13561_consen  152 AALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIP  190 (241)
T ss_dssp             HHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccccCeeeeeecccceeccchhccc
Confidence            9999999999999999 9999999999999999877654

...

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-32  Score=227.41  Aligned_cols=183  Identities=28%  Similarity=0.304  Sum_probs=156.7

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      ++++||+++||||++|||++++++|+++|++|++++|+.++        ..  ....+..+.+|+++.  +++.++.+.+
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~   71 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TV--DGRPAEFHAADVRDPDQVAALVDAIVE   71 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hh--cCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            34679999999999999999999999999999999998754        01  134577889999873  4666677777


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECCccccccCCCCCc
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS~~~~~~~~~~~~  205 (255)
                      .+++  +|++|||||....  .++.+.+.++|++.+++|+.+++.+++.+.|.|.++ +.|+||++||..+..  +.+..
T Consensus        72 ~~~~--id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~--~~~~~  145 (252)
T PRK07856         72 RHGR--LDVLVNNAGGSPY--ALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRR--PSPGT  145 (252)
T ss_pred             HcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCC--CCCCC
Confidence            6664  5699999998643  456788999999999999999999999999999765 458999999999887  67888


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ..|++||+++++|+++++.|+.+. |+|++++||+++|++...
T Consensus       146 ~~Y~~sK~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~  187 (252)
T PRK07856        146 AAYGAAKAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSEL  187 (252)
T ss_pred             chhHHHHHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhh
Confidence            999999999999999999999887 999999999999998653

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=3.2e-32  Score=234.41  Aligned_cols=192  Identities=16%  Similarity=0.147  Sum_probs=156.2

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcC-CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G-~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      .+|+++||||++|||+++|++|+++| ++|++++|+.++.++..+++...  +..+..+.+|+++.  +++.++++.+.+
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   79 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMP--KDSYTIMHLDLGSLDSVRQFVQQFRESG   79 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            47899999999999999999999999 99999999998888777776432  34677888999873  456666666655


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC--CcEEEEECCccccccC------
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK--KGAIVNIGSGAAIVIP------  200 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~--~g~iv~vsS~~~~~~~------  200 (255)
                      +  ++|++|||||+..+ ..+..+.+.++|++++++|+.+++.+++.++|.|++++  .|+||++||..+....      
T Consensus        80 ~--~iD~lI~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~  156 (314)
T TIGR01289        80 R--PLDALVCNAAVYFP-TAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVP  156 (314)
T ss_pred             C--CCCEEEECCCcccc-CccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCC
Confidence            5  46699999998542 12234678899999999999999999999999998764  5899999998764310      


Q ss_pred             -------------------------CCCCchhchHHHHHHHHHHHHHHHHHc-cCCceEEEeeeeee-eeCCcch
Q 025260          201 -------------------------SDPLYSVYAATKAYIDQFSRSLYVEYR-KSGIDVQCQVLFLL-CFYNLND  248 (255)
Q Consensus       201 -------------------------~~~~~~~Y~asK~al~~~~~~l~~e~~-~~gi~v~~v~Pg~v-~T~~~~~  248 (255)
                                               +..+...|++||+|+..+++.|++++. +.||+|++++||+| +|+|.+.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~  231 (314)
T TIGR01289       157 PKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFRE  231 (314)
T ss_pred             CcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCccccc
Confidence                                     112356799999999999999999985 46999999999999 6998754

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-32  Score=228.11  Aligned_cols=189  Identities=24%  Similarity=0.290  Sum_probs=159.3

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      ++++||+++||||++|||+++|++|+++|++|++++|+++.. +..+++.+.  +.++..+.+|+++.  +++.++++.+
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL--QPRAEFVQVDLTDDAQCRDAVEQTVA   79 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            467799999999999999999999999999999999998776 666666554  34578899999874  3455566666


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .++  .+|++|||||....  ..+++.+ ++|++.+++|+.+++.+++.++|.|.++ .|+||++||..+..  +.+...
T Consensus        80 ~~~--~id~vi~~ag~~~~--~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~--~~~~~~  151 (258)
T PRK08628         80 KFG--RIDGLVNNAGVNDG--VGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALT--GQGGTS  151 (258)
T ss_pred             hcC--CCCEEEECCcccCC--CcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhcc--CCCCCc
Confidence            555  46699999997543  2344444 8899999999999999999999988654 58999999998887  667889


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      .|++||+++++++++++.|+.++||+|+.|+||.++|++.++
T Consensus       152 ~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~  193 (258)
T PRK08628        152 GYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYEN  193 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHH
Confidence            999999999999999999999999999999999999998654

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-32  Score=226.82  Aligned_cols=190  Identities=23%  Similarity=0.329  Sum_probs=164.4

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      ++++++++||||++|||++++++|+++|++|++++|+.+++++..+++...  +.++..+.+|+++.  +++.++++.+.
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA--GRRAHVVAADLAHPEATAGLAGQAVEA   84 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            466999999999999999999999999999999999998888877777553  34577889999974  35556666666


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhh-CCCcEEEEECCccccccCCCCCch
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK-RKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~-~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      ++  ++|++|||||....  .++.+.+.+++++++++|+.+++.+++++.|.|.+ ++.|++|++||..+..  +.++..
T Consensus        85 ~~--~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~~  158 (263)
T PRK07814         85 FG--RLDIVVNNVGGTMP--NPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL--AGRGFA  158 (263)
T ss_pred             cC--CCCEEEECCCCCCC--CChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC--CCCCCc
Confidence            66  46699999998643  45778899999999999999999999999999987 4678999999998887  678889


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      .|++||+++++++++++.|+.+ +|+|++++||++.|++.+.
T Consensus       159 ~Y~~sK~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~  199 (263)
T PRK07814        159 AYGTAKAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEV  199 (263)
T ss_pred             hhHHHHHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhh
Confidence            9999999999999999999987 6999999999999998653

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-32  Score=225.28  Aligned_cols=191  Identities=24%  Similarity=0.309  Sum_probs=166.9

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||.+++++|+++|++|++++|+.+..++..+++.   .+.++..+.+|++|.  +++.++.+.+.
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~i~~~   78 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA---AGGRAFARQGDVGSAEAVEALVDFVAAR   78 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4569999999999999999999999999999999999888877776665   245688899999974  45666777776


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++  ++|++|||+|....  .++.+.+.+++++.+++|+.+++.+++.++|.|++++.++|+++||..+..  +.+...+
T Consensus        79 ~~--~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~--~~~~~~~  152 (252)
T PRK06138         79 WG--RLDVLVNNAGFGCG--GTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALA--GGRGRAA  152 (252)
T ss_pred             cC--CCCEEEECCCCCCC--CCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhcc--CCCCccH
Confidence            66  46699999998654  456788899999999999999999999999999888889999999998877  5677899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |+++|++++.++++++.|+.++|+++++++||++.|++.++.
T Consensus       153 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~  194 (252)
T PRK06138        153 YVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRI  194 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhh
Confidence            999999999999999999999999999999999999987654

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.2e-32  Score=225.24  Aligned_cols=194  Identities=26%  Similarity=0.388  Sum_probs=165.7

Q ss_pred             cccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHH
Q 025260           47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI  124 (255)
Q Consensus        47 ~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~  124 (255)
                      +..++++|+++||||++|||++++++|+++|++|++++|+++++++..+++....  .++..+.+|+++.  +++.++++
T Consensus         3 ~~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~   80 (258)
T PRK06949          3 RSINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEG--GAAHVVSLDVTDYQSIKAAVAHA   80 (258)
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHH
Confidence            3455779999999999999999999999999999999999998888877776543  3577888999873  45555666


Q ss_pred             HHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC--------CcEEEEECCccc
Q 025260          125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK--------KGAIVNIGSGAA  196 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~--------~g~iv~vsS~~~  196 (255)
                      .+.++  ++|++|||||....  .++.+.+.++|+.++++|+.+++.++++++|.|.++.        .|++|++||..+
T Consensus        81 ~~~~~--~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~  156 (258)
T PRK06949         81 ETEAG--TIDILVNNSGVSTT--QKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAG  156 (258)
T ss_pred             HHhcC--CCCEEEECCCCCCC--CCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccc
Confidence            65555  46699999998643  4567788899999999999999999999999997664        479999999988


Q ss_pred             cccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          197 IVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       197 ~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ..  +.+...+|+++|++++.++++++.|+.++||+|++++||+++|++.+.
T Consensus       157 ~~--~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~  206 (258)
T PRK06949        157 LR--VLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHH  206 (258)
T ss_pred             cC--CCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchh
Confidence            77  667788999999999999999999999999999999999999998764

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-32  Score=228.98  Aligned_cols=182  Identities=29%  Similarity=0.322  Sum_probs=155.4

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      ++++|+++||||++|||++++++|+++|++|++.+|+++..+           ..++..+.+|+++.  +++.++++.+.
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~~   74 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-----------HENYQFVPTDVSSAEEVNHTVAEIIEK   74 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-----------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999999876532           23567889999874  46666777776


Q ss_pred             hcCCCccEEEEecCCCCCcc-------cccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC
Q 025260          128 IEGLDVGVLINNVGISYPYA-------RFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP  200 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~-------~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~  200 (255)
                      +++  +|++|||||...+..       .+..+.+.++|++++++|+.+++.+++++.|+|++++.|+||++||..+..  
T Consensus        75 ~g~--id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--  150 (266)
T PRK06171         75 FGR--IDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLE--  150 (266)
T ss_pred             cCC--CCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccC--
Confidence            664  569999999753211       123467899999999999999999999999999888889999999999887  


Q ss_pred             CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeee-eCCc
Q 025260          201 SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLC-FYNL  246 (255)
Q Consensus       201 ~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~-T~~~  246 (255)
                      +.++...|++||+|+++|+++++.|+.++||+||+|+||++. |++.
T Consensus       151 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~  197 (266)
T PRK06171        151 GSEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLR  197 (266)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCc
Confidence            667889999999999999999999999999999999999997 6664

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=7.7e-32  Score=225.16  Aligned_cols=195  Identities=19%  Similarity=0.225  Sum_probs=161.4

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      ++||+++||||++|||+++|++|+++|++|++++|+++++++..+++....+...+.++.+|++|.  +.++++++.+.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            358999999999999999999999999999999999998888888876554444566779999974  456666666666


Q ss_pred             cCCCccEEEEecCCCCC-cccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCC------
Q 025260          129 EGLDVGVLINNVGISYP-YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS------  201 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~------  201 (255)
                      +  ++|++|||||.... ...++.+.+.+++++.+++|+.+++.+++.++|.|++++.|+||++||..+...+.      
T Consensus        82 ~--~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~  159 (256)
T PRK09186         82 G--KIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEG  159 (256)
T ss_pred             C--CccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccc
Confidence            6  46699999986432 12457788999999999999999999999999999888889999999987764211      


Q ss_pred             --CCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          202 --DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       202 --~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                        ......|++||++++++++++++|+.++||+|++++||.+.|+...
T Consensus       160 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~  207 (256)
T PRK09186        160 TSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPE  207 (256)
T ss_pred             cccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCH
Confidence              0112369999999999999999999999999999999999887643

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.5e-32  Score=225.52  Aligned_cols=190  Identities=24%  Similarity=0.264  Sum_probs=158.9

Q ss_pred             ccCCcEEEEECCCC--chHHHHHHHHHHcCCcEEEEeCC-----------hhhHHHHHHHHHhhcCCceEEEEEEECCCC
Q 025260           50 RKYGSWALVTGPTD--GIGKSFAFQLAKTGLNLVLVGRN-----------PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD  116 (255)
Q Consensus        50 ~~~gk~vlITGas~--gIG~~la~~la~~G~~V~l~~r~-----------~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  116 (255)
                      ++++|+++||||++  |||.++|++|+++|++|++++|+           .....+..+++.+.  +.++..+.+|+++.
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~   79 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY--GVRCEHMEIDLSQP   79 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc--CCeEEEEECCCCCH
Confidence            35689999999994  99999999999999999999987           22222233444332  34688899999973


Q ss_pred             --cHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCc
Q 025260          117 --LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSG  194 (255)
Q Consensus       117 --~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~  194 (255)
                        ++..++++.+.++.  +|++|||||+...  .++.+.+.+++++.+++|+.+++.++++++|.|.+++.+++|++||.
T Consensus        80 ~~~~~~~~~~~~~~g~--id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~  155 (256)
T PRK12748         80 YAPNRVFYAVSERLGD--PSILINNAAYSTH--TRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSG  155 (256)
T ss_pred             HHHHHHHHHHHHhCCC--CCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCc
Confidence              45566777776664  6699999998643  45778899999999999999999999999999977777999999999


Q ss_pred             cccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          195 AAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       195 ~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      .+..  +.++...|++||+|+++++++++.|+.+.||+|+.++||+++|++..
T Consensus       156 ~~~~--~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~  206 (256)
T PRK12748        156 QSLG--PMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWIT  206 (256)
T ss_pred             cccC--CCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCC
Confidence            8877  66788899999999999999999999999999999999999999765

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-32  Score=225.79  Aligned_cols=190  Identities=26%  Similarity=0.329  Sum_probs=163.7

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      +++|+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.  ..++..+.+|++|.  ++..++.+.+.+
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL--GRRALAVPTDITDEDQCANLVALALERF   80 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999999999999999998888877777654  34578899999874  455666666666


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++  +|++|||||...+ ..++.+.+.+++++.+++|+.+++.+++++.|.|.++ +++||++||..+..  +.++...|
T Consensus        81 g~--~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~--~~~~~~~Y  154 (258)
T PRK07890         81 GR--VDALVNNAFRVPS-MKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES-GGSIVMINSMVLRH--SQPKYGAY  154 (258)
T ss_pred             CC--ccEEEECCccCCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCEEEEEechhhcc--CCCCcchh
Confidence            64  6699999997543 2457788899999999999999999999999988655 47999999998877  67888999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      +++|++++.++++++.|+.++||++++++||++.||+...
T Consensus       155 ~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~  194 (258)
T PRK07890        155 KMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKG  194 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHH
Confidence            9999999999999999999999999999999999997653

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-32  Score=226.82  Aligned_cols=191  Identities=31%  Similarity=0.452  Sum_probs=160.9

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      +++|+++||||++|||++++++|+++|++|++++|+++ ..+..+++...  +.++..+.+|+++.  +++.++++.+.+
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   80 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR--GHRCTAVVADVRDPASVAAAIKRAKEKE   80 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999999999999999875 34444444432  34577889999973  456667777766


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++  +|++|||||....  .++.+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||..+... +.++...|
T Consensus        81 ~~--id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-~~~~~~~Y  155 (263)
T PRK08226         81 GR--IDILVNNAGVCRL--GSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMV-ADPGETAY  155 (263)
T ss_pred             CC--CCEEEECCCcCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccc-CCCCcchH
Confidence            64  6699999998643  4577888999999999999999999999999998877889999999877431 45678899


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      +++|+++++++++++.|+.++||+|++++||++.|+|.+..
T Consensus       156 ~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~  196 (263)
T PRK08226        156 ALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESI  196 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhh
Confidence            99999999999999999999999999999999999987654

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.9e-32  Score=226.55  Aligned_cols=187  Identities=22%  Similarity=0.310  Sum_probs=159.7

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      ++++|+++||||++|||.+++++|+++|++|++++|+.+.+++..+++.+.+  .++..+.+|+++.  +++.++++.+.
T Consensus         6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~i~~~~~~~~~~   83 (264)
T PRK07576          6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAG--PEGLGVSADVRDYAAVEAAFAQIADE   83 (264)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC--CceEEEECCCCCHHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999999988877777776543  3467888999873  45555666665


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++  ++|++|||||....  .++.+.+.+++++.+++|+.++++++++++|.|.++ +|+||++||..+..  +.+....
T Consensus        84 ~~--~iD~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~~--~~~~~~~  156 (264)
T PRK07576         84 FG--PIDVLVSGAAGNFP--APAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAFV--PMPMQAH  156 (264)
T ss_pred             cC--CCCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhcc--CCCCccH
Confidence            55  46699999997643  457788999999999999999999999999988654 58999999998876  6678899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeee-eCC
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLC-FYN  245 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~-T~~  245 (255)
                      |++||+|+++|+++++.|+.++||+|+.++||++. |+.
T Consensus       157 Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~  195 (264)
T PRK07576        157 VCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEG  195 (264)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHH
Confidence            99999999999999999999999999999999997 653

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.2e-32  Score=223.22  Aligned_cols=188  Identities=30%  Similarity=0.424  Sum_probs=163.9

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhc
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE  129 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~  129 (255)
                      ++|+++||||++|||++++++|+++|++|++++|++++.++..+++++.  ..++..+.+|+++.  +.+.++.+.+.++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST--GVKAAAYSIDLSNPEAIAPGIAELLEQFG   82 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999998888777777653  34677889999874  3455666666666


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhch
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA  209 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~  209 (255)
                      +  +|++|||||....  .++.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..  +.++...|+
T Consensus        83 ~--id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~~Y~  156 (241)
T PRK07454         83 C--PDVLINNAGMAYT--GPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARN--AFPQWGAYC  156 (241)
T ss_pred             C--CCEEEECCCccCC--CchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCc--CCCCccHHH
Confidence            4  6699999998653  456788899999999999999999999999999888789999999998877  667889999


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      +||++++.++++++.|+.+.|+++++|+||+++|++.+
T Consensus       157 ~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~  194 (241)
T PRK07454        157 VSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWD  194 (241)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccc
Confidence            99999999999999999999999999999999999865

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=9.2e-32  Score=224.44  Aligned_cols=189  Identities=25%  Similarity=0.319  Sum_probs=164.6

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcCC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGL  131 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~  131 (255)
                      |+++||||++|||.+++++|+++|++|++++|+.+.+++..+++.+.  +.++..+.+|++|.  +++.++.+.+.++  
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~--   76 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA--GGKAVAYKLDVSDKDQVFSAIDQAAEKFG--   76 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcC--
Confidence            68999999999999999999999999999999988888777777654  44678889999874  3556666666666  


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCchhchH
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAA  210 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~Y~a  210 (255)
                      ++|++|||||....  .++.+.+.++|++.+++|+.+++.+++.+++.|++++ ++++|++||..+..  +.+....|++
T Consensus        77 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~Y~~  152 (254)
T TIGR02415        77 GFDVMVNNAGVAPI--TPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHE--GNPILSAYSS  152 (254)
T ss_pred             CCCEEEECCCcCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcC--CCCCCcchHH
Confidence            46699999998643  4577889999999999999999999999999998765 48999999998887  6788999999


Q ss_pred             HHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          211 TKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       211 sK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      ||+++++|+++++.|+.+.||+|+.++||+++|++.++..
T Consensus       153 sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~  192 (254)
T TIGR02415       153 TKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEID  192 (254)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhh
Confidence            9999999999999999999999999999999999976543

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8e-32  Score=227.74  Aligned_cols=185  Identities=23%  Similarity=0.300  Sum_probs=160.5

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhc
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE  129 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~  129 (255)
                      .+|+++||||++|||++++++|+++|++|++.+|+.+.+++..++.     ...+..+.+|++|.  +++.++++.+.++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-----GDRLLPLALDVTDRAAVFAAVETAVEHFG   76 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-----cCCeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3689999999999999999999999999999999988776654432     23467789999874  4555566666566


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhch
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA  209 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~  209 (255)
                        ++|++|||||....  .++.+.+.+++++.+++|+.+++.+++.++|.|++++.+++|++||..+..  +.+....|+
T Consensus        77 --~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~--~~~~~~~Y~  150 (275)
T PRK08263         77 --RLDIVVNNAGYGLF--GMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGIS--AFPMSGIYH  150 (275)
T ss_pred             --CCCEEEECCCCccc--cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcC--CCCCccHHH
Confidence              45699999998754  567888999999999999999999999999999888789999999998887  678889999


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      +||+++++++++++.|+.+.|++|+.++||++.|++.+
T Consensus       151 ~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~  188 (275)
T PRK08263        151 ASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAG  188 (275)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccc
Confidence            99999999999999999999999999999999999874

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-32  Score=226.01  Aligned_cols=189  Identities=26%  Similarity=0.309  Sum_probs=156.9

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      ++||+++||||++|||.+++++|+++|++|++++|+.++.++..+++.     .  ..+.+|+++.  +++.++++.+..
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~--~~~~~D~~~~~~~~~~~~~~~~~~   77 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG-----G--LFVPTDVTDEDAVNALFDTAAETY   77 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-----C--cEEEeeCCCHHHHHHHHHHHHHHc
Confidence            559999999999999999999999999999999999877666555431     1  4678888873  455556665555


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      +  ++|++|||||...+...++.+.+.+.+++.+++|+.+++.+++.++|.|++++.|+||++||..+... +.++...|
T Consensus        78 ~--~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g-~~~~~~~Y  154 (255)
T PRK06057         78 G--SVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMG-SATSQISY  154 (255)
T ss_pred             C--CCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccC-CCCCCcch
Confidence            5  46699999998643234567788999999999999999999999999998888899999999876652 12356789


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ++||+|+.++++.++.|+.++||+|++++||+++||+.+..
T Consensus       155 ~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~  195 (255)
T PRK06057        155 TASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQEL  195 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhh
Confidence            99999999999999999999999999999999999987643

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-32  Score=223.00  Aligned_cols=175  Identities=18%  Similarity=0.233  Sum_probs=141.1

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG  134 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id  134 (255)
                      .++||||++|||++++++|+++|++|++.+|+.+++++..+++       ....+.+|+++.  +.++++.+.+.+ ++|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~--~~v~~~~~~~~~-~id   71 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-------DVDAIVCDNTDP--ASLEEARGLFPH-HLD   71 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-------cCcEEecCCCCH--HHHHHHHHHHhh-cCc
Confidence            4899999999999999999999999999999988877665543       235678899875  333444443332 577


Q ss_pred             EEEEecCCCCCc----ccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchH
Q 025260          135 VLINNVGISYPY----ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA  210 (255)
Q Consensus       135 ~lv~nag~~~~~----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~a  210 (255)
                      ++|||||.....    ..++.+ +.++|++++++|+.++++++|+++|.|.+  +|+||++||.+      .+....|++
T Consensus        72 ~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~------~~~~~~Y~a  142 (223)
T PRK05884         72 TIVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPEN------PPAGSAEAA  142 (223)
T ss_pred             EEEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCC------CCCccccHH
Confidence            999999863211    112334 57889999999999999999999999954  48999999965      134578999


Q ss_pred             HHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          211 TKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       211 sK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ||+|+.+|+++++.|+.++||+||+|+||+++|++.+.
T Consensus       143 sKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~  180 (223)
T PRK05884        143 IKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDG  180 (223)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhh
Confidence            99999999999999999999999999999999997643

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-31  Score=225.63  Aligned_cols=189  Identities=27%  Similarity=0.414  Sum_probs=162.6

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      ++++++++||||++|||.+++++|+++|++|++++|+++.+++..+++ +.  +.++..+.+|++|.  +++.++.+.+ 
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~--~~~~~~~~~D~~d~~~~~~~~~~~~~-   77 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PY--PGRHRWVVADLTSEAGREAVLARARE-   77 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hc--CCceEEEEccCCCHHHHHHHHHHHHh-
Confidence            346899999999999999999999999999999999998888777776 22  34678899999974  2344444443 


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++  ++|++|||||....  .++.+.+.+++++++++|+.|++.+++.++|+|.+++.|++|++||..+..  +.++...
T Consensus        78 ~~--~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~~  151 (263)
T PRK09072         78 MG--GINVLINNAGVNHF--ALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSI--GYPGYAS  151 (263)
T ss_pred             cC--CCCEEEECCCCCCc--cccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCc--CCCCccH
Confidence            34  56799999998643  457788999999999999999999999999999888789999999998877  6778899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      |+++|+|+.+++++++.|+.+.||+|++++||+++|++.+.
T Consensus       152 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~  192 (263)
T PRK09072        152 YCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSE  192 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhh
Confidence            99999999999999999999999999999999999998654

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.2e-31  Score=223.55  Aligned_cols=190  Identities=22%  Similarity=0.270  Sum_probs=155.8

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeC-ChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      .+++|+++||||++|||+++|++|+++|++|++.++ +.+..++..+++     ..++..+.+|+++.  ++++++++.+
T Consensus         2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (253)
T PRK08642          2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL-----GDRAIALQADVTDREQVQAMFATATE   76 (253)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            356899999999999999999999999999988765 444444433332     24677889999873  4566677766


Q ss_pred             HhcCCCccEEEEecCCCCC----cccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC
Q 025260          127 AIEGLDVGVLINNVGISYP----YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD  202 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~----~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~  202 (255)
                      .++. ++|++|||||....    ...++.+.+.+++++.+++|+.+++.+++.++|.|.+++.|+||++||..+..  +.
T Consensus        77 ~~g~-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~--~~  153 (253)
T PRK08642         77 HFGK-PITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN--PV  153 (253)
T ss_pred             HhCC-CCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC--CC
Confidence            6664 37799999997421    12347788999999999999999999999999999877789999999987655  55


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      ++...|++||+|+++|++++++|+.++||+||+|+||+++|+...
T Consensus       154 ~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~  198 (253)
T PRK08642        154 VPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDAS  198 (253)
T ss_pred             CCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhh
Confidence            567899999999999999999999999999999999999998654

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.4e-31  Score=222.82  Aligned_cols=192  Identities=28%  Similarity=0.368  Sum_probs=166.6

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      +++++++||||++|||.+++++|+++|++|++++|+.++.++..+++..   +.++.++.+|++|.  +++.++++.+.+
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA---GGRAIAVAADVSDEADVEAAVAAALERF   79 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            5689999999999999999999999999999999999888777666644   34578899999873  455556666666


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      +  ++|++|||||.... ..++.+.+.+++++.+++|+.+++.+++.++|.|.+++.+++|++||..+..  +.++...|
T Consensus        80 ~--~~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~y  154 (251)
T PRK07231         80 G--SVDILVNNAGTTHR-NGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLR--PRPGLGWY  154 (251)
T ss_pred             C--CCCEEEECCCCCCC-CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcC--CCCCchHH
Confidence            5  46699999998543 2457788999999999999999999999999999888889999999998887  77888999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      +.||++++.+++.++.|+.+.||++++++||++.|++.....
T Consensus       155 ~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~  196 (251)
T PRK07231        155 NASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFM  196 (251)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhh
Confidence            999999999999999999988999999999999999877643

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-31  Score=224.90  Aligned_cols=185  Identities=24%  Similarity=0.331  Sum_probs=160.0

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH-hcC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA-IEG  130 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~-~~~  130 (255)
                      |+++||||++|||++++++|+++|++|++++|+.+.+++..+++.    +..+..+.+|+++.  +++.++.+.+. .+ 
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~-   76 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG----AGNAWTGALDVTDRAAWDAALADFAAATGG-   76 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCC-
Confidence            689999999999999999999999999999999988777666543    34678889999874  34444444443 23 


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchH
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA  210 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~a  210 (255)
                       ++|++|||||....  .++.+.+.+++++++++|+.+++.+++++.|.|.+++.++||++||..+..  +.+....|++
T Consensus        77 -~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~~Y~~  151 (260)
T PRK08267         77 -RLDVLFNNAGILRG--GPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIY--GQPGLAVYSA  151 (260)
T ss_pred             -CCCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCc--CCCCchhhHH
Confidence             57799999998754  557788999999999999999999999999999888889999999998887  6778899999


Q ss_pred             HHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          211 TKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       211 sK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ||+++++|+++++.|+.+.||++++++||+++|++.+.
T Consensus       152 sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~  189 (260)
T PRK08267        152 TKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDG  189 (260)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCccccc
Confidence            99999999999999999999999999999999998764

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-31  Score=222.22  Aligned_cols=188  Identities=21%  Similarity=0.232  Sum_probs=160.4

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      |+++||||++|||.+++++|+++|++|++++|++++.++..+++...+ ..++..+.+|+++.  +.++++.+.... ++
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~--~~~~~~~~~~~~-~~   77 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARG-AVAVSTHELDILDT--ASHAAFLDSLPA-LP   77 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEecCCCCh--HHHHHHHHHHhh-cC
Confidence            689999999999999999999999999999999988887777776543 45788899999975  333333333322 35


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHHHH
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKA  213 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~asK~  213 (255)
                      |++|||+|....  ....+.+.+++++.+++|+.+++++++++.|.|.+++.+++|++||..+..  +.++...|++||+
T Consensus        78 d~vv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~Y~~sK~  153 (243)
T PRK07102         78 DIVLIAVGTLGD--QAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDR--GRASNYVYGSAKA  153 (243)
T ss_pred             CEEEECCcCCCC--cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccC--CCCCCcccHHHHH
Confidence            799999998654  446788899999999999999999999999999888889999999998877  5677889999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          214 YIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       214 al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ++.+++++++.|+.+.||+|++++||+++|++.+..
T Consensus       154 a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~  189 (243)
T PRK07102        154 ALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL  189 (243)
T ss_pred             HHHHHHHHHHHHhhccCcEEEEEecCcccChhhhcc
Confidence            999999999999999999999999999999976553

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=9.8e-32  Score=222.15  Aligned_cols=180  Identities=18%  Similarity=0.206  Sum_probs=150.1

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~  130 (255)
                      +|+++||||++|||+++|++|+++|++|++++|++++..   +++.+.  +  ...+.+|++|  ++++.++++.+.+++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~--~--~~~~~~D~~~~~~~~~~~~~~~~~~~~   74 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQA--G--AQCIQADFSTNAGIMAFIDELKQHTDG   74 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHc--C--CEEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence            589999999999999999999999999999999876543   233222  2  4568889987  345666666666664


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC--CcEEEEECCccccccCCCCCchhc
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK--KGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~--~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                        +|++|||||....  ....+.+.++|++++++|+.+++.+++.++|.|.+++  .|+||++||..+..  +.++...|
T Consensus        75 --id~lv~~ag~~~~--~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~--~~~~~~~Y  148 (236)
T PRK06483         75 --LRAIIHNASDWLA--EKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEK--GSDKHIAY  148 (236)
T ss_pred             --ccEEEECCccccC--CCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhcc--CCCCCccH
Confidence              6699999998643  2345778899999999999999999999999998765  68999999988776  66788999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                      ++||+|+++|+++++.|+.+ +|+||+|+||++.|+..
T Consensus       149 ~asKaal~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~  185 (236)
T PRK06483        149 AASKAALDNMTLSFAAKLAP-EVKVNSIAPALILFNEG  185 (236)
T ss_pred             HHHHHHHHHHHHHHHHHHCC-CcEEEEEccCceecCCC
Confidence            99999999999999999987 59999999999988654

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=5.8e-32  Score=232.26  Aligned_cols=187  Identities=17%  Similarity=0.177  Sum_probs=152.3

Q ss_pred             EEECCCCchHHHHHHHHHHcC-CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcCCCc
Q 025260           57 LVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGLDV  133 (255)
Q Consensus        57 lITGas~gIG~~la~~la~~G-~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~~i  133 (255)
                      +||||++|||+++|++|+++| ++|++++|+.++.++..+++...  ..++..+.+|++|.  ++++++.+.+.++  .+
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~--~i   76 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMP--KDSYTVMHLDLASLDSVRQFVDNFRRSGR--PL   76 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEEecCCCHHHHHHHHHHHHhcCC--CC
Confidence            699999999999999999999 99999999998888777776432  34577889999873  4555666655444  46


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC--CcEEEEECCcccccc------C-----
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK--KGAIVNIGSGAAIVI------P-----  200 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~--~g~iv~vsS~~~~~~------~-----  200 (255)
                      |+||||||+..+ ..+..+.+.++|++++++|+.|++.+++.++|.|++++  +|+||++||..+...      +     
T Consensus        77 D~lInnAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  155 (308)
T PLN00015         77 DVLVCNAAVYLP-TAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANL  155 (308)
T ss_pred             CEEEECCCcCCC-CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccch
Confidence            699999998543 22456788999999999999999999999999998776  689999999876421      0     


Q ss_pred             ----------------------CCCCchhchHHHHHHHHHHHHHHHHHcc-CCceEEEeeeeee-eeCCcch
Q 025260          201 ----------------------SDPLYSVYAATKAYIDQFSRSLYVEYRK-SGIDVQCQVLFLL-CFYNLND  248 (255)
Q Consensus       201 ----------------------~~~~~~~Y~asK~al~~~~~~l~~e~~~-~gi~v~~v~Pg~v-~T~~~~~  248 (255)
                                            +.++...|++||+|+..+++.+++|+.+ .||+|++++||+| .|+|.++
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~  227 (308)
T PLN00015        156 GDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFRE  227 (308)
T ss_pred             hhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCcccccc
Confidence                                  0124567999999999999999999965 6999999999999 7998754

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-31  Score=226.62  Aligned_cols=189  Identities=30%  Similarity=0.370  Sum_probs=164.0

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhc
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE  129 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~  129 (255)
                      ++|+++||||+||||++++++|+++|++|++++|+.+..++..+++.+...+.++..+.+|++|.  +++ ++++.+.++
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            47899999999999999999999999999999999988888777766544345688899999984  233 455555555


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhch
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA  209 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~  209 (255)
                        ++|++|||||...+  ....+.+.+++++.+++|+.+++.+++.++|.|++++.+++|++||..+..  +.++...|+
T Consensus        81 --~id~vv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~--~~~~~~~Y~  154 (280)
T PRK06914         81 --RIDLLVNNAGYANG--GFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRV--GFPGLSPYV  154 (280)
T ss_pred             --CeeEEEECCccccc--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccC--CCCCCchhH
Confidence              46799999998754  457788999999999999999999999999999888789999999988877  667889999


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      +||+++++|+++++.|+.++||++++++||+++|++++
T Consensus       155 ~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~  192 (280)
T PRK06914        155 SSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWE  192 (280)
T ss_pred             HhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhh
Confidence            99999999999999999999999999999999999865

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-31  Score=222.47  Aligned_cols=185  Identities=25%  Similarity=0.282  Sum_probs=157.4

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      ++||+++||||++|||++++++|+++|++|++++|+++.+++..+++     +.++..+.+|+++.  +++.++.+.+.+
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-----GESALVIRADAGDVAAQKALAQALAEAF   78 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            45899999999999999999999999999999999987776655544     34577889999874  345556666666


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      +  ++|++|||||....  .++.+.+.+++++.+++|+.+++.++++++|.|.+  .+++|+++|..+..  +.+...+|
T Consensus        79 ~--~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~i~~~S~~~~~--~~~~~~~Y  150 (249)
T PRK06500         79 G--RLDAVFINAGVAKF--APLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN--PASIVLNGSINAHI--GMPNSSVY  150 (249)
T ss_pred             C--CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEechHhcc--CCCCccHH
Confidence            6  46699999998643  45678899999999999999999999999998843  47899999988877  66788999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      +++|+++++++++++.|+.++||++++++||.+.||+.+.
T Consensus       151 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~  190 (249)
T PRK06500        151 AASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGK  190 (249)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHh
Confidence            9999999999999999999999999999999999997653

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-31  Score=225.53  Aligned_cols=181  Identities=23%  Similarity=0.332  Sum_probs=153.8

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcCC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGL  131 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~  131 (255)
                      |+++||||++|||++++++|+++|++|++++|+.+++++..    +.    .+..+.+|+++.  +++.++.+.+.++  
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~~----~~~~~~~Dl~~~~~~~~~~~~~~~~~~--   71 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----AA----GFTAVQLDVNDGAALARLAEELEAEHG--   71 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HC----CCeEEEeeCCCHHHHHHHHHHHHHhcC--
Confidence            68999999999999999999999999999999987655432    11    246788999873  3455555655555  


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHH
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAAT  211 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~as  211 (255)
                      ++|++|||||....  .++.+.+.+++++.+++|+.|++.+++.++|.|.+ +.|+||++||..+..  +.+....|++|
T Consensus        72 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~g~iv~isS~~~~~--~~~~~~~Y~~s  146 (274)
T PRK05693         72 GLDVLINNAGYGAM--GPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRR-SRGLVVNIGSVSGVL--VTPFAGAYCAS  146 (274)
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh-cCCEEEEECCccccC--CCCCccHHHHH
Confidence            46699999998643  45778899999999999999999999999998864 458999999999887  66788999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          212 KAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       212 K~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |+++++|+++++.|++++||+|++++||+++|++.+..
T Consensus       147 K~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~  184 (274)
T PRK05693        147 KAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNA  184 (274)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEecCcccccccccc
Confidence            99999999999999999999999999999999987753

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.6e-31  Score=221.19  Aligned_cols=188  Identities=22%  Similarity=0.359  Sum_probs=160.9

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCC-hhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcCCC
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGLD  132 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~~  132 (255)
                      ++||||++|||++++++|+++|++|++++|+ .+.+++..+++.+.........+.+|++|.  +++.++++.+.+++  
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~--   79 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGG--   79 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCC--
Confidence            7999999999999999999999999999998 677777777766543334456788999873  45666677776664  


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHHH
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATK  212 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~asK  212 (255)
                      +|++|||||....  .++.+.+.+++++++++|+.+++.+++.++|.|.+++.++||++||..+..  +.++...|+++|
T Consensus        80 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~--~~~~~~~Y~~sK  155 (251)
T PRK07069         80 LSVLVNNAGVGSF--GAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFK--AEPDYTAYNASK  155 (251)
T ss_pred             ccEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhcc--CCCCCchhHHHH
Confidence            5699999998654  457788999999999999999999999999999888789999999999887  667889999999


Q ss_pred             HHHHHHHHHHHHHHccCC--ceEEEeeeeeeeeCCcchh
Q 025260          213 AYIDQFSRSLYVEYRKSG--IDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       213 ~al~~~~~~l~~e~~~~g--i~v~~v~Pg~v~T~~~~~~  249 (255)
                      +++++|+++++.|+.+++  |+|+.++||+++||+.+..
T Consensus       156 ~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~  194 (251)
T PRK07069        156 AAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPI  194 (251)
T ss_pred             HHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHH
Confidence            999999999999997665  9999999999999997643

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-31  Score=224.50  Aligned_cols=194  Identities=23%  Similarity=0.263  Sum_probs=165.7

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      ++++|+++||||++|||.+++++|+++|++|++++|+.++.++..+++.+.....++..+.+|++|.  +++.++++.+.
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999999888877777766543335678889999874  34555666665


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|++|||||.... ..++.+.+.+++++++++|+.+++.+++.+++.|++++.|+|+++||..+..  +.+...+
T Consensus        84 ~~~--~d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~~~  158 (276)
T PRK05875         84 HGR--LHGVVHCAGGSET-IGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASN--THRWFGA  158 (276)
T ss_pred             cCC--CCEEEECCCcccC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcC--CCCCCcc
Confidence            654  5699999997532 2456778899999999999999999999999999888789999999998876  5677899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      |++||++++.+++.++.|+...||++++++||+++|++...
T Consensus       159 Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~  199 (276)
T PRK05875        159 YGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAP  199 (276)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccc
Confidence            99999999999999999999999999999999999998754

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-31  Score=220.57  Aligned_cols=190  Identities=26%  Similarity=0.355  Sum_probs=165.8

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      +++|+++||||++|||++++++|+++|++|++++|+++++++..+++++.  ..++..+.+|+++.  +++.++++.+.+
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA--GGRAHAIAADLADPASVQRFFDAAAAAL   82 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999999999999999999888887777654  34678889999873  355556666655


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      +  ++|++|||+|....  .++.+.+.+++++.+++|+.+++.+++.+.|.|.+++.|++|++||..+..  +.+....|
T Consensus        83 ~--~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~y  156 (250)
T PRK12939         83 G--GLDGLVNNAGITNS--KSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALW--GAPKLGAY  156 (250)
T ss_pred             C--CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhcc--CCCCcchH
Confidence            5  46699999998754  456788999999999999999999999999999887789999999988877  66778899


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      +++|++++++++.++.|+.+.+|++++++||++.|++...
T Consensus       157 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~  196 (250)
T PRK12939        157 VASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAY  196 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccc
Confidence            9999999999999999999999999999999999998754

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-31  Score=225.67  Aligned_cols=178  Identities=19%  Similarity=0.242  Sum_probs=145.6

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~  130 (255)
                      +|+++|||| +|||+++|++|+ +|++|++++|+++++++..+++.+.  +.++..+.+|++|.  +++.++++ +.++ 
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g-   75 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA--GFDVSTQEVDVSSRESVKALAATA-QTLG-   75 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHH-HhcC-
Confidence            689999998 699999999996 8999999999998888877777653  34678889999974  34444544 2344 


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCC---------
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS---------  201 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~---------  201 (255)
                       ++|++|||||+..         +.++|++++++|+.+++++++.++|.|.+  +|++|++||.++...+.         
T Consensus        76 -~id~li~nAG~~~---------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~~~~~  143 (275)
T PRK06940         76 -PVTGLVHTAGVSP---------SQASPEAILKVDLYGTALVLEEFGKVIAP--GGAGVVIASQSGHRLPALTAEQERAL  143 (275)
T ss_pred             -CCCEEEECCCcCC---------chhhHHHHHHHhhHHHHHHHHHHHHHHhh--CCCEEEEEecccccCcccchhhhccc
Confidence             5779999999742         12568999999999999999999999864  37789999988765210         


Q ss_pred             -------------------CCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          202 -------------------DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       202 -------------------~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                                         .++...|++||+|+.+++++++.|+.++||+||+|+||+++|++..+
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~  209 (275)
T PRK06940        144 ATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQD  209 (275)
T ss_pred             cccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchh
Confidence                               02467899999999999999999999999999999999999998753

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=3.7e-31  Score=219.96  Aligned_cols=191  Identities=25%  Similarity=0.338  Sum_probs=162.8

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeC-ChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++|+++||||++|||.++|++|+++|++|++..+ +++..++..+++.+.  +.++..+.+|+++.  +++.++++.+.
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE--GHDVYAVQADVSKVEDANRLVEEAVNH   81 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            45899999999999999999999999999987654 556666666666543  34688899999973  46666777776


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++  ++|++|||||....  ..+.+.+.+++++.+++|+.+++.+++.++|.|.+++.+++|++||..+..  +.++...
T Consensus        82 ~~--~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~  155 (247)
T PRK12935         82 FG--KVDILVNNAGITRD--RTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQA--GGFGQTN  155 (247)
T ss_pred             cC--CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcC--CCCCCcc
Confidence            66  46699999998754  456788889999999999999999999999999887789999999998877  5677899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |++||+|+++++++++.|+.+.|++++.++||+++|++....
T Consensus       156 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~  197 (247)
T PRK12935        156 YSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEV  197 (247)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhc
Confidence            999999999999999999998999999999999999986654

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=3.9e-31  Score=220.07  Aligned_cols=191  Identities=31%  Similarity=0.401  Sum_probs=165.1

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      +++|+++||||+++||.+++++|+++|++|++++|+.+..++..+++.+.  +.++..+.+|+++.  +++.++.+.+.+
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~   78 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK--GGNAQAFACDITDRDSVDTAVAAAEQAL   78 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999999999999999998888777777654  34578889999873  455556666655


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      +  ++|++|||||....  .++.+.+.+++++.+++|+.+++.+++.++|.|.+++.+++|++||..+..  +.+....|
T Consensus        79 ~--~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~--~~~~~~~Y  152 (250)
T TIGR03206        79 G--PVDVLVNNAGWDKF--GPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARV--GSSGEAVY  152 (250)
T ss_pred             C--CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhcc--CCCCCchH
Confidence            5  46699999998643  456778889999999999999999999999999888789999999998887  66788999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      +++|+|+++++++++.|+.+.|++++.++||++.|++.+..
T Consensus       153 ~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~  193 (250)
T TIGR03206       153 AACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDI  193 (250)
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhh
Confidence            99999999999999999988899999999999999987654

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-31  Score=225.08  Aligned_cols=191  Identities=24%  Similarity=0.340  Sum_probs=160.0

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh-hHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD-KLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK  125 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~  125 (255)
                      .+++||+++||||++|||.+++++|+++|++|++++|+.+ ..++..+.+...  +.++.++.+|+++.  +++.++++.
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~i~  119 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKE--GVKCLLIPGDVSDEAFCKDAVEETV  119 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999864 344444444432  34678899999873  455666666


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCc
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~  205 (255)
                      +.+++  +|++|||||.... ..++.+.+.++|++.+++|+.+++.++++++|.|.+  .|++|++||..+..  +.+..
T Consensus       120 ~~~~~--iD~lI~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--~g~iV~isS~~~~~--~~~~~  192 (290)
T PRK06701        120 RELGR--LDILVNNAAFQYP-QQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--GSAIINTGSITGYE--GNETL  192 (290)
T ss_pred             HHcCC--CCEEEECCcccCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--CCeEEEEecccccC--CCCCc
Confidence            66664  5699999998643 245778899999999999999999999999998843  48999999998887  66778


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ..|++||+|+++++++++.|+.++||+|++|+||++.|++.++
T Consensus       193 ~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~  235 (290)
T PRK06701        193 IDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPS  235 (290)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccc
Confidence            8999999999999999999999999999999999999998754

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-31  Score=220.72  Aligned_cols=193  Identities=24%  Similarity=0.303  Sum_probs=161.7

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      +++|+++||||++|||.++|++|+++|++|++++|+.+++++..+++.+.  +.++..+.+|++|.  +++.++++.+.+
T Consensus        10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~Dl~d~~~i~~~~~~~~~~~   87 (259)
T PRK08213         10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL--GIDALWIAADVADEADIERLAEETLERF   87 (259)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            56999999999999999999999999999999999998888777777653  34567889999974  455556666665


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhh-hhhCCCcEEEEECCccccccCC--CCCc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPG-MLKRKKGAIVNIGSGAAIVIPS--DPLY  205 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~-~~~~~~g~iv~vsS~~~~~~~~--~~~~  205 (255)
                      +  ++|++|||||....  .+..+.+.+.|++.+++|+.+++.+++++.|. |.+++.+++|++||..+....+  .++.
T Consensus        88 ~--~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~  163 (259)
T PRK08213         88 G--HVDILVNNAGATWG--APAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDT  163 (259)
T ss_pred             C--CCCEEEECCCCCCC--CChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCc
Confidence            5  46699999998643  44667889999999999999999999999998 7666678999999987765211  1234


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ..|+++|++++++++++++|+.++|++++.++||++.|++..++
T Consensus       164 ~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~  207 (259)
T PRK08213        164 IAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGT  207 (259)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhh
Confidence            88999999999999999999999999999999999999986543

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=2.4e-31  Score=223.91  Aligned_cols=184  Identities=21%  Similarity=0.208  Sum_probs=146.8

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeC-ChhhHHHHHHHHHhhcCCceEEEEEEECCCCc------HHHHHHHHH
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDL------DEGVERIKE  126 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~~~~~~  126 (255)
                      ++++||||++|||++++++|+++|++|++++| +++.+++..+++.+.. ..+...+.+|++|..      ++.++.+.+
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~   80 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARR-PNSAVTCQADLSNSATLFSRCEAIIDACFR   80 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhcc-CCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence            68999999999999999999999999999865 5667777777775433 234667899999842      223333344


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCH-----------HHHHhHhHHhhhHHHHHHHHHhhhhhhC------CCcEEE
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQ-----------VLLKNLIKVNVEGTTKVTQAVLPGMLKR------KKGAIV  189 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~-----------~~~~~~~~~N~~~~~~l~~~~lp~~~~~------~~g~iv  189 (255)
                      .++  .+|+||||||...+  .++.+.+.           ++|++++++|+.+++.+++.++|.|+++      ..++|+
T Consensus        81 ~~g--~iD~lv~nAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv  156 (267)
T TIGR02685        81 AFG--RCDVLVNNASAFYP--TPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIV  156 (267)
T ss_pred             ccC--CceEEEECCccCCC--CcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEE
Confidence            444  46799999998643  23333332           3588999999999999999999998643      246899


Q ss_pred             EECCccccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          190 NIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       190 ~vsS~~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                      +++|..+..  +.++..+|++||+|+++|+++|+.|+.++||+|++|+||++.||
T Consensus       157 ~~~s~~~~~--~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~  209 (267)
T TIGR02685       157 NLCDAMTDQ--PLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLP  209 (267)
T ss_pred             EehhhhccC--CCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCc
Confidence            999988876  67888999999999999999999999999999999999999765

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=3.5e-31  Score=219.09  Aligned_cols=187  Identities=23%  Similarity=0.275  Sum_probs=156.6

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCC-hhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcCCC
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGLD  132 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~~  132 (255)
                      ++||||++|||+++|++|+++|++|++++|. .+..++..+++++.  ..++..+.+|+++.  +++.++++.+.+++  
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~--   76 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ--GGNARLLQFDVADRVACRTLLEADIAEHGA--   76 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHHHHcCC--
Confidence            5899999999999999999999999998865 45566666666654  34678899999874  35555666665654  


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHh-hhhhhCCCcEEEEECCccccccCCCCCchhchHH
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVL-PGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAAT  211 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~l-p~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~as  211 (255)
                      +|++|||||....  .++.+.+.++|++++++|+.+++++++.++ |.+.+++.|+||++||..+..  +.++...|+++
T Consensus        77 i~~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~--~~~~~~~Y~~s  152 (239)
T TIGR01831        77 YYGVVLNAGITRD--AAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVM--GNRGQVNYSAA  152 (239)
T ss_pred             CCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhcc--CCCCCcchHHH
Confidence            5699999998654  456778999999999999999999999875 555556678999999998888  67888999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          212 KAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       212 K~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      |+|+.+++++++.|+.++||+|++++||+++|++.++..
T Consensus       153 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  191 (239)
T TIGR01831       153 KAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVE  191 (239)
T ss_pred             HHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhh
Confidence            999999999999999999999999999999999987543

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.98  E-value=5.8e-31  Score=219.08  Aligned_cols=189  Identities=27%  Similarity=0.289  Sum_probs=161.1

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      +++|+++||||++|||++++++|+++|++|++++|+++..++..+++.+.  ......+.+|+++.  +++.++++.+.+
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (250)
T PRK07774          4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD--GGTAIAVQVDVSDPDSAKAMADATVSAF   81 (250)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999988777777776543  23567788999974  456667777777


Q ss_pred             cCCCccEEEEecCCCCC-cccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          129 EGLDVGVLINNVGISYP-YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +.  +|++|||||.... ...++.+.+.+++++.+++|+.+++.++++++|.|.+++.|+||++||..++.     +...
T Consensus        82 ~~--id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-----~~~~  154 (250)
T PRK07774         82 GG--IDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL-----YSNF  154 (250)
T ss_pred             CC--CCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC-----Cccc
Confidence            64  6699999998642 22456778889999999999999999999999999887789999999987654     2468


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      |++||+|++++++++++|+.+.||++++++||.+.|++.+.
T Consensus       155 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~  195 (250)
T PRK07774        155 YGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRT  195 (250)
T ss_pred             cHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccc
Confidence            99999999999999999999899999999999999998754

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=6.5e-31  Score=217.56  Aligned_cols=191  Identities=34%  Similarity=0.461  Sum_probs=165.2

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      +++++++||||++|||++++++|+++|++|++++|+.++.++..+++...  +.++..+.+|+++.  +++.++.+.+.+
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY--GVKVVIATADVSDYEEVTAAIEQLKNEL   82 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999999999999999998888777777543  34688889999873  455556666655


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      +  ++|++|||||....  ..+.+.+.+++++.+++|+.+++.+++.+.|.|.+++.+++|++||..+..  +.++...|
T Consensus        83 ~--~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~--~~~~~~~Y  156 (239)
T PRK07666         83 G--SIDILINNAGISKF--GKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQK--GAAVTSAY  156 (239)
T ss_pred             C--CccEEEEcCccccC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhcc--CCCCCcch
Confidence            5  46699999998643  456678899999999999999999999999999888889999999998887  66778899


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ++||+|+..++++++.|+.+.|+++++++||.+.|++....
T Consensus       157 ~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~  197 (239)
T PRK07666        157 SASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL  197 (239)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc
Confidence            99999999999999999999999999999999999986643

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.98  E-value=4e-31  Score=219.18  Aligned_cols=180  Identities=26%  Similarity=0.336  Sum_probs=149.5

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      ++++||||++|||++++++|+++|++|++++|+++.+++..++      ..++..+.+|++|.  +.++++.+.... .+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~D~~~~--~~~~~~~~~~~~-~~   72 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ------SANIFTLAFDVTDH--PGTKAALSQLPF-IP   72 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh------cCCCeEEEeeCCCH--HHHHHHHHhccc-CC
Confidence            6899999999999999999999999999999998776554332      23467889999974  344444443332 46


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHHHH
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKA  213 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~asK~  213 (255)
                      |++|||||....  ....+.+.++|++++++|+.+++++++.++|+|.+  ++++|++||..+..  +.+....|++||+
T Consensus        73 d~~i~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~--~~~~~~~Y~asK~  146 (240)
T PRK06101         73 ELWIFNAGDCEY--MDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC--GHRVVIVGSIASEL--ALPRAEAYGASKA  146 (240)
T ss_pred             CEEEEcCccccc--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCeEEEEechhhcc--CCCCCchhhHHHH
Confidence            799999997532  22446788999999999999999999999998843  47899999988887  6778899999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          214 YIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       214 al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++++|+++++.|+.++||++++++||++.|++.+.
T Consensus       147 a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~  181 (240)
T PRK06101        147 AVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDK  181 (240)
T ss_pred             HHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCC
Confidence            99999999999999999999999999999998764

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.98  E-value=3.6e-31  Score=248.81  Aligned_cols=191  Identities=28%  Similarity=0.375  Sum_probs=164.9

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||++++++|+++|++|++++|+++.+++..+++.+.  +.++..+.+|++|.  +++.++++.+.
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~  445 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK--GGTAHAYTCDLTDSAAVDHTVKDILAE  445 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence            356899999999999999999999999999999999999988888887654  34678889999973  45666777776


Q ss_pred             hcCCCccEEEEecCCCCCcccccccC--CHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCc
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEV--DQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~--~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~  205 (255)
                      +++  +|++|||||....  ..+.+.  +.+++++++++|+.+++.+++.++|.|++++.|+||++||.++..  +.+..
T Consensus       446 ~g~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~  519 (657)
T PRK07201        446 HGH--VDYLVNNAGRSIR--RSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQT--NAPRF  519 (657)
T ss_pred             cCC--CCEEEECCCCCCC--CChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcC--CCCCc
Confidence            664  5699999998643  222222  357899999999999999999999999888889999999998887  66888


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ..|++||+|+++|+++++.|+.++||+|++|+||+++|+|.+.
T Consensus       520 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~  562 (657)
T PRK07201        520 SAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAP  562 (657)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCc
Confidence            9999999999999999999999999999999999999999764

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.98  E-value=2.4e-31  Score=209.55  Aligned_cols=193  Identities=24%  Similarity=0.318  Sum_probs=153.9

Q ss_pred             cEEEEECCCCchHHHHHHHHHHc-CCcE-EEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHhc
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKT-GLNL-VLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAIE  129 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~-G~~V-~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~  129 (255)
                      |.++||||++|||..++++|.+. |-.+ +.++|++++..+..+....  .+.+++++++|+++  +++++++++.+..+
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~--~d~rvHii~Ldvt~deS~~~~~~~V~~iVg   81 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSK--SDSRVHIIQLDVTCDESIDNFVQEVEKIVG   81 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhc--cCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence            45999999999999999999865 5554 4566777775222222111  25678999999986  45778888888877


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-----------CcEEEEECCccccc
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-----------KGAIVNIGSGAAIV  198 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-----------~g~iv~vsS~~~~~  198 (255)
                      ...+|+|+||||+..++. ...+.+.+.|.+++++|..|++.++|+++|.+++..           ++.|||+||..+..
T Consensus        82 ~~GlnlLinNaGi~~~y~-~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~  160 (249)
T KOG1611|consen   82 SDGLNLLINNAGIALSYN-TVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSI  160 (249)
T ss_pred             cCCceEEEeccceeeecc-cccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccccc
Confidence            767889999999987643 355667888999999999999999999999887643           24799999877654


Q ss_pred             cC-CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          199 IP-SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       199 ~~-~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .. ......+|.+||+|+++|+|+++.|+++.+|-|..+|||||+|+|...-
T Consensus       161 ~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~  212 (249)
T KOG1611|consen  161 GGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKK  212 (249)
T ss_pred             CCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCC
Confidence            22 2345789999999999999999999999999999999999999997643

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.98  E-value=5.3e-31  Score=220.54  Aligned_cols=187  Identities=20%  Similarity=0.255  Sum_probs=150.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCC----hhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN----PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVER  123 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~  123 (255)
                      .+++|+++||||++|||+++|++|+++|++|++++++    .+..++..+++...  +.++..+.+|+++.  +++.+++
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~   82 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA--GAKAVAFQADLTTAAAVEKLFDD   82 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh--CCcEEEEecCcCCHHHHHHHHHH
Confidence            3568999999999999999999999999997776643    23444555555443  34677889999873  4556666


Q ss_pred             HHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEE-CCccccccCCC
Q 025260          124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNI-GSGAAIVIPSD  202 (255)
Q Consensus       124 ~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~v-sS~~~~~~~~~  202 (255)
                      +.+.++  ++|++|||||....  .++.+.+.+++++++++|+.+++.++++++|.|.+  .|+++++ ||..+.   +.
T Consensus        83 ~~~~~~--~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~~iv~~~ss~~~~---~~  153 (257)
T PRK12744         83 AKAAFG--RPDIAINTVGKVLK--KPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND--NGKIVTLVTSLLGA---FT  153 (257)
T ss_pred             HHHhhC--CCCEEEECCcccCC--CCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc--CCCEEEEecchhcc---cC
Confidence            666666  46699999998654  45778899999999999999999999999998854  3677776 454443   34


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      +....|++||+|+++|+++++.|+.+.||+|++++||++.|++..
T Consensus       154 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~  198 (257)
T PRK12744        154 PFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFY  198 (257)
T ss_pred             CCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhc
Confidence            667899999999999999999999999999999999999999764

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=2.5e-31  Score=219.46  Aligned_cols=177  Identities=25%  Similarity=0.286  Sum_probs=152.7

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      +++|+++||||++|||.+++++|+++|++|++++|+.....           ..++..+.+|+++.    ++++.+.+++
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~-----------~~~~~~~~~D~~~~----~~~~~~~~~~   67 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL-----------SGNFHFLQLDLSDD----LEPLFDWVPS   67 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc-----------CCcEEEEECChHHH----HHHHHHhhCC
Confidence            56899999999999999999999999999999999854311           23467888888764    5556666664


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchH
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA  210 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~a  210 (255)
                        +|++|||||.... ..++.+.+.+++++.+++|+.+++.++++++|.|++++.|+||++||..+..  +.++...|++
T Consensus        68 --id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~Y~~  142 (235)
T PRK06550         68 --VDILCNTAGILDD-YKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFV--AGGGGAAYTA  142 (235)
T ss_pred             --CCEEEECCCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcc--CCCCCcccHH
Confidence              5699999997532 2346788899999999999999999999999999888889999999998887  6678899999


Q ss_pred             HHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          211 TKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       211 sK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      +|+++++++++++.|+.++||+|++++||+++|++..
T Consensus       143 sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~  179 (235)
T PRK06550        143 SKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTA  179 (235)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccc
Confidence            9999999999999999999999999999999999864

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.98  E-value=7.3e-31  Score=217.77  Aligned_cols=187  Identities=22%  Similarity=0.276  Sum_probs=158.9

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh-hhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      .+++|+++||||++|||+++|++|+++|++|+++.|+. +..++..+++.+.  +.++..+.+|+++  ++++.++++.+
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA--GGRAIAVQADVADAAAVTRLFDAAET   79 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            35689999999999999999999999999998887754 4455566666543  4567888999987  34666677777


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .+++  +|++|||||....  .++.+.+.+++++++++|+.+++.++++++|.|.+  .|+||++||..+..  +.|...
T Consensus        80 ~~~~--id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~--~~~~~~  151 (245)
T PRK12937         80 AFGR--IDVLVNNAGVMPL--GTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTSVIAL--PLPGYG  151 (245)
T ss_pred             HcCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeeccccC--CCCCCc
Confidence            7764  5699999998643  55778899999999999999999999999998853  58999999988877  678889


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                      .|+++|++++.++++++.|+.+.|+++++++||+++|+|.
T Consensus       152 ~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~  191 (245)
T PRK12937        152 PYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELF  191 (245)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchh
Confidence            9999999999999999999999999999999999999985

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.98  E-value=7.2e-31  Score=219.91  Aligned_cols=190  Identities=24%  Similarity=0.358  Sum_probs=164.1

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      +++|+++||||+++||++++++|+++|++|++++|++++.++..+++++.  +.++..+.+|+++.  +++.++++.+.+
T Consensus         5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (262)
T PRK13394          5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA--GGKAIGVAMDVTNEDAVNAGIDKVAERF   82 (262)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc--CceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999999999999999998888888887654  34677889999874  355566666665


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhh-hhCCCcEEEEECCccccccCCCCCchh
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGM-LKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~-~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +  ++|++|||||....  .+..+.+.+++++.+++|+.+++.+++.++|.| .+++.++||++||..+..  +.+....
T Consensus        83 ~--~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~--~~~~~~~  156 (262)
T PRK13394         83 G--SVDILVSNAGIQIV--NPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHE--ASPLKSA  156 (262)
T ss_pred             C--CCCEEEECCccCCC--CchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcC--CCCCCcc
Confidence            5  46699999998643  456677889999999999999999999999999 666678999999988776  5677789


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      |++||+++.++++.++.|+.+.||++++++||++.||+...
T Consensus       157 y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~  197 (262)
T PRK13394        157 YVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDK  197 (262)
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhh
Confidence            99999999999999999999899999999999999997643

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.98  E-value=7.5e-31  Score=217.60  Aligned_cols=188  Identities=27%  Similarity=0.390  Sum_probs=160.8

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      +++++++||||++|||++++++|+++|+.|++.+|+.+++++..+++     +.++..+.+|+++.  +++.++++.+.+
T Consensus         4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (245)
T PRK12936          4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-----GERVKIFPANLSDRDEVKALGQKAEADL   78 (245)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999999999999999988777655443     23567788999873  455556666666


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++  +|++|||||...+  .++.+.+.+++++.+++|+.+++.+++++.|.+.+++.+++|++||..+..  +.+....|
T Consensus        79 ~~--id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~Y  152 (245)
T PRK12936         79 EG--VDILVNNAGITKD--GLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVT--GNPGQANY  152 (245)
T ss_pred             CC--CCEEEECCCCCCC--CccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCc--CCCCCcch
Confidence            64  6699999998654  456778889999999999999999999999988877789999999988887  66788899


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      +++|+|+.++++.++.|+.+.|+++++++||+++|++.+..
T Consensus       153 ~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~  193 (245)
T PRK12936        153 CASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKL  193 (245)
T ss_pred             HHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhccc
Confidence            99999999999999999999999999999999999987653

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.98  E-value=7e-31  Score=219.40  Aligned_cols=189  Identities=24%  Similarity=0.340  Sum_probs=165.8

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhc
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE  129 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~  129 (255)
                      ++|+++||||+++||++++++|+++|++|++++|+.++.++..+++.+.  +.++..+.+|+++.  +++.++.+.+.++
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   80 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA--GGKAIGVAMDVTDEEAINAGIDYAVETFG   80 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999999999999888887777653  45678889999974  3555666666655


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhch
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA  209 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~  209 (255)
                        ++|++|||||....  ....+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..  +.++...|+
T Consensus        81 --~~d~vi~~a~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~--~~~~~~~y~  154 (258)
T PRK12429         81 --GVDILVNNAGIQHV--APIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLV--GSAGKAAYV  154 (258)
T ss_pred             --CCCEEEECCCCCCC--CChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhcc--CCCCcchhH
Confidence              46699999998654  456788889999999999999999999999999988889999999998887  778899999


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++|+++.++++.++.|+.+.||++++++||++.||+...
T Consensus       155 ~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~  193 (258)
T PRK12429        155 SAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRK  193 (258)
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhh
Confidence            999999999999999999999999999999999988643

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.98  E-value=8.8e-31  Score=221.40  Aligned_cols=185  Identities=22%  Similarity=0.300  Sum_probs=157.6

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~  130 (255)
                      .|+++||||+||||++++++|+++|++|++++|+++.+++..++.     ...+..+.+|++|.  +++.++++.+.++ 
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   75 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY-----GDRLWVLQLDVTDSAAVRAVVDRAFAALG-   75 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCceEEEEccCCCHHHHHHHHHHHHHHcC-
Confidence            478999999999999999999999999999999987666544432     23577889999974  3445555555555 


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchH
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA  210 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~a  210 (255)
                       ++|++|||||....  .+..+.+.+++++.+++|+.++++++++++|.|++++.++||++||..+..  +.|+...|++
T Consensus        76 -~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~Y~~  150 (276)
T PRK06482         76 -RIDVVVSNAGYGLF--GAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQI--AYPGFSLYHA  150 (276)
T ss_pred             -CCCEEEECCCCCCC--cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCccccc--CCCCCchhHH
Confidence             46699999998754  456778889999999999999999999999999888889999999988776  6678899999


Q ss_pred             HHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          211 TKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       211 sK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ||+++++|+++++.|+.++|++++.++||.+.|++.+.
T Consensus       151 sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~  188 (276)
T PRK06482        151 TKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAG  188 (276)
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCccc
Confidence            99999999999999999999999999999999988654

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.98  E-value=9.3e-31  Score=218.09  Aligned_cols=189  Identities=30%  Similarity=0.384  Sum_probs=155.8

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhh--HHHHHHHHHhhcCC-ceEEEEEEECCC-C--cHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK--LKDVSDSIQAKYAK-TQIKSVVVDFSG-D--LDEGVERI  124 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~--~~~~~~~~~~~~~~-~~~~~~~~d~~~-~--~~~~~~~~  124 (255)
                      .++|+++||||++|||+++|++|+++|++|++..|+.+.  .++..+...  ... .......+|+++ .  ++..++.+
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dvs~~~~~v~~~~~~~   80 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK--EAGGGRAAAVAADVSDDEESVEALVAAA   80 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH--hcCCCcEEEEEecCCCCHHHHHHHHHHH
Confidence            458999999999999999999999999999988888664  333333333  112 367788899986 3  35667777


Q ss_pred             HHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                      .+.+++  +|++|||||+.... .++.+.+.++|++.+++|+.+++.+++.+.|.++++   +||++||..+. ..  ++
T Consensus        81 ~~~~g~--id~lvnnAg~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~--~~  151 (251)
T COG1028          81 EEEFGR--IDILVNNAGIAGPD-APLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GG--PP  151 (251)
T ss_pred             HHHcCC--CCEEEECCCCCCCC-CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CC--CC
Confidence            777776  55999999997531 357889999999999999999999999888888733   99999999887 33  33


Q ss_pred             -chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          205 -YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       205 -~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                       +.+|++||+|+.+|+++++.|+.+.||+|++|+||+++|++.....
T Consensus       152 ~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~  198 (251)
T COG1028         152 GQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALE  198 (251)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhh
Confidence             5899999999999999999999999999999999999999987644

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.98  E-value=1.7e-30  Score=216.40  Aligned_cols=183  Identities=27%  Similarity=0.417  Sum_probs=155.4

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcCC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGL  131 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~  131 (255)
                      ++++||||++|||.+++++|+++|++|++++|+++++++..+++     +.++..+.+|+++.  +++.++++.+.++  
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~--   73 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWR--   73 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----ccceEEEEecCCCHHHHHHHHHHHHHHcC--
Confidence            46899999999999999999999999999999988776655543     23577889999874  3455566666555  


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHH
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAAT  211 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~as  211 (255)
                      ++|++|||||.... ..++.+.+.+++++++++|+.+++.+++.++|.|.+++.+++|++||..+..  +.++...|++|
T Consensus        74 ~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~~Y~~s  150 (248)
T PRK10538         74 NIDVLVNNAGLALG-LEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW--PYAGGNVYGAT  150 (248)
T ss_pred             CCCEEEECCCccCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC--CCCCCchhHHH
Confidence            46699999997532 2346678999999999999999999999999999888789999999998876  66778899999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          212 KAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       212 K~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                      |+++++|++.++.|+.+.||++++++||++.|++.
T Consensus       151 K~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~  185 (248)
T PRK10538        151 KAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEF  185 (248)
T ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeCCeeccccc
Confidence            99999999999999999999999999999985543

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.98  E-value=1.3e-30  Score=216.86  Aligned_cols=188  Identities=23%  Similarity=0.317  Sum_probs=155.8

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEe-CChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhc
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE  129 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~  129 (255)
                      .|+++||||++|||.+++++|+++|++|+++. |+++.+++..+++.+.  ..++..+.+|+++.  +++.++++.+.++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA--GGRACVVAGDVANEADVIAMFDAVQSAFG   79 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            37899999999999999999999999998764 6767777776666543  34678899999874  4555566666555


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC---CcEEEEECCccccccCCCC-Cc
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK---KGAIVNIGSGAAIVIPSDP-LY  205 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~---~g~iv~vsS~~~~~~~~~~-~~  205 (255)
                        ++|++|||||...+ ..++.+.+.+++++.+++|+.+++.+++.++|.|..++   .|++|++||..+..  +.+ .+
T Consensus        80 --~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~--~~~~~~  154 (248)
T PRK06947         80 --RLDALVNNAGIVAP-SMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRL--GSPNEY  154 (248)
T ss_pred             --CCCEEEECCccCCC-CCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcC--CCCCCC
Confidence              46699999998643 23467888999999999999999999999999886554   57899999988876  334 35


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      ..|++||+++++|+++++.|+.+.|++|+.++||+++|++.+
T Consensus       155 ~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~  196 (248)
T PRK06947        155 VDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHA  196 (248)
T ss_pred             cccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccccc
Confidence            689999999999999999999999999999999999999864

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.7e-30  Score=219.66  Aligned_cols=190  Identities=25%  Similarity=0.385  Sum_probs=161.9

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +.++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+  .++..+.+|+++.  +++.++++.+.
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADG--GEAVAFPLDVTDPDSVKSFVAQAEEA   84 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            3557999999999999999999999999999999999887777766665542  3577888999974  34555566555


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++  ++|++|||||....  ....+.+.+++++.+++|+.+++++++.++|.|++++.|+||++||..+..  +.+....
T Consensus        85 ~~--~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~--~~~~~~~  158 (274)
T PRK07775         85 LG--EIEVLVSGAGDTYF--GKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALR--QRPHMGA  158 (274)
T ss_pred             cC--CCCEEEECCCcCCC--cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcC--CCCCcch
Confidence            55  46699999998643  456678889999999999999999999999999887789999999988877  6677889


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      |++||++++++++++++|+.+.||++++++||++.|++..
T Consensus       159 Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~  198 (274)
T PRK07775        159 YGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGW  198 (274)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccc
Confidence            9999999999999999999888999999999999998654

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.98  E-value=9.1e-31  Score=218.16  Aligned_cols=184  Identities=22%  Similarity=0.282  Sum_probs=158.4

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      +++++|+++||||++|||.+++++|+++|++|++++|+.         ....  +..+..+.+|+++.  +++.++++.+
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   72 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQE--DYPFATFVLDVSDAAAVAQVCQRLLA   72 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhc--CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            456799999999999999999999999999999999986         1111  34578889999874  4556666666


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .+++  +|++|||||....  .++.+.+.+++++.+++|+.+++.+++.++|.|++++.|+||++||..+..  +.++..
T Consensus        73 ~~~~--id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~--~~~~~~  146 (252)
T PRK08220         73 ETGP--LDVLVNAAGILRM--GATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHV--PRIGMA  146 (252)
T ss_pred             HcCC--CCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhcc--CCCCCc
Confidence            6664  5699999998643  457788999999999999999999999999999888889999999988877  667789


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .|++||+++++|++++++|+.++||+|++++||++.|++...+
T Consensus       147 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~  189 (252)
T PRK08220        147 AYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTL  189 (252)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhh
Confidence            9999999999999999999999999999999999999986543

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.98  E-value=1.4e-30  Score=216.66  Aligned_cols=193  Identities=25%  Similarity=0.315  Sum_probs=163.3

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC----CcHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG----DLDEGVERIK  125 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~  125 (255)
                      .+++|+++||||++|||.+++++|+++|++|++++|+.+++++..+++.+.. ..+..++.+|+.+    ++++.++.+.
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAG-GPQPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcC-CCCceEEEecccCCCHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999999988888777776543 2345555666643    3455566666


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCc
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~  205 (255)
                      +.++  ++|++|||||.... ..++.+.+.+++++.+++|+.+++.++++++|.|.+++.++||++||..+..  +.+..
T Consensus        88 ~~~~--~id~vi~~Ag~~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~--~~~~~  162 (247)
T PRK08945         88 EQFG--RLDGVLHNAGLLGE-LGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQ--GRANW  162 (247)
T ss_pred             HHhC--CCCEEEECCcccCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcC--CCCCC
Confidence            6666  46699999998643 2346678889999999999999999999999999888889999999998887  66788


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      .+|++||+|++++++.++.|+...|+++++++||+++|++.+.
T Consensus       163 ~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~  205 (247)
T PRK08945        163 GAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRAS  205 (247)
T ss_pred             cccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhh
Confidence            9999999999999999999999999999999999999997543

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.98  E-value=1.2e-30  Score=225.50  Aligned_cols=193  Identities=16%  Similarity=0.123  Sum_probs=154.3

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      .++|+++||||++|||.+++++|+++|++|++++|+.+++++..+++...  +.++..+.+|+++.  ++++++++.+..
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (322)
T PRK07453          4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIP--PDSYTIIHIDLGDLDSVRRFVDDFRALG   81 (322)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcc--CCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            35899999999999999999999999999999999999888887777532  34678889999873  345555544433


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCC--cEEEEECCcccccc-------
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK--GAIVNIGSGAAIVI-------  199 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~--g~iv~vsS~~~~~~-------  199 (255)
                      +  ++|+||||||+..+. ....+.+.++++.++++|+.|++.+++.++|.|++++.  +|||++||..+...       
T Consensus        82 ~--~iD~li~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~  158 (322)
T PRK07453         82 K--PLDALVCNAAVYMPL-LKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIP  158 (322)
T ss_pred             C--CccEEEECCcccCCC-CCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccC
Confidence            3  477999999986431 22346688999999999999999999999999987653  69999999765320       


Q ss_pred             --------------------------CCCCCchhchHHHHHHHHHHHHHHHHHc-cCCceEEEeeeeee-eeCCcch
Q 025260          200 --------------------------PSDPLYSVYAATKAYIDQFSRSLYVEYR-KSGIDVQCQVLFLL-CFYNLND  248 (255)
Q Consensus       200 --------------------------~~~~~~~~Y~asK~al~~~~~~l~~e~~-~~gi~v~~v~Pg~v-~T~~~~~  248 (255)
                                                .+..+..+|+.||.|...+++.+++++. ..||+|++++||.| .|++.++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~  235 (322)
T PRK07453        159 IPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRN  235 (322)
T ss_pred             CCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCccccc
Confidence                                      0012346899999999999999999994 46999999999999 5888654

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.1e-30  Score=215.45  Aligned_cols=188  Identities=27%  Similarity=0.328  Sum_probs=155.4

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEe-CChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhc
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE  129 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~  129 (255)
                      +|+++||||++|||.+++++|+++|++|++.. |+++..++..+++.+.  +..+..+.+|++|.  +++.++++.+.++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ--GGEALAVAADVADEADVLRLFEAVDRELG   79 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC--CCcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            57899999999999999999999999998887 4555566665666543  34567889999874  4566666766666


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC---CcEEEEECCccccccCCCCC-c
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK---KGAIVNIGSGAAIVIPSDPL-Y  205 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~---~g~iv~vsS~~~~~~~~~~~-~  205 (255)
                      +  +|++|||||...+ ..++.+.+.++|++++++|+.+++.+++.++|.|.++.   +|+||++||.++..  +.+. .
T Consensus        80 ~--id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~~  154 (248)
T PRK06123         80 R--LDALVNNAGILEA-QMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARL--GSPGEY  154 (248)
T ss_pred             C--CCEEEECCCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcC--CCCCCc
Confidence            4  5699999998643 23467889999999999999999999999999997642   57899999998877  4454 3


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      ..|++||+++++|+++++.|+.+.||+|++++||.+.||+..
T Consensus       155 ~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~  196 (248)
T PRK06123        155 IDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHA  196 (248)
T ss_pred             cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhh
Confidence            679999999999999999999999999999999999999754

>PRK12742 oxidoreductase; Provisional

Probab=99.97  E-value=1.6e-30  Score=214.73  Aligned_cols=182  Identities=20%  Similarity=0.222  Sum_probs=147.2

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeC-ChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      +++|+++||||++|||+++|++|+++|++|++++| +++..++..++.     +  ...+.+|++|.  +.+.+..+.++
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-----~--~~~~~~D~~~~--~~~~~~~~~~~   74 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-----G--ATAVQTDSADR--DAVIDVVRKSG   74 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-----C--CeEEecCCCCH--HHHHHHHHHhC
Confidence            45899999999999999999999999999998876 444444433322     1  34677888864  33334444444


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhch
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA  209 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~  209 (255)
                        ++|++|||||....  ....+.+.++|++.+++|+.+++.+++.++|.|.  +.|++|++||..+... +.++...|+
T Consensus        75 --~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~g~iv~isS~~~~~~-~~~~~~~Y~  147 (237)
T PRK12742         75 --ALDILVVNAGIAVF--GDALELDADDIDRLFKINIHAPYHASVEAARQMP--EGGRIIIIGSVNGDRM-PVAGMAAYA  147 (237)
T ss_pred             --CCcEEEECCCCCCC--CCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHh--cCCeEEEEeccccccC-CCCCCcchH
Confidence              46799999998643  3466788999999999999999999999999885  3589999999887431 457788999


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++|+|+++++++++.|+.+.||+||+|+||+++|++.+.
T Consensus       148 ~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~  186 (237)
T PRK12742        148 ASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPA  186 (237)
T ss_pred             HhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccc
Confidence            999999999999999999999999999999999998653

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.2e-30  Score=216.24  Aligned_cols=191  Identities=22%  Similarity=0.318  Sum_probs=160.4

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEE-eCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++++++||||++|||.++|++|+++|++|++. .|+.+++++..+++.+.  +.++..+.+|++|.  +.+.++++.+.
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~~   81 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN--GGKAFLIEADLNSIDGVKKLVEQLKNE   81 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCcCCHHHHHHHHHHHHHH
Confidence            458999999999999999999999999999775 78887777776666543  34577889999873  45556666666


Q ss_pred             hc----CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC
Q 025260          128 IE----GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP  203 (255)
Q Consensus       128 ~~----~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~  203 (255)
                      ++    ..++|++|||||....  .++.+.+.+.|++.+++|+.+++++++.++|.|.+  .|++|++||..+..  +.+
T Consensus        82 ~~~~~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~v~~sS~~~~~--~~~  155 (254)
T PRK12746         82 LQIRVGTSEIDILVNNAGIGTQ--GTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA--EGRVINISSAEVRL--GFT  155 (254)
T ss_pred             hccccCCCCccEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECCHHhcC--CCC
Confidence            52    1357899999998644  55778899999999999999999999999998854  37999999988877  667


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      +...|++||+|+++++++++.|+.+.|++|++++||++.|++.+++
T Consensus       156 ~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~  201 (254)
T PRK12746        156 GSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKL  201 (254)
T ss_pred             CCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhh
Confidence            8899999999999999999999999999999999999999987543

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.7e-30  Score=215.89  Aligned_cols=184  Identities=23%  Similarity=0.321  Sum_probs=157.4

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      +|+++||||++|||++++++|+++|++|++++|+.+..++..+...+.  ...+..+.+|++|.     +.+.+.+.. +
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~-----~~~~~~~~~-~   73 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR--GLALRVEKLDLTDA-----IDRAQAAEW-D   73 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeeCCCH-----HHHHHHhcC-C
Confidence            578999999999999999999999999999999988777666655443  23577888999875     223333332 5


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHHH
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATK  212 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~asK  212 (255)
                      +|++|||||....  .+..+.+.+++++.+++|+.+++.+++.++|.+.+++.++||++||..+..  +.++...|++||
T Consensus        74 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~--~~~~~~~Y~~sK  149 (257)
T PRK09291         74 VDVLLNNAGIGEA--GAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLI--TGPFTGAYCASK  149 (257)
T ss_pred             CCEEEECCCcCCC--cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhcc--CCCCcchhHHHH
Confidence            7799999998754  567888999999999999999999999999999888789999999988877  557788999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          213 AYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       213 ~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++++++++.++.|+.+.||++++|+||++.|++.+.
T Consensus       150 ~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~  185 (257)
T PRK09291        150 HALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDT  185 (257)
T ss_pred             HHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhh
Confidence            999999999999999999999999999999988654

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-30  Score=214.22  Aligned_cols=185  Identities=18%  Similarity=0.257  Sum_probs=150.5

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      |+++||||++|||.+++++|+++|++|++++|+++..++.. +.      ..+....+|++|.  +.++++.+.+.+..+
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~------~~~~~~~~D~~d~--~~~~~~~~~~~~~~i   72 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-AL------PGVHIEKLDMNDP--ASLDQLLQRLQGQRF   72 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-hc------cccceEEcCCCCH--HHHHHHHHHhhcCCC
Confidence            68999999999999999999999999999999987655432 11      2355677888874  444455555544468


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc-CCCCCchhchHHH
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI-PSDPLYSVYAATK  212 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~-~~~~~~~~Y~asK  212 (255)
                      |++|||||+..+...++.+.+.+++++.+++|+.+++.+++.++|.|.+ +.++++++||..+... ++.+....|++||
T Consensus        73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK  151 (225)
T PRK08177         73 DLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRP-GQGVLAFMSSQLGSVELPDGGEMPLYKASK  151 (225)
T ss_pred             CEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhh-cCCEEEEEccCccccccCCCCCccchHHHH
Confidence            8999999987543345678899999999999999999999999998854 4589999999776542 1234567899999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          213 AYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       213 ~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++++.|+++++.|+.++||+|++++||+++|++.+.
T Consensus       152 ~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~  187 (225)
T PRK08177        152 AALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGD  187 (225)
T ss_pred             HHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCC
Confidence            999999999999999999999999999999999754

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=2.7e-30  Score=215.83  Aligned_cols=190  Identities=23%  Similarity=0.254  Sum_probs=159.2

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh-hhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhc
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE  129 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~  129 (255)
                      .|+++||||++|||.+++++|+++|++|++++|+. +..++..+++++.  ..++.++.+|+++.  +.++++++.+.++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL--GVEVIFFPADVADLSAHEAMLDAAQAAWG   79 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            47899999999999999999999999999999874 4445555555443  34678889999973  4556667776666


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC------CcEEEEECCccccccCCCC
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK------KGAIVNIGSGAAIVIPSDP  203 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~------~g~iv~vsS~~~~~~~~~~  203 (255)
                      +  +|++|||||...+...++.+.+.+++++.+++|+.+++.+++.+.|.|.+++      .+++|++||..+..  +.+
T Consensus        80 ~--id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~  155 (256)
T PRK12745         80 R--IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIM--VSP  155 (256)
T ss_pred             C--CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhcc--CCC
Confidence            4  6699999998654335577889999999999999999999999999998654      35799999998877  667


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ....|++||+++++++++++.|+.++|++|++++||.+.|++...
T Consensus       156 ~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~  200 (256)
T PRK12745        156 NRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAP  200 (256)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccc
Confidence            788999999999999999999999899999999999999998654

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.97  E-value=2.7e-30  Score=214.22  Aligned_cols=188  Identities=25%  Similarity=0.335  Sum_probs=157.8

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh-hHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD-KLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG  130 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~  130 (255)
                      |+++||||++|||.++|++|+++|++|++++|+.. ..++..++...  ...++..+.+|+++.  +++.++.+.+.+++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   80 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF--TEDQVRLKELDVTDTEECAEALAEIEEEEGP   80 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc--cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999854 22222222221  234678899999973  45566666666664


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchH
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA  210 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~a  210 (255)
                        +|++|||+|....  .++.+.+.++|++++++|+.+++++++.++|.|.+++.+++|++||..+..  +.++...|++
T Consensus        81 --id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~--~~~~~~~Y~~  154 (245)
T PRK12824         81 --VDILVNNAGITRD--SVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLK--GQFGQTNYSA  154 (245)
T ss_pred             --CCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhcc--CCCCChHHHH
Confidence              6699999998644  457788999999999999999999999999999887889999999998887  6788899999


Q ss_pred             HHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          211 TKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       211 sK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ||+|+++|+++++.|+.+.|+++++++||++.|++.+..
T Consensus       155 sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~  193 (245)
T PRK12824        155 AKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQM  193 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhc
Confidence            999999999999999999999999999999999987643

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.9e-30  Score=214.80  Aligned_cols=187  Identities=19%  Similarity=0.193  Sum_probs=156.3

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeC-ChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      ..+|+++||||++|||++++++|+++|++|++.++ +.+.+++..+++...  +.++..+.+|++|.  +++.++++.+.
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~~   84 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL--GRRAVALQADLADEAEVRALVARASAA   84 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45899999999999999999999999999988766 455566666666544  34577889999973  45556666666


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++  ++|++|||||....  .++.+.+.+++++++++|+.+++.+++++.|.|.++..|++|+++|..+..  +.|....
T Consensus        85 ~~--~iD~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~--~~p~~~~  158 (258)
T PRK09134         85 LG--PITLLVNNASLFEY--DSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWN--LNPDFLS  158 (258)
T ss_pred             cC--CCCEEEECCcCCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcC--CCCCchH
Confidence            65  46699999998654  457788999999999999999999999999999877789999999977766  5677789


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                      |++||+|++++++++++|+.+. |+|++++||++.|+..
T Consensus       159 Y~~sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~  196 (258)
T PRK09134        159 YTLSKAALWTATRTLAQALAPR-IRVNAIGPGPTLPSGR  196 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCC-cEEEEeecccccCCcc
Confidence            9999999999999999999765 9999999999998653

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.2e-30  Score=215.22  Aligned_cols=188  Identities=27%  Similarity=0.329  Sum_probs=162.1

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCc-EEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~-V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++|+++||||++|||++++++|+++|++ |++++|+.++.++..+++.+.  +..+..+.+|+++.  +++.++.+.+.
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL--GAKAVFVQADLSDVEDCRRVVAAADEA   81 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999998 999999988877777777543  44677888999873  45566666666


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCch
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      ++  ++|++|||||....  .++.+.+.+.+++++++|+.+++.+++.++|.|.+++ .|++|++||..+..  +.+...
T Consensus        82 ~g--~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~--~~~~~~  155 (260)
T PRK06198         82 FG--RLDALVNAAGLTDR--GTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHG--GQPFLA  155 (260)
T ss_pred             hC--CCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCccccc--CCCCcc
Confidence            66  46699999998643  4567889999999999999999999999999997654 58999999998877  667788


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                      .|+++|+++++|+++++.|+...||+|+.++||++.|++.
T Consensus       156 ~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~  195 (260)
T PRK06198        156 AYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGE  195 (260)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcch
Confidence            9999999999999999999999999999999999999874

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.97  E-value=5.2e-30  Score=212.14  Aligned_cols=188  Identities=26%  Similarity=0.287  Sum_probs=160.2

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeC-ChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG  130 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~  130 (255)
                      |+++||||++|||++++++|+++|++|++++| +++..++..+++...  ..++..+.+|+++.  +++.++.+.+.++ 
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   77 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL--GFDFRVVEGDVSSFESCKAAVAKVEAELG-   77 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHcC-
Confidence            68999999999999999999999999999988 666666655555433  34678889999874  3555666666665 


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchH
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA  210 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~a  210 (255)
                       ++|++|||||...+  .++.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..  +.++...|++
T Consensus        78 -~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~--~~~~~~~y~~  152 (242)
T TIGR01829        78 -PIDVLVNNAGITRD--ATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQK--GQFGQTNYSA  152 (242)
T ss_pred             -CCcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC--CCCCcchhHH
Confidence             46699999998654  457788999999999999999999999999999888889999999988877  6678899999


Q ss_pred             HHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          211 TKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       211 sK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      +|+++..|++++++|+.+.|++++++.||++.|++....
T Consensus       153 sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~  191 (242)
T TIGR01829       153 AKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAM  191 (242)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcccccc
Confidence            999999999999999999999999999999999987643

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.97  E-value=3.6e-30  Score=241.20  Aligned_cols=190  Identities=24%  Similarity=0.277  Sum_probs=164.9

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIK  125 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~  125 (255)
                      ...++||+++||||++|||+++|++|+++|++|++++|+.+.+++..+++.+..+...+..+.+|++|  ++++.++++.
T Consensus       409 ~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~  488 (676)
T TIGR02632       409 EKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVA  488 (676)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            34567999999999999999999999999999999999998888877777655444467789999997  3456667777


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCC
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~  204 (255)
                      +.+++  +|++|||||....  .++.+.+.++|+..+++|+.+++.+++.++|.|++++ .|+||++||..+..  +.++
T Consensus       489 ~~~g~--iDilV~nAG~~~~--~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~--~~~~  562 (676)
T TIGR02632       489 LAYGG--VDIVVNNAGIATS--SPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVY--AGKN  562 (676)
T ss_pred             HhcCC--CcEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcC--CCCC
Confidence            77765  5599999998643  5577888999999999999999999999999998765 57999999998887  6678


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeee
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCF  243 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T  243 (255)
                      ..+|++||+|+++++++++.|+.+.||+||+|+||.+.|
T Consensus       563 ~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~  601 (676)
T TIGR02632       563 ASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQ  601 (676)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceec
Confidence            899999999999999999999999999999999999964

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=7.2e-30  Score=212.56  Aligned_cols=192  Identities=22%  Similarity=0.289  Sum_probs=159.3

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      ++|++++||||++|||.+++++|+++|++|++++|+++++++..+++.+.  +.++..+.+|+++.  +++.++.+.+.+
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL--GTEVRGYAANVTDEEDVEATFAQIAEDF   80 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            56999999999999999999999999999999999998888887777654  34677889999873  344555555544


Q ss_pred             cCCCccEEEEecCCCCCcc------ccc-ccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECCccccccC
Q 025260          129 EGLDVGVLINNVGISYPYA------RFF-HEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIVIP  200 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~------~~~-~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS~~~~~~~  200 (255)
                      +  ++|++|||||......      .++ .+.+.++++.++++|+.+++.+.+.++|.|.++ .+++|+++||... .  
T Consensus        81 ~--~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~-~--  155 (253)
T PRK08217         81 G--QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIAR-A--  155 (253)
T ss_pred             C--CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccc-c--
Confidence            4  4669999999754211      112 567889999999999999999999999999876 4678999998754 3  


Q ss_pred             CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          201 SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       201 ~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      +.++...|++||+|+++++++|+.|+.++|+++++++||++.|++.++.
T Consensus       156 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~  204 (253)
T PRK08217        156 GNMGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAM  204 (253)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc
Confidence            4567889999999999999999999998999999999999999987653

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.97  E-value=2.5e-30  Score=202.48  Aligned_cols=161  Identities=29%  Similarity=0.454  Sum_probs=142.5

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCC--hhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN--PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~-~V~l~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      |+++||||++|||++++++|+++|+ +|++++|+  .+..++..+++...  +.++.++.+|+++.  +++.++++.+..
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP--GAKITFIECDLSDPESIRALIEEVIKRF   78 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT--TSEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc--cccccccccccccccccccccccccccc
Confidence            7899999999999999999999966 78999999  77788888888754  47889999999973  466677777666


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      +  ++|++|||||....  .++.+.+.++|++++++|+.+++.+.+.++|    +++|+||++||..+..  +.|+...|
T Consensus        79 ~--~ld~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~--~~~~~~~Y  148 (167)
T PF00106_consen   79 G--PLDILINNAGIFSD--GSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGVR--GSPGMSAY  148 (167)
T ss_dssp             S--SESEEEEECSCTTS--BSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGTS--SSTTBHHH
T ss_pred             c--cccccccccccccc--cccccccchhhhhccccccceeeeeeehhee----ccccceEEecchhhcc--CCCCChhH
Confidence            6  46699999999864  6788999999999999999999999999999    4589999999999998  78999999


Q ss_pred             hHHHHHHHHHHHHHHHHH
Q 025260          209 AATKAYIDQFSRSLYVEY  226 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~  226 (255)
                      ++||+|+++|+++|++|+
T Consensus       149 ~askaal~~~~~~la~e~  166 (167)
T PF00106_consen  149 SASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhc
Confidence            999999999999999997

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.9e-30  Score=216.18  Aligned_cols=187  Identities=20%  Similarity=0.307  Sum_probs=152.3

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh-hhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG  130 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~  130 (255)
                      |+++||||++|||+++|++|+++|++|++++|++ +.+++..    +.. ..++..+.+|+++.  +++.++++.+.++.
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~----~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA----EQY-NSNLTFHSLDLQDVHELETNFNEILSSIQE   76 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHH----hcc-CCceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence            6899999999999999999999999999999987 3333322    211 34577889999874  34555555555543


Q ss_pred             C--CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCchh
Q 025260          131 L--DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       131 ~--~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      .  +.+++|+|||...+ ..++.+.+.++|++.+++|+.+++.+++.++|.|++++ .++||++||..+..  +.+....
T Consensus        77 ~~~~~~~~v~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~  153 (251)
T PRK06924         77 DNVSSIHLINNAGMVAP-IKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKN--PYFGWSA  153 (251)
T ss_pred             ccCCceEEEEcceeccc-CcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcC--CCCCcHH
Confidence            2  33389999998643 24577889999999999999999999999999997753 57999999988876  6788899


Q ss_pred             chHHHHHHHHHHHHHHHHHc--cCCceEEEeeeeeeeeCCcch
Q 025260          208 YAATKAYIDQFSRSLYVEYR--KSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~--~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      |+++|+|+++|++.++.|+.  +.||+|++|.||+++|++.+.
T Consensus       154 Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~  196 (251)
T PRK06924        154 YCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQ  196 (251)
T ss_pred             HhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHH
Confidence            99999999999999999975  468999999999999998654

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.1e-30  Score=207.94  Aligned_cols=161  Identities=16%  Similarity=0.160  Sum_probs=140.3

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG  134 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id  134 (255)
                      +++||||++|||++++++|+++ ++|++.+|+..                   .+.+|++|.  +.++++.+.++  ++|
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~--~~~~~~~~~~~--~id   57 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDP--ASIRALFEKVG--KVD   57 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCCh--HHHHHHHHhcC--CCC
Confidence            6899999999999999999999 99999999743                   367899875  44455555555  466


Q ss_pred             EEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHHHHH
Q 025260          135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAY  214 (255)
Q Consensus       135 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~asK~a  214 (255)
                      ++|||||....  .++.+.+.++|++.+++|+.+++++++.++|.|.+  .|+|+++||..+..  +.++...|++||+|
T Consensus        58 ~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~iss~~~~~--~~~~~~~Y~~sK~a  131 (199)
T PRK07578         58 AVVSAAGKVHF--APLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND--GGSFTLTSGILSDE--PIPGGASAATVNGA  131 (199)
T ss_pred             EEEECCCCCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCeEEEEcccccCC--CCCCchHHHHHHHH
Confidence            99999998643  55778899999999999999999999999999864  48999999998877  67889999999999


Q ss_pred             HHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          215 IDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       215 l~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                      +++|+++++.|+ ++||+|++|+||+++|++.
T Consensus       132 ~~~~~~~la~e~-~~gi~v~~i~Pg~v~t~~~  162 (199)
T PRK07578        132 LEGFVKAAALEL-PRGIRINVVSPTVLTESLE  162 (199)
T ss_pred             HHHHHHHHHHHc-cCCeEEEEEcCCcccCchh
Confidence            999999999999 8899999999999999974

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=9.4e-30  Score=211.12  Aligned_cols=192  Identities=29%  Similarity=0.412  Sum_probs=165.9

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEE-eCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +.+|+++||||++|||.+++++|+++|++|+++ +|+.+..++..+++...  +.++..+.+|+++.  +++.++.+.+.
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE--GGDAIAVKADVSSEEDVENLVEQIVEK   80 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            568999999999999999999999999999999 99988887777776653  44678889999874  45556666666


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|++|||+|....  .+..+.+.+++++.+++|+.+++.+++.++|.+.+++.+++|++||..+..  +.+....
T Consensus        81 ~~~--id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~--~~~~~~~  154 (247)
T PRK05565         81 FGK--IDILVNNAGISNF--GLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLI--GASCEVL  154 (247)
T ss_pred             hCC--CCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhcc--CCCCccH
Confidence            664  6699999998733  456788999999999999999999999999999888889999999988877  6677889


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      |+++|++++.++++++.++...|+++++++||+++|++.+...
T Consensus       155 y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~  197 (247)
T PRK05565        155 YSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFS  197 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccC
Confidence            9999999999999999999989999999999999999876543

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.4e-29  Score=212.43  Aligned_cols=188  Identities=28%  Similarity=0.414  Sum_probs=160.8

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~  130 (255)
                      +++++||||++|||.+++++|+++|++|++++|++.+.++..+++...  +..+..+.+|++|.  +++.++.+.+.++ 
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-   77 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH--GGEALVVPTDVSDAEACERLIEAAVARFG-   77 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcC-
Confidence            478999999999999999999999999999999998888777777654  34677889999874  3455566655555 


Q ss_pred             CCccEEEEecCCCCCcccccccC-CHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhch
Q 025260          131 LDVGVLINNVGISYPYARFFHEV-DQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA  209 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~  209 (255)
                       ++|++|||||....  ..+.+. +.+++++.+++|+.+++.+++.++|.|.++ .+++|++||..+..  +.++...|+
T Consensus        78 -~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~--~~~~~~~Y~  151 (263)
T PRK06181         78 -GIDILVNNAGITMW--SRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLT--GVPTRSGYA  151 (263)
T ss_pred             -CCCEEEECCCcccc--cchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccC--CCCCccHHH
Confidence             46699999998654  446677 889999999999999999999999988654 58999999988877  677889999


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      +||+++++++++++.|+.+.|++++++.||++.|++.++.
T Consensus       152 ~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~  191 (263)
T PRK06181        152 ASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRA  191 (263)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhh
Confidence            9999999999999999999999999999999999987644

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.9e-29  Score=209.50  Aligned_cols=191  Identities=26%  Similarity=0.326  Sum_probs=158.2

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeC----ChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR----NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI  124 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r----~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~  124 (255)
                      +++++++||||++|||+++|++|+++|++|++++|    +.+..++..+++...  +.++..+.+|+++.  +++.++.+
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~   81 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA--GGKALGLAFDVRDFAATRAALDAG   81 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence            45899999999999999999999999999999765    344455555555443  34678889999874  34555555


Q ss_pred             HHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHh-hhhhhCCCcEEEEECCccccccCCCC
Q 025260          125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVL-PGMLKRKKGAIVNIGSGAAIVIPSDP  203 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~l-p~~~~~~~g~iv~vsS~~~~~~~~~~  203 (255)
                      .+.++  .+|++|||||....  .++.+.+.+++++.+++|+.+++.+++++. |.|.+++.+++|++||..+..  +.+
T Consensus        82 ~~~~~--~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~  155 (249)
T PRK12827         82 VEEFG--RLDILVNNAGIATD--AAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVR--GNR  155 (249)
T ss_pred             HHHhC--CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcC--CCC
Confidence            55555  46699999998754  457788999999999999999999999999 666666678999999998887  667


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      +...|+.+|++++.++++++.|+.+.|+++++++||+++|++..+.
T Consensus       156 ~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~  201 (249)
T PRK12827        156 GQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNA  201 (249)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCccccc
Confidence            7899999999999999999999998899999999999999987654

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.97  E-value=1.1e-29  Score=209.68  Aligned_cols=182  Identities=16%  Similarity=0.180  Sum_probs=146.5

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcC--CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G--~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      ++++||||++|||+++|++|+++|  ..|++..|+....          ....++..+++|+++.  +.++++.+.+++ 
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~----------~~~~~~~~~~~Dls~~--~~~~~~~~~~~~-   67 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD----------FQHDNVQWHALDVTDE--AEIKQLSEQFTQ-   67 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc----------cccCceEEEEecCCCH--HHHHHHHHhcCC-
Confidence            479999999999999999999985  5666666654321          1134678899999976  445556666664 


Q ss_pred             CccEEEEecCCCCCc----ccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc-CCCCCch
Q 025260          132 DVGVLINNVGISYPY----ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI-PSDPLYS  206 (255)
Q Consensus       132 ~id~lv~nag~~~~~----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~-~~~~~~~  206 (255)
                       +|++|||||.....    ...+++.+.+.+++.+++|+.+++.+++.++|.|.+++.++++++||..+... .+.+++.
T Consensus        68 -id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~  146 (235)
T PRK09009         68 -LDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWY  146 (235)
T ss_pred             -CCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcc
Confidence             56999999987431    23467888899999999999999999999999998777789999998665331 1245678


Q ss_pred             hchHHHHHHHHHHHHHHHHHcc--CCceEEEeeeeeeeeCCcchh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRK--SGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~--~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .|++||+|+++|+++|+.|+.+  .||+|++++||+++|+|.++.
T Consensus       147 ~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~  191 (235)
T PRK09009        147 SYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF  191 (235)
T ss_pred             hhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch
Confidence            9999999999999999999986  699999999999999997654

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.1e-30  Score=211.27  Aligned_cols=183  Identities=24%  Similarity=0.284  Sum_probs=151.7

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHH-HHHHhcC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVER-IKEAIEG  130 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~-~~~~~~~  130 (255)
                      ++++||||++|||++++++|+++|++|++++|+.++.  .    .+. .+.++..+.+|+++.  +++.+++ +.+.+++
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~----~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   74 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L----AAA-AGERLAEVELDLSDAAAAAAWLAGDLLAAFVD   74 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h----hhc-cCCeEEEEEeccCCHHHHHHHHHHHHHHHhcc
Confidence            3699999999999999999999999999999986531  1    111 134678899999974  2333333 4444443


Q ss_pred             -CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhch
Q 025260          131 -LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA  209 (255)
Q Consensus       131 -~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~  209 (255)
                       .++|++|||||...+ ..++.+.+.+++++.+++|+.+++.+++.++|.|.+++.|+||++||..+..  +.++...|+
T Consensus        75 ~~~~~~~v~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~~Y~  151 (243)
T PRK07023         75 GASRVLLINNAGTVEP-IGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARN--AYAGWSVYC  151 (243)
T ss_pred             CCCceEEEEcCcccCC-CCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcC--CCCCchHHH
Confidence             358899999998653 2456778999999999999999999999999999887789999999998877  678889999


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      ++|++++++++.++.| .+.||+++.|+||+++|++.+
T Consensus       152 ~sK~a~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~  188 (243)
T PRK07023        152 ATKAALDHHARAVALD-ANRALRIVSLAPGVVDTGMQA  188 (243)
T ss_pred             HHHHHHHHHHHHHHhc-CCCCcEEEEecCCccccHHHH
Confidence            9999999999999999 778999999999999999854

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.3e-29  Score=206.25  Aligned_cols=188  Identities=24%  Similarity=0.312  Sum_probs=160.8

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      ..+++++||||+|+||++++++|+++|++|++++|+++++++..+++.+.   ..+..+.+|+.+.  +++.++++.+.+
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVAAF   80 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            34899999999999999999999999999999999998888777777543   4577889999873  355556666655


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      +  ++|++|||+|....  .++.+.+.+++++.+++|+.+++.+++++++.| +++.|++|++||..+..  +.+....|
T Consensus        81 ~--~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~iv~~ss~~~~~--~~~~~~~y  153 (237)
T PRK07326         81 G--GLDVLIANAGVGHF--APVEELTPEEWRLVIDTNLTGAFYTIKAAVPAL-KRGGGYIINISSLAGTN--FFAGGAAY  153 (237)
T ss_pred             C--CCCEEEECCCCCCC--CchhhCCHHHHHHHHhhccHHHHHHHHHHHHHH-HHCCeEEEEECChhhcc--CCCCCchH
Confidence            5  46699999998643  456788999999999999999999999999988 45568999999988776  56778899


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      +++|+++.++++.++.|+...|+++++++||++.|++.+.
T Consensus       154 ~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~  193 (237)
T PRK07326        154 NASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGH  193 (237)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccccc
Confidence            9999999999999999999999999999999999987654

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=4.8e-29  Score=207.70  Aligned_cols=188  Identities=24%  Similarity=0.277  Sum_probs=156.1

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCC-hhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++++++||||++|||++++++|+++|++|++..|+ .+...+..+.+.+.  +.++..+.+|+++.  +++.++++.+.
T Consensus         4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (252)
T PRK06077          4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN--GGEGIGVLADVSTREGCETLAKATIDR   81 (252)
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc--CCeeEEEEeccCCHHHHHHHHHHHHHH
Confidence            458999999999999999999999999999887754 44444444555543  34567888999874  35566677776


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++  ++|++|||||....  .+..+.+.+.+++.+++|+.+++.+++.+.|.|.+  .|++|++||..+..  +.++...
T Consensus        82 ~~--~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~~--~~~~~~~  153 (252)
T PRK06077         82 YG--VADILVNNAGLGLF--SPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE--GGAIVNIASVAGIR--PAYGLSI  153 (252)
T ss_pred             cC--CCCEEEECCCCCCC--CChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc--CcEEEEEcchhccC--CCCCchH
Confidence            66  46699999998644  45677888889999999999999999999998854  48999999999887  7788899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |++||++++++++++++|+.+ +++++.+.||+++|++.+.+
T Consensus       154 Y~~sK~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~  194 (252)
T PRK06077        154 YGAMKAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESL  194 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhh
Confidence            999999999999999999988 99999999999999986543

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.5e-29  Score=206.36  Aligned_cols=176  Identities=28%  Similarity=0.360  Sum_probs=148.1

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhc
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE  129 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~  129 (255)
                      .+|+++||||++|||++++++|+++|++|++++|+.++.          . .  ...+.+|+++.  +++.++++.+.  
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~----------~-~--~~~~~~D~~~~~~~~~~~~~~~~~--   66 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD----------F-P--GELFACDLADIEQTAATLAQINEI--   66 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc----------c-C--ceEEEeeCCCHHHHHHHHHHHHHh--
Confidence            478999999999999999999999999999999987541          0 1  13578888874  34444444443  


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhch
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA  209 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~  209 (255)
                       .++|++|||||....  .++.+.+.+++++.+++|+.+++.+.+.++|.|++++.|+||++||... .  +.+....|+
T Consensus        67 -~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~-~--~~~~~~~Y~  140 (234)
T PRK07577         67 -HPVDAIVNNVGIALP--QPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAI-F--GALDRTSYS  140 (234)
T ss_pred             -CCCcEEEECCCCCCC--CChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccc-c--CCCCchHHH
Confidence             256799999998654  4577889999999999999999999999999998888899999999864 3  446678999


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      +||+++++++++++.|+.+.||++++++||++.|++.+.
T Consensus       141 ~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~  179 (234)
T PRK07577        141 AAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQ  179 (234)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCccccc
Confidence            999999999999999999999999999999999998753

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.1e-29  Score=207.89  Aligned_cols=184  Identities=26%  Similarity=0.356  Sum_probs=157.0

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~  130 (255)
                      +|+++||||++|||++++++|+++|++|++++|+.++.++..+++.    +.++..+.+|+.|.  +.+.++++.+.+++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG----DARFVPVACDLTDAASLAAALANAAAERGP   77 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999999888777766652    34578889999874  34455666665554


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchH
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA  210 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~a  210 (255)
                        +|++|||+|...+  .++.+.+.++|++.+++|+.+++.+.++++|.+.+++.+++|++||..+..  + .+...|++
T Consensus        78 --~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~-~~~~~y~~  150 (257)
T PRK07074         78 --VDVLVANAGAARA--ASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMA--A-LGHPAYSA  150 (257)
T ss_pred             --CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcC--C-CCCcccHH
Confidence              6699999998654  456778899999999999999999999999999888889999999977654  2 34678999


Q ss_pred             HHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          211 TKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       211 sK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      ||+|+++++++++.|+.++|++|++++||++.|++..
T Consensus       151 sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~  187 (257)
T PRK07074        151 AKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWE  187 (257)
T ss_pred             HHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhh
Confidence            9999999999999999999999999999999999864

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.97  E-value=6.9e-29  Score=206.42  Aligned_cols=191  Identities=30%  Similarity=0.340  Sum_probs=164.3

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      +++|+++||||+++||++++++|+++|++|++++|+.++.++..+++.+.+  ..+..+.+|++|.  +++.++++.+.+
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAG--GKARARQVDVRDRAALKAAVAAGVEDF   81 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            358999999999999999999999999999999999888887777776543  3478889999873  455566666666


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccc-ccCCCCCchh
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAI-VIPSDPLYSV  207 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~-~~~~~~~~~~  207 (255)
                      +  ++|++|||+|....  .++.+.+.+++++.++.|+.+++.+.+.++|.|.+++.+++|++||..+. .  +.+....
T Consensus        82 ~--~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~--~~~~~~~  155 (251)
T PRK12826         82 G--RLDILVANAGIFPL--TPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRV--GYPGLAH  155 (251)
T ss_pred             C--CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhcc--CCCCccH
Confidence            6  46699999998754  45677889999999999999999999999999988888999999998887 4  5677889


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |+++|+++++++++++.|+.+.|++++.++||.+.||+.+..
T Consensus       156 y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~  197 (251)
T PRK12826        156 YAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNL  197 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhc
Confidence            999999999999999999998999999999999999976543

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=3.4e-31  Score=200.40  Aligned_cols=193  Identities=27%  Similarity=0.299  Sum_probs=169.2

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~  128 (255)
                      .+|-+++||||.+|+|++.|++|+++|+.|++.|-..++.++..+++     +.++.+..+|+++  +++.++...+.++
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel-----g~~~vf~padvtsekdv~aala~ak~kf   81 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL-----GGKVVFTPADVTSEKDVRAALAKAKAKF   81 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh-----CCceEEeccccCcHHHHHHHHHHHHhhc
Confidence            46899999999999999999999999999999999999888888877     5578888999987  4566778888888


Q ss_pred             cCCCccEEEEecCCCCCcc----cccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC------CCcEEEEECCccccc
Q 025260          129 EGLDVGVLINNVGISYPYA----RFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR------KKGAIVNIGSGAAIV  198 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~------~~g~iv~vsS~~~~~  198 (255)
                      ++.|  .+|||||+.....    ..-...+.|++++++++|++|+|++++.-.-.|-++      ++|.||++.|.++..
T Consensus        82 grld--~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafd  159 (260)
T KOG1199|consen   82 GRLD--ALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFD  159 (260)
T ss_pred             ccee--eeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeec
Confidence            8655  9999999965311    223466889999999999999999999988888654      257899999999998


Q ss_pred             cCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhhhh
Q 025260          199 IPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLVMI  252 (255)
Q Consensus       199 ~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~  252 (255)
                        +..+..+|++||.|+.+|+--++++++..|||++.+.||..+||++..+.++
T Consensus       160 --gq~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpek  211 (260)
T KOG1199|consen  160 --GQTGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEK  211 (260)
T ss_pred             --CccchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHH
Confidence              7889999999999999999999999999999999999999999999988864

>PRK08264 short chain dehydrogenase; Validated

Probab=99.97  E-value=1.1e-28  Score=203.95  Aligned_cols=183  Identities=27%  Similarity=0.317  Sum_probs=156.8

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      +.++++++||||+||||+++|++|+++|+ +|++++|+.+++++         ....+..+.+|++|.  +.++++.+.+
T Consensus         3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---------~~~~~~~~~~D~~~~--~~~~~~~~~~   71 (238)
T PRK08264          3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---------LGPRVVPLQLDVTDP--ASVAAAAEAA   71 (238)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---------cCCceEEEEecCCCH--HHHHHHHHhc
Confidence            35689999999999999999999999999 99999999876543         134678889999875  4445555544


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      +  ++|++|||||.... ..++.+.+.+++++.+++|+.+++.+++++.|.+++++.+++|++||..+..  +.++...|
T Consensus        72 ~--~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~--~~~~~~~y  146 (238)
T PRK08264         72 S--DVTILVNNAGIFRT-GSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWV--NFPNLGTY  146 (238)
T ss_pred             C--CCCEEEECCCcCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcc--CCCCchHh
Confidence            4  46799999998432 2457788999999999999999999999999999888889999999988877  66788899


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      +++|++++++++.++.|+.+.|+++++++||.++|++.+.
T Consensus       147 ~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~  186 (238)
T PRK08264        147 SASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAG  186 (238)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccccccc
Confidence            9999999999999999999999999999999999998654

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.3e-28  Score=204.32  Aligned_cols=184  Identities=27%  Similarity=0.339  Sum_probs=153.9

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      +++++++++||||++|||+++++.|+++|++|++++|+.++.++..++.       ....+.+|+++.  +.++++.+..
T Consensus         5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~--~~v~~~~~~~   75 (245)
T PRK07060          5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-------GCEPLRLDVGDD--AAIRAALAAA   75 (245)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------CCeEEEecCCCH--HHHHHHHHHh
Confidence            4567999999999999999999999999999999999987765544332       234677898874  3344444444


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCchh
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +  ++|++|||||....  .+..+.+.+++++.+++|+.+++.+++++++.+.+++ .|+||++||..+..  +.+....
T Consensus        76 ~--~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~  149 (245)
T PRK07060         76 G--AFDGLVNCAGIASL--ESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALV--GLPDHLA  149 (245)
T ss_pred             C--CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcC--CCCCCcH
Confidence            4  46799999998643  4466788899999999999999999999999887654 48999999998877  6677889


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      |++||++++.++++++.|+.+.|+++++++||++.|++.+
T Consensus       150 y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~  189 (245)
T PRK07060        150 YCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAA  189 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhh
Confidence            9999999999999999999988999999999999999854

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.97  E-value=1.6e-28  Score=203.83  Aligned_cols=187  Identities=26%  Similarity=0.355  Sum_probs=155.3

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEE-EeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG  130 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~  130 (255)
                      |+++||||++|||++++++|+++|++|++ ..|+.++.++..+++.+.  +..+..+.+|++|.  +++.++++.+.++ 
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~~~~-   78 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA--GGKAFVLQADISDENQVVAMFTAIDQHDE-   78 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC--CCeEEEEEccCCCHHHHHHHHHHHHHhCC-
Confidence            58999999999999999999999999987 468877777777776553  34577889999874  3555566665555 


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC---CcEEEEECCccccccCCCCC-ch
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK---KGAIVNIGSGAAIVIPSDPL-YS  206 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~---~g~iv~vsS~~~~~~~~~~~-~~  206 (255)
                       .+|++|||||.... ..+..+.+.++++..+++|+.+++.+++.+++.|.++.   +|++|++||..+..  +.|. ..
T Consensus        79 -~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~--~~~~~~~  154 (247)
T PRK09730         79 -PLAALVNNAGILFT-QCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRL--GAPGEYV  154 (247)
T ss_pred             -CCCEEEECCCCCCC-CCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcc--CCCCccc
Confidence             46699999997543 24467889999999999999999999999999997653   57899999988876  4454 46


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      .|+++|++++.++++++.|+.+.|+++++++||++.||+..
T Consensus       155 ~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~  195 (247)
T PRK09730        155 DYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHA  195 (247)
T ss_pred             chHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccc
Confidence            89999999999999999999999999999999999999754

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.96  E-value=2.8e-28  Score=202.17  Aligned_cols=191  Identities=29%  Similarity=0.382  Sum_probs=160.0

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh-hHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD-KLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++|+++||||+++||.+++++|+++|++|++..|+.. ..++..+++...  +.++..+.+|+++.  +.+.++++.+.
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL--GGKALAVQGDVSDAESVERAVDEAKAE   80 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45899999999999999999999999999988887654 355555555433  45678888999874  34555666665


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++  ++|++|||||....  .+..+.+.+.+++.+++|+.+++.+.+.++|.+.+++.+++|++||..+..  +.++...
T Consensus        81 ~~--~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~--~~~~~~~  154 (248)
T PRK05557         81 FG--GVDILVNNAGITRD--NLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLM--GNPGQAN  154 (248)
T ss_pred             cC--CCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCc--CCCCCch
Confidence            55  46699999998654  446678889999999999999999999999999887788999999988776  5677899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |+++|++++.+++.++.++...|+++++++||++.|++.+..
T Consensus       155 y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~  196 (248)
T PRK05557        155 YAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDAL  196 (248)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccccc
Confidence            999999999999999999998999999999999999887654

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=7.6e-29  Score=223.38  Aligned_cols=186  Identities=22%  Similarity=0.294  Sum_probs=155.0

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh--hhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP--DKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      ++|++++||||++|||+++|++|+++|++|++++|..  +++++..+++     +  ...+.+|+++.  +++.++.+.+
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~-----~--~~~~~~Dv~~~~~~~~~~~~~~~  280 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV-----G--GTALALDITAPDAPARIAEHLAE  280 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-----C--CeEEEEeCCCHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999853  2333332222     1  24678899874  3455555555


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .++  .+|++|||||+...  ..+.+.+.++|++++++|+.+++++.+.++|.+..+++++||++||.++..  +.++..
T Consensus       281 ~~g--~id~vi~~AG~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~--g~~~~~  354 (450)
T PRK08261        281 RHG--GLDIVVHNAGITRD--KTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIA--GNRGQT  354 (450)
T ss_pred             hCC--CCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcC--CCCCCh
Confidence            555  46699999998754  557888999999999999999999999999977666779999999999887  678889


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .|+++|+++++|+++++.|+.++||++|+++||+++|+|.+.+
T Consensus       355 ~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~  397 (450)
T PRK08261        355 NYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAI  397 (450)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhcc
Confidence            9999999999999999999999999999999999999987653

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.3e-28  Score=202.54  Aligned_cols=175  Identities=15%  Similarity=0.201  Sum_probs=147.5

Q ss_pred             EEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCccEE
Q 025260           57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVL  136 (255)
Q Consensus        57 lITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id~l  136 (255)
                      +||||++|||++++++|+++|++|++++|+++++++..+++++   ...+..+.+|+++.  +.++++.+.++  ++|++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~--~~~~~~~~~~~--~id~l   73 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG---GAPVRTAALDITDE--AAVDAFFAEAG--PFDHV   73 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCceEEEEccCCCH--HHHHHHHHhcC--CCCEE
Confidence            6999999999999999999999999999998887776666642   34577889999975  44455555555  46699


Q ss_pred             EEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHHHHHHH
Q 025260          137 INNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYID  216 (255)
Q Consensus       137 v~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~asK~al~  216 (255)
                      |||+|....  .++.+.+.+++++++++|+.+++++++  .+.+  ++.|+||++||..+..  +.+....|++||++++
T Consensus        74 i~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~--~~~g~iv~~ss~~~~~--~~~~~~~Y~~sK~a~~  145 (230)
T PRK07041         74 VITAADTPG--GPVRALPLAAAQAAMDSKFWGAYRVAR--AARI--APGGSLTFVSGFAAVR--PSASGVLQGAINAALE  145 (230)
T ss_pred             EECCCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHh--hhhh--cCCeEEEEECchhhcC--CCCcchHHHHHHHHHH
Confidence            999998654  457788999999999999999999999  4444  3468999999999887  6788899999999999


Q ss_pred             HHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          217 QFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       217 ~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      +++++++.|+.+  ++|++++||+++|+++..
T Consensus       146 ~~~~~la~e~~~--irv~~i~pg~~~t~~~~~  175 (230)
T PRK07041        146 ALARGLALELAP--VRVNTVSPGLVDTPLWSK  175 (230)
T ss_pred             HHHHHHHHHhhC--ceEEEEeecccccHHHHh
Confidence            999999999974  999999999999998654

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.3e-28  Score=201.71  Aligned_cols=189  Identities=25%  Similarity=0.333  Sum_probs=160.3

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      ++++|+++||||+++||.+++++|+++|++|++++|++.+..+..+++.+.    ....+.+|+.|.  +++.++++.+.
T Consensus         4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~   79 (239)
T PRK12828          4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD----ALRIGGIDLVDPQAARRAVDEVNRQ   79 (239)
T ss_pred             CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc----CceEEEeecCCHHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999988777666665432    245566888763  45666777776


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|++|||+|....  ....+.+.+++++.+++|+.++..++++++|.|.+++.+++|++||..+..  +.+....
T Consensus        80 ~~~--~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~  153 (239)
T PRK12828         80 FGR--LDALVNIAGAFVW--GTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALK--AGPGMGA  153 (239)
T ss_pred             hCC--cCEEEECCcccCc--CChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhcc--CCCCcch
Confidence            664  5699999998643  346677889999999999999999999999999887889999999998877  5677889


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      |+++|++++.+++.+++++.+.|++++.++||++.|++.+.
T Consensus       154 y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~  194 (239)
T PRK12828        154 YAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRA  194 (239)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhh
Confidence            99999999999999999998889999999999999986543

>PRK08324 short chain dehydrogenase; Validated

Probab=99.96  E-value=2.8e-28  Score=229.34  Aligned_cols=190  Identities=25%  Similarity=0.292  Sum_probs=165.5

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      .++||+++||||+||||++++++|+++|++|++++|+.+.+++..+++...   ..+..+.+|+++.  +++.++++.+.
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~~~~  495 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEAALA  495 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999998888777766543   4578889999874  35556666666


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCC-cEEEEECCccccccCCCCCch
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~-g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      +++  +|++|||||....  .++.+.+.++|++.+++|+.|++.+++.++|.|++++. |+||++||..+..  +.++..
T Consensus       496 ~g~--iDvvI~~AG~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~--~~~~~~  569 (681)
T PRK08324        496 FGG--VDIVVSNAGIAIS--GPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVN--PGPNFG  569 (681)
T ss_pred             cCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccC--CCCCcH
Confidence            664  5699999998754  56788899999999999999999999999999988764 8999999998887  678889


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeee--eeCCcch
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLL--CFYNLND  248 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v--~T~~~~~  248 (255)
                      +|++||+++++++++++.|+.+.||+||.++||.+  .|+++.+
T Consensus       570 ~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~  613 (681)
T PRK08324        570 AYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTG  613 (681)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccc
Confidence            99999999999999999999999999999999999  8887654

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.96  E-value=3.2e-28  Score=203.00  Aligned_cols=188  Identities=24%  Similarity=0.329  Sum_probs=160.9

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~  130 (255)
                      +|+++||||+++||++++++|+++|++|++++|+.+..++..+++...  +.++..+.+|+.+.  +++.++.+.+.+++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA--GGSVIYLVADVTKEDEIADMIAAAAAEFGG   78 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            478999999999999999999999999999999988887777766543  34688889999873  34555666665554


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchH
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA  210 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~a  210 (255)
                        +|++|||||....  .+..+.+.++++++++.|+.+++.+++.++|.|.+.+.+++|++||..+..  +.+....|++
T Consensus        79 --~d~vi~~a~~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~--~~~~~~~y~~  152 (255)
T TIGR01963        79 --LDILVNNAGIQHV--APIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLV--ASPFKSAYVA  152 (255)
T ss_pred             --CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcC--CCCCCchhHH
Confidence              6699999998643  445677888999999999999999999999999887788999999988777  6677899999


Q ss_pred             HHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          211 TKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       211 sK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      +|+++++++++++.++.+.|++++.++||++.||+..+
T Consensus       153 sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~  190 (255)
T TIGR01963       153 AKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEK  190 (255)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHH
Confidence            99999999999999998889999999999999987644

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.1e-28  Score=203.48  Aligned_cols=179  Identities=15%  Similarity=0.135  Sum_probs=133.3

Q ss_pred             cccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHH
Q 025260           47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKE  126 (255)
Q Consensus        47 ~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  126 (255)
                      .+.+++||+++||||++|||+++|++|+++|++|++++|+..+..+  +.  ..  .. ...+.+|+++.     +.+.+
T Consensus         8 ~~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~--~~--~~--~~-~~~~~~D~~~~-----~~~~~   75 (245)
T PRK12367          8 AQSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE--SN--DE--SP-NEWIKWECGKE-----ESLDK   75 (245)
T ss_pred             hHHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh--hh--cc--CC-CeEEEeeCCCH-----HHHHH
Confidence            3445679999999999999999999999999999999998632211  11  11  11 25678899875     33445


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC---CCcEEEEECCccccccCCCC
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR---KKGAIVNIGSGAAIVIPSDP  203 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~---~~g~iv~vsS~~~~~~~~~~  203 (255)
                      .+++  +|++|||||...     ..+.+.++|++.+++|+.+++++++.++|.|+++   +++.+++.+|.++..  + +
T Consensus        76 ~~~~--iDilVnnAG~~~-----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~--~-~  145 (245)
T PRK12367         76 QLAS--LDVLILNHGINP-----GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQ--P-A  145 (245)
T ss_pred             hcCC--CCEEEECCccCC-----cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccC--C-C
Confidence            5564  669999999742     2356789999999999999999999999999763   233454555655544  2 3


Q ss_pred             CchhchHHHHHHHHHH---HHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          204 LYSVYAATKAYIDQFS---RSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~---~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      ....|++||+|+..+.   +.++.|+...|++|+.+.||+++|++..
T Consensus       146 ~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~  192 (245)
T PRK12367        146 LSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP  192 (245)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc
Confidence            5678999999986543   4444455678999999999999999743

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.6e-28  Score=203.13  Aligned_cols=190  Identities=23%  Similarity=0.306  Sum_probs=159.9

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      +++|+++||||++|||++++++|+++|++|++++|+++..++..++..    ..++..+.+|+++.  +++.++++.+.+
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP----GAKVTATVADVADPAQVERVFDTAVERF   84 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----cCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            568999999999999999999999999999999999877766555443    22578889999874  355566666666


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCC-cEEEEECCccccccCCCCCchh
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~-g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +  ++|++|||||...+ .....+.+.+.+++.+++|+.+++.+++.+++.+.+.+. ++++++||..+..  +.+....
T Consensus        85 ~--~~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~--~~~~~~~  159 (264)
T PRK12829         85 G--GLDVLVNNAGIAGP-TGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRL--GYPGRTP  159 (264)
T ss_pred             C--CCCEEEECCCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEeccccccc--CCCCCch
Confidence            6  46699999998733 244667888999999999999999999999998877665 7899999988776  6677889


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |+.+|++++.+++.++.|+...++++++++||++.||+.+..
T Consensus       160 y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~  201 (264)
T PRK12829        160 YAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRV  201 (264)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHH
Confidence            999999999999999999988899999999999999987654

>PRK08017 oxidoreductase; Provisional

Probab=99.96  E-value=3.8e-28  Score=202.83  Aligned_cols=183  Identities=23%  Similarity=0.352  Sum_probs=154.0

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcCC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGL  131 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~  131 (255)
                      |+++||||+||||.+++++|+++|++|++++|+.+++++..    +.    .+..+.+|++|.  +++.++.+.+..+ .
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~~----~~~~~~~D~~~~~~~~~~~~~i~~~~~-~   73 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----SL----GFTGILLDLDDPESVERAADEVIALTD-N   73 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----hC----CCeEEEeecCCHHHHHHHHHHHHHhcC-C
Confidence            68999999999999999999999999999999987765432    11    246678888863  3444455544332 2


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHH
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAAT  211 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~as  211 (255)
                      ++|.+|||+|....  .++.+.+.+++++.+++|+.|++.+++.++|.|++++.+++|++||..+..  +.+....|++|
T Consensus        74 ~~~~ii~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~--~~~~~~~Y~~s  149 (256)
T PRK08017         74 RLYGLFNNAGFGVY--GPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLI--STPGRGAYAAS  149 (256)
T ss_pred             CCeEEEECCCCCCc--cchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCccccc--CCCCccHHHHH
Confidence            57799999997643  457788999999999999999999999999999888889999999998877  66888999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          212 KAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       212 K~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |++++.++++++.|+.+.|+++++++||.+.|++.++.
T Consensus       150 K~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~  187 (256)
T PRK08017        150 KYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNV  187 (256)
T ss_pred             HHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcc
Confidence            99999999999999999999999999999999987654

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.96  E-value=8.4e-28  Score=199.04  Aligned_cols=190  Identities=29%  Similarity=0.428  Sum_probs=162.9

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      ..+|+++||||+++||.+++++|+++|++|++++|++++.++..+++.+.  ..++.++.+|++|.  +.+.++.+.+.+
T Consensus         3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T PRK05653          3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA--GGEARVLVFDVSDEAAVRALIEAAVEAF   80 (246)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            34789999999999999999999999999999999998887777776644  34678888999874  345555565555


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      +  ++|++|||||....  .+..+.+.+++++.++.|+.++..+++.+.|.|.+.+.+++|++||..+..  +.+....|
T Consensus        81 ~--~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~--~~~~~~~y  154 (246)
T PRK05653         81 G--ALDILVNNAGITRD--ALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVT--GNPGQTNY  154 (246)
T ss_pred             C--CCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc--CCCCCcHh
Confidence            5  46699999998654  446678889999999999999999999999999877778999999988776  56778899


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      +.+|++++.+++++++++.+.|+++++++||.+.+++...
T Consensus       155 ~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~  194 (246)
T PRK05653        155 SAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEG  194 (246)
T ss_pred             HhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh
Confidence            9999999999999999998889999999999999998764

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.2e-27  Score=195.96  Aligned_cols=182  Identities=16%  Similarity=0.200  Sum_probs=144.7

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      |+++||||+++||++++++|+++|++|++++|+.+..++..    ..    ....+.+|+++.  +.++++.+.+.+.++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~----~~----~~~~~~~D~~~~--~~v~~~~~~~~~~~~   71 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ----AL----GAEALALDVADP--ASVAGLAWKLDGEAL   71 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH----hc----cceEEEecCCCH--HHHHHHHHHhcCCCC
Confidence            57999999999999999999999999999999977655432    21    235789999975  444445444444468


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC-CCCCchhchHHH
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP-SDPLYSVYAATK  212 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~-~~~~~~~Y~asK  212 (255)
                      |++|||+|.......+..+.+.+++++.+++|+.+++.++++++|.|.+ ..|+++++||..+.... +.+....|+++|
T Consensus        72 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK  150 (222)
T PRK06953         72 DAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEA-AGGVLAVLSSRMGSIGDATGTTGWLYRASK  150 (222)
T ss_pred             CEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhc-cCCeEEEEcCcccccccccCCCccccHHhH
Confidence            8999999986432344667789999999999999999999999998754 46899999998776521 111123699999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          213 AYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       213 ~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++++++++.++.|+.  +++|++++||+++|++.+.
T Consensus       151 ~a~~~~~~~~~~~~~--~i~v~~v~Pg~i~t~~~~~  184 (222)
T PRK06953        151 AALNDALRAASLQAR--HATCIALHPGWVRTDMGGA  184 (222)
T ss_pred             HHHHHHHHHHhhhcc--CcEEEEECCCeeecCCCCC
Confidence            999999999999874  7999999999999999664

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=2.6e-27  Score=196.29  Aligned_cols=190  Identities=28%  Similarity=0.377  Sum_probs=157.4

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh-hHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD-KLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      +.|+++||||+++||++++++|+++|++|++..|+.+ ..+...+.+.+.  +.++..+.+|+++.  +++.++++.+.+
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL--GRRAQAVQADVTDKAALEAAVAAAVERF   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCcCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999888666544 344444444443  34577888999874  345555555555


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      +  ++|++|||||....  .++.+.+.+++++.+++|+.+++.+++.++|.+.+.+.+++|++||..+..  +.+....|
T Consensus        83 ~--~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~--~~~~~~~y  156 (249)
T PRK12825         83 G--RIDILVNNAGIFED--KPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLP--GWPGRSNY  156 (249)
T ss_pred             C--CCCEEEECCccCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCC--CCCCchHH
Confidence            5  46699999997643  456778899999999999999999999999999887788999999998876  66778899


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      +.+|++++++++.++.|+.+.|++++.++||.+.|++....
T Consensus       157 ~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~  197 (249)
T PRK12825        157 AAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEAT  197 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccc
Confidence            99999999999999999998899999999999999987654

>PRK09135 pteridine reductase; Provisional

Probab=99.96  E-value=3.6e-27  Score=195.82  Aligned_cols=187  Identities=24%  Similarity=0.276  Sum_probs=152.8

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCC-hhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      ++++++||||+++||++++++|+++|++|++++|+ ++..++..+++.... ...+..+.+|++|.  +++.++.+.+.+
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALR-PGSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            47899999999999999999999999999999986 444555555554432 23577889999873  355556666666


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      +  ++|++|||||...+  .++.+.+.+++++.+++|+.|++.+.+++.|.+.++ .|++++++|..+..  +.++...|
T Consensus        84 ~--~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~Y  156 (249)
T PRK09135         84 G--RLDALVNNASSFYP--TPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ-RGAIVNITDIHAER--PLKGYPVY  156 (249)
T ss_pred             C--CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC-CeEEEEEeChhhcC--CCCCchhH
Confidence            5  46699999998654  446677888999999999999999999999987554 57888888876655  56778899


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      ++||++++.+++.++.|+.+ ++++++++||++.||+.+
T Consensus       157 ~~sK~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~  194 (249)
T PRK09135        157 CAAKAALEMLTRSLALELAP-EVRVNAVAPGAILWPEDG  194 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHCC-CCeEEEEEeccccCcccc
Confidence            99999999999999999965 799999999999999864

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.96  E-value=5.3e-27  Score=193.65  Aligned_cols=185  Identities=30%  Similarity=0.429  Sum_probs=155.7

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCCh-hhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcCCC
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGLD  132 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~~  132 (255)
                      ++|||++++||.+++++|+++|++|++++|+. +..++..+++.+.  +.++..+.+|++|.  +++.++.+.+.++  .
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~   76 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY--GVKALGVVCDVSDREDVKAVVEEIEEELG--P   76 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHhC--C
Confidence            58999999999999999999999999999875 4455555555443  34578889999874  3555666666666  4


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHHH
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATK  212 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~asK  212 (255)
                      +|++|||+|....  .++.+.+.+++++.+++|+.+++.+.+.+.|.+.+++.++++++||..+..  +.+....|+++|
T Consensus        77 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~--g~~~~~~y~~~k  152 (239)
T TIGR01830        77 IDILVNNAGITRD--NLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLM--GNAGQANYAASK  152 (239)
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccC--CCCCCchhHHHH
Confidence            6699999998644  346677889999999999999999999999999777788999999988877  667889999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          213 AYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       213 ~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++++.+++.|+.++...|+++++++||++.|++.+.
T Consensus       153 ~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~  188 (239)
T TIGR01830       153 AGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDK  188 (239)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhh
Confidence            999999999999999899999999999999987654

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.4e-27  Score=198.55  Aligned_cols=184  Identities=22%  Similarity=0.219  Sum_probs=144.5

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh-hHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD-KLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++|+++||||++|||++++++|+++|++|++.+|+.+ ..++..++++..  +.++..+.+|+++.  +++.++++.+.
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA--GGRASAVGADLTDEESVAALMDTAREE   81 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            45899999999999999999999999999999999754 455555556543  34577889999974  34455555555


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc---CCCCC
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI---PSDPL  204 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~---~~~~~  204 (255)
                      ++  ++|++|||||....  .   +.   +++..+++|+.+++++++.+.|.|.+  ++++|++||..+...   .+.+.
T Consensus        82 ~~--~~d~vi~~ag~~~~--~---~~---~~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~~~  149 (248)
T PRK07806         82 FG--GLDALVLNASGGME--S---GM---DEDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQAHFIPTVKTMPE  149 (248)
T ss_pred             CC--CCcEEEECCCCCCC--C---CC---CcceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchhhcCccccCCcc
Confidence            55  46699999986422  1   11   24567899999999999999998843  479999999654321   13455


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      +..|++||++++.++++++.|+++.||+|+++.||++.|++...
T Consensus       150 ~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~  193 (248)
T PRK07806        150 YEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTAT  193 (248)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhh
Confidence            77899999999999999999999999999999999999987654

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=7.8e-27  Score=192.86  Aligned_cols=186  Identities=21%  Similarity=0.210  Sum_probs=151.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      ++++|+++||||++|||.+++++|+++|++|++++|++++.++..+++.+.   ..+..+.+|+++.  +++.++++.+.
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~   78 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY---GNIHYVVGDVSSTESARNVIEKAAKV   78 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEECCCCCHHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999988877766665542   2467789999874  34455555555


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++.  +|.+|+|+|....  .++.  +.+++++.+++|+.+++.+.+.++|.|.+  +|++|++||..+... +.+....
T Consensus        79 ~~~--id~ii~~ag~~~~--~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~-~~~~~~~  149 (238)
T PRK05786         79 LNA--IDGLVVTVGGYVE--DTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSGIYK-ASPDQLS  149 (238)
T ss_pred             hCC--CCEEEEcCCCcCC--CchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchhccc-CCCCchH
Confidence            554  5699999997543  2232  33789999999999999999999998753  489999999876431 4466788


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      |++||++++.++++++.|+.+.|++++.++||++.|++..
T Consensus       150 Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~  189 (238)
T PRK05786        150 YAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEP  189 (238)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCc
Confidence            9999999999999999999999999999999999998753

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.94  E-value=5.2e-25  Score=193.84  Aligned_cols=173  Identities=18%  Similarity=0.195  Sum_probs=133.0

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      ++||+++||||++|||++++++|+++|++|++++|+++++++..+   +.  ......+.+|++|.     +.+.+.+++
T Consensus       176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~---~~--~~~v~~v~~Dvsd~-----~~v~~~l~~  245 (406)
T PRK07424        176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEIN---GE--DLPVKTLHWQVGQE-----AALAELLEK  245 (406)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh---hc--CCCeEEEEeeCCCH-----HHHHHHhCC
Confidence            468999999999999999999999999999999998776543221   11  22356788999875     344555664


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCC----cEEEEECCccccccCCCCCch
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK----GAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~----g~iv~vsS~~~~~~~~~~~~~  206 (255)
                        +|++|||||....     .+.+.+++++.+++|+.|++.++++++|.|++++.    +.+|++|+ ++..  + +..+
T Consensus       246 --IDiLInnAGi~~~-----~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~~--~-~~~~  314 (406)
T PRK07424        246 --VDILIINHGINVH-----GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEVN--P-AFSP  314 (406)
T ss_pred             --CCEEEECCCcCCC-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cccc--C-CCch
Confidence              6699999997532     36788899999999999999999999999987642    34566654 3332  2 4457


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      .|++||+|+.+|++ ++++.  .++.|..+.||+++|++.+
T Consensus       315 ~Y~ASKaAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~~  352 (406)
T PRK07424        315 LYELSKRALGDLVT-LRRLD--APCVVRKLILGPFKSNLNP  352 (406)
T ss_pred             HHHHHHHHHHHHHH-HHHhC--CCCceEEEEeCCCcCCCCc
Confidence            89999999999985 55443  4678888999999998754

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.93  E-value=9.3e-25  Score=178.97  Aligned_cols=180  Identities=26%  Similarity=0.339  Sum_probs=148.8

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      .|+++||||+++||++++++|+++ ++|++++|+.++.++..++.      ..+.++.+|++|.  +.++++.+.++  +
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~--~~~~~~~~~~~--~   71 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL------PGATPFPVDLTDP--EAIAAAVEQLG--R   71 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh------ccceEEecCCCCH--HHHHHHHHhcC--C
Confidence            578999999999999999999999 99999999987665443322      1366789999874  34444444443  5


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHHH
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATK  212 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~asK  212 (255)
                      +|++||++|....  .+..+.+.+++++.+++|+.+++.+++.+++.+.++ .+++|++||..+..  +.++...|+.+|
T Consensus        72 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~--~~~~~~~y~~~K  146 (227)
T PRK08219         72 LDVLVHNAGVADL--GPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLR--ANPGWGSYAASK  146 (227)
T ss_pred             CCEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcC--cCCCCchHHHHH
Confidence            7799999998643  456678889999999999999999999999988765 57999999998877  667789999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          213 AYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       213 ~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ++++++.+.++.++... +++++++||++.|++....
T Consensus       147 ~a~~~~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~  182 (227)
T PRK08219        147 FALRALADALREEEPGN-VRVTSVHPGRTDTDMQRGL  182 (227)
T ss_pred             HHHHHHHHHHHHHhcCC-ceEEEEecCCccchHhhhh
Confidence            99999999999998765 9999999999999876544

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.93  E-value=8.3e-27  Score=184.00  Aligned_cols=192  Identities=19%  Similarity=0.157  Sum_probs=139.4

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh--c
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI--E  129 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~--~  129 (255)
                      .++++|+||+|.|||..++..+.+++-......++....+  .+.++..++ ........|.++  +.....+.+..  +
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~g-d~~v~~~g~~~e--~~~l~al~e~~r~k   79 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYG-DDFVHVVGDITE--EQLLGALREAPRKK   79 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEec-CCcceechHHHH--HHHHHHHHhhhhhc
Confidence            3689999999999999999888887755444333333222  111111111 111112222221  12222222222  2


Q ss_pred             CCCccEEEEecCCCCCccccc-ccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCchh
Q 025260          130 GLDVGVLINNVGISYPYARFF-HEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~-~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +...|++|||||...+..+.+ +..+.+.|++.++.|+++.+.+.+.++|.+++++ .+.+||+||.++..  |.+.++.
T Consensus        80 ~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~--p~~~wa~  157 (253)
T KOG1204|consen   80 GGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVR--PFSSWAA  157 (253)
T ss_pred             CCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhc--cccHHHH
Confidence            225679999999987643322 3678889999999999999999999999998875 79999999999998  8999999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhhh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLVM  251 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~  251 (255)
                      |+++|+|.++|++.|+.|-. ++|+|.++.||.++|+|.-...+
T Consensus       158 yc~~KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~  200 (253)
T KOG1204|consen  158 YCSSKAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRE  200 (253)
T ss_pred             hhhhHHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhh
Confidence            99999999999999999976 79999999999999999766553

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.92  E-value=5.5e-24  Score=218.54  Aligned_cols=182  Identities=15%  Similarity=0.168  Sum_probs=149.3

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHc-CCcEEEEeCCh--------------h----------------------------
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNP--------------D----------------------------   88 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~-G~~V~l~~r~~--------------~----------------------------   88 (255)
                      +|+++|||||++|||.++|++|+++ |++|++++|+.              .                            
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5899999999999999999999998 69999999982              0                            


Q ss_pred             -----hHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhH
Q 025260           89 -----KLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNL  161 (255)
Q Consensus        89 -----~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~  161 (255)
                           +..+..+++.+.  +.++.++.+|++|.  +++.++++.+. +  .+|+||||||+...  +.+.+.+.++|+++
T Consensus      2076 ~~~~~ei~~~la~l~~~--G~~v~y~~~DVtD~~av~~av~~v~~~-g--~IDgVVhnAGv~~~--~~i~~~t~e~f~~v 2148 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAA--GASAEYASADVTNSVSVAATVQPLNKT-L--QITGIIHGAGVLAD--KHIQDKTLEEFNAV 2148 (2582)
T ss_pred             cchhHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHh-C--CCcEEEECCccCCC--CCcccCCHHHHHHH
Confidence                 111122223222  34678899999984  45666666554 3  57799999998754  66889999999999


Q ss_pred             hHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeee
Q 025260          162 IKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLL  241 (255)
Q Consensus       162 ~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v  241 (255)
                      +++|+.|.+++++++.+.+.    ++||++||..+..  +.++...|+++|++++.+++.++.++.  +++|++|+||++
T Consensus      2149 ~~~nv~G~~~Ll~al~~~~~----~~IV~~SSvag~~--G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~w 2220 (2582)
T TIGR02813      2149 YGTKVDGLLSLLAALNAENI----KLLALFSSAAGFY--GNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPW 2220 (2582)
T ss_pred             HHHHHHHHHHHHHHHHHhCC----CeEEEEechhhcC--CCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCee
Confidence            99999999999999877443    4699999999998  778899999999999999999999974  589999999999


Q ss_pred             eeCCcch
Q 025260          242 CFYNLND  248 (255)
Q Consensus       242 ~T~~~~~  248 (255)
                      +|+|...
T Consensus      2221 dtgm~~~ 2227 (2582)
T TIGR02813      2221 DGGMVNP 2227 (2582)
T ss_pred             cCCccch
Confidence            9999754

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.92  E-value=6e-24  Score=170.12  Aligned_cols=196  Identities=20%  Similarity=0.224  Sum_probs=165.4

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcC-----CcEEEEeCChhhHHHHHHHHHhhcC--CceEEEEEEECCC--CcHHHHHH
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTG-----LNLVLVGRNPDKLKDVSDSIQAKYA--KTQIKSVVVDFSG--DLDEGVER  123 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G-----~~V~l~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~--~~~~~~~~  123 (255)
                      .|+++|||++||||.++|++|.+..     .++++++|+.++.+++...+++.+|  ..++.++.+|+++  ++..+.++
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            4899999999999999999998764     3588899999999999999999988  5678999999997  45677788


Q ss_pred             HHHHhcCCCccEEEEecCCCCCccc-------------------------ccccCCHHHHHhHhHHhhhHHHHHHHHHhh
Q 025260          124 IKEAIEGLDVGVLINNVGISYPYAR-------------------------FFHEVDQVLLKNLIKVNVEGTTKVTQAVLP  178 (255)
Q Consensus       124 ~~~~~~~~~id~lv~nag~~~~~~~-------------------------~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp  178 (255)
                      +++.++++|  .+..|||++....-                         .....+.|++..+++.|++||+.+.+.+.|
T Consensus        83 i~~rf~~ld--~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~p  160 (341)
T KOG1478|consen   83 IKQRFQRLD--YIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEP  160 (341)
T ss_pred             HHHHhhhcc--EEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhh
Confidence            888888655  99999998742110                         011357788899999999999999999999


Q ss_pred             hhhhCCCcEEEEECCccccccC-------CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          179 GMLKRKKGAIVNIGSGAAIVIP-------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       179 ~~~~~~~g~iv~vsS~~~~~~~-------~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      .+..++...+|.+||..+.-..       -..+..+|+.||.+.+-++-++-+.+.+.|+.-.+++||...|.+...+.
T Consensus       161 ll~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~l  239 (341)
T KOG1478|consen  161 LLCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEYL  239 (341)
T ss_pred             HhhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhhh
Confidence            9988877899999997765421       12346789999999999999999999999999999999999999887654

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.91  E-value=7e-24  Score=175.97  Aligned_cols=153  Identities=23%  Similarity=0.252  Sum_probs=121.7

Q ss_pred             HHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCccEEEEecCCCCCccc
Q 025260           69 FAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYAR  148 (255)
Q Consensus        69 la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~  148 (255)
                      +|++|+++|++|++.+|++++.+     .        ...+.+|++|.  +.++++.+...+ ++|+||||||....   
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~--------~~~~~~Dl~~~--~~v~~~~~~~~~-~iD~li~nAG~~~~---   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-----L--------DGFIQADLGDP--ASIDAAVAALPG-RIDALFNIAGVPGT---   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-----h--------hHhhcccCCCH--HHHHHHHHHhcC-CCeEEEECCCCCCC---
Confidence            47899999999999999976532     0        13468898874  333444333322 57799999997521   


Q ss_pred             ccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc-------------------------CCCC
Q 025260          149 FFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI-------------------------PSDP  203 (255)
Q Consensus       149 ~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~-------------------------~~~~  203 (255)
                             +.+++++++|+.+++.+++.++|.|.+  .|+||++||.++...                         .+.+
T Consensus        62 -------~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (241)
T PRK12428         62 -------APVELVARVNFLGLRHLTEALLPRMAP--GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVA  132 (241)
T ss_pred             -------CCHHHhhhhchHHHHHHHHHHHHhccC--CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCC
Confidence                   237899999999999999999998853  489999999987631                         1456


Q ss_pred             CchhchHHHHHHHHHHHHHH-HHHccCCceEEEeeeeeeeeCCcchh
Q 025260          204 LYSVYAATKAYIDQFSRSLY-VEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~-~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      +...|++||+|+++|+++++ .|++++||+||+|+||++.|+|.++.
T Consensus       133 ~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~  179 (241)
T PRK12428        133 LATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDF  179 (241)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccc
Confidence            67899999999999999999 99999999999999999999997653

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.90  E-value=1.8e-22  Score=158.39  Aligned_cols=173  Identities=18%  Similarity=0.249  Sum_probs=136.3

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHH---HHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDV---SDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      |+++||||++|||++++++|+++|+ .|++.+|+++..++.   .+++++.  ..++..+.+|+++.  +++.++.+.+.
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL--GAEVTVVACDVADRAALAAALAAIPAR   78 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999997 688888876554332   2344332  34677889999873  34444555554


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++  ++|++|||||....  .+..+.+.+++++.+++|+.+++.+.+++.+    .+.++++++||..+..  +.+....
T Consensus        79 ~~--~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~ii~~ss~~~~~--~~~~~~~  148 (180)
T smart00822       79 LG--PLRGVIHAAGVLDD--GLLANLTPERFAAVLAPKVDGAWNLHELTRD----LPLDFFVLFSSVAGVL--GNPGQAN  148 (180)
T ss_pred             cC--CeeEEEEccccCCc--cccccCCHHHHHHhhchHhHHHHHHHHHhcc----CCcceEEEEccHHHhc--CCCCchh
Confidence            44  46699999998643  4567888899999999999999999999743    4568999999998877  6678899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeee
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLC  242 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~  242 (255)
                      |+++|+++..+++.++.    .|+++..+.||+++
T Consensus       149 y~~sk~~~~~~~~~~~~----~~~~~~~~~~g~~~  179 (180)
T smart00822      149 YAAANAFLDALAAHRRA----RGLPATSINWGAWA  179 (180)
T ss_pred             hHHHHHHHHHHHHHHHh----cCCceEEEeecccc
Confidence            99999999999877654    48889999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.90  E-value=3.1e-22  Score=158.37  Aligned_cols=191  Identities=18%  Similarity=0.204  Sum_probs=162.8

Q ss_pred             ccCCcEEEEECCC--CchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHH
Q 025260           50 RKYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK  125 (255)
Q Consensus        50 ~~~gk~vlITGas--~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~  125 (255)
                      .++||+.||+|-.  ..|+..+|+.|+++|+++..+..++ ++++..+++-+..+.  ...++||++++  ++..+++++
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s--~~v~~cDV~~d~~i~~~f~~i~   79 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGS--DLVLPCDVTNDESIDALFATIK   79 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccC--CeEEecCCCCHHHHHHHHHHHH
Confidence            4679999999976  6999999999999999999999887 677777777665323  46789999874  577888899


Q ss_pred             HHhcCCCccEEEEecCCCC--CcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC
Q 025260          126 EAIEGLDVGVLINNVGISY--PYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP  203 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~--~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~  203 (255)
                      +.++++|  .|||+-|...  ...+.+.+.+.|.+...+++..++...+.|++.|.|  +.+|.++.++-..+..  -.|
T Consensus        80 ~~~g~lD--~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM--~~ggSiltLtYlgs~r--~vP  153 (259)
T COG0623          80 KKWGKLD--GLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLM--NNGGSILTLTYLGSER--VVP  153 (259)
T ss_pred             HhhCccc--EEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhc--CCCCcEEEEEecccee--ecC
Confidence            9888655  9999999876  234567789999999999999999999999999988  4478999999877777  568


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .+...+.+|+|++.-+|-|+.|+.++|||||.|+-|+|+|=-...+
T Consensus       154 nYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI  199 (259)
T COG0623         154 NYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGI  199 (259)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhcc
Confidence            8899999999999999999999999999999999999998544433

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.88  E-value=3.5e-21  Score=166.51  Aligned_cols=167  Identities=19%  Similarity=0.228  Sum_probs=129.6

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcC--CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G--~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      +||+++||||+|+||++++++|+++|  ++|++.+|+..+..+..+++    ....+..+.+|++|.     +.+.+.+.
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Dl~d~-----~~l~~~~~   73 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF----PAPCLRFFIGDVRDK-----ERLTRALR   73 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh----CCCcEEEEEccCCCH-----HHHHHHHh
Confidence            58999999999999999999999987  78999999876544333222    123577889999975     33444444


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhch
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA  209 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~  209 (255)
                      +  +|++||+||....   +..+.+   .++.+++|+.|+.++++++.+    .+.++||++||.....    | ..+|+
T Consensus        74 ~--iD~Vih~Ag~~~~---~~~~~~---~~~~~~~Nv~g~~~ll~aa~~----~~~~~iV~~SS~~~~~----p-~~~Y~  136 (324)
T TIGR03589        74 G--VDYVVHAAALKQV---PAAEYN---PFECIRTNINGAQNVIDAAID----NGVKRVVALSTDKAAN----P-INLYG  136 (324)
T ss_pred             c--CCEEEECcccCCC---chhhcC---HHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeCCCCCC----C-CCHHH
Confidence            3  5699999997532   122333   246899999999999999775    3456899999965433    2 46799


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                      +||++.+.++++++.+.+..|+++++++||.+..|
T Consensus       137 ~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~  171 (324)
T TIGR03589       137 ATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGS  171 (324)
T ss_pred             HHHHHHHHHHHHHHhhccccCcEEEEEeecceeCC
Confidence            99999999999999888888999999999999976

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.87  E-value=1.6e-20  Score=169.65  Aligned_cols=175  Identities=15%  Similarity=0.109  Sum_probs=135.6

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhh-----c--CCceEEEEEEECCCCcHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAK-----Y--AKTQIKSVVVDFSGDLDEGVER  123 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~-----~--~~~~~~~~~~d~~~~~~~~~~~  123 (255)
                      .+||+++||||+||||++++++|+++|++|++++|+.+++++..+++.+.     +  ...++.++.+|+.|.     +.
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~-----es  152 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKP-----DQ  152 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCH-----HH
Confidence            45899999999999999999999999999999999998887776655431     1  123578899999874     34


Q ss_pred             HHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC
Q 025260          124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP  203 (255)
Q Consensus       124 ~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~  203 (255)
                      +.+.+++  +|+||||+|....        ...++...+++|+.|..++++++.+    .+.+|||++||.++... +.+
T Consensus       153 I~~aLgg--iDiVVn~AG~~~~--------~v~d~~~~~~VN~~Gt~nLl~Aa~~----agVgRIV~VSSiga~~~-g~p  217 (576)
T PLN03209        153 IGPALGN--ASVVICCIGASEK--------EVFDVTGPYRIDYLATKNLVDAATV----AKVNHFILVTSLGTNKV-GFP  217 (576)
T ss_pred             HHHHhcC--CCEEEEccccccc--------cccchhhHHHHHHHHHHHHHHHHHH----hCCCEEEEEccchhccc-Ccc
Confidence            5556675  4599999997521        1123677889999999999988654    45679999999876421 222


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      . ..|. +|+++..+.+.+..++...||+++.|+||++.|++.+
T Consensus       218 ~-~~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~  259 (576)
T PLN03209        218 A-AILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDA  259 (576)
T ss_pred             c-cchh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccc
Confidence            2 1244 8888989999999999999999999999999988644

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.87  E-value=1.3e-20  Score=164.68  Aligned_cols=178  Identities=16%  Similarity=0.131  Sum_probs=132.3

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      ++||+++||||+|+||.+++++|+++|++|++++|+.....+..+.+..   ...+..+.+|+++.  +   .+.+.+.+
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~--~---~~~~~~~~   73 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL---AKKIEDHFGDIRDA--A---KLRKAIAE   73 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh---cCCceEEEccCCCH--H---HHHHHHhh
Confidence            3589999999999999999999999999999999987654433333321   23466788999875  2   33333333


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC----------
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP----------  200 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~----------  200 (255)
                      .++|++||+||....      +.+.+++...+++|+.+++++++++.+ +  ...+++|++||...+..+          
T Consensus        74 ~~~d~vih~A~~~~~------~~~~~~~~~~~~~N~~g~~~ll~a~~~-~--~~~~~iv~~SS~~vyg~~~~~~~~~e~~  144 (349)
T TIGR02622        74 FKPEIVFHLAAQPLV------RKSYADPLETFETNVMGTVNLLEAIRA-I--GSVKAVVNVTSDKCYRNDEWVWGYRETD  144 (349)
T ss_pred             cCCCEEEECCccccc------ccchhCHHHHHHHhHHHHHHHHHHHHh-c--CCCCEEEEEechhhhCCCCCCCCCccCC
Confidence            457899999995421      234455678899999999999998743 1  124689999996544210          


Q ss_pred             CCCCchhchHHHHHHHHHHHHHHHHHcc----CCceEEEeeeeeeeeCC
Q 025260          201 SDPLYSVYAATKAYIDQFSRSLYVEYRK----SGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       201 ~~~~~~~Y~asK~al~~~~~~l~~e~~~----~gi~v~~v~Pg~v~T~~  245 (255)
                      +..+..+|+.||.+.+.+++.++.++.+    .|++++.++|+.+-.|.
T Consensus       145 ~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~  193 (349)
T TIGR02622       145 PLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGG  193 (349)
T ss_pred             CCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCC
Confidence            1234578999999999999999988754    48999999999998874

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.85  E-value=7.1e-20  Score=158.30  Aligned_cols=177  Identities=20%  Similarity=0.168  Sum_probs=131.3

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      +||+++||||+|+||++++++|+++|++|++++|+....++............++..+.+|+++.     +.+.+.+.+ 
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-----~~~~~~~~~-   77 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDE-----GSFELAIDG-   77 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCc-----hHHHHHHcC-
Confidence            37999999999999999999999999999999988766544322222111124577888999976     233333443 


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCC----------
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS----------  201 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~----------  201 (255)
                       +|++|||||....      ..+.+.+++.+++|+.++.++++++.+.+   +.++||++||..++..+.          
T Consensus        78 -~d~vih~A~~~~~------~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~~  147 (325)
T PLN02989         78 -CETVFHTASPVAI------TVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAVLAPETKLGPNDVVD  147 (325)
T ss_pred             -CCEEEEeCCCCCC------CCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhheecCCccCCCCCccC
Confidence             5699999996421      22334568899999999999999988753   246899999987654211          


Q ss_pred             -----CC-----CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          202 -----DP-----LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       202 -----~~-----~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                           .|     ....|+.||.+.+.+.+.+.+++   |++++.++|+.+..|...
T Consensus       148 E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~  200 (325)
T PLN02989        148 ETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN---EIDLIVLNPGLVTGPILQ  200 (325)
T ss_pred             cCCCCchhHhcccccchHHHHHHHHHHHHHHHHHc---CCeEEEEcCCceeCCCCC
Confidence                 00     12469999999999998887664   899999999999988754

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.83  E-value=1.8e-19  Score=143.10  Aligned_cols=172  Identities=20%  Similarity=0.261  Sum_probs=127.2

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh---hhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc-
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP---DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE-  129 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-  129 (255)
                      +++||||.+|||..+++.|+++|. +|++++|+.   .+.++..+++++.  +.++.++.+|++|.  +.++++.+.+. 
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~--g~~v~~~~~Dv~d~--~~v~~~~~~~~~   77 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA--GARVEYVQCDVTDP--EAVAAALAQLRQ   77 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT--T-EEEEEE--TTSH--HHHHHHHHTSHT
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC--CCceeeeccCccCH--HHHHHHHHHHHh
Confidence            689999999999999999999986 899999993   3455677777765  56899999999985  34444443332 


Q ss_pred             C-CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          130 G-LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       130 ~-~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      + .+++.+||+||....  .++.+.+.++++.+++..+.|..++.+.+.+    .+-..+|.+||.++..  +.++...|
T Consensus        78 ~~~~i~gVih~ag~~~~--~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~l~~~i~~SSis~~~--G~~gq~~Y  149 (181)
T PF08659_consen   78 RFGPIDGVIHAAGVLAD--APIQDQTPDEFDAVLAPKVRGLWNLHEALEN----RPLDFFILFSSISSLL--GGPGQSAY  149 (181)
T ss_dssp             TSS-EEEEEE---------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TTTSEEEEEEEHHHHT--T-TTBHHH
T ss_pred             ccCCcceeeeeeeeecc--cccccCCHHHHHHHHhhhhhHHHHHHHHhhc----CCCCeEEEECChhHhc--cCcchHhH
Confidence            1 268899999999754  6788999999999999999999999998765    3446799999999988  88999999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeee
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLC  242 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~  242 (255)
                      +++.+.++.|++..+..    |..+.+|..|.++
T Consensus       150 aaAN~~lda~a~~~~~~----g~~~~sI~wg~W~  179 (181)
T PF08659_consen  150 AAANAFLDALARQRRSR----GLPAVSINWGAWD  179 (181)
T ss_dssp             HHHHHHHHHHHHHHHHT----TSEEEEEEE-EBS
T ss_pred             HHHHHHHHHHHHHHHhC----CCCEEEEEccccC
Confidence            99999999998876653    6778889888764

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK06720 hypothetical protein; Provisional

Probab=99.81  E-value=1.2e-18  Score=136.44  Aligned_cols=142  Identities=18%  Similarity=0.227  Sum_probs=110.9

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      +.++||+++||||++|||.++|++|+++|++|++++|+.+.+++..+++.+.+  .+...+.+|+++  ++++.++++.+
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~v~~~~~   89 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLG--GEALFVSYDMEKQGDWQRVISITLN   89 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHH
Confidence            45679999999999999999999999999999999999888887777776433  346678899987  34566677777


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-------CcEEEEECCccccc
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-------KGAIVNIGSGAAIV  198 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-------~g~iv~vsS~~~~~  198 (255)
                      .+++  +|++|||||+... ..++.+.+.++ ++  .+|+.+++..++.+.++|.+++       .||+..+||.+..+
T Consensus        90 ~~G~--iDilVnnAG~~~~-~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (169)
T PRK06720         90 AFSR--IDMLFQNAGLYKI-DSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSF  162 (169)
T ss_pred             HcCC--CCEEEECCCcCCC-CCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccccc
Confidence            7765  5699999998754 24555656555 33  6778888889999999887654       48899999876544

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.80  E-value=1.7e-18  Score=149.38  Aligned_cols=189  Identities=15%  Similarity=0.099  Sum_probs=135.1

Q ss_pred             cCCcEEEEECCCCchHHH--HHHHHHHcCCcEEEEeCChhhHH------------HHHHHHHhhcCCceEEEEEEECCCC
Q 025260           51 KYGSWALVTGPTDGIGKS--FAFQLAKTGLNLVLVGRNPDKLK------------DVSDSIQAKYAKTQIKSVVVDFSGD  116 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~--la~~la~~G~~V~l~~r~~~~~~------------~~~~~~~~~~~~~~~~~~~~d~~~~  116 (255)
                      ..||++||||+++|||.+  +|++| +.|++|+++++..++.+            ...+.+.+.  +.....+.+|++++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~--G~~a~~i~~DVss~  115 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA--GLYAKSINGDAFSD  115 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhc--CCceEEEEcCCCCH
Confidence            447999999999999999  89999 99999999885432211            233333332  33467789999973


Q ss_pred             --cHHHHHHHHHHhcCCCccEEEEecCCCCCcc-------------------cccc-------------cCCHHHHHhHh
Q 025260          117 --LDEGVERIKEAIEGLDVGVLINNVGISYPYA-------------------RFFH-------------EVDQVLLKNLI  162 (255)
Q Consensus       117 --~~~~~~~~~~~~~~~~id~lv~nag~~~~~~-------------------~~~~-------------~~~~~~~~~~~  162 (255)
                        +++.++.+.+.+++  +|+||||+|......                   .+..             ..+.++++.++
T Consensus       116 E~v~~lie~I~e~~G~--IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv  193 (398)
T PRK13656        116 EIKQKVIELIKQDLGQ--VDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTV  193 (398)
T ss_pred             HHHHHHHHHHHHhcCC--CCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHH
Confidence              56777888888875  559999999863211                   0111             23444444443


Q ss_pred             HHhhhHH-----HHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCc--hhchHHHHHHHHHHHHHHHHHccCCceEEE
Q 025260          163 KVNVEGT-----TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY--SVYAATKAYIDQFSRSLYVEYRKSGIDVQC  235 (255)
Q Consensus       163 ~~N~~~~-----~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~--~~Y~asK~al~~~~~~l~~e~~~~gi~v~~  235 (255)
                        +++|.     ..=.+...+.|  ..++++|..|...+..  ..|.|  +.-+.+|++|+.-++.|+.|+++.|+++|+
T Consensus       194 --~vMggedw~~Wi~al~~a~ll--a~g~~~va~TY~G~~~--t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~  267 (398)
T PRK13656        194 --KVMGGEDWELWIDALDEAGVL--AEGAKTVAYSYIGPEL--THPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYV  267 (398)
T ss_pred             --HhhccchHHHHHHHHHhcccc--cCCcEEEEEecCCcce--eecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEE
Confidence              34444     12234445545  3568999999988776  44555  577999999999999999999999999999


Q ss_pred             eeeeeeeeCCcchhh
Q 025260          236 QVLFLLCFYNLNDLV  250 (255)
Q Consensus       236 v~Pg~v~T~~~~~~~  250 (255)
                      +.+|.+.|.-...+.
T Consensus       268 i~~g~~~T~Ass~Ip  282 (398)
T PRK13656        268 SVLKAVVTQASSAIP  282 (398)
T ss_pred             EecCcccchhhhcCC
Confidence            999999998766554

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.80  E-value=2.5e-18  Score=149.60  Aligned_cols=179  Identities=17%  Similarity=0.090  Sum_probs=121.4

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHH-HHHHHHHh--hcCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK-DVSDSIQA--KYAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~-~~~~~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      +++|++|||||+|+||.+++++|+++|++|++++|+.+... +..+++.+  ......+..+.+|++|.     +.+.+.
T Consensus         4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-----~~~~~~   78 (340)
T PLN02653          4 PPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDA-----SSLRRW   78 (340)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCH-----HHHHHH
Confidence            45899999999999999999999999999999998754311 11222211  01123578889999875     233333


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCC-----
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPS-----  201 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~-----  201 (255)
                      +....+|+|||+||....      ..+.+..+..+++|+.|+.++++++.+.+.+++ .-++|++||...+...+     
T Consensus        79 ~~~~~~d~Vih~A~~~~~------~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E  152 (340)
T PLN02653         79 LDDIKPDEVYNLAAQSHV------AVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSE  152 (340)
T ss_pred             HHHcCCCEEEECCcccch------hhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCC
Confidence            333357799999997532      112233467789999999999999988765431 12788998865443211     


Q ss_pred             ---CCCchhchHHHHHHHHHHHHHHHHHcc---CCceEEEeeeee
Q 025260          202 ---DPLYSVYAATKAYIDQFSRSLYVEYRK---SGIDVQCQVLFL  240 (255)
Q Consensus       202 ---~~~~~~Y~asK~al~~~~~~l~~e~~~---~gi~v~~v~Pg~  240 (255)
                         ..+...|+.||.+.+.+++.++.++.-   .++.++.+.|+.
T Consensus       153 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~  197 (340)
T PLN02653        153 TTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRR  197 (340)
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCC
Confidence               113568999999999999999888632   123344455543

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.79  E-value=8.9e-18  Score=145.05  Aligned_cols=177  Identities=20%  Similarity=0.205  Sum_probs=125.9

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      ..||+++||||+|+||.+++++|+++|++|+++.|+.+..+...+.........++..+.+|+++.  +   .+.+.+.+
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~---~~~~~~~~   77 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEE--S---SFEQAIEG   77 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCc--c---hHHHHHhC
Confidence            358999999999999999999999999999999998765443322221111124577888999876  2   33333443


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccc--cCCC------
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV--IPSD------  202 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~--~~~~------  202 (255)
                        +|++||+||....      ... +..++.+++|+.|+.++++++...   .+-+|||++||.++..  .++.      
T Consensus        78 --~d~vih~A~~~~~------~~~-~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~~~~~~~~~~~~~~~  145 (322)
T PLN02986         78 --CDAVFHTASPVFF------TVK-DPQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAAVLFRQPPIEANDVV  145 (322)
T ss_pred             --CCEEEEeCCCcCC------CCC-CchhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhheecCCccCCCCCCc
Confidence              5699999997421      111 123567899999999999986542   1235899999986532  1000      


Q ss_pred             -------C-----CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          203 -------P-----LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       203 -------~-----~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                             |     ....|+.||.+.+.+++.+.++.   |++++.++|+.+-+|...
T Consensus       146 ~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~  199 (322)
T PLN02986        146 DETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN---GIDMVVLNPGFICGPLLQ  199 (322)
T ss_pred             CcccCCChHHhhccccchHHHHHHHHHHHHHHHHHh---CCeEEEEcccceeCCCCC
Confidence                   1     13569999999998888877654   899999999999998643

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.78  E-value=1.2e-17  Score=149.87  Aligned_cols=184  Identities=16%  Similarity=0.086  Sum_probs=128.2

Q ss_pred             cccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhH----------------HHHHHHHHhhcCCceEEEEE
Q 025260           47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL----------------KDVSDSIQAKYAKTQIKSVV  110 (255)
Q Consensus        47 ~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~----------------~~~~~~~~~~~~~~~~~~~~  110 (255)
                      ..-.+++|+++||||+|+||++++++|+++|++|++++|.....                .+..+.+.+. ....+.++.
T Consensus        41 ~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~~v~  119 (442)
T PLN02572         41 SSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV-SGKEIELYV  119 (442)
T ss_pred             CCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHh-hCCcceEEE
Confidence            33457789999999999999999999999999999987532110                0111111111 123577888


Q ss_pred             EECCCCcHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEE
Q 025260          111 VDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVN  190 (255)
Q Consensus       111 ~d~~~~~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~  190 (255)
                      +|++|.  +   .+.+.+.+.++|++||+|+...   .+....+.++++..+++|+.|+.++++++...-   .+.++|+
T Consensus       120 ~Dl~d~--~---~v~~~l~~~~~D~ViHlAa~~~---~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g---v~~~~V~  188 (442)
T PLN02572        120 GDICDF--E---FLSEAFKSFEPDAVVHFGEQRS---APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA---PDCHLVK  188 (442)
T ss_pred             CCCCCH--H---HHHHHHHhCCCCEEEECCCccc---ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC---CCccEEE
Confidence            999875  2   3333333345779999997642   223344556677889999999999999876532   1247999


Q ss_pred             ECCccccccC----------------------CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          191 IGSGAAIVIP----------------------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       191 vsS~~~~~~~----------------------~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                      +||...+..+                      +..+..+|+.||.+.+.+.+..+.+   +|+.+..++|+.+-.|.
T Consensus       189 ~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~~~vyGp~  262 (442)
T PLN02572        189 LGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVR  262 (442)
T ss_pred             EecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEecccccCCC
Confidence            9998655321                      1112357999999998888877665   48999999999998775

>PLN02583 cinnamoyl-CoA reductase

Probab=99.78  E-value=2.4e-17  Score=140.95  Aligned_cols=173  Identities=14%  Similarity=0.081  Sum_probs=123.4

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhh--HHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK--LKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      ++|+++||||+|+||++++++|+++|++|+++.|+.+.  ..+..+++...  ..++..+.+|++|.     +.+.+.+.
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~-----~~~~~~l~   77 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE--EERLKVFDVDPLDY-----HSILDALK   77 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC--CCceEEEEecCCCH-----HHHHHHHc
Confidence            47899999999999999999999999999999986432  22222322211  23577888999975     33445555


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccc-c-CCC-----
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-I-PSD-----  202 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~-~-~~~-----  202 (255)
                      +  .|.++|.++....       .+ ..+++.+++|+.|+.++++++.+.+   +.++||++||.++.. . +..     
T Consensus        78 ~--~d~v~~~~~~~~~-------~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~~~~~~~~~~~~~  144 (297)
T PLN02583         78 G--CSGLFCCFDPPSD-------YP-SYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAVIWRDDNISTQKD  144 (297)
T ss_pred             C--CCEEEEeCccCCc-------cc-ccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHheecccccCCCCCC
Confidence            4  4488887654311       11 2357899999999999999988753   236899999987642 1 000     


Q ss_pred             -----CC--------chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          203 -----PL--------YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       203 -----~~--------~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                           +.        ...|+.||...+.+++.++++.   |+++++++|+.|.+|...
T Consensus       145 ~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---gi~~v~lrp~~v~Gp~~~  199 (297)
T PLN02583        145 VDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDR---GVNMVSINAGLLMGPSLT  199 (297)
T ss_pred             CCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHh---CCcEEEEcCCcccCCCCC
Confidence                 00        0169999999999888776553   899999999999988653

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.78  E-value=1.5e-17  Score=145.55  Aligned_cols=176  Identities=15%  Similarity=0.066  Sum_probs=122.0

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEE-EEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLV-LVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~-l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      |.++||||+|+||.+++++|.++|++++ +.+|..+. ... ..+.......++.++.+|++|.  +.   +.+.+.+.+
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~Dl~d~--~~---~~~~~~~~~   74 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNL-MSLAPVAQSERFAFEKVDICDR--AE---LARVFTEHQ   74 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cch-hhhhhcccCCceEEEECCCcCh--HH---HHHHHhhcC
Confidence            5799999999999999999999998755 45554321 111 1111111123567788999875  22   333333335


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhh---h--CCCcEEEEECCcccccc--------
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGML---K--RKKGAIVNIGSGAAIVI--------  199 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~---~--~~~g~iv~vsS~~~~~~--------  199 (255)
                      +|++||+||....      +.+.+.++..+++|+.++.++++++.+.|.   +  ++..++|++||...+..        
T Consensus        75 ~D~Vih~A~~~~~------~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~  148 (355)
T PRK10217         75 PDCVMHLAAESHV------DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFF  148 (355)
T ss_pred             CCEEEECCcccCc------chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCc
Confidence            7799999997532      223455688999999999999999987531   1  12348999999653321        


Q ss_pred             ---CCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          200 ---PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       200 ---~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                         .+..+...|+.||.+.+.+++.+++++   ++++..++|+.+-.|-
T Consensus       149 ~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~  194 (355)
T PRK10217        149 TETTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPY  194 (355)
T ss_pred             CCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCC
Confidence               012345789999999999999998775   7889999998887765

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.77  E-value=3.2e-17  Score=143.39  Aligned_cols=179  Identities=16%  Similarity=0.110  Sum_probs=128.9

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      ..++++|||||+|+||.+++++|+++|++|++++|+.++.+...+++..   ...+..+.+|+++.     +.+.+.+. 
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~-----~~~~~~~~-   78 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE---GDRLRLFRADLQEE-----GSFDEAVK-   78 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc---CCeEEEEECCCCCH-----HHHHHHHc-
Confidence            4578999999999999999999999999999999987665554444322   34577889999875     23333344 


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHH--HhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCC-------
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLL--KNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS-------  201 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~--~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~-------  201 (255)
                       ++|++||+||...... .....+.+.+  ..+++.|+.++.++++++.+..   +.+++|++||.+.+...+       
T Consensus        79 -~~d~Vih~A~~~~~~~-~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~~  153 (353)
T PLN02896         79 -GCDGVFHVAASMEFDV-SSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TVKRVVFTSSISTLTAKDSNGRWRA  153 (353)
T ss_pred             -CCCEEEECCccccCCc-cccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---CccEEEEEechhhccccccCCCCCC
Confidence             3569999999764311 0112233332  4577888999999999976532   246899999976654110       


Q ss_pred             -------C---------CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          202 -------D---------PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       202 -------~---------~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                             .         +...+|+.||.+.+.+++.+++++   |+++..++|+.+-.|..
T Consensus       154 ~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~  211 (353)
T PLN02896        154 VVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN---GIDLVSVITTTVAGPFL  211 (353)
T ss_pred             ccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCc
Confidence                   0         112379999999999998887664   89999999998888753

>PLN02650 dihydroflavonol-4-reductase

Probab=99.77  E-value=3e-17  Score=143.51  Aligned_cols=175  Identities=18%  Similarity=0.170  Sum_probs=125.5

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .+|++|||||+|.||.+++++|+++|++|++++|+.+...+............++.++..|+++.  +.   +.+.+.  
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~--~~---~~~~~~--   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVE--GS---FDDAIR--   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCCh--hh---HHHHHh--
Confidence            36889999999999999999999999999999998765554332221111123577889999875  22   333333  


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCC--CC------
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS--DP------  203 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~--~~------  203 (255)
                      ++|++||+|+....     ...  +..++.+++|+.++.++++++.+..   ..+++|++||.......+  .+      
T Consensus        77 ~~d~ViH~A~~~~~-----~~~--~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~~~~~~~~~~~~~~E~~  146 (351)
T PLN02650         77 GCTGVFHVATPMDF-----ESK--DPENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAGTVNVEEHQKPVYDEDC  146 (351)
T ss_pred             CCCEEEEeCCCCCC-----CCC--CchhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchhhcccCCCCCCccCccc
Confidence            35699999986421     111  2235678999999999999987642   135899999975433100  00      


Q ss_pred             ------------CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          204 ------------LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       204 ------------~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                                  ...+|+.||.+.+.+++.++.++   |++++.++|+.+.+|..
T Consensus       147 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~Gp~~  198 (351)
T PLN02650        147 WSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAEN---GLDFISIIPTLVVGPFI  198 (351)
T ss_pred             CCchhhhhccccccchHHHHHHHHHHHHHHHHHHc---CCeEEEECCCceECCCC
Confidence                        12379999999999999887764   89999999999999864

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.76  E-value=5.5e-17  Score=141.06  Aligned_cols=173  Identities=19%  Similarity=0.223  Sum_probs=124.3

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      ++++++||||+|+||++++++|+++|++|++++|+.+....... +.......++..+.+|++|.     +.+.+.+++ 
T Consensus         8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~-----~~~~~~~~~-   80 (338)
T PLN00198          8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRALQELGDLKIFGADLTDE-----ESFEAPIAG-   80 (338)
T ss_pred             CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhcCCCCceEEEEcCCCCh-----HHHHHHHhc-
Confidence            37899999999999999999999999999988888654332211 11110012477889999875     233444443 


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC-----------
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP-----------  200 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~-----------  200 (255)
                       +|++||+|+...     ...  .+..+..+++|+.++.++++++.+.   .+.+++|++||.+.+...           
T Consensus        81 -~d~vih~A~~~~-----~~~--~~~~~~~~~~nv~g~~~ll~a~~~~---~~~~~~v~~SS~~~~g~~~~~~~~~~~~E  149 (338)
T PLN00198         81 -CDLVFHVATPVN-----FAS--EDPENDMIKPAIQGVHNVLKACAKA---KSVKRVILTSSAAAVSINKLSGTGLVMNE  149 (338)
T ss_pred             -CCEEEEeCCCCc-----cCC--CChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeecceeeeccCCCCCCceecc
Confidence             569999998531     111  1223567899999999999997653   234689999997755411           


Q ss_pred             -----------CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          201 -----------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       201 -----------~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                                 ..++..+|+.||.+.+.+++.++.++   |+++..++|+.+-.|.
T Consensus       150 ~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~R~~~vyGp~  202 (338)
T PLN00198        150 KNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEEN---NIDLITVIPTLMAGPS  202 (338)
T ss_pred             ccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhc---CceEEEEeCCceECCC
Confidence                       01235579999999999988887663   8999999999998885

>PLN02240 UDP-glucose 4-epimerase

Probab=99.75  E-value=8.7e-17  Score=140.41  Aligned_cols=175  Identities=17%  Similarity=0.169  Sum_probs=120.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhc--CCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKY--AKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      .+++|+++||||+|+||.+++++|+++|++|++++|......+..+++.+..  ....+..+.+|+++.  +   .+.+.
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~---~l~~~   76 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDK--E---ALEKV   76 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCH--H---HHHHH
Confidence            3558999999999999999999999999999999876443332222222211  123467788999875  2   33333


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC-------
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP-------  200 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~-------  200 (255)
                      +...++|++||+||....      ..+.+.+++.+++|+.++.++++++    .+.+.+++|++||...+...       
T Consensus        77 ~~~~~~d~vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~E  146 (352)
T PLN02240         77 FASTRFDAVIHFAGLKAV------GESVAKPLLYYDNNLVGTINLLEVM----AKHGCKKLVFSSSATVYGQPEEVPCTE  146 (352)
T ss_pred             HHhCCCCEEEEccccCCc------cccccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccHHHhCCCCCCCCCC
Confidence            333367799999997532      1122346778999999999998864    33444689999996543210       


Q ss_pred             --CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeee
Q 025260          201 --SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLL  241 (255)
Q Consensus       201 --~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v  241 (255)
                        +..+...|+.||.+.+.+.+.++.+.  .++.+..++|+.+
T Consensus       147 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~~R~~~v  187 (352)
T PLN02240        147 EFPLSATNPYGRTKLFIEEICRDIHASD--PEWKIILLRYFNP  187 (352)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHhc--CCCCEEEEeecCc
Confidence              11235689999999999999887652  3577777776433

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.75  E-value=6.2e-17  Score=141.05  Aligned_cols=161  Identities=20%  Similarity=0.131  Sum_probs=111.4

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhH-HHHHHHHHhh---cCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL-KDVSDSIQAK---YAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~-~~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      |+++||||+|+||.+++++|+++|++|++++|+.+.. .+..+++.+.   .....+..+.+|++|.     +.+.+.+.
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-----~~l~~~~~   75 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDS-----SNLRRIID   75 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCH-----HHHHHHHH
Confidence            6899999999999999999999999999999986421 1111111111   0123577889999975     33444444


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC---------
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------  200 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~---------  200 (255)
                      +.++|++||+|+.....      .+.+.-...+++|+.|+.++++++.+.-.+ +..++|++||...+...         
T Consensus        76 ~~~~d~ViH~Aa~~~~~------~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~  148 (343)
T TIGR01472        76 EIKPTEIYNLAAQSHVK------VSFEIPEYTADVDGIGTLRLLEAVRTLGLI-KSVKFYQASTSELYGKVQEIPQNETT  148 (343)
T ss_pred             hCCCCEEEECCcccccc------hhhhChHHHHHHHHHHHHHHHHHHHHhCCC-cCeeEEEeccHHhhCCCCCCCCCCCC
Confidence            44577999999975321      111223567789999999999998763221 12479999997544311         


Q ss_pred             CCCCchhchHHHHHHHHHHHHHHHHH
Q 025260          201 SDPLYSVYAATKAYIDQFSRSLYVEY  226 (255)
Q Consensus       201 ~~~~~~~Y~asK~al~~~~~~l~~e~  226 (255)
                      +..+..+|+.||.+.+.+++.+++++
T Consensus       149 ~~~p~~~Y~~sK~~~e~~~~~~~~~~  174 (343)
T TIGR01472       149 PFYPRSPYAAAKLYAHWITVNYREAY  174 (343)
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHh
Confidence            11235689999999999999998876

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02214 cinnamoyl-CoA reductase

Probab=99.75  E-value=1.7e-16  Score=138.29  Aligned_cols=169  Identities=22%  Similarity=0.199  Sum_probs=124.2

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH-HHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV-SDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      +++|+++||||+|+||++++++|+++|++|++++|+.+..... .+++..  ...++.++.+|+++.     +.+.+.+.
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~-----~~~~~~~~   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG--GKERLILCKADLQDY-----EALKAAID   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC--CCCcEEEEecCcCCh-----HHHHHHHh
Confidence            5689999999999999999999999999999999987643321 222221  123467788999875     23444444


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC-C-CC----
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP-S-DP----  203 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~-~-~~----  203 (255)
                      +  +|++||+||...           +++++.+++|+.++.++++++..    .+-+++|++||..+.+.. . .+    
T Consensus        81 ~--~d~Vih~A~~~~-----------~~~~~~~~~nv~gt~~ll~aa~~----~~v~r~V~~SS~~avyg~~~~~~~~~~  143 (342)
T PLN02214         81 G--CDGVFHTASPVT-----------DDPEQMVEPAVNGAKFVINAAAE----AKVKRVVITSSIGAVYMDPNRDPEAVV  143 (342)
T ss_pred             c--CCEEEEecCCCC-----------CCHHHHHHHHHHHHHHHHHHHHh----cCCCEEEEeccceeeeccCCCCCCccc
Confidence            3  569999998641           12467789999999999999764    334589999997543311 0 00    


Q ss_pred             -------------CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          204 -------------LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       204 -------------~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                                   ....|+.||.+.+.+++.++.+.   |+++..++|+.+-.|..
T Consensus       144 ~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---g~~~v~lRp~~vyGp~~  196 (342)
T PLN02214        144 DESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK---GVDLVVLNPVLVLGPPL  196 (342)
T ss_pred             CcccCCChhhccccccHHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCC
Confidence                         23479999999999998887664   89999999999988753

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.75  E-value=1.2e-16  Score=142.08  Aligned_cols=174  Identities=21%  Similarity=0.263  Sum_probs=148.0

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      ++||+++||||+|.||+++++++++.+. ++++.+|++.++.+...++++.++..++..+-+|+.|.     +++.+.+.
T Consensus       248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~-----~~~~~~~~  322 (588)
T COG1086         248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDR-----DRVERAME  322 (588)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccH-----HHHHHHHh
Confidence            5699999999999999999999999986 79999999999999999999988888999999999987     77888888


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhch
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA  209 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~  209 (255)
                      +..+|+++|.|+.-+-   |..|..   ..+.+.+|++|+.++++++...-.    .++|.+|+--+..  |   ...|+
T Consensus       323 ~~kvd~VfHAAA~KHV---Pl~E~n---P~Eai~tNV~GT~nv~~aa~~~~V----~~~V~iSTDKAV~--P---tNvmG  387 (588)
T COG1086         323 GHKVDIVFHAAALKHV---PLVEYN---PEEAIKTNVLGTENVAEAAIKNGV----KKFVLISTDKAVN--P---TNVMG  387 (588)
T ss_pred             cCCCceEEEhhhhccC---cchhcC---HHHHHHHhhHhHHHHHHHHHHhCC----CEEEEEecCcccC--C---chHhh
Confidence            7778899999998643   233333   466789999999999999876443    4599999976655  2   47899


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                      +||...+.++.++..+....+-++.+|+=|.|-..
T Consensus       388 aTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGS  422 (588)
T COG1086         388 ATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGS  422 (588)
T ss_pred             HHHHHHHHHHHHHhhccCCCCcEEEEEEecceecC
Confidence            99999999999999887765789999999888653

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.74  E-value=1.4e-16  Score=137.47  Aligned_cols=175  Identities=20%  Similarity=0.177  Sum_probs=123.0

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhh-cCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAK-YAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      +||+++||||+|+||++++++|+++|++|++++|+........ .+... ....++.++.+|+.+.     +.+.+.+.+
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~~~~~   76 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTE-HLLALDGAKERLHLFKANLLEE-----GSFDSVVDG   76 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHH-HHHhccCCCCceEEEeccccCc-----chHHHHHcC
Confidence            4789999999999999999999999999999999865433221 22111 1123577888999875     233344443


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccc--cccCC-------
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA--IVIPS-------  201 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~--~~~~~-------  201 (255)
                        +|++||+|+....      ... +..++.+++|+.++.++++++....   +-.++|++||.++  +...+       
T Consensus        77 --~d~Vih~A~~~~~------~~~-~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~v~~SS~~~~~y~~~~~~~~~~~  144 (322)
T PLN02662         77 --CEGVFHTASPFYH------DVT-DPQAELIDPAVKGTLNVLRSCAKVP---SVKRVVVTSSMAAVAYNGKPLTPDVVV  144 (322)
T ss_pred             --CCEEEEeCCcccC------CCC-ChHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEccCHHHhcCCCcCCCCCCcC
Confidence              5699999987421      111 1124678999999999999976421   3358999999753  21100       


Q ss_pred             ------CCC-----chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          202 ------DPL-----YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       202 ------~~~-----~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                            .|.     ...|+.||.+.+.+++.+.++.   |++++.++|+.+.+|..+
T Consensus       145 ~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lRp~~v~Gp~~~  198 (322)
T PLN02662        145 DETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKEN---GIDMVTINPAMVIGPLLQ  198 (322)
T ss_pred             CcccCCChhHhhcccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCcccCCCCC
Confidence                  011     1479999999998888776554   899999999999988643

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.73  E-value=3.3e-16  Score=130.69  Aligned_cols=170  Identities=22%  Similarity=0.154  Sum_probs=116.7

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .++++++||||+|+||++++++|+++|++|++..|+.++.++...    .  ...+.++.+|+.+..    +.+.+.++.
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~--~~~~~~~~~Dl~d~~----~~l~~~~~~   84 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----Q--DPSLQIVRADVTEGS----DKLVEAIGD   84 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----c--CCceEEEEeeCCCCH----HHHHHHhhc
Confidence            457999999999999999999999999999999999876543221    1  235778889998742    233344421


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc-CCCCCchhch
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI-PSDPLYSVYA  209 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~-~~~~~~~~Y~  209 (255)
                       ++|++|+|+|..... .+         ...+++|..++.++++++    .+++.++||++||...+.. .+.+....|.
T Consensus        85 -~~d~vi~~~g~~~~~-~~---------~~~~~~n~~~~~~ll~a~----~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~  149 (251)
T PLN00141         85 -DSDAVICATGFRRSF-DP---------FAPWKVDNFGTVNLVEAC----RKAGVTRFILVSSILVNGAAMGQILNPAYI  149 (251)
T ss_pred             -CCCEEEECCCCCcCC-CC---------CCceeeehHHHHHHHHHH----HHcCCCEEEEEccccccCCCcccccCcchh
Confidence             466999999864221 11         112467888888888885    3455689999999864431 1222344576


Q ss_pred             HHHHHHHHHHHHHHHH--HccCCceEEEeeeeeeeeCC
Q 025260          210 ATKAYIDQFSRSLYVE--YRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       210 asK~al~~~~~~l~~e--~~~~gi~v~~v~Pg~v~T~~  245 (255)
                      ..|.+...+...++.|  +...|++++.++||++.++.
T Consensus       150 ~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~  187 (251)
T PLN00141        150 FLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDP  187 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCC
Confidence            6666555444444444  46679999999999998764

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.72  E-value=5e-16  Score=134.89  Aligned_cols=172  Identities=17%  Similarity=0.125  Sum_probs=117.5

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG  134 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id  134 (255)
                      .++||||+|+||++++++|+++|++|++++|..+........+.+. ...+...+.+|++|.  +.   +.+.+...++|
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~--~~---~~~~~~~~~~d   75 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERL-GGKHPTFVEGDIRNE--AL---LTEILHDHAID   75 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHh-cCCCceEEEccCCCH--HH---HHHHHhcCCCC
Confidence            5899999999999999999999999999887543333322222221 133456778898875  22   33333333577


Q ss_pred             EEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCC----------CCC
Q 025260          135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS----------DPL  204 (255)
Q Consensus       135 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~----------~~~  204 (255)
                      ++||+||.....  .    ..+.....+++|+.++.++++++    ++.+.+++|++||...+...+          ...
T Consensus        76 ~vvh~a~~~~~~--~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p  145 (338)
T PRK10675         76 TVIHFAGLKAVG--E----SVQKPLEYYDNNVNGTLRLISAM----RAANVKNLIFSSSATVYGDQPKIPYVESFPTGTP  145 (338)
T ss_pred             EEEECCcccccc--c----hhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEeccHHhhCCCCCCccccccCCCCC
Confidence            999999975321  1    11223567899999999988864    344556899999976443110          023


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                      ...|+.+|.+.+.+.+.++++..  ++++..++|+.+-.+
T Consensus       146 ~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~ilR~~~v~g~  183 (338)
T PRK10675        146 QSPYGKSKLMVEQILTDLQKAQP--DWSIALLRYFNPVGA  183 (338)
T ss_pred             CChhHHHHHHHHHHHHHHHHhcC--CCcEEEEEeeeecCC
Confidence            57899999999999999876642  577788887665543

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.71  E-value=4.3e-16  Score=133.62  Aligned_cols=171  Identities=16%  Similarity=0.079  Sum_probs=119.9

Q ss_pred             EEEEECCCCchHHHHHHHHHHcC--CcEEEEeCChhh-HHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDK-LKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G--~~V~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .++||||+|+||.+++++|+++|  .+|++.+|.... ..+..+.+..   ...+.++.+|++|.  +   .+.+.+...
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~--~---~~~~~~~~~   72 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED---NPRYRFVKGDIGDR--E---LVSRLFTEH   72 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc---CCCcEEEEcCCcCH--H---HHHHHHhhc
Confidence            38999999999999999999987  789888764321 1111122211   23467788999875  2   333333333


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC----------C
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP----------S  201 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~----------~  201 (255)
                      ++|++||+|+....      +.+.+..+..+++|+.++..+++++...+.   +.++|++||...+...          +
T Consensus        73 ~~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~i~~Ss~~v~g~~~~~~~~~e~~~  143 (317)
T TIGR01181        73 QPDAVVHFAAESHV------DRSISGPAAFIETNVVGTYTLLEAVRKYWH---EFRFHHISTDEVYGDLEKGDAFTETTP  143 (317)
T ss_pred             CCCEEEEcccccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC---CceEEEeeccceeCCCCCCCCcCCCCC
Confidence            57799999997532      223345677899999999999998765432   3479999986533210          1


Q ss_pred             CCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       202 ~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                      ......|+.+|.+.+.+++.++.+.   ++++..++|+.+-.|.
T Consensus       144 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~i~G~~  184 (317)
T TIGR01181       144 LAPSSPYSASKAASDHLVRAYHRTY---GLPALITRCSNNYGPY  184 (317)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCC
Confidence            1234579999999999999988775   7899999999887664

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.71  E-value=5.6e-16  Score=135.37  Aligned_cols=178  Identities=12%  Similarity=0.046  Sum_probs=126.0

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcC---CceEEEEEEECCCCcHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYA---KTQIKSVVVDFSGDLDEGVERI  124 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~  124 (255)
                      .+.+++|.++||||+|.||.+++++|.++|++|++++|.........++.....+   ..++.++.+|+.|.  +   .+
T Consensus        10 ~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~--~---~l   84 (348)
T PRK15181         10 KLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKF--T---DC   84 (348)
T ss_pred             cccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCH--H---HH
Confidence            4567789999999999999999999999999999999865433322222221111   13467888999874  2   33


Q ss_pred             HHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCC---
Q 025260          125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS---  201 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~---  201 (255)
                      .+.+.  ++|++||.|+.....   .   +.++....+++|+.|+.++++++..    .+-.++|++||...+...+   
T Consensus        85 ~~~~~--~~d~ViHlAa~~~~~---~---~~~~~~~~~~~Nv~gt~nll~~~~~----~~~~~~v~~SS~~vyg~~~~~~  152 (348)
T PRK15181         85 QKACK--NVDYVLHQAALGSVP---R---SLKDPIATNSANIDGFLNMLTAARD----AHVSSFTYAASSSTYGDHPDLP  152 (348)
T ss_pred             HHHhh--CCCEEEECccccCch---h---hhhCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeechHhhCCCCCCC
Confidence            33334  366999999975321   1   1122345789999999999988643    3445899999976544111   


Q ss_pred             ------CCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          202 ------DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       202 ------~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                            ..+..+|+.||.+.+.+++.++.+.   |+++..++|+.+-.|.
T Consensus       153 ~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~vyGp~  199 (348)
T PRK15181        153 KIEERIGRPLSPYAVTKYVNELYADVFARSY---EFNAIGLRYFNVFGRR  199 (348)
T ss_pred             CCCCCCCCCCChhhHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCcC
Confidence                  1124589999999999888876553   8999999999998874

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.71  E-value=6.4e-16  Score=135.02  Aligned_cols=173  Identities=15%  Similarity=0.050  Sum_probs=118.5

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCc-EEEEeCChh--hHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPD--KLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~-V~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .++||||+|+||.+++++|+++|.+ |+..++...  ..+.    .....+..++..+.+|++|.  +   .+.+.+.+.
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~d~--~---~~~~~~~~~   72 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLES----LADVSDSERYVFEHADICDR--A---ELDRIFAQH   72 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHH----HHhcccCCceEEEEecCCCH--H---HHHHHHHhc
Confidence            5899999999999999999999986 554555321  1111    11111234567789999975  2   333333333


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-----CCcEEEEECCccccccC------
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-----KKGAIVNIGSGAAIVIP------  200 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-----~~g~iv~vsS~~~~~~~------  200 (255)
                      ++|++||+||.... .     .+.+..++.+++|+.|+.++++++.+.|...     +..++|++||...+...      
T Consensus        73 ~~d~vih~A~~~~~-~-----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~  146 (352)
T PRK10084         73 QPDAVMHLAAESHV-D-----RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEV  146 (352)
T ss_pred             CCCEEEECCcccCC-c-----chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccc
Confidence            57799999997532 1     1112346789999999999999998765321     22489999996543310      


Q ss_pred             -------------CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          201 -------------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       201 -------------~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                                   +..+...|+.||.+.+.+++.++.++   |+++..+.|+.+-.|.
T Consensus       147 ~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~  201 (352)
T PRK10084        147 ENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPY  201 (352)
T ss_pred             cccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCC
Confidence                         11234689999999999999988775   6777888888777654

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.69  E-value=6.9e-17  Score=135.02  Aligned_cols=168  Identities=21%  Similarity=0.279  Sum_probs=120.9

Q ss_pred             EEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceE----EEEEEECCCCcHHHHHHHHHHhcC
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQI----KSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      ||||||+|.||+++++++++.+. +++++||++.++-+..+++++.+++.++    ..+.+|+.|.     +++.+.+..
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~-----~~l~~~~~~   75 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDK-----ERLNRIFEE   75 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHH-----HHHHHHTT-
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCH-----HHHHHHHhh
Confidence            79999999999999999999985 7999999999999999999766544333    3446677665     677777777


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchH
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA  210 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~a  210 (255)
                      .++|+++|.|+.-..  . +.+..   ..+.+++|+.|+.++++++..+    +-.++|++|+--+..     +...|++
T Consensus        76 ~~pdiVfHaAA~KhV--p-l~E~~---p~eav~tNv~GT~nv~~aa~~~----~v~~~v~ISTDKAv~-----PtnvmGa  140 (293)
T PF02719_consen   76 YKPDIVFHAAALKHV--P-LMEDN---PFEAVKTNVLGTQNVAEAAIEH----GVERFVFISTDKAVN-----PTNVMGA  140 (293)
T ss_dssp             -T-SEEEE------H--H-HHCCC---HHHHHHHHCHHHHHHHHHHHHT----T-SEEEEEEECGCSS-------SHHHH
T ss_pred             cCCCEEEEChhcCCC--C-hHHhC---HHHHHHHHHHHHHHHHHHHHHc----CCCEEEEccccccCC-----CCcHHHH
Confidence            788899999998643  2 23322   3667999999999999998764    345799999976654     2478999


Q ss_pred             HHHHHHHHHHHHHHHHccCCceEEEeeeeeeee
Q 025260          211 TKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCF  243 (255)
Q Consensus       211 sK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T  243 (255)
                      ||...+.++.+.+......+.++.+|+=|.|.-
T Consensus       141 tKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlg  173 (293)
T PF02719_consen  141 TKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLG  173 (293)
T ss_dssp             HHHHHHHHHHHHCCTSSSS--EEEEEEE-EETT
T ss_pred             HHHHHHHHHHHHhhhCCCCCcEEEEEEecceec
Confidence            999999999999988766778999999888764

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.68  E-value=1e-15  Score=131.78  Aligned_cols=170  Identities=18%  Similarity=0.122  Sum_probs=118.1

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG  134 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id  134 (255)
                      .++||||+|+||.+++++|.++|++|++.+|......+...+..+.   ..+..+.+|+++.  +.   +.+.+...++|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~--~~---~~~~~~~~~~d   72 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI---TRVTFVEGDLRDR--EL---LDRLFEEHKID   72 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc---cceEEEECCCCCH--HH---HHHHHHhCCCc
Confidence            3799999999999999999999999998876543322222222211   1466778898875  22   33333334677


Q ss_pred             EEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCC---------CCCc
Q 025260          135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS---------DPLY  205 (255)
Q Consensus       135 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~---------~~~~  205 (255)
                      ++|||||......      +.+...+.++.|+.++..+++++.    +.+.+++|++||...+..+.         ....
T Consensus        73 ~vv~~ag~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~  142 (328)
T TIGR01179        73 AVIHFAGLIAVGE------SVQDPLKYYRNNVVNTLNLLEAMQ----QTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPI  142 (328)
T ss_pred             EEEECccccCcch------hhcCchhhhhhhHHHHHHHHHHHH----hcCCCEEEEecchhhcCCCCCCCccccCCCCCC
Confidence            9999999753211      222345678899999999988753    34456899999865543111         1134


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                      ..|+.+|++.+.+.+.++++.  .++++..++|+.+-.+
T Consensus       143 ~~y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~  179 (328)
T TIGR01179       143 NPYGRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGA  179 (328)
T ss_pred             CchHHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCC
Confidence            679999999999999987662  3789999999877665

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.67  E-value=1.8e-15  Score=130.49  Aligned_cols=162  Identities=20%  Similarity=0.201  Sum_probs=119.3

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      ++++||||+|+||..++++|+++|++|++++|+.+.....    .    ...+..+.+|+.+.     +.+.+.+.+  +
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~----~~~~~~~~~D~~~~-----~~l~~~~~~--~   65 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----E----GLDVEIVEGDLRDP-----ASLRKAVAG--C   65 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----c----cCCceEEEeeCCCH-----HHHHHHHhC--C
Confidence            3689999999999999999999999999999987653221    1    22467889999875     334444443  5


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC--------C--
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD--------P--  203 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~--------~--  203 (255)
                      |++||+|+....     ..   +..++.+++|+.++.++++++..    .+.+++|++||...+...+.        +  
T Consensus        66 d~vi~~a~~~~~-----~~---~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~  133 (328)
T TIGR03466        66 RALFHVAADYRL-----WA---PDPEEMYAANVEGTRNLLRAALE----AGVERVVYTSSVATLGVRGDGTPADETTPSS  133 (328)
T ss_pred             CEEEEeceeccc-----CC---CCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEechhhcCcCCCCCCcCccCCCC
Confidence            699999985321     11   22467789999999999988654    34568999999766542100        0  


Q ss_pred             ---CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          204 ---LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       204 ---~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                         ....|+.+|.+.+.+.+.+..+   .|+++..++|+.+-.+.
T Consensus       134 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~  175 (328)
T TIGR03466       134 LDDMIGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPR  175 (328)
T ss_pred             cccccChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCC
Confidence               1357999999999999988765   38999999999887654

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.66  E-value=5.4e-15  Score=124.88  Aligned_cols=176  Identities=23%  Similarity=0.192  Sum_probs=127.8

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhh-cCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAK-YAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .++.|+||||||.||..++++|+++|++|..+.|+++..+. .+.+.+. +...+...+..|+.|.     +.+.+.+.+
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~-~~~L~~l~~a~~~l~l~~aDL~d~-----~sf~~ai~g   78 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKK-TEHLRKLEGAKERLKLFKADLLDE-----GSFDKAIDG   78 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhh-HHHHHhcccCcccceEEecccccc-----chHHHHHhC
Confidence            57999999999999999999999999999999999987333 2223322 2244589999999987     556666666


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC-CCCC-----
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP-SDPL-----  204 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~-~~~~-----  204 (255)
                      .|  .|+|.|......     ..+.  -.+.++..+.|+.++++++...=   .=.|||++||.++...+ +..+     
T Consensus        79 cd--gVfH~Asp~~~~-----~~~~--e~~li~pav~Gt~nVL~ac~~~~---sVkrvV~TSS~aAv~~~~~~~~~~~vv  146 (327)
T KOG1502|consen   79 CD--GVFHTASPVDFD-----LEDP--EKELIDPAVKGTKNVLEACKKTK---SVKRVVYTSSTAAVRYNGPNIGENSVV  146 (327)
T ss_pred             CC--EEEEeCccCCCC-----CCCc--HHhhhhHHHHHHHHHHHHHhccC---CcceEEEeccHHHhccCCcCCCCCccc
Confidence            56  999999876431     1121  14788999999999999986522   12579999999988732 1110     


Q ss_pred             --------------chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          205 --------------YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       205 --------------~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                                    ...|..||.--+.-+..++.|   .|+....++|+.|-.|...+
T Consensus       147 dE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e---~~~~lv~inP~lV~GP~l~~  201 (327)
T KOG1502|consen  147 DEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKE---NGLDLVTINPGLVFGPGLQP  201 (327)
T ss_pred             ccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHh---CCccEEEecCCceECCCccc
Confidence                          124778886544444444444   36999999999999988766

>PLN02686 cinnamoyl-CoA reductase

Probab=99.66  E-value=5.1e-15  Score=130.16  Aligned_cols=176  Identities=14%  Similarity=0.122  Sum_probs=121.1

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhc----CCceEEEEEEECCCCcHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKY----AKTQIKSVVVDFSGDLDEGVERIKE  126 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~  126 (255)
                      .++|.++||||+|+||.+++++|+++|++|+++.|+.+..++. +++....    ....+..+.+|++|.     +.+.+
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~-----~~l~~  124 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEP-----ESLHE  124 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCH-----HHHHH
Confidence            5689999999999999999999999999999988887655443 2322111    012467788999875     23334


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccc--cc---cCC
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA--IV---IPS  201 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~--~~---~~~  201 (255)
                      .+.+  +|.++|.|+...+..  ....    .+...++|+.+..++++++...   .+-.++|++||..+  +.   ...
T Consensus       125 ~i~~--~d~V~hlA~~~~~~~--~~~~----~~~~~~~nv~gt~~llea~~~~---~~v~r~V~~SS~~~~vyg~~~~~~  193 (367)
T PLN02686        125 AFDG--CAGVFHTSAFVDPAG--LSGY----TKSMAELEAKASENVIEACVRT---ESVRKCVFTSSLLACVWRQNYPHD  193 (367)
T ss_pred             HHHh--ccEEEecCeeecccc--cccc----cchhhhhhHHHHHHHHHHHHhc---CCccEEEEeccHHHhcccccCCCC
Confidence            4443  458999988753311  1011    1234567889998888886431   12347999999631  10   000


Q ss_pred             ----------------CCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          202 ----------------DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       202 ----------------~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                                      ......|+.||.+.+.+++.++.+   +|++++.++|+.+.+|..
T Consensus       194 ~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~  251 (367)
T PLN02686        194 LPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGF  251 (367)
T ss_pred             CCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCC
Confidence                            012346999999999999888766   489999999999999853

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.64  E-value=6.6e-15  Score=121.72  Aligned_cols=160  Identities=19%  Similarity=0.109  Sum_probs=121.0

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      +.+|||||+|.||.+.+.+|++.|++|++.|.......+......       ..++..|+.|.     +.+.+.+.+..|
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~-------~~f~~gDi~D~-----~~L~~vf~~~~i   68 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ-------FKFYEGDLLDR-----ALLTAVFEENKI   68 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc-------CceEEeccccH-----HHHHHHHHhcCC
Confidence            369999999999999999999999999999987776665544321       57889999986     445555555578


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC---------CCCC
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDPL  204 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~---------~~~~  204 (255)
                      |.+||-||...-      ..|.+...+.++.|+.|+..++++    |++.+-.++||-||.+.+..|         +..+
T Consensus        69 daViHFAa~~~V------gESv~~Pl~Yy~NNv~gTl~Ll~a----m~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p  138 (329)
T COG1087          69 DAVVHFAASISV------GESVQNPLKYYDNNVVGTLNLIEA----MLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAP  138 (329)
T ss_pred             CEEEECcccccc------chhhhCHHHHHhhchHhHHHHHHH----HHHhCCCEEEEecchhhcCCCCCcccCCCCCCCC
Confidence            899999997543      225556678899999999999988    455555568888887666532         1223


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeee
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVL  238 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~P  238 (255)
                      ..+|+.||...+.+.+.+++-.   +.++.+++-
T Consensus       139 ~NPYG~sKlm~E~iL~d~~~a~---~~~~v~LRY  169 (329)
T COG1087         139 INPYGRSKLMSEEILRDAAKAN---PFKVVILRY  169 (329)
T ss_pred             CCcchhHHHHHHHHHHHHHHhC---CCcEEEEEe
Confidence            5689999999999999888775   455555543

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.62  E-value=3.6e-14  Score=123.98  Aligned_cols=168  Identities=17%  Similarity=0.153  Sum_probs=116.2

Q ss_pred             EEEEECCCCchHHHHHHHHHHcC--CcEEEEeCChhhH---HHHHHHHHhhcC------CceEEEEEEECCCCc----HH
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKL---KDVSDSIQAKYA------KTQIKSVVVDFSGDL----DE  119 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G--~~V~l~~r~~~~~---~~~~~~~~~~~~------~~~~~~~~~d~~~~~----~~  119 (255)
                      +++||||+|+||++++++|+++|  ++|+++.|+.+..   +...+.+.....      ..++..+.+|++++.    .+
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999999  7899999986532   122222221110      046888899987641    12


Q ss_pred             HHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc
Q 025260          120 GVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI  199 (255)
Q Consensus       120 ~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~  199 (255)
                      ..+   +...  ++|++||||+....      .   ..++...++|+.++..+++.+..    .+..+++++||......
T Consensus        81 ~~~---~~~~--~~d~vih~a~~~~~------~---~~~~~~~~~nv~g~~~ll~~a~~----~~~~~~v~iSS~~v~~~  142 (367)
T TIGR01746        81 EWE---RLAE--NVDTIVHNGALVNW------V---YPYSELRAANVLGTREVLRLAAS----GRAKPLHYVSTISVLAA  142 (367)
T ss_pred             HHH---HHHh--hCCEEEeCCcEecc------C---CcHHHHhhhhhHHHHHHHHHHhh----CCCceEEEEccccccCC
Confidence            222   2223  46699999997532      1   12456678999999998887654    33346999999876542


Q ss_pred             CC--------------CCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          200 PS--------------DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       200 ~~--------------~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                      ..              ......|+.||.+.+.+.+..+.    .|++++.++||.+.++
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~  197 (367)
T TIGR01746       143 IDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGN  197 (367)
T ss_pred             cCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeec
Confidence            10              01134799999999988776543    3899999999999986

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.60  E-value=1.1e-13  Score=116.15  Aligned_cols=184  Identities=18%  Similarity=0.214  Sum_probs=146.2

Q ss_pred             CcEEEEECC-CCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHhc
Q 025260           53 GSWALVTGP-TDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAIE  129 (255)
Q Consensus        53 gk~vlITGa-s~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~  129 (255)
                      .++|+|.|. +.-|++.+|..|-++|+-|+++..+.++.+...++-     ..++.....|..+  +++..+.++.+.+.
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~-----~~dI~~L~ld~~~~~~~~~~l~~f~~~L~   77 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED-----RPDIRPLWLDDSDPSSIHASLSRFASLLS   77 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc-----CCCCCCcccCCCCCcchHHHHHHHHHHhc
Confidence            578999996 799999999999999999999999987655544332     3346666666643  55677777777665


Q ss_pred             CC------------CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC--CCcEEEEEC-Cc
Q 025260          130 GL------------DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR--KKGAIVNIG-SG  194 (255)
Q Consensus       130 ~~------------~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~--~~g~iv~vs-S~  194 (255)
                      ..            .+..+|.-..... ..+|+++++.+.|.+.++.|++.++.+++.++|+++.+  ++.+||.+. |.
T Consensus        78 ~p~~p~~~~~~h~l~L~svi~~Psl~y-p~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi  156 (299)
T PF08643_consen   78 RPHVPFPGAPPHHLQLKSVIFIPSLSY-PTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSI  156 (299)
T ss_pred             CCCCCCCCCCCceeEEEEEEEecCCCC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCch
Confidence            32            3456666666555 35789999999999999999999999999999999772  345555554 66


Q ss_pred             cccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          195 AAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       195 ~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                      .+..  ..|..++-.....++.+|+++|++|+++.||+|..+..|.++-.
T Consensus       157 ~ssl--~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  157 SSSL--NPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             hhcc--CCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence            6666  56788899999999999999999999999999999999998865

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PLN02427 UDP-apiose/xylose synthase

Probab=99.60  E-value=3.7e-14  Score=125.59  Aligned_cols=173  Identities=15%  Similarity=0.113  Sum_probs=117.4

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHc-CCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~-G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      .+.++|+||||+|.||.+++++|+++ |++|++++|+.++.+...+.... .....+.++.+|+.|.     +.+.+.+.
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~-~~~~~~~~~~~Dl~d~-----~~l~~~~~   85 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTV-PWSGRIQFHRINIKHD-----SRLEGLIK   85 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccc-cCCCCeEEEEcCCCCh-----HHHHHHhh
Confidence            34578999999999999999999998 58999999876544322211000 0013578888999875     33444444


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC-------CC
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP-------SD  202 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~-------~~  202 (255)
                      +  +|++||+|+...+.  ... .+   -.+.+..|+.+..++++++..    .+ .++|++||...+...       ..
T Consensus        86 ~--~d~ViHlAa~~~~~--~~~-~~---~~~~~~~n~~gt~~ll~aa~~----~~-~r~v~~SS~~vYg~~~~~~~~e~~  152 (386)
T PLN02427         86 M--ADLTINLAAICTPA--DYN-TR---PLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDH  152 (386)
T ss_pred             c--CCEEEEcccccChh--hhh-hC---hHHHHHHHHHHHHHHHHHHHh----cC-CEEEEEeeeeeeCCCcCCCCCccc
Confidence            3  56999999975321  111 11   133456799999988887642    23 589999997543310       00


Q ss_pred             C------------------------CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          203 P------------------------LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       203 ~------------------------~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                      |                        ....|+.||.+.+.+.+..+..   .|+++..++|+.+-.|.
T Consensus       153 p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~  216 (386)
T PLN02427        153 PLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPR  216 (386)
T ss_pred             ccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCC
Confidence            0                        1236999999999888766544   48999999999998875

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.60  E-value=2.3e-14  Score=118.09  Aligned_cols=170  Identities=18%  Similarity=0.091  Sum_probs=121.7

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCC--cEEEEeCCh-hhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNP-DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      +.+|||||+|.||.++++++.++.-  +|+.+|.-. ....+..+.+.   .+.+..+++.|+.|.  +.+.++   +.+
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~---~~~~~~fv~~DI~D~--~~v~~~---~~~   72 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVE---DSPRYRFVQGDICDR--ELVDRL---FKE   72 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhh---cCCCceEEeccccCH--HHHHHH---HHh
Confidence            4689999999999999999998764  467776532 11222222332   256789999999985  444444   444


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc-----------
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI-----------  199 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~-----------  199 (255)
                      .++|+++|-|+-...      +-|.++.+.-+++|+.|++.+++++..+..+   -|++.+|.-.-+..           
T Consensus        73 ~~~D~VvhfAAESHV------DRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---frf~HISTDEVYG~l~~~~~~FtE~  143 (340)
T COG1088          73 YQPDAVVHFAAESHV------DRSIDGPAPFIQTNVVGTYTLLEAARKYWGK---FRFHHISTDEVYGDLGLDDDAFTET  143 (340)
T ss_pred             cCCCeEEEechhccc------cccccChhhhhhcchHHHHHHHHHHHHhccc---ceEEEeccccccccccCCCCCcccC
Confidence            467799999987643      3355556777899999999999998776532   36888887443331           


Q ss_pred             CCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeee
Q 025260          200 PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCF  243 (255)
Q Consensus       200 ~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T  243 (255)
                      .+..+.++|+|||||-..++++..+.+   |+.++..++..--.
T Consensus       144 tp~~PsSPYSASKAasD~lVray~~TY---glp~~ItrcSNNYG  184 (340)
T COG1088         144 TPYNPSSPYSASKAASDLLVRAYVRTY---GLPATITRCSNNYG  184 (340)
T ss_pred             CCCCCCCCcchhhhhHHHHHHHHHHHc---CCceEEecCCCCcC
Confidence            133457899999999999999999987   78887776654333

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.59  E-value=4.1e-14  Score=116.38  Aligned_cols=165  Identities=21%  Similarity=0.259  Sum_probs=122.5

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCccE
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGV  135 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id~  135 (255)
                      |+||||+|.||.+++++|.++|..|+...|...........       ..+..+.+|+.|.  +.++++.+..   ++|+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~-------~~~~~~~~dl~~~--~~~~~~~~~~---~~d~   68 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK-------LNVEFVIGDLTDK--EQLEKLLEKA---NIDV   68 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH-------TTEEEEESETTSH--HHHHHHHHHH---TESE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc-------ceEEEEEeecccc--cccccccccc---CceE
Confidence            79999999999999999999999988888776654322211       1678889999964  4444444333   6779


Q ss_pred             EEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC-CC--------CCch
Q 025260          136 LINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP-SD--------PLYS  206 (255)
Q Consensus       136 lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~-~~--------~~~~  206 (255)
                      +||+|+....      ..+.+.....++.|+.+..++++++..    .+..++|++||...+..+ +.        ....
T Consensus        69 vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~  138 (236)
T PF01370_consen   69 VIHLAAFSSN------PESFEDPEEIIEANVQGTRNLLEAARE----AGVKRFIFLSSASVYGDPDGEPIDEDSPINPLS  138 (236)
T ss_dssp             EEEEBSSSSH------HHHHHSHHHHHHHHHHHHHHHHHHHHH----HTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSS
T ss_pred             EEEeeccccc------ccccccccccccccccccccccccccc----ccccccccccccccccccccccccccccccccc
Confidence            9999997531      112244577788899888888888654    444689999996554422 11        1346


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                      .|+.+|...+.+.+.+..+.   ++++..++|+.+-.|.
T Consensus       139 ~Y~~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~  174 (236)
T PF01370_consen  139 PYGASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPG  174 (236)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTT
T ss_pred             cccccccccccccccccccc---cccccccccccccccc
Confidence            79999999999999988776   8999999999999887

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.57  E-value=6e-14  Score=118.83  Aligned_cols=169  Identities=20%  Similarity=0.200  Sum_probs=121.9

Q ss_pred             EEECCCCchHHHHHHHHHHcC--CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Q 025260           57 LVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG  134 (255)
Q Consensus        57 lITGas~gIG~~la~~la~~G--~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id  134 (255)
                      |||||+|.||.+++++|.++|  ++|.+.++.+.....  +....   .....++.+|++|.     +.+.+.+.+.  |
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~---~~~~~~~~~Di~d~-----~~l~~a~~g~--d   68 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQK---SGVKEYIQGDITDP-----ESLEEALEGV--D   68 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhc---ccceeEEEeccccH-----HHHHHHhcCC--c
Confidence            699999999999999999999  789998887654321  11111   11223899999986     5666677654  4


Q ss_pred             EEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC--C-----------
Q 025260          135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP--S-----------  201 (255)
Q Consensus       135 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~--~-----------  201 (255)
                      ++||.|+.....    .   ....++.+++|+.|+-++++++..    .+-.++|++||.+.....  +           
T Consensus        69 ~V~H~Aa~~~~~----~---~~~~~~~~~vNV~GT~nvl~aa~~----~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~  137 (280)
T PF01073_consen   69 VVFHTAAPVPPW----G---DYPPEEYYKVNVDGTRNVLEAARK----AGVKRLVYTSSISVVFDNYKGDPIINGDEDTP  137 (280)
T ss_pred             eEEEeCcccccc----C---cccHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcCcceeEeccCCCCcccCCcCCc
Confidence            999999976431    1   233477899999999999998764    345689999999876630  0           


Q ss_pred             --CCCchhchHHHHHHHHHHHHHHH-HHcc-CCceEEEeeeeeeeeCCcch
Q 025260          202 --DPLYSVYAATKAYIDQFSRSLYV-EYRK-SGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       202 --~~~~~~Y~asK~al~~~~~~l~~-e~~~-~gi~v~~v~Pg~v~T~~~~~  248 (255)
                        ......|+.||+..+.++..... ++.. ..++..+|+|..|-.|.-..
T Consensus       138 ~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~  188 (280)
T PF01073_consen  138 YPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQR  188 (280)
T ss_pred             ccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCccccc
Confidence              01245899999999988877654 2221 24889999999998875433

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.56  E-value=1e-13  Score=122.80  Aligned_cols=164  Identities=15%  Similarity=0.103  Sum_probs=112.7

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHH--HHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD--VSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      .++++++||||+|+||++++++|+++|++|++++|+.++.+.  ..++....  ...+..+.+|++|.  +.++++.+..
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~--~~~v~~v~~Dl~d~--~~l~~~~~~~  133 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE--LPGAEVVFGDVTDA--DSLRKVLFSE  133 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhh--cCCceEEEeeCCCH--HHHHHHHHHh
Confidence            457899999999999999999999999999999998765431  11122221  23467889999985  3333333322


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      +. ++|++|||+|....  .     .    ...+++|+.++.++++++.    +.+-+++|++||.....     ....|
T Consensus       134 ~~-~~D~Vi~~aa~~~~--~-----~----~~~~~vn~~~~~~ll~aa~----~~gv~r~V~iSS~~v~~-----p~~~~  192 (390)
T PLN02657        134 GD-PVDVVVSCLASRTG--G-----V----KDSWKIDYQATKNSLDAGR----EVGAKHFVLLSAICVQK-----PLLEF  192 (390)
T ss_pred             CC-CCcEEEECCccCCC--C-----C----ccchhhHHHHHHHHHHHHH----HcCCCEEEEEeeccccC-----cchHH
Confidence            21 46799999985321  1     1    1235678888877777753    45557899999976543     24568


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                      ..+|...+...+.     ...+++...++|+.+-.+
T Consensus       193 ~~sK~~~E~~l~~-----~~~gl~~tIlRp~~~~~~  223 (390)
T PLN02657        193 QRAKLKFEAELQA-----LDSDFTYSIVRPTAFFKS  223 (390)
T ss_pred             HHHHHHHHHHHHh-----ccCCCCEEEEccHHHhcc
Confidence            8899888775543     235899999999776544

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.56  E-value=1.2e-13  Score=130.45  Aligned_cols=173  Identities=16%  Similarity=0.079  Sum_probs=119.5

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHc--CCcEEEEeCCh--hhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKT--GLNLVLVGRNP--DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKE  126 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~--G~~V~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  126 (255)
                      .++|+|+||||+|.||++++++|.++  |++|+..+|..  +....    +........+.++.+|++|.  +.++.   
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~----l~~~~~~~~v~~~~~Dl~d~--~~~~~---   74 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKN----LNPSKSSPNFKFVKGDIASA--DLVNY---   74 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhh----hhhcccCCCeEEEECCCCCh--HHHHH---
Confidence            34789999999999999999999998  67899888753  12211    11111123577888999875  32322   


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccC-----
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIP-----  200 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~-----  200 (255)
                      .+...++|++||+|+.....      .+.+.....+++|+.++.++++++..    .+ -.++|++||...+..+     
T Consensus        75 ~~~~~~~D~ViHlAa~~~~~------~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~vkr~I~~SS~~vyg~~~~~~~  144 (668)
T PLN02260         75 LLITEGIDTIMHFAAQTHVD------NSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDAD  144 (668)
T ss_pred             HHhhcCCCEEEECCCccCch------hhhhCHHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEcchHHhCCCccccc
Confidence            22223577999999975321      11222346678999999999888643    22 3689999997544311     


Q ss_pred             -------CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          201 -------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       201 -------~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                             +......|+.||.+.+.+.+.+..++   ++++..++|+.+-.|-
T Consensus       145 ~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~---~l~~vilR~~~VyGp~  193 (668)
T PLN02260        145 VGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPN  193 (668)
T ss_pred             cCccccCCCCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECcccccCcC
Confidence                   01124579999999999998877664   7899999999887654

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.56  E-value=1.3e-13  Score=123.78  Aligned_cols=166  Identities=14%  Similarity=0.106  Sum_probs=115.8

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .+++.|+||||+|.||.+++++|.++|++|++++|......+..   .......++..++.|+.+.   .       +. 
T Consensus       117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~---~~~~~~~~~~~i~~D~~~~---~-------l~-  182 (442)
T PLN02206        117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENV---MHHFSNPNFELIRHDVVEP---I-------LL-  182 (442)
T ss_pred             cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhh---hhhccCCceEEEECCccCh---h-------hc-
Confidence            45789999999999999999999999999999987643322211   1111233466677777653   1       11 


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC----------
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP----------  200 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~----------  200 (255)
                       ++|+|||.|+...+.   ..+   ++.+..+++|+.++.++++++..    .+ .++|++||...+..+          
T Consensus       183 -~~D~ViHlAa~~~~~---~~~---~~p~~~~~~Nv~gt~nLleaa~~----~g-~r~V~~SS~~VYg~~~~~p~~E~~~  250 (442)
T PLN02206        183 -EVDQIYHLACPASPV---HYK---FNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQVETYW  250 (442)
T ss_pred             -CCCEEEEeeeecchh---hhh---cCHHHHHHHHHHHHHHHHHHHHH----hC-CEEEEECChHHhCCCCCCCCCcccc
Confidence             367999999875321   111   12356789999999999988653    33 389999997654311          


Q ss_pred             ----CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          201 ----SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       201 ----~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                          +......|+.||.+.+.+++.+.++.   |+++..++|+.+-.|.
T Consensus       251 ~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~---g~~~~ilR~~~vyGp~  296 (442)
T PLN02206        251 GNVNPIGVRSCYDEGKRTAETLTMDYHRGA---NVEVRIARIFNTYGPR  296 (442)
T ss_pred             ccCCCCCccchHHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCC
Confidence                11124579999999998888776553   7899999988777654

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.56  E-value=1.7e-13  Score=129.08  Aligned_cols=168  Identities=15%  Similarity=0.160  Sum_probs=120.1

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHc-CCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~-G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      .+++.|+||||+|.||.+++++|+++ |++|+.++|+.......       .....+.++.+|++|.. +   .+.+.+.
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~-------~~~~~~~~~~gDl~d~~-~---~l~~~l~  381 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF-------LGHPRFHFVEGDISIHS-E---WIEYHIK  381 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh-------cCCCceEEEeccccCcH-H---HHHHHhc
Confidence            55899999999999999999999986 79999999976543211       11235777889998741 1   1233344


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCC-------C
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS-------D  202 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~-------~  202 (255)
                        ++|++||.|+...+..  . .   +..+..+++|+.++.++++++..    .+ .++|++||...+....       .
T Consensus       382 --~~D~ViHlAa~~~~~~--~-~---~~~~~~~~~Nv~~t~~ll~a~~~----~~-~~~V~~SS~~vyg~~~~~~~~E~~  448 (660)
T PRK08125        382 --KCDVVLPLVAIATPIE--Y-T---RNPLRVFELDFEENLKIIRYCVK----YN-KRIIFPSTSEVYGMCTDKYFDEDT  448 (660)
T ss_pred             --CCCEEEECccccCchh--h-c---cCHHHHHHhhHHHHHHHHHHHHh----cC-CeEEEEcchhhcCCCCCCCcCccc
Confidence              4669999999764311  1 1   12345788999999999988764    23 5799999975443100       0


Q ss_pred             ------C---CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          203 ------P---LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       203 ------~---~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                            |   ....|+.||.+.+.+.+.+++++   |+++..++|+.+-.|.
T Consensus       449 ~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~---g~~~~ilR~~~vyGp~  497 (660)
T PRK08125        449 SNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKE---GLRFTLFRPFNWMGPR  497 (660)
T ss_pred             cccccCCCCCCccchHHHHHHHHHHHHHHHHhc---CCceEEEEEceeeCCC
Confidence                  1   12469999999999998887664   7999999999998775

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.55  E-value=2.2e-13  Score=118.94  Aligned_cols=165  Identities=15%  Similarity=0.157  Sum_probs=115.1

Q ss_pred             cEEEEECCCCchHHHHHHHHHHc-CCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~-G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      ++++||||+|.||.+++++|.++ |++|++++|+.+....    +   .+...+.++.+|+.++. +   .+.+.+.  +
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~---~~~~~~~~~~~Dl~~~~-~---~~~~~~~--~   68 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----L---VNHPRMHFFEGDITINK-E---WIEYHVK--K   68 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----h---ccCCCeEEEeCCCCCCH-H---HHHHHHc--C
Confidence            46999999999999999999986 6999999987643321    1   11235778889997431 2   2333334  3


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCC-------C---
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS-------D---  202 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~-------~---  202 (255)
                      +|++||+|+...+..      ..++.+..+++|+.++.++++++..    .+ .++|++||...+....       .   
T Consensus        69 ~d~ViH~aa~~~~~~------~~~~p~~~~~~n~~~~~~ll~aa~~----~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~  137 (347)
T PRK11908         69 CDVILPLVAIATPAT------YVKQPLRVFELDFEANLPIVRSAVK----YG-KHLVFPSTSEVYGMCPDEEFDPEASPL  137 (347)
T ss_pred             CCEEEECcccCChHH------hhcCcHHHHHHHHHHHHHHHHHHHh----cC-CeEEEEecceeeccCCCcCcCcccccc
Confidence            669999999754311      1122356679999999998888653    33 5899999975443100       0   


Q ss_pred             ------CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          203 ------PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       203 ------~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                            .....|+.||.+.+...+.++.+   .|+.+..++|+.+-.|.
T Consensus       138 ~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp~  183 (347)
T PRK11908        138 VYGPINKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGPG  183 (347)
T ss_pred             ccCcCCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCCC
Confidence                  11237999999999988887755   37899999999887765

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.53  E-value=4.1e-13  Score=115.04  Aligned_cols=165  Identities=21%  Similarity=0.199  Sum_probs=118.9

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG  134 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id  134 (255)
                      .+|||||+|.||.+++++|.++|++|+.++|...+.....         ..+..+.+|+++.     +.+.+...... |
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~d~~~~-----~~~~~~~~~~~-d   66 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL---------SGVEFVVLDLTDR-----DLVDELAKGVP-D   66 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc---------cccceeeecccch-----HHHHHHHhcCC-C
Confidence            3999999999999999999999999999999877644321         2456677777765     23333333331 6


Q ss_pred             EEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC------------CC
Q 025260          135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP------------SD  202 (255)
Q Consensus       135 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~------------~~  202 (255)
                      ++||+|+......    .... .....+++|+.++.++++++..    .+..++|+.||......+            ..
T Consensus        67 ~vih~aa~~~~~~----~~~~-~~~~~~~~nv~gt~~ll~aa~~----~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~  137 (314)
T COG0451          67 AVIHLAAQSSVPD----SNAS-DPAEFLDVNVDGTLNLLEAARA----AGVKRFVFASSVSVVYGDPPPLPIDEDLGPPR  137 (314)
T ss_pred             EEEEccccCchhh----hhhh-CHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCCCceECCCCCCCCcccccCCCC
Confidence            9999999865311    1111 3456889999999999999755    455689997775544421            11


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      |.. +|+.||.+.+..++....   ..|+.+..++|+.+-.|...
T Consensus       138 p~~-~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~  178 (314)
T COG0451         138 PLN-PYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDK  178 (314)
T ss_pred             CCC-HHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCC
Confidence            222 599999999999999888   35899999999988866543

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.53  E-value=3.6e-13  Score=120.73  Aligned_cols=166  Identities=14%  Similarity=0.084  Sum_probs=115.2

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .+.++++||||+|.||.+++++|.++|++|++++|......+......   ...++..+..|+.+..          +. 
T Consensus       118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~---~~~~~~~~~~Di~~~~----------~~-  183 (436)
T PLN02166        118 RKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF---GNPRFELIRHDVVEPI----------LL-  183 (436)
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc---cCCceEEEECcccccc----------cc-
Confidence            446889999999999999999999999999999986433222211111   1234566667765431          11 


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC----------
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP----------  200 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~----------  200 (255)
                       ++|+|||.|+......   .+.   +.+..+++|+.++.++++++..    .+ .++|++||...+..+          
T Consensus       184 -~~D~ViHlAa~~~~~~---~~~---~p~~~~~~Nv~gT~nLleaa~~----~g-~r~V~~SS~~VYg~~~~~p~~E~~~  251 (436)
T PLN02166        184 -EVDQIYHLACPASPVH---YKY---NPVKTIKTNVMGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLEHPQKETYW  251 (436)
T ss_pred             -CCCEEEECceeccchh---hcc---CHHHHHHHHHHHHHHHHHHHHH----hC-CEEEEECcHHHhCCCCCCCCCcccc
Confidence             4679999998753211   111   2356789999999999988654    22 479999997654321          


Q ss_pred             ----CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          201 ----SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       201 ----~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                          +......|+.||.+.+.+++...+..   |+++..++|+.+-.|.
T Consensus       252 ~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~---~l~~~ilR~~~vYGp~  297 (436)
T PLN02166        252 GNVNPIGERSCYDEGKRTAETLAMDYHRGA---GVEVRIARIFNTYGPR  297 (436)
T ss_pred             ccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCCeEEEEEccccCCC
Confidence                11123569999999999888776553   7899999998777764

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.52  E-value=2.5e-13  Score=116.51  Aligned_cols=162  Identities=19%  Similarity=0.169  Sum_probs=105.1

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcCCCc
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGLDV  133 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~~i  133 (255)
                      ++||||+|.||++++++|+++|++++++.|+....... ..           ...+|+.|.  .++..+.+.+.....++
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~~-----------~~~~~~~d~~~~~~~~~~~~~~~~~~~~   69 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-VN-----------LVDLDIADYMDKEDFLAQIMAGDDFGDI   69 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-Hh-----------hhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence            79999999999999999999999776665554322110 01           112344432  11222222110011257


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCC---------CCC
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS---------DPL  204 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~---------~~~  204 (255)
                      |++||+||....  .   +.+.   +..++.|+.++.++++++..    .+ .++|++||...+..+.         ..+
T Consensus        70 d~Vih~A~~~~~--~---~~~~---~~~~~~n~~~t~~ll~~~~~----~~-~~~i~~SS~~vyg~~~~~~~~E~~~~~p  136 (308)
T PRK11150         70 EAIFHEGACSST--T---EWDG---KYMMDNNYQYSKELLHYCLE----RE-IPFLYASSAATYGGRTDDFIEEREYEKP  136 (308)
T ss_pred             cEEEECceecCC--c---CCCh---HHHHHHHHHHHHHHHHHHHH----cC-CcEEEEcchHHhCcCCCCCCccCCCCCC
Confidence            799999986432  1   1122   34689999999999888643    33 3799999976544211         123


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                      ...|+.||.+.+.+.+.+..+   .++++..++|+.+-.|.
T Consensus       137 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~  174 (308)
T PRK11150        137 LNVYGYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGPR  174 (308)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCCC
Confidence            467999999999988877655   37899999998888764

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.51  E-value=3.2e-13  Score=114.57  Aligned_cols=144  Identities=16%  Similarity=0.171  Sum_probs=104.6

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCccE
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGV  135 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id~  135 (255)
                      ++||||+|.||.+++++|.++|++|++++|.                       .+|+.+.     +.+.+.+.+.++|+
T Consensus         2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~-----~~~~~~~~~~~~d~   53 (287)
T TIGR01214         2 ILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDP-----EALERLLRAIRPDA   53 (287)
T ss_pred             EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCH-----HHHHHHHHhCCCCE
Confidence            7999999999999999999999999999885                       2466554     34444455556789


Q ss_pred             EEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC---------CCCCch
Q 025260          136 LINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDPLYS  206 (255)
Q Consensus       136 lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~---------~~~~~~  206 (255)
                      +||+||.....      ......+..+++|+.++.++++++..    .+ .++|++||...+...         +.....
T Consensus        54 vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~  122 (287)
T TIGR01214        54 VVNTAAYTDVD------GAESDPEKAFAVNALAPQNLARAAAR----HG-ARLVHISTDYVFDGEGKRPYREDDATNPLN  122 (287)
T ss_pred             EEECCcccccc------ccccCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEeeeeeecCCCCCCCCCCCCCCCcc
Confidence            99999975321      11122456789999999999988643    23 489999996543210         011246


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                      .|+.+|.+.+.+.+.+       +.++..++|+.+-.+.
T Consensus       123 ~Y~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~  154 (287)
T TIGR01214       123 VYGQSKLAGEQAIRAA-------GPNALIVRTSWLYGGG  154 (287)
T ss_pred             hhhHHHHHHHHHHHHh-------CCCeEEEEeeecccCC
Confidence            8999999988777654       4588999999998765

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.51  E-value=6.6e-13  Score=116.95  Aligned_cols=171  Identities=11%  Similarity=-0.000  Sum_probs=117.5

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      .+-.+++.++||||+|.||.+++++|.++|++|++++|.......      ..  ......+..|+++.     +.+.+.
T Consensus        16 ~~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~------~~--~~~~~~~~~Dl~d~-----~~~~~~   82 (370)
T PLN02695         16 YWPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMS------ED--MFCHEFHLVDLRVM-----ENCLKV   82 (370)
T ss_pred             CCCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccc------cc--cccceEEECCCCCH-----HHHHHH
Confidence            344568999999999999999999999999999999986432110      00  11234567788764     233333


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC-------
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP-------  200 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~-------  200 (255)
                      +.  ++|++||.|+..... . .....   ....++.|+.++.++++++.    +.+-.++|++||...+...       
T Consensus        83 ~~--~~D~Vih~Aa~~~~~-~-~~~~~---~~~~~~~N~~~t~nll~aa~----~~~vk~~V~~SS~~vYg~~~~~~~~~  151 (370)
T PLN02695         83 TK--GVDHVFNLAADMGGM-G-FIQSN---HSVIMYNNTMISFNMLEAAR----INGVKRFFYASSACIYPEFKQLETNV  151 (370)
T ss_pred             Hh--CCCEEEEcccccCCc-c-ccccC---chhhHHHHHHHHHHHHHHHH----HhCCCEEEEeCchhhcCCccccCcCC
Confidence            33  356999999864321 1 11111   23456789999999988864    3344589999997533210       


Q ss_pred             --------CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          201 --------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       201 --------~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                              +..+...|+.+|.+.+.+++..+..   .|+++..++|+.+-.|.
T Consensus       152 ~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~  201 (370)
T PLN02695        152 SLKESDAWPAEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNIYGPF  201 (370)
T ss_pred             CcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCccCCC
Confidence                    1223568999999999999887665   38999999999888874

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.51  E-value=3.7e-13  Score=112.45  Aligned_cols=160  Identities=18%  Similarity=0.218  Sum_probs=121.0

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcC-CceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYA-KTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      +++||||||+|.||.+.+.+|.++|+.|+++|.-.....+..+..++... ...+.++..|+.|.  +.++++.+.   .
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~--~~L~kvF~~---~   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDA--EALEKLFSE---V   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCH--HHHHHHHhh---c
Confidence            68899999999999999999999999999999655554555555544332 46799999999986  555555544   4


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC---------CC
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SD  202 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~---------~~  202 (255)
                      .+|.|+|-|+.....      .+.+...+..+.|+.|+++++..    |++.+-..+|+.||...+..|         +.
T Consensus        77 ~fd~V~Hfa~~~~vg------eS~~~p~~Y~~nNi~gtlnlLe~----~~~~~~~~~V~sssatvYG~p~~ip~te~~~t  146 (343)
T KOG1371|consen   77 KFDAVMHFAALAAVG------ESMENPLSYYHNNIAGTLNLLEV----MKAHNVKALVFSSSATVYGLPTKVPITEEDPT  146 (343)
T ss_pred             CCceEEeehhhhccc------hhhhCchhheehhhhhHHHHHHH----HHHcCCceEEEecceeeecCcceeeccCcCCC
Confidence            477999999976431      13344577889999999999888    555566779999987766532         11


Q ss_pred             C-CchhchHHHHHHHHHHHHHHHHHc
Q 025260          203 P-LYSVYAATKAYIDQFSRSLYVEYR  227 (255)
Q Consensus       203 ~-~~~~Y~asK~al~~~~~~l~~e~~  227 (255)
                      . +..+|+.+|.+++...+....-+.
T Consensus       147 ~~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  147 DQPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             CCCCCcchhhhHHHHHHHHhhhcccc
Confidence            1 467899999999999998887764

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.51  E-value=3.2e-13  Score=115.55  Aligned_cols=150  Identities=15%  Similarity=0.173  Sum_probs=105.5

Q ss_pred             EEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCccEE
Q 025260           57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVL  136 (255)
Q Consensus        57 lITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id~l  136 (255)
                      |||||+|.||.+++++|.++|++|+++.+.                      ..+|+++.     +.+.+.+...++|++
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------------~~~Dl~~~-----~~l~~~~~~~~~d~V   53 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------------KELDLTRQ-----ADVEAFFAKEKPTYV   53 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------------ccCCCCCH-----HHHHHHHhccCCCEE
Confidence            699999999999999999999988766432                      13677764     234444444467799


Q ss_pred             EEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc--------------CCC
Q 025260          137 INNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI--------------PSD  202 (255)
Q Consensus       137 v~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~--------------~~~  202 (255)
                      ||+|+.....   ...  .+..+..+++|+.++..+++++..    .+-+++|++||..-+..              +..
T Consensus        54 ih~A~~~~~~---~~~--~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~  124 (306)
T PLN02725         54 ILAAAKVGGI---HAN--MTYPADFIRENLQIQTNVIDAAYR----HGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPE  124 (306)
T ss_pred             EEeeeeeccc---chh--hhCcHHHHHHHhHHHHHHHHHHHH----cCCCeEEEeCceeecCCCCCCCCCHHHhccCCCC
Confidence            9999974210   001  111245678899999999888653    34468999999754331              111


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                      |....|+.||.+.+.+.+.+.++.   ++++..++|+.+-.|.
T Consensus       125 p~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~  164 (306)
T PLN02725        125 PTNEWYAIAKIAGIKMCQAYRIQY---GWDAISGMPTNLYGPH  164 (306)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCC
Confidence            222359999999998888877664   7899999999988774

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.49  E-value=9.3e-13  Score=113.07  Aligned_cols=163  Identities=13%  Similarity=0.136  Sum_probs=107.8

Q ss_pred             EEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH-hcCCCc
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA-IEGLDV  133 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~~~~i  133 (255)
                      ++||||+|.||.+++++|.++|+ .|++++|..... .. .++.     .  ..+..|+.+.  +..+.+.+. +.  ++
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~~-----~--~~~~~d~~~~--~~~~~~~~~~~~--~~   67 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF-LNLA-----D--LVIADYIDKE--DFLDRLEKGAFG--KI   67 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh-hhhh-----h--eeeeccCcch--hHHHHHHhhccC--CC
Confidence            68999999999999999999998 688887764321 11 1111     1  1233444432  344444431 22  57


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC---------CCCC
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDPL  204 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~---------~~~~  204 (255)
                      |++||+|+....        +.++.+..+++|+.++.++++++..    ++ .++|++||...+...         +..+
T Consensus        68 D~vvh~A~~~~~--------~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~v~~SS~~vy~~~~~~~~e~~~~~~p  134 (314)
T TIGR02197        68 EAIFHQGACSDT--------TETDGEYMMENNYQYSKRLLDWCAE----KG-IPFIYASSAATYGDGEAGFREGRELERP  134 (314)
T ss_pred             CEEEECccccCc--------cccchHHHHHHHHHHHHHHHHHHHH----hC-CcEEEEccHHhcCCCCCCcccccCcCCC
Confidence            799999996421        1223466789999999999988653    23 479999997644311         0113


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                      ...|+.||.+.+.+++....+. ..++++..++|+.+-.|.
T Consensus       135 ~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~~  174 (314)
T TIGR02197       135 LNVYGYSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGPR  174 (314)
T ss_pred             CCHHHHHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCCC
Confidence            5689999999999887633222 225788899998877764

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.46  E-value=9e-13  Score=112.82  Aligned_cols=148  Identities=16%  Similarity=0.103  Sum_probs=101.5

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG  134 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id  134 (255)
                      ++|||||+|.||.+++++|.++| +|+.++|...                   .+..|++|.     +.+.+.+.+.++|
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------------~~~~Dl~d~-----~~~~~~~~~~~~D   56 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------------DYCGDFSNP-----EGVAETVRKIRPD   56 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------------cccCCCCCH-----HHHHHHHHhcCCC
Confidence            59999999999999999999999 8988887521                   124577764     2333444444577


Q ss_pred             EEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC---------CCCCc
Q 025260          135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDPLY  205 (255)
Q Consensus       135 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~---------~~~~~  205 (255)
                      ++||+|+.....      ...++-+..+++|+.++.++++++..    .+ .++|++||...+...         +..+.
T Consensus        57 ~Vih~Aa~~~~~------~~~~~~~~~~~~N~~~~~~l~~aa~~----~g-~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~  125 (299)
T PRK09987         57 VIVNAAAHTAVD------KAESEPEFAQLLNATSVEAIAKAANE----VG-AWVVHYSTDYVFPGTGDIPWQETDATAPL  125 (299)
T ss_pred             EEEECCccCCcc------hhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEccceEECCCCCCCcCCCCCCCCC
Confidence            999999976431      11122356678999999999988654    22 479999986543211         11234


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                      ..|+.||.+.+.+.+....       +...++|+++-.|.
T Consensus       126 ~~Yg~sK~~~E~~~~~~~~-------~~~ilR~~~vyGp~  158 (299)
T PRK09987        126 NVYGETKLAGEKALQEHCA-------KHLIFRTSWVYAGK  158 (299)
T ss_pred             CHHHHHHHHHHHHHHHhCC-------CEEEEecceecCCC
Confidence            5799999999888765432       34777777777653

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.45  E-value=2.8e-12  Score=106.95  Aligned_cols=166  Identities=19%  Similarity=0.188  Sum_probs=100.4

Q ss_pred             EECCCCchHHHHHHHHHHcCC--cEEEEeCChhh---HHHHHHHHHhh-----c---CCceEEEEEEECCCCc----HHH
Q 025260           58 VTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDK---LKDVSDSIQAK-----Y---AKTQIKSVVVDFSGDL----DEG  120 (255)
Q Consensus        58 ITGas~gIG~~la~~la~~G~--~V~l~~r~~~~---~~~~~~~~~~~-----~---~~~~~~~~~~d~~~~~----~~~  120 (255)
                      ||||+|.+|..+..+|++++.  +|++..|..+.   .+...+.+.+.     .   ...++.++..|++++-    ++.
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  89999998643   12221221111     0   1568999999999742    233


Q ss_pred             HHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC
Q 025260          121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP  200 (255)
Q Consensus       121 ~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~  200 (255)
                      .+.+.+     ++|++||||+...-.    .     ..++..++|+.|+..+++.+..    .+..+++++||.......
T Consensus        81 ~~~L~~-----~v~~IiH~Aa~v~~~----~-----~~~~~~~~NV~gt~~ll~la~~----~~~~~~~~iSTa~v~~~~  142 (249)
T PF07993_consen   81 YQELAE-----EVDVIIHCAASVNFN----A-----PYSELRAVNVDGTRNLLRLAAQ----GKRKRFHYISTAYVAGSR  142 (249)
T ss_dssp             HHHHHH-----H--EEEE--SS-SBS----------S--EEHHHHHHHHHHHHHHHTS----SS---EEEEEEGGGTTS-
T ss_pred             hhcccc-----ccceeeecchhhhhc----c-----cchhhhhhHHHHHHHHHHHHHh----ccCcceEEeccccccCCC
Confidence            344433     466999999976421    1     2355788999999999998763    233389999993221110


Q ss_pred             C------------------CCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          201 S------------------DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       201 ~------------------~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                      .                  ......|..||+.-+.+.+..+.+.   |+.+..++||.|-..
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~---g~p~~I~Rp~~i~g~  201 (249)
T PF07993_consen  143 PGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRH---GLPVTIYRPGIIVGD  201 (249)
T ss_dssp             TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH------EEEEEE-EEE-S
T ss_pred             CCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcC---CceEEEEecCccccc
Confidence            1                  1223579999999999998888764   789999999999873

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.41  E-value=1e-11  Score=93.89  Aligned_cols=179  Identities=14%  Similarity=0.105  Sum_probs=126.1

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC----CcHHHHHHHHHHh
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG----DLDEGVERIKEAI  128 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~~~~  128 (255)
                      -.+|+|-||-+.+|.+++..|-++++.|.-+|..+.+-.           +.   .+.+|-.+    +.+.+.+++-+.+
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A-----------d~---sI~V~~~~swtEQe~~v~~~vg~sL   68 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA-----------DS---SILVDGNKSWTEQEQSVLEQVGSSL   68 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc-----------cc---eEEecCCcchhHHHHHHHHHHHHhh
Confidence            357899999999999999999999999998887655311           11   12233333    3345567777777


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++..+|.+++-||........-.+.-. .-+-++.-.++....-.+..-.++  +.+|-+-..+.-++..  +.|++..|
T Consensus        69 ~gekvDav~CVAGGWAGGnAksKdl~K-NaDLMwKQSvwtSaIsa~lAt~HL--K~GGLL~LtGAkaAl~--gTPgMIGY  143 (236)
T KOG4022|consen   69 QGEKVDAVFCVAGGWAGGNAKSKDLVK-NADLMWKQSVWTSAISAKLATTHL--KPGGLLQLTGAKAALG--GTPGMIGY  143 (236)
T ss_pred             cccccceEEEeeccccCCCcchhhhhh-chhhHHHHHHHHHHHHHHHHHhcc--CCCceeeecccccccC--CCCcccch
Confidence            777899999999987542211111111 123344455555555555555555  2346666677777776  78999999


Q ss_pred             hHHHHHHHHHHHHHHHHHc--cCCceEEEeeeeeeeeCCcchhh
Q 025260          209 AATKAYIDQFSRSLYVEYR--KSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~--~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      +++|+|+.+++++|+.+-.  +.|-.+..|.|-..+|||.+.+.
T Consensus       144 GMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwM  187 (236)
T KOG4022|consen  144 GMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWM  187 (236)
T ss_pred             hHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccC
Confidence            9999999999999998864  45778899999999999998865

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.40  E-value=1.1e-11  Score=116.99  Aligned_cols=167  Identities=17%  Similarity=0.128  Sum_probs=112.5

Q ss_pred             EEEEECCCCchHHHHHHHHH--HcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           55 WALVTGPTDGIGKSFAFQLA--KTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la--~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      +++||||+|.||.+++++|.  ++|++|++++|+... .. .+++.......++..+..|+++......+...+.+.  +
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~-~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l~--~   77 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SR-LEALAAYWGADRVVPLVGDLTEPGLGLSEADIAELG--D   77 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HH-HHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHhc--C
Confidence            69999999999999999999  589999999996532 11 122222212246788889998742111111122233  5


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCC-----------
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS-----------  201 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~-----------  201 (255)
                      +|++||+||....      ..+   .+...++|+.++..+++++..    .+..++|++||...+....           
T Consensus        78 ~D~Vih~Aa~~~~------~~~---~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~  144 (657)
T PRK07201         78 IDHVVHLAAIYDL------TAD---EEAQRAANVDGTRNVVELAER----LQAATFHHVSSIAVAGDYEGVFREDDFDEG  144 (657)
T ss_pred             CCEEEECceeecC------CCC---HHHHHHHHhHHHHHHHHHHHh----cCCCeEEEEeccccccCccCccccccchhh
Confidence            6799999997532      112   244668899999888887543    3456899999976543110           


Q ss_pred             CCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       202 ~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                      ......|+.||.+.+.+.+.      ..|+++..++|+.+-.+
T Consensus       145 ~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~  181 (657)
T PRK07201        145 QGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGD  181 (657)
T ss_pred             cCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeec
Confidence            11235699999999987752      24899999999999765

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.39  E-value=2e-11  Score=105.34  Aligned_cols=147  Identities=22%  Similarity=0.178  Sum_probs=102.5

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG  134 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id  134 (255)
                      +++||||+|.||++++++|.++|++|.+.+|+.++...    +.    ...+.++.+|+.|.     +.+.+.+.+  +|
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~----l~----~~~v~~v~~Dl~d~-----~~l~~al~g--~d   66 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF----LK----EWGAELVYGDLSLP-----ETLPPSFKG--VT   66 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh----Hh----hcCCEEEECCCCCH-----HHHHHHHCC--CC
Confidence            59999999999999999999999999999998754322    11    12467788898875     345555664  45


Q ss_pred             EEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHHHHH
Q 025260          135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAY  214 (255)
Q Consensus       135 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~asK~a  214 (255)
                      ++||+++....        +   .....++|..++.++++++..    .+-.++|++||..+..    .+..+|..+|..
T Consensus        67 ~Vi~~~~~~~~--------~---~~~~~~~~~~~~~~l~~aa~~----~gvkr~I~~Ss~~~~~----~~~~~~~~~K~~  127 (317)
T CHL00194         67 AIIDASTSRPS--------D---LYNAKQIDWDGKLALIEAAKA----AKIKRFIFFSILNAEQ----YPYIPLMKLKSD  127 (317)
T ss_pred             EEEECCCCCCC--------C---ccchhhhhHHHHHHHHHHHHH----cCCCEEEEeccccccc----cCCChHHHHHHH
Confidence            99998764211        1   123456788888888877543    4445899999854322    123468888887


Q ss_pred             HHHHHHHHHHHHccCCceEEEeeeeeee
Q 025260          215 IDQFSRSLYVEYRKSGIDVQCQVLFLLC  242 (255)
Q Consensus       215 l~~~~~~l~~e~~~~gi~v~~v~Pg~v~  242 (255)
                      .+.+.+       ..|++...++|+.+-
T Consensus       128 ~e~~l~-------~~~l~~tilRp~~~~  148 (317)
T CHL00194        128 IEQKLK-------KSGIPYTIFRLAGFF  148 (317)
T ss_pred             HHHHHH-------HcCCCeEEEeecHHh
Confidence            765442       358899999998543

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.39  E-value=2.5e-11  Score=96.12  Aligned_cols=144  Identities=21%  Similarity=0.289  Sum_probs=104.6

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCccE
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGV  135 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id~  135 (255)
                      |+|+||+|.+|+.++++|.++|++|.+..|++++.++          ...+.++.+|+.|.     +.+.+.+.+  .|+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~----------~~~~~~~~~d~~d~-----~~~~~al~~--~d~   63 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED----------SPGVEIIQGDLFDP-----DSVKAALKG--ADA   63 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH----------CTTEEEEESCTTCH-----HHHHHHHTT--SSE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc----------ccccccceeeehhh-----hhhhhhhhh--cch
Confidence            6899999999999999999999999999999997765          34688999999875     566777774  559


Q ss_pred             EEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC-------CCchhc
Q 025260          136 LINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD-------PLYSVY  208 (255)
Q Consensus       136 lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~-------~~~~~Y  208 (255)
                      +|+++|....          +             ...++.++..+.+.+-.++|++||......+..       +....|
T Consensus        64 vi~~~~~~~~----------~-------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~  120 (183)
T PF13460_consen   64 VIHAAGPPPK----------D-------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEY  120 (183)
T ss_dssp             EEECCHSTTT----------H-------------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHH
T ss_pred             hhhhhhhhcc----------c-------------ccccccccccccccccccceeeeccccCCCCCcccccccccchhhh
Confidence            9999975421          1             334455555566667779999998776652211       112245


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                      ...|...+.+.       ...+++...++|+++-.+..
T Consensus       121 ~~~~~~~e~~~-------~~~~~~~~ivrp~~~~~~~~  151 (183)
T PF13460_consen  121 ARDKREAEEAL-------RESGLNWTIVRPGWIYGNPS  151 (183)
T ss_dssp             HHHHHHHHHHH-------HHSTSEEEEEEESEEEBTTS
T ss_pred             HHHHHHHHHHH-------HhcCCCEEEEECcEeEeCCC
Confidence            55555443322       23489999999999988763

...

>PLN02996 fatty acyl-CoA reductase

Probab=99.34  E-value=4.2e-11  Score=109.04  Aligned_cols=175  Identities=16%  Similarity=0.122  Sum_probs=116.9

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcC---CcEEEEeCChhh--HHHH-HHHH---------HhhcC-------CceEEE
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTG---LNLVLVGRNPDK--LKDV-SDSI---------QAKYA-------KTQIKS  108 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G---~~V~l~~r~~~~--~~~~-~~~~---------~~~~~-------~~~~~~  108 (255)
                      ++||+|+||||+|.||+.++++|++.+   .+|++..|..+.  .++. ..++         ++..+       ..++..
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            569999999999999999999999865   368888887532  1111 1111         11111       146889


Q ss_pred             EEEECCCCc-----HHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC
Q 025260          109 VVVDFSGDL-----DEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR  183 (255)
Q Consensus       109 ~~~d~~~~~-----~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~  183 (255)
                      +..|++++.     .+..+.+.   .  ++|++||+|+....      +   +..+..+++|+.|+.++++.+...   .
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~---~--~vD~ViH~AA~v~~------~---~~~~~~~~~Nv~gt~~ll~~a~~~---~  151 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMW---K--EIDIVVNLAATTNF------D---ERYDVALGINTLGALNVLNFAKKC---V  151 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHH---h--CCCEEEECccccCC------c---CCHHHHHHHHHHHHHHHHHHHHhc---C
Confidence            999998531     12223333   3  46699999997532      1   124668899999999999886542   1


Q ss_pred             CCcEEEEECCccccccCC-------CC-----------------------------------------------------
Q 025260          184 KKGAIVNIGSGAAIVIPS-------DP-----------------------------------------------------  203 (255)
Q Consensus       184 ~~g~iv~vsS~~~~~~~~-------~~-----------------------------------------------------  203 (255)
                      +-.++|++||...+....       .+                                                     
T Consensus       152 ~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (491)
T PLN02996        152 KVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHG  231 (491)
T ss_pred             CCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCC
Confidence            234799999876543200       00                                                     


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      ....|+.||++.+.+++..    . .|+.+..++|+.|..+.-+
T Consensus       232 ~pn~Y~~TK~~aE~lv~~~----~-~~lpv~i~RP~~V~G~~~~  270 (491)
T PLN02996        232 WPNTYVFTKAMGEMLLGNF----K-ENLPLVIIRPTMITSTYKE  270 (491)
T ss_pred             CCCchHhhHHHHHHHHHHh----c-CCCCEEEECCCEeccCCcC
Confidence            1135999999999988653    2 3799999999999876543

>PRK05865 hypothetical protein; Provisional

Probab=99.29  E-value=1.1e-10  Score=111.29  Aligned_cols=133  Identities=20%  Similarity=0.292  Sum_probs=97.9

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG  134 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id  134 (255)
                      .++||||+|+||++++++|+++|++|++++|+....      .     ...+..+.+|+.|.     +.+.+.+.+  +|
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~-----~~~v~~v~gDL~D~-----~~l~~al~~--vD   63 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W-----PSSADFIAADIRDA-----TAVESAMTG--AD   63 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c-----ccCceEEEeeCCCH-----HHHHHHHhC--CC
Confidence            589999999999999999999999999999975321      0     12466788999875     334444443  56


Q ss_pred             EEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHHHHH
Q 025260          135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAY  214 (255)
Q Consensus       135 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~asK~a  214 (255)
                      ++||+|+...+               .+++|+.++.+++++    +.+.+.+++|++||..                |.+
T Consensus        64 ~VVHlAa~~~~---------------~~~vNv~GT~nLLeA----a~~~gvkr~V~iSS~~----------------K~a  108 (854)
T PRK05865         64 VVAHCAWVRGR---------------NDHINIDGTANVLKA----MAETGTGRIVFTSSGH----------------QPR  108 (854)
T ss_pred             EEEECCCcccc---------------hHHHHHHHHHHHHHH----HHHcCCCeEEEECCcH----------------HHH
Confidence            99999975311               357899998877766    4445557899999842                777


Q ss_pred             HHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          215 IDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       215 l~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      .+.+.+       ..|+.+..++|+.+-.|-..
T Consensus       109 aE~ll~-------~~gl~~vILRp~~VYGP~~~  134 (854)
T PRK05865        109 VEQMLA-------DCGLEWVAVRCALIFGRNVD  134 (854)
T ss_pred             HHHHHH-------HcCCCEEEEEeceEeCCChH
Confidence            665542       24899999999999877533

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.26  E-value=2.8e-11  Score=102.96  Aligned_cols=149  Identities=16%  Similarity=0.199  Sum_probs=97.3

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG  134 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id  134 (255)
                      ++|||||+|-||.++.++|.++|++|+.++|+                       ++|++|.  +   .+.+.+...++|
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------~~dl~d~--~---~~~~~~~~~~pd   53 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS-----------------------DLDLTDP--E---AVAKLLEAFKPD   53 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------CS-TTSH--H---HHHHHHHHH--S
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------hcCCCCH--H---HHHHHHHHhCCC
Confidence            68999999999999999999999999999876                       5566654  3   333333333577


Q ss_pred             EEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC---------CCCCc
Q 025260          135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDPLY  205 (255)
Q Consensus       135 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~---------~~~~~  205 (255)
                      ++||+||....      +.-++.-+..+++|+.++..+.+.+..     .+.++|++||..-+.+.         +..+.
T Consensus        54 ~Vin~aa~~~~------~~ce~~p~~a~~iN~~~~~~la~~~~~-----~~~~li~~STd~VFdG~~~~~y~E~d~~~P~  122 (286)
T PF04321_consen   54 VVINCAAYTNV------DACEKNPEEAYAINVDATKNLAEACKE-----RGARLIHISTDYVFDGDKGGPYTEDDPPNPL  122 (286)
T ss_dssp             EEEE------H------HHHHHSHHHHHHHHTHHHHHHHHHHHH-----CT-EEEEEEEGGGS-SSTSSSB-TTS----S
T ss_pred             eEeccceeecH------HhhhhChhhhHHHhhHHHHHHHHHHHH-----cCCcEEEeeccEEEcCCcccccccCCCCCCC
Confidence            99999998643      112233467899999999999998754     34689999997544321         11125


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ..|+.+|...+...+.   ..    -+...++++++-.+-.+++
T Consensus       123 ~~YG~~K~~~E~~v~~---~~----~~~~IlR~~~~~g~~~~~~  159 (286)
T PF04321_consen  123 NVYGRSKLEGEQAVRA---AC----PNALILRTSWVYGPSGRNF  159 (286)
T ss_dssp             SHHHHHHHHHHHHHHH---H-----SSEEEEEE-SEESSSSSSH
T ss_pred             CHHHHHHHHHHHHHHH---hc----CCEEEEecceecccCCCch
Confidence            7899999998876665   11    2678888888877733333

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN02778 3,5-epimerase/4-reductase

Probab=99.24  E-value=1.3e-10  Score=99.35  Aligned_cols=133  Identities=16%  Similarity=0.162  Sum_probs=86.0

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      .+.+|||||+|.||.+++++|.++|++|+...++                          +.+.     +.+...+...+
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~--------------------------~~~~-----~~v~~~l~~~~   57 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGR--------------------------LENR-----ASLEADIDAVK   57 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCc--------------------------cCCH-----HHHHHHHHhcC
Confidence            4789999999999999999999999998753221                          1111     12223333345


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcc--ccc-----------c
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGA--AIV-----------I  199 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~--~~~-----------~  199 (255)
                      +|++||+||.....   ..+...++....+++|+.++.++++++...    +- +.+++||..  +..           .
T Consensus        58 ~D~ViH~Aa~~~~~---~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~----gv-~~v~~sS~~vy~~~~~~p~~~~~~~~  129 (298)
T PLN02778         58 PTHVFNAAGVTGRP---NVDWCESHKVETIRANVVGTLTLADVCRER----GL-VLTNYATGCIFEYDDAHPLGSGIGFK  129 (298)
T ss_pred             CCEEEECCcccCCC---CchhhhhCHHHHHHHHHHHHHHHHHHHHHh----CC-CEEEEecceEeCCCCCCCcccCCCCC
Confidence            78999999986421   111122334678899999999999997542    22 344454432  111           0


Q ss_pred             ---CCCCCchhchHHHHHHHHHHHHHHH
Q 025260          200 ---PSDPLYSVYAATKAYIDQFSRSLYV  224 (255)
Q Consensus       200 ---~~~~~~~~Y~asK~al~~~~~~l~~  224 (255)
                         ++.+....|+.||.+.+.+++..+.
T Consensus       130 Ee~~p~~~~s~Yg~sK~~~E~~~~~y~~  157 (298)
T PLN02778        130 EEDTPNFTGSFYSKTKAMVEELLKNYEN  157 (298)
T ss_pred             cCCCCCCCCCchHHHHHHHHHHHHHhhc
Confidence               1122236899999999999887653

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.23  E-value=4e-10  Score=96.52  Aligned_cols=175  Identities=17%  Similarity=0.156  Sum_probs=116.6

Q ss_pred             cEEEEECCCCchHHHHHHHHHHc-CCcEEEEeCChhh---HHHHHHHHH-----hhcCCceEEEEEEECCCCcHHHHHHH
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDK---LKDVSDSIQ-----AKYAKTQIKSVVVDFSGDLDEGVERI  124 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~-G~~V~l~~r~~~~---~~~~~~~~~-----~~~~~~~~~~~~~d~~~~~~~~~~~~  124 (255)
                      +++++|||+|.+|.-+..+|..+ .++|++..|-.+.   .+...+.+.     +.....++..+..|++...=..-+.-
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            57999999999999999998865 4699999987552   222222222     11235689999999986321111222


Q ss_pred             HHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC----
Q 025260          125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP----  200 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~----  200 (255)
                      .+.+.+ .+|.++||++...- .     .+   ..+....|+.|+..++|.+.-    .+...+.++||++.....    
T Consensus        81 ~~~La~-~vD~I~H~gA~Vn~-v-----~p---Ys~L~~~NVlGT~evlrLa~~----gk~Kp~~yVSsisv~~~~~~~~  146 (382)
T COG3320          81 WQELAE-NVDLIIHNAALVNH-V-----FP---YSELRGANVLGTAEVLRLAAT----GKPKPLHYVSSISVGETEYYSN  146 (382)
T ss_pred             HHHHhh-hcceEEecchhhcc-c-----Cc---HHHhcCcchHhHHHHHHHHhc----CCCceeEEEeeeeeccccccCC
Confidence            222322 46699999997642 1     11   355667899999888887643    222348999987754420    


Q ss_pred             --------------CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          201 --------------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       201 --------------~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                                    .....+.|+.||++.+.+++...    ..|.++..++||.|-.+-.
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~----~rGLpv~I~Rpg~I~gds~  202 (382)
T COG3320         147 FTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAG----DRGLPVTIFRPGYITGDSR  202 (382)
T ss_pred             CccccccccccccccCccCCCcchhHHHHHHHHHHHh----hcCCCeEEEecCeeeccCc
Confidence                          11223689999999888776554    3489999999999986543

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.21  E-value=2.6e-10  Score=98.35  Aligned_cols=176  Identities=16%  Similarity=0.149  Sum_probs=120.9

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcC--CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G--~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      ++.+++||||+|.+|++++.+|.+++  .+|.+.|..+....--.++...  .+..+....+|+.+.     ..+...+.
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~--~~~~v~~~~~D~~~~-----~~i~~a~~   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF--RSGRVTVILGDLLDA-----NSISNAFQ   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc--cCCceeEEecchhhh-----hhhhhhcc
Confidence            47899999999999999999999999  6899999876521111111111  155688888998875     55666665


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc----------
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI----------  199 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~----------  199 (255)
                      +  . .+||+|....+      +.-..+-+..+++|+.|+-+++.++..    .+-.++|++||..-.+.          
T Consensus        76 ~--~-~Vvh~aa~~~~------~~~~~~~~~~~~vNV~gT~nvi~~c~~----~~v~~lIYtSs~~Vvf~g~~~~n~~E~  142 (361)
T KOG1430|consen   76 G--A-VVVHCAASPVP------DFVENDRDLAMRVNVNGTLNVIEACKE----LGVKRLIYTSSAYVVFGGEPIINGDES  142 (361)
T ss_pred             C--c-eEEEeccccCc------cccccchhhheeecchhHHHHHHHHHH----hCCCEEEEecCceEEeCCeecccCCCC
Confidence            4  3 45666554322      111223467899999999888888654    45567999999775552          


Q ss_pred             CCCC--CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          200 PSDP--LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       200 ~~~~--~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      .+.|  ...+|+.||+--+.+.+....   ..+....+++|..|-.|--.+..
T Consensus       143 ~p~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~~~  192 (361)
T KOG1430|consen  143 LPYPLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKRLL  192 (361)
T ss_pred             CCCccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCcccc
Confidence            1222  235899999988887776654   34688999999888776555443

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.16  E-value=1e-09  Score=93.09  Aligned_cols=157  Identities=15%  Similarity=0.132  Sum_probs=92.4

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCccE
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGV  135 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id~  135 (255)
                      ++||||+|.||.+++++|+++|++|++++|+........        .  ...  .|...      ....+.+.  ++|+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~--~~~--~~~~~------~~~~~~~~--~~D~   60 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK--------W--EGY--KPWAP------LAESEALE--GADA   60 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc--------c--eee--ecccc------cchhhhcC--CCCE
Confidence            689999999999999999999999999999876543211        0  011  11111      12223334  4669


Q ss_pred             EEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCC--cEEEEECCccccccCC-------C-C-C
Q 025260          136 LINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK--GAIVNIGSGAAIVIPS-------D-P-L  204 (255)
Q Consensus       136 lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~--g~iv~vsS~~~~~~~~-------~-~-~  204 (255)
                      +||+||.....    .+.+.+..+..+++|+.++..+++++..    .+.  .++++.|+...+....       . + .
T Consensus        61 Vvh~a~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~  132 (292)
T TIGR01777        61 VINLAGEPIAD----KRWTEERKQEIRDSRIDTTRALVEAIAA----AEQKPKVFISASAVGYYGTSEDRVFTEEDSPAG  132 (292)
T ss_pred             EEECCCCCccc----ccCCHHHHHHHHhcccHHHHHHHHHHHh----cCCCceEEEEeeeEEEeCCCCCCCcCcccCCCC
Confidence            99999974321    1234444567788999999888887643    332  2344444432222100       0 0 1


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                      ...|+..+...+...+    ++...++.+..++|+.+-.|
T Consensus       133 ~~~~~~~~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~  168 (292)
T TIGR01777       133 DDFLAELCRDWEEAAQ----AAEDLGTRVVLLRTGIVLGP  168 (292)
T ss_pred             CChHHHHHHHHHHHhh----hchhcCCceEEEeeeeEECC
Confidence            1122222333322222    23345799999999999876

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.14  E-value=3.5e-09  Score=97.97  Aligned_cols=131  Identities=17%  Similarity=0.184  Sum_probs=89.0

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCC---cEEEEeCChhh--HHHHH-HH---------HHhhcC-------CceEEE
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGL---NLVLVGRNPDK--LKDVS-DS---------IQAKYA-------KTQIKS  108 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~---~V~l~~r~~~~--~~~~~-~~---------~~~~~~-------~~~~~~  108 (255)
                      ++||+|+||||+|.||+.++++|++.+.   +|++..|..+.  ..+.. ++         +++..+       ..++..
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            4589999999999999999999998763   68998886432  22221 12         222222       246889


Q ss_pred             EEEECCCCc----HHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC
Q 025260          109 VVVDFSGDL----DEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK  184 (255)
Q Consensus       109 ~~~d~~~~~----~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~  184 (255)
                      +..|+++..    ++..+.+.+     ++|++||+|+....      +   +..+..+++|+.|+.++++.+...   .+
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~-----~vDiVIH~AA~v~f------~---~~~~~a~~vNV~GT~nLLelA~~~---~~  259 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAK-----EVDVIINSAANTTF------D---ERYDVAIDINTRGPCHLMSFAKKC---KK  259 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHh-----cCCEEEECcccccc------c---cCHHHHHHHHHHHHHHHHHHHHHc---CC
Confidence            999999751    233333332     46799999997531      1   235678899999999999886542   12


Q ss_pred             CcEEEEECCccccc
Q 025260          185 KGAIVNIGSGAAIV  198 (255)
Q Consensus       185 ~g~iv~vsS~~~~~  198 (255)
                      ..++|++||...+.
T Consensus       260 lk~fV~vSTayVyG  273 (605)
T PLN02503        260 LKLFLQVSTAYVNG  273 (605)
T ss_pred             CCeEEEccCceeec
Confidence            34689998865443

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.11  E-value=2.2e-09  Score=89.65  Aligned_cols=148  Identities=16%  Similarity=0.143  Sum_probs=106.5

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCccE
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGV  135 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id~  135 (255)
                      +||||++|-+|.++++.|. .+++|+.++|.+                       +|++|.     +.+.+.+.+.++|+
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------------~Ditd~-----~~v~~~i~~~~PDv   53 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------------LDITDP-----DAVLEVIRETRPDV   53 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------------ccccCh-----HHHHHHHHhhCCCE
Confidence            8999999999999999999 678999888753                       788876     45555566667889


Q ss_pred             EEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC---------CCCCch
Q 025260          136 LINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDPLYS  206 (255)
Q Consensus       136 lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~---------~~~~~~  206 (255)
                      +||+|++....      .-+.+-+..+.+|..|+.++.+++-.     -+.++|++|+-.-+.+.         ...+..
T Consensus        54 VIn~AAyt~vD------~aE~~~e~A~~vNa~~~~~lA~aa~~-----~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~n  122 (281)
T COG1091          54 VINAAAYTAVD------KAESEPELAFAVNATGAENLARAAAE-----VGARLVHISTDYVFDGEKGGPYKETDTPNPLN  122 (281)
T ss_pred             EEECccccccc------cccCCHHHHHHhHHHHHHHHHHHHHH-----hCCeEEEeecceEecCCCCCCCCCCCCCCChh
Confidence            99999986432      12222477899999999999999754     34679999975543321         112357


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      .|+.||.+-+..++...       -+...++..|+-..-..+|.
T Consensus       123 vYG~sKl~GE~~v~~~~-------~~~~I~Rtswv~g~~g~nFv  159 (281)
T COG1091         123 VYGRSKLAGEEAVRAAG-------PRHLILRTSWVYGEYGNNFV  159 (281)
T ss_pred             hhhHHHHHHHHHHHHhC-------CCEEEEEeeeeecCCCCCHH
Confidence            89999999988776654       24455666666655444443

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.04  E-value=1.5e-08  Score=103.26  Aligned_cols=170  Identities=18%  Similarity=0.121  Sum_probs=114.0

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcC----CcEEEEeCChhhHHHHHHHHHhh---c------CCceEEEEEEECCCCc--
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTG----LNLVLVGRNPDKLKDVSDSIQAK---Y------AKTQIKSVVVDFSGDL--  117 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G----~~V~l~~r~~~~~~~~~~~~~~~---~------~~~~~~~~~~d~~~~~--  117 (255)
                      .++|+||||+|.||..++++|+++|    .+|++..|+...... .+.+.+.   +      ...++.++..|+++..  
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~-~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAG-LERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHH-HHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            5889999999999999999999987    789999997543222 1222110   0      0135788889987631  


Q ss_pred             --HHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcc
Q 025260          118 --DEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGA  195 (255)
Q Consensus       118 --~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~  195 (255)
                        .+..+.+   ..  ++|++||||+....      ..+.   ......|+.|+.++++.+..    .+..+++++||.+
T Consensus      1050 l~~~~~~~l---~~--~~d~iiH~Aa~~~~------~~~~---~~~~~~nv~gt~~ll~~a~~----~~~~~~v~vSS~~ 1111 (1389)
T TIGR03443      1050 LSDEKWSDL---TN--EVDVIIHNGALVHW------VYPY---SKLRDANVIGTINVLNLCAE----GKAKQFSFVSSTS 1111 (1389)
T ss_pred             cCHHHHHHH---Hh--cCCEEEECCcEecC------ccCH---HHHHHhHHHHHHHHHHHHHh----CCCceEEEEeCee
Confidence              2222222   23  46699999997531      1122   33446799999999888643    3345899999975


Q ss_pred             ccccC---------------C-----------CCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          196 AIVIP---------------S-----------DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       196 ~~~~~---------------~-----------~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                      .+...               +           ......|+.||.+.+.+.+..+.    .|+.+..++||.|..+.
T Consensus      1112 v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~~ 1183 (1389)
T TIGR03443      1112 ALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVTGDS 1183 (1389)
T ss_pred             ecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccccCC
Confidence            54210               0           00124599999999988876543    48999999999997653

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.04  E-value=5.5e-10  Score=91.67  Aligned_cols=100  Identities=16%  Similarity=0.126  Sum_probs=69.6

Q ss_pred             cEEEEECC-CCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHhcC
Q 025260           54 SWALVTGP-TDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAIEG  130 (255)
Q Consensus        54 k~vlITGa-s~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~  130 (255)
                      .+=.||.. |||||+++|++|+++|++|+++++... +       ..   ..   ...+|+.+  +.++.++.+.+.+++
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l-------~~---~~---~~~~Dv~d~~s~~~l~~~v~~~~g~   80 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-L-------KP---EP---HPNLSIREIETTKDLLITLKELVQE   80 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-c-------cc---cc---CCcceeecHHHHHHHHHHHHHHcCC
Confidence            55567776 578999999999999999999886311 1       00   00   13466665  345666667776664


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHH
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ  174 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  174 (255)
                        +|++|||||+...  .++.+.+.++|++++.   .+.+.+.+
T Consensus        81 --iDiLVnnAgv~d~--~~~~~~s~e~~~~~~~---~~~~~~~~  117 (227)
T TIGR02114        81 --HDILIHSMAVSDY--TPVYMTDLEQVQASDN---LNEFLSKQ  117 (227)
T ss_pred             --CCEEEECCEeccc--cchhhCCHHHHhhhcc---hhhhhccc
Confidence              5699999998643  5678899999997754   45555554

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.01  E-value=7.6e-09  Score=98.01  Aligned_cols=143  Identities=17%  Similarity=0.148  Sum_probs=92.1

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      .+.+|||||+|-||++++++|.++|++|....                          .|++|.     +.+.+.+...+
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~~--------------------------~~l~d~-----~~v~~~i~~~~  428 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYGK--------------------------GRLEDR-----SSLLADIRNVK  428 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEeec--------------------------cccccH-----HHHHHHHHhhC
Confidence            46799999999999999999999998873110                          123432     22333344446


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccc-------------c
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-------------I  199 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~-------------~  199 (255)
                      +|++||+|+.....   ..+...++-+..+++|+.++.++++++..    .+ .+++++||...+.             .
T Consensus       429 pd~Vih~Aa~~~~~---~~~~~~~~~~~~~~~N~~gt~~l~~a~~~----~g-~~~v~~Ss~~v~~~~~~~~~~~~~p~~  500 (668)
T PLN02260        429 PTHVFNAAGVTGRP---NVDWCESHKVETIRANVVGTLTLADVCRE----NG-LLMMNFATGCIFEYDAKHPEGSGIGFK  500 (668)
T ss_pred             CCEEEECCcccCCC---CCChHHhCHHHHHHHHhHHHHHHHHHHHH----cC-CeEEEEcccceecCCcccccccCCCCC
Confidence            78999999976321   11222334577889999999999999754    22 3456665533211             0


Q ss_pred             ---CCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEee
Q 025260          200 ---PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQV  237 (255)
Q Consensus       200 ---~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~  237 (255)
                         ++.+....|+.||.+.+.+++....   ...+++..+.
T Consensus       501 E~~~~~~~~~~Yg~sK~~~E~~~~~~~~---~~~~r~~~~~  538 (668)
T PLN02260        501 EEDKPNFTGSFYSKTKAMVEELLREYDN---VCTLRVRMPI  538 (668)
T ss_pred             cCCCCCCCCChhhHHHHHHHHHHHhhhh---heEEEEEEec
Confidence               1122346899999999998877642   1245555544

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=98.96  E-value=5e-09  Score=86.22  Aligned_cols=171  Identities=17%  Similarity=0.086  Sum_probs=117.6

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHc--CCcEEEEeCCh-hhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKT--GLNLVLVGRNP-DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~--G~~V~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      .+.++||||.|.||...+..++..  .++.+..+.-. -...+..++.+.   .....++..|+.++     ..+.-.+.
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n---~p~ykfv~~di~~~-----~~~~~~~~   77 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRN---SPNYKFVEGDIADA-----DLVLYLFE   77 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhcc---CCCceEeeccccch-----HHHHhhhc
Confidence            388999999999999999999875  46666554321 111222233322   56788899998876     34444444


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc----------
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI----------  199 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~----------  199 (255)
                      ..++|.++|-|+......      +.-+--.....|++++..+++...-..   +-.++|.+|+..-+..          
T Consensus        78 ~~~id~vihfaa~t~vd~------s~~~~~~~~~nnil~t~~Lle~~~~sg---~i~~fvhvSTdeVYGds~~~~~~~E~  148 (331)
T KOG0747|consen   78 TEEIDTVIHFAAQTHVDR------SFGDSFEFTKNNILSTHVLLEAVRVSG---NIRRFVHVSTDEVYGDSDEDAVVGEA  148 (331)
T ss_pred             cCchhhhhhhHhhhhhhh------hcCchHHHhcCCchhhhhHHHHHHhcc---CeeEEEEecccceecCcccccccccc
Confidence            447889999998764311      111123456789999999998876643   2347999998765542          


Q ss_pred             -CCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          200 -PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       200 -~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                       .+. +..+|++||+|.+++.+++.+.|   |+.+..++-+.|-.|
T Consensus       149 s~~n-PtnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP  190 (331)
T KOG0747|consen  149 SLLN-PTNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGP  190 (331)
T ss_pred             ccCC-CCCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCC
Confidence             122 35789999999999999999887   788877776666554

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.91  E-value=3.9e-09  Score=86.93  Aligned_cols=174  Identities=17%  Similarity=0.126  Sum_probs=123.0

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhh--cCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAK--YAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      +|++||||-+|-=|.=+|+.|.++|+.|.-+.|.........-.+.+.  ..+.++....+|++|.     ..+.+.+..
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~-----~~l~r~l~~   76 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDS-----SNLLRILEE   76 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccch-----HHHHHHHHh
Confidence            699999999999999999999999999999887744332221122211  1245688999999986     344444455


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc---------CC
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI---------PS  201 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~---------~~  201 (255)
                      ..+|-+.|-|+.+..      ..|.+..+.+.+++-+|+.+++.+..-.-  .++.|+..-||..-+..         .|
T Consensus        77 v~PdEIYNLaAQS~V------~vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~~rfYQAStSE~fG~v~~~pq~E~TP  148 (345)
T COG1089          77 VQPDEIYNLAAQSHV------GVSFEQPEYTADVDAIGTLRLLEAIRILG--EKKTRFYQASTSELYGLVQEIPQKETTP  148 (345)
T ss_pred             cCchhheeccccccc------cccccCcceeeeechhHHHHHHHHHHHhC--CcccEEEecccHHhhcCcccCccccCCC
Confidence            567788888887643      44566668889999999999999865422  33567777766543331         24


Q ss_pred             CCCchhchHHHHHHHHHHHHHHHHHc---cCCceEEEeeee
Q 025260          202 DPLYSVYAATKAYIDQFSRSLYVEYR---KSGIDVQCQVLF  239 (255)
Q Consensus       202 ~~~~~~Y~asK~al~~~~~~l~~e~~---~~gi~v~~v~Pg  239 (255)
                      ..+.++|+++|..-...+...+.-|.   -.||-+|.=+|.
T Consensus       149 FyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~  189 (345)
T COG1089         149 FYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPL  189 (345)
T ss_pred             CCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCC
Confidence            45578999999998888888887663   346677766664

>PLN00016 RNA-binding protein; Provisional

Probab=98.89  E-value=4.5e-08  Score=86.54  Aligned_cols=147  Identities=16%  Similarity=0.155  Sum_probs=92.8

Q ss_pred             CcEEEEE----CCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHH-------HHHHhhcCCceEEEEEEECCCCcHHHH
Q 025260           53 GSWALVT----GPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS-------DSIQAKYAKTQIKSVVVDFSGDLDEGV  121 (255)
Q Consensus        53 gk~vlIT----Gas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~-------~~~~~~~~~~~~~~~~~d~~~~~~~~~  121 (255)
                      .+.|+||    ||+|.||.+++++|.++|++|++++|+........       .++.    ...+..+.+|+.|      
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~----~~~v~~v~~D~~d------  121 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS----SAGVKTVWGDPAD------  121 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh----hcCceEEEecHHH------
Confidence            5789999    99999999999999999999999999876432211       1111    1235667777654      


Q ss_pred             HHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCC
Q 025260          122 ERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS  201 (255)
Q Consensus       122 ~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~  201 (255)
                        +.+.+...++|++|+++|..           .+           ++    +.++...++.+-.++|++||...+....
T Consensus       122 --~~~~~~~~~~d~Vi~~~~~~-----------~~-----------~~----~~ll~aa~~~gvkr~V~~SS~~vyg~~~  173 (378)
T PLN00016        122 --VKSKVAGAGFDVVYDNNGKD-----------LD-----------EV----EPVADWAKSPGLKQFLFCSSAGVYKKSD  173 (378)
T ss_pred             --HHhhhccCCccEEEeCCCCC-----------HH-----------HH----HHHHHHHHHcCCCEEEEEccHhhcCCCC
Confidence              22222223577999987521           11           12    2233334444556899999976544211


Q ss_pred             C-CC-----chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          202 D-PL-----YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       202 ~-~~-----~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                      . |.     ..++. +|...+.+.+       ..++.+..++|+.+-.|.
T Consensus       174 ~~p~~E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~  215 (378)
T PLN00016        174 EPPHVEGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPG  215 (378)
T ss_pred             CCCCCCCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCC
Confidence            1 10     11222 7877776542       248999999999998764

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.87  E-value=2.5e-08  Score=82.22  Aligned_cols=167  Identities=15%  Similarity=0.127  Sum_probs=116.3

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      ..+++++||||+|.||.+++.+|..+|..|+++|--.++..+..+.+..   ...+..+.-|+..       .+..    
T Consensus        25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~---~~~fel~~hdv~~-------pl~~----   90 (350)
T KOG1429|consen   25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG---HPNFELIRHDVVE-------PLLK----   90 (350)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc---CcceeEEEeechh-------HHHH----
Confidence            4578999999999999999999999999999999766655544433322   3344445555443       3333    


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC----------
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP----------  200 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~----------  200 (255)
                       .+|.++|-|....+..  . ...   --+++..|+.++.+++..+..     -+.|++..|+..-+..|          
T Consensus        91 -evD~IyhLAapasp~~--y-~~n---pvktIktN~igtln~lglakr-----v~aR~l~aSTseVYgdp~~hpq~e~yw  158 (350)
T KOG1429|consen   91 -EVDQIYHLAAPASPPH--Y-KYN---PVKTIKTNVIGTLNMLGLAKR-----VGARFLLASTSEVYGDPLVHPQVETYW  158 (350)
T ss_pred             -HhhhhhhhccCCCCcc--c-ccC---ccceeeecchhhHHHHHHHHH-----hCceEEEeecccccCCcccCCCccccc
Confidence             2446777777765411  1 111   246788999999998887644     34678888886655531          


Q ss_pred             ----CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          201 ----SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       201 ----~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                          +.....+|.-.|.+.+.++....++.   ||.|...++.-+-.|..
T Consensus       159 g~vnpigpr~cydegKr~aE~L~~~y~k~~---giE~rIaRifNtyGPrm  205 (350)
T KOG1429|consen  159 GNVNPIGPRSCYDEGKRVAETLCYAYHKQE---GIEVRIARIFNTYGPRM  205 (350)
T ss_pred             cccCcCCchhhhhHHHHHHHHHHHHhhccc---CcEEEEEeeecccCCcc
Confidence                22236789999999999888877664   89999888887776654

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=98.86  E-value=3.7e-08  Score=83.55  Aligned_cols=135  Identities=11%  Similarity=0.082  Sum_probs=83.3

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh---cC-C
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI---EG-L  131 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~---~~-~  131 (255)
                      ++||||+|.+|++++++|.++|++|.+.+|++++..           ...+..+.+|..|.     +.+.+.+   .. .
T Consensus         2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~d~~d~-----~~l~~a~~~~~~~~   65 (285)
T TIGR03649         2 ILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-----------GPNEKHVKFDWLDE-----DTWDNPFSSDDGME   65 (285)
T ss_pred             EEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-----------CCCCccccccCCCH-----HHHHHHHhcccCcC
Confidence            799999999999999999999999999999987532           11234456777764     2333333   11 1


Q ss_pred             C-ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchH
Q 025260          132 D-VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA  210 (255)
Q Consensus       132 ~-id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~a  210 (255)
                      . +|.++++++...         +.  .+            ..+.++..+++.+-.+||++||.....  +.+       
T Consensus        66 g~~d~v~~~~~~~~---------~~--~~------------~~~~~i~aa~~~gv~~~V~~Ss~~~~~--~~~-------  113 (285)
T TIGR03649        66 PEISAVYLVAPPIP---------DL--AP------------PMIKFIDFARSKGVRRFVLLSASIIEK--GGP-------  113 (285)
T ss_pred             CceeEEEEeCCCCC---------Ch--hH------------HHHHHHHHHHHcCCCEEEEeeccccCC--CCc-------
Confidence            3 668988876321         00  01            112334445556667899999854432  111       


Q ss_pred             HHHHHHHHHHHHHHHHcc-CCceEEEeeeeeeeeCC
Q 025260          211 TKAYIDQFSRSLYVEYRK-SGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       211 sK~al~~~~~~l~~e~~~-~gi~v~~v~Pg~v~T~~  245 (255)
                      .+...+.+       +.. .|+....++|+++..++
T Consensus       114 ~~~~~~~~-------l~~~~gi~~tilRp~~f~~~~  142 (285)
T TIGR03649       114 AMGQVHAH-------LDSLGGVEYTVLRPTWFMENF  142 (285)
T ss_pred             hHHHHHHH-------HHhccCCCEEEEeccHHhhhh
Confidence            22222221       222 38999999999776554

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.80  E-value=5e-08  Score=88.23  Aligned_cols=130  Identities=22%  Similarity=0.189  Sum_probs=90.0

Q ss_pred             CCcEEE----EECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           52 YGSWAL----VTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        52 ~gk~vl----ITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      .|..++    |+||++|+|.++++.+...|++|+.+.+...+..                                   .
T Consensus        33 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~-----------------------------------~   77 (450)
T PRK08261         33 PGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWA-----------------------------------A   77 (450)
T ss_pred             CCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccc-----------------------------------c
Confidence            356666    8999999999999999999999998766543110                                   0


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ....+++.++..+-..         .+.+++        .+.+..++..++.|.  +.|+||+++|..+..  .   ...
T Consensus        78 ~~~~~~~~~~~d~~~~---------~~~~~l--------~~~~~~~~~~l~~l~--~~griv~i~s~~~~~--~---~~~  133 (450)
T PRK08261         78 GWGDRFGALVFDATGI---------TDPADL--------KALYEFFHPVLRSLA--PCGRVVVLGRPPEAA--A---DPA  133 (450)
T ss_pred             CcCCcccEEEEECCCC---------CCHHHH--------HHHHHHHHHHHHhcc--CCCEEEEEccccccC--C---chH
Confidence            0011233344322111         012222        233466777777774  458999999976643  2   346


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeee
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLL  241 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v  241 (255)
                      |+++|+|+.++++++++|+ +.|++++.+.|+..
T Consensus       134 ~~~akaal~gl~rsla~E~-~~gi~v~~i~~~~~  166 (450)
T PRK08261        134 AAAAQRALEGFTRSLGKEL-RRGATAQLVYVAPG  166 (450)
T ss_pred             HHHHHHHHHHHHHHHHHHh-hcCCEEEEEecCCC
Confidence            9999999999999999999 77999999999873

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.79  E-value=5.9e-08  Score=76.56  Aligned_cols=83  Identities=22%  Similarity=0.329  Sum_probs=62.2

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcCC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGL  131 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~  131 (255)
                      ++++||||+ |+|.+++++|+++|++|++.+|+.++.++....+..   ...+..+.+|+.|.  +.++++.+.+..+  
T Consensus         1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~---~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g--   74 (177)
T PRK08309          1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT---PESITPLPLDYHDDDALKLAIKSTIEKNG--   74 (177)
T ss_pred             CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc---CCcEEEEEccCCCHHHHHHHHHHHHHHcC--
Confidence            368999998 788889999999999999999998776666554432   34677888999874  4556666655555  


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      .+|++|+.+-.
T Consensus        75 ~id~lv~~vh~   85 (177)
T PRK08309         75 PFDLAVAWIHS   85 (177)
T ss_pred             CCeEEEEeccc
Confidence            45688877654

>PRK12320 hypothetical protein; Provisional

Probab=98.75  E-value=2.8e-07  Score=86.57  Aligned_cols=135  Identities=16%  Similarity=0.175  Sum_probs=91.2

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG  134 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id  134 (255)
                      +++||||+|.||.+++++|.++|++|++++|+....         .  ...+.++.+|+.+.  .    +.+.+.+  +|
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~--~~~ve~v~~Dl~d~--~----l~~al~~--~D   62 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------L--DPRVDYVCASLRNP--V----LQELAGE--AD   62 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------c--cCCceEEEccCCCH--H----HHHHhcC--CC
Confidence            589999999999999999999999999999875421         0  23466788898864  1    3334443  56


Q ss_pred             EEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHHHHH
Q 025260          135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAY  214 (255)
Q Consensus       135 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~asK~a  214 (255)
                      ++||.|+....        .      ..++|+.+..++++++.    +.+ .++|++||..+.     +.  .|.     
T Consensus        63 ~VIHLAa~~~~--------~------~~~vNv~Gt~nLleAA~----~~G-vRiV~~SS~~G~-----~~--~~~-----  111 (699)
T PRK12320         63 AVIHLAPVDTS--------A------PGGVGITGLAHVANAAA----RAG-ARLLFVSQAAGR-----PE--LYR-----  111 (699)
T ss_pred             EEEEcCccCcc--------c------hhhHHHHHHHHHHHHHH----HcC-CeEEEEECCCCC-----Cc--ccc-----
Confidence            99999986311        0      11478999988888763    333 479999986431     11  122     


Q ss_pred             HHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          215 IDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       215 l~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                         ..+.+..+   .++.+..+.|+.+-.|.
T Consensus       112 ---~aE~ll~~---~~~p~~ILR~~nVYGp~  136 (699)
T PRK12320        112 ---QAETLVST---GWAPSLVIRIAPPVGRQ  136 (699)
T ss_pred             ---HHHHHHHh---cCCCEEEEeCceecCCC
Confidence               12222222   35788889998887764

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.72  E-value=8.1e-07  Score=80.36  Aligned_cols=190  Identities=13%  Similarity=0.073  Sum_probs=126.2

Q ss_pred             cccccCCcEEEEECCC-CchHHHHHHHHHHcCCcEEEEeCCh-hhHHHHHHHHHhhc--CCceEEEEEEECCC--CcHHH
Q 025260           47 KNLRKYGSWALVTGPT-DGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAKY--AKTQIKSVVVDFSG--DLDEG  120 (255)
Q Consensus        47 ~~~~~~gk~vlITGas-~gIG~~la~~la~~G~~V~l~~r~~-~~~~~~~~~~~~~~--~~~~~~~~~~d~~~--~~~~~  120 (255)
                      ......+|+++||||+ +.||.+++..|++.|++|+++..+. ++..+..+.+...+  .+....++..+..+  +++..
T Consensus       390 ~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAl  469 (866)
T COG4982         390 NGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDAL  469 (866)
T ss_pred             CCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHH
Confidence            4556779999999999 7899999999999999999976554 34445555555433  35678888888876  45555


Q ss_pred             HHHHHHHhc------------CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC---C
Q 025260          121 VERIKEAIE------------GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK---K  185 (255)
Q Consensus       121 ~~~~~~~~~------------~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~---~  185 (255)
                      ++.+-.+-.            ...+|.++--|.+...  +.+.+..... +..|++-++...+++-.+.++--+++   +
T Consensus       470 IewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~--G~l~~agsra-E~~~rilLw~V~Rliggl~~~~s~r~v~~R  546 (866)
T COG4982         470 IEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVS--GELADAGSRA-EFAMRILLWNVLRLIGGLKKQGSSRGVDTR  546 (866)
T ss_pred             HHHhccccccccCCcceecccccCcceeeecccCCcc--CccccCCchH-HHHHHHHHHHHHHHHHHhhhhccccCcccc
Confidence            565543322            1257888888887654  3455555443 44566666666666655544322221   2


Q ss_pred             cEEEEECCccccccCCCCCchhchHHHHHHHHHHHHHHHHHc-cCCceEEEeeeeeee
Q 025260          186 GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR-KSGIDVQCQVLFLLC  242 (255)
Q Consensus       186 g~iv~vsS~~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~-~~gi~v~~v~Pg~v~  242 (255)
                      -++|.-.|...-.   +.+-+.|+-||++++..+--+..|-. ...+.+..-..||++
T Consensus       547 ~hVVLPgSPNrG~---FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtr  601 (866)
T COG4982         547 LHVVLPGSPNRGM---FGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTR  601 (866)
T ss_pred             eEEEecCCCCCCc---cCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeec
Confidence            4667666644222   35568999999999999888887742 123566666777777

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.70  E-value=5.7e-08  Score=85.94  Aligned_cols=78  Identities=19%  Similarity=0.292  Sum_probs=57.4

Q ss_pred             cCCcEEEEECC---------------CCc-hHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECC
Q 025260           51 KYGSWALVTGP---------------TDG-IGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS  114 (255)
Q Consensus        51 ~~gk~vlITGa---------------s~g-IG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  114 (255)
                      ++||+++||||               |+| +|.++|++|+++|++|++++++.+ ++         . ...  ...+|++
T Consensus       186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~---------~-~~~--~~~~dv~  252 (399)
T PRK05579        186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP---------T-PAG--VKRIDVE  252 (399)
T ss_pred             cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc---------C-CCC--cEEEccC
Confidence            56999999999               555 999999999999999999998753 11         0 111  2356776


Q ss_pred             CCcHHHHHHHHHHhcCCCccEEEEecCCCC
Q 025260          115 GDLDEGVERIKEAIEGLDVGVLINNVGISY  144 (255)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~id~lv~nag~~~  144 (255)
                      + .++..+.+.+.+++  +|++|||||+..
T Consensus       253 ~-~~~~~~~v~~~~~~--~DilI~~Aav~d  279 (399)
T PRK05579        253 S-AQEMLDAVLAALPQ--ADIFIMAAAVAD  279 (399)
T ss_pred             C-HHHHHHHHHHhcCC--CCEEEEcccccc
Confidence            5 34555666666664  569999999864

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.70  E-value=2.1e-07  Score=76.80  Aligned_cols=159  Identities=17%  Similarity=0.176  Sum_probs=94.3

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCccE
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGV  135 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id~  135 (255)
                      ++||||+|-||++++.+|.+.|.+|+++.|+..+.+...        ...+   .         ..+.+.+. ...++|+
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~--------~~~v---~---------~~~~~~~~-~~~~~Da   59 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL--------HPNV---T---------LWEGLADA-LTLGIDA   59 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc--------Cccc---c---------ccchhhhc-ccCCCCE
Confidence            589999999999999999999999999999987654311        0000   0         01122222 1226779


Q ss_pred             EEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECCccccccCCCCCchhchHHHH-
Q 025260          136 LINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLYSVYAATKA-  213 (255)
Q Consensus       136 lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS~~~~~~~~~~~~~~Y~asK~-  213 (255)
                      +||-||..-.. ++   .+.+.=+..++    +-...++.+.....+. +++++..-+|..|++  +......|.-... 
T Consensus        60 vINLAG~~I~~-rr---Wt~~~K~~i~~----SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyY--G~~~~~~~tE~~~~  129 (297)
T COG1090          60 VINLAGEPIAE-RR---WTEKQKEEIRQ----SRINTTEKLVELIAASETKPKVLISASAVGYY--GHSGDRVVTEESPP  129 (297)
T ss_pred             EEECCCCcccc-cc---CCHHHHHHHHH----HHhHHHHHHHHHHHhccCCCcEEEecceEEEe--cCCCceeeecCCCC
Confidence            99999975431 21   23332233333    4556666666655433 345555556666777  3333333333332 


Q ss_pred             ---HHHHHHHHHHHHH---ccCCceEEEeeeeeeeeCC
Q 025260          214 ---YIDQFSRSLYVEY---RKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       214 ---al~~~~~~l~~e~---~~~gi~v~~v~Pg~v~T~~  245 (255)
                         ++..+++.+-.|-   ...|+||..++-|.|-.+-
T Consensus       130 g~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~  167 (297)
T COG1090         130 GDDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPD  167 (297)
T ss_pred             CCChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCC
Confidence               3334444433332   2458999999999998753

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.65  E-value=1.7e-07  Score=79.82  Aligned_cols=84  Identities=18%  Similarity=0.302  Sum_probs=60.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCc-EEEEeCCh---hhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNP---DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIK  125 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~-V~l~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  125 (255)
                      ..++|+++|||| ||+|++++..|++.|++ |.+++|+.   ++.++..+++.+.++.  .....+|+.+.     +.+.
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~--~~~~~~d~~~~-----~~~~  194 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPE--CIVNVYDLNDT-----EKLK  194 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCC--ceeEEechhhh-----hHHH
Confidence            356899999999 69999999999999996 99999997   6677777777654433  23344565542     2233


Q ss_pred             HHhcCCCccEEEEecCCC
Q 025260          126 EAIEGLDVGVLINNVGIS  143 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~  143 (255)
                      +.+..  .|++|||..+.
T Consensus       195 ~~~~~--~DilINaTp~G  210 (289)
T PRK12548        195 AEIAS--SDILVNATLVG  210 (289)
T ss_pred             hhhcc--CCEEEEeCCCC
Confidence            33333  36999988654

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.63  E-value=9.3e-07  Score=70.87  Aligned_cols=84  Identities=31%  Similarity=0.424  Sum_probs=61.4

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      .++++++++|+||+|++|+++++.|++.|++|++++|+.+++++..+++.+.. +..  ...+|..+.     +.+.+.+
T Consensus        24 ~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~-~~~--~~~~~~~~~-----~~~~~~~   95 (194)
T cd01078          24 KDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF-GEG--VGAVETSDD-----AARAAAI   95 (194)
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc-CCc--EEEeeCCCH-----HHHHHHH
Confidence            45669999999999999999999999999999999999998888877775433 222  334555543     3344445


Q ss_pred             cCCCccEEEEecCC
Q 025260          129 EGLDVGVLINNVGI  142 (255)
Q Consensus       129 ~~~~id~lv~nag~  142 (255)
                      .+.|  ++|++...
T Consensus        96 ~~~d--iVi~at~~  107 (194)
T cd01078          96 KGAD--VVFAAGAA  107 (194)
T ss_pred             hcCC--EEEECCCC
Confidence            5444  77775543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.57  E-value=3e-07  Score=75.57  Aligned_cols=100  Identities=18%  Similarity=0.162  Sum_probs=68.3

Q ss_pred             cEEEEECCCCc-hHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           54 SWALVTGPTDG-IGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        54 k~vlITGas~g-IG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      .+-.||+.|+| ||.++|++|+++|++|++++|+....        . .+...+..+.++.   .++..+.+.+.+++  
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~--------~-~~~~~v~~i~v~s---~~~m~~~l~~~~~~--   81 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK--------P-EPHPNLSIIEIEN---VDDLLETLEPLVKD--   81 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc--------C-CCCCCeEEEEEec---HHHHHHHHHHHhcC--
Confidence            57789988876 99999999999999999998764210        0 0012344444432   23444555555654  


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHH
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT  169 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~  169 (255)
                      +|++|||||+...  .+....+.+++.+++++|.+..
T Consensus        82 ~DivIh~AAvsd~--~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         82 HDVLIHSMAVSDY--TPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             CCEEEeCCccCCc--eehhhhhhhhhhhhhhhhhhhc
Confidence            5699999998742  3455677888899988876654

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.53  E-value=2.3e-07  Score=81.78  Aligned_cols=109  Identities=15%  Similarity=0.166  Sum_probs=68.0

Q ss_pred             cCCcEEEEECC---------------CCc-hHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECC
Q 025260           51 KYGSWALVTGP---------------TDG-IGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS  114 (255)
Q Consensus        51 ~~gk~vlITGa---------------s~g-IG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  114 (255)
                      ++||.++||||               |+| +|.++|++++++|++|+++.++....          . ...+  ..+|++
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~-~~~~--~~~~v~  249 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------T-PPGV--KSIKVS  249 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------C-CCCc--EEEEec
Confidence            56999999999               667 99999999999999999988765421          1 1222  345665


Q ss_pred             CCcHHHHHHHHH-HhcCCCccEEEEecCCCCCcccccccCC--HHHHHhHhHHhhhHHHHHHHHHh
Q 025260          115 GDLDEGVERIKE-AIEGLDVGVLINNVGISYPYARFFHEVD--QVLLKNLIKVNVEGTTKVTQAVL  177 (255)
Q Consensus       115 ~~~~~~~~~~~~-~~~~~~id~lv~nag~~~~~~~~~~~~~--~~~~~~~~~~N~~~~~~l~~~~l  177 (255)
                      +. ++..+.+.+ .++  ++|++|+|||+...  .+....+  ...-++.+.+|+..+--+++.+.
T Consensus       250 ~~-~~~~~~~~~~~~~--~~D~~i~~Aavsd~--~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~  310 (390)
T TIGR00521       250 TA-EEMLEAALNELAK--DFDIFISAAAVADF--KPKTVFEGKIKKQGEELSLKLVKNPDIIAEVR  310 (390)
T ss_pred             cH-HHHHHHHHHhhcc--cCCEEEEccccccc--cccccccccccccCCceeEEEEeCcHHHHHHH
Confidence            42 333344443 334  46699999999743  2221111  11112234567777666666644

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.48  E-value=4e-06  Score=73.62  Aligned_cols=174  Identities=18%  Similarity=0.124  Sum_probs=105.1

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .+-..|+|+||+|++|+-++++|.++|+.|.++.|+.++.+.... +  .........+..|....+ +...++.+..+.
T Consensus        77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~--~~~d~~~~~v~~~~~~~~-d~~~~~~~~~~~  152 (411)
T KOG1203|consen   77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-V--FFVDLGLQNVEADVVTAI-DILKKLVEAVPK  152 (411)
T ss_pred             CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-c--cccccccceeeecccccc-chhhhhhhhccc
Confidence            345789999999999999999999999999999999887766544 1  111222333444444332 222334444332


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchH
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA  210 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~a  210 (255)
                       ...+++.++|.....    +     ++..-..+.+.|..+++.++...-    =.|++.+||+.+..  .......+..
T Consensus       153 -~~~~v~~~~ggrp~~----e-----d~~~p~~VD~~g~knlvdA~~~aG----vk~~vlv~si~~~~--~~~~~~~~~~  216 (411)
T KOG1203|consen  153 -GVVIVIKGAGGRPEE----E-----DIVTPEKVDYEGTKNLVDACKKAG----VKRVVLVGSIGGTK--FNQPPNILLL  216 (411)
T ss_pred             -cceeEEecccCCCCc----c-----cCCCcceecHHHHHHHHHHHHHhC----CceEEEEEeecCcc--cCCCchhhhh
Confidence             233777777765321    1     122223456668888888874433    34699999887765  3332222221


Q ss_pred             HHHHHHHH-HHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          211 TKAYIDQF-SRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       211 sK~al~~~-~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                        .....- -+....++...|+.-..|.||....+..
T Consensus       217 --~~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~~  251 (411)
T KOG1203|consen  217 --NGLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQDTG  251 (411)
T ss_pred             --hhhhhHHHHhHHHHHHhcCCCcEEEeccccccCCC
Confidence              111111 1233445567799999999998876443

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.46  E-value=5.5e-06  Score=68.15  Aligned_cols=148  Identities=25%  Similarity=0.267  Sum_probs=87.9

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCccE
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGV  135 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id~  135 (255)
                      ++||||+|.+|+.+++.|.+.|++|.+..|+.++  +..+++++.  +.  ..+.+|..|.     +.+.+.+.+.+  .
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~--g~--~vv~~d~~~~-----~~l~~al~g~d--~   67 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQAL--GA--EVVEADYDDP-----ESLVAALKGVD--A   67 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHT--TT--EEEES-TT-H-----HHHHHHHTTCS--E
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhcc--cc--eEeecccCCH-----HHHHHHHcCCc--e
Confidence            6899999999999999999999999999999843  223334433  33  4558887765     67777788555  8


Q ss_pred             EEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCC---CCCchhchHHH
Q 025260          136 LINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS---DPLYSVYAATK  212 (255)
Q Consensus       136 lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~---~~~~~~Y~asK  212 (255)
                      ++++.+...+        ..  .+        ....+++++...    +=.++| .||........   .|. ...-..|
T Consensus        68 v~~~~~~~~~--------~~--~~--------~~~~li~Aa~~a----gVk~~v-~ss~~~~~~~~~~~~p~-~~~~~~k  123 (233)
T PF05368_consen   68 VFSVTPPSHP--------SE--LE--------QQKNLIDAAKAA----GVKHFV-PSSFGADYDESSGSEPE-IPHFDQK  123 (233)
T ss_dssp             EEEESSCSCC--------CH--HH--------HHHHHHHHHHHH----T-SEEE-ESEESSGTTTTTTSTTH-HHHHHHH
T ss_pred             EEeecCcchh--------hh--hh--------hhhhHHHhhhcc----ccceEE-EEEeccccccccccccc-chhhhhh
Confidence            9888875421        11  11        123344554432    234576 45544333111   111 2223456


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          213 AYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       213 ~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      ..++.+.+       ..+++.+.++||+.-.....
T Consensus       124 ~~ie~~l~-------~~~i~~t~i~~g~f~e~~~~  151 (233)
T PF05368_consen  124 AEIEEYLR-------ESGIPYTIIRPGFFMENLLP  151 (233)
T ss_dssp             HHHHHHHH-------HCTSEBEEEEE-EEHHHHHT
T ss_pred             hhhhhhhh-------hccccceeccccchhhhhhh
Confidence            65554332       33899999999987654443

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.36  E-value=2.7e-06  Score=81.83  Aligned_cols=162  Identities=17%  Similarity=0.165  Sum_probs=115.7

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhh--HH-HHHHHHHhhcCCceEEEEEEECCC-CcHHHHHHHHHH
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDK--LK-DVSDSIQAKYAKTQIKSVVVDFSG-DLDEGVERIKEA  127 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~--~~-~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~  127 (255)
                      .|..+|+||-||.|.++|..|.++|+ ++++++|+.-+  -+ .-.+..+.+  +   ..+++|-+| .-.+-+.++.+.
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~--G---VqV~vsT~nitt~~ga~~Li~~ 1842 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRR--G---VQVQVSTSNITTAEGARGLIEE 1842 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhc--C---eEEEEecccchhhhhHHHHHHH
Confidence            68999999999999999999999999 68899988532  11 222334443  2   334444443 112334555554


Q ss_pred             hcCC-CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          128 IEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       128 ~~~~-~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      -... .+..++|-|.+...  +.+++++++.++..-+-.+.|+.++-+.-...--  .-..+|..||...-.  ++.+.+
T Consensus      1843 s~kl~~vGGiFnLA~VLRD--~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~--~LdyFv~FSSvscGR--GN~GQt 1916 (2376)
T KOG1202|consen 1843 SNKLGPVGGIFNLAAVLRD--GLIENQTPKNFKDVAKPKYSGTINLDRVSREICP--ELDYFVVFSSVSCGR--GNAGQT 1916 (2376)
T ss_pred             hhhcccccchhhHHHHHHh--hhhcccChhHHHhhhccceeeeeehhhhhhhhCc--ccceEEEEEeecccC--CCCccc
Confidence            4433 45578888888754  6789999999999999999999887665433211  124688889887766  778899


Q ss_pred             hchHHHHHHHHHHHHHHHH
Q 025260          207 VYAATKAYIDQFSRSLYVE  225 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e  225 (255)
                      .|+-+..+++-+++.=+.+
T Consensus      1917 NYG~aNS~MERiceqRr~~ 1935 (2376)
T KOG1202|consen 1917 NYGLANSAMERICEQRRHE 1935 (2376)
T ss_pred             ccchhhHHHHHHHHHhhhc
Confidence            9999999999998876654

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.31  E-value=1.4e-05  Score=71.43  Aligned_cols=133  Identities=17%  Similarity=0.170  Sum_probs=86.6

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcC---CcEEEEeCChhh--HH---------HHHHHHHhhcCC--ceEEEEEEECC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTG---LNLVLVGRNPDK--LK---------DVSDSIQAKYAK--TQIKSVVVDFS  114 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G---~~V~l~~r~~~~--~~---------~~~~~~~~~~~~--~~~~~~~~d~~  114 (255)
                      ++||+++||||+|.+|+-+.++|.+.-   -++++.-|....  .+         ++-+.+++..|.  .++..+..|.+
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            569999999999999999999999743   267887776432  11         222333443332  56888999988


Q ss_pred             CCcHHHH-HHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECC
Q 025260          115 GDLDEGV-ERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGS  193 (255)
Q Consensus       115 ~~~~~~~-~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS  193 (255)
                      ++.-..- ........  ++|++||+|+...-         .|.++..+.+|..|+.++.+.+.....   --..+.+|.
T Consensus        90 ~~~LGis~~D~~~l~~--eV~ivih~AAtvrF---------de~l~~al~iNt~Gt~~~l~lak~~~~---l~~~vhVST  155 (467)
T KOG1221|consen   90 EPDLGISESDLRTLAD--EVNIVIHSAATVRF---------DEPLDVALGINTRGTRNVLQLAKEMVK---LKALVHVST  155 (467)
T ss_pred             CcccCCChHHHHHHHh--cCCEEEEeeeeecc---------chhhhhhhhhhhHhHHHHHHHHHHhhh---hheEEEeeh
Confidence            6421110 11222223  46699999997521         234677899999999999888766332   134777776


Q ss_pred             cccc
Q 025260          194 GAAI  197 (255)
Q Consensus       194 ~~~~  197 (255)
                      ....
T Consensus       156 Ay~n  159 (467)
T KOG1221|consen  156 AYSN  159 (467)
T ss_pred             hhee
Confidence            5544

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.25  E-value=4.7e-05  Score=63.74  Aligned_cols=131  Identities=21%  Similarity=0.177  Sum_probs=85.7

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      ..++||||+|.+|.+++++|.++|++|.+..|+.+......         ..+.....|+.+.     +.+...+.+.+ 
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~---------~~v~~~~~d~~~~-----~~l~~a~~G~~-   65 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA---------GGVEVVLGDLRDP-----KSLVAGAKGVD-   65 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc---------CCcEEEEeccCCH-----hHHHHHhcccc-
Confidence            36899999999999999999999999999999998876543         3467788888875     45555556544 


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHHHH
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKA  213 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~asK~  213 (255)
                       .+++..+... ...     ..      ............+..-     .+..+++.+|+..+..    .....|..+|.
T Consensus        66 -~~~~i~~~~~-~~~-----~~------~~~~~~~~~~~a~~a~-----~~~~~~~~~s~~~~~~----~~~~~~~~~~~  123 (275)
T COG0702          66 -GVLLISGLLD-GSD-----AF------RAVQVTAVVRAAEAAG-----AGVKHGVSLSVLGADA----ASPSALARAKA  123 (275)
T ss_pred             -EEEEEecccc-ccc-----ch------hHHHHHHHHHHHHHhc-----CCceEEEEeccCCCCC----CCccHHHHHHH
Confidence             7777666542 110     00      1112223333334432     1234577777765433    23467899998


Q ss_pred             HHHHHHHH
Q 025260          214 YIDQFSRS  221 (255)
Q Consensus       214 al~~~~~~  221 (255)
                      ..+...++
T Consensus       124 ~~e~~l~~  131 (275)
T COG0702         124 AVEAALRS  131 (275)
T ss_pred             HHHHHHHh
Confidence            88875443

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.20  E-value=8.9e-06  Score=61.30  Aligned_cols=77  Identities=22%  Similarity=0.448  Sum_probs=57.0

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCc-EEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~-V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      +++++.++|.|+ ||.|++++..|++.|++ |.++.|+.+++++..+++.    ...+.....+          ++.+..
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~----~~~~~~~~~~----------~~~~~~   73 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG----GVNIEAIPLE----------DLEEAL   73 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT----GCSEEEEEGG----------GHCHHH
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC----ccccceeeHH----------HHHHHH
Confidence            467999999998 89999999999999996 9999999999988887772    2334343332          122344


Q ss_pred             cCCCccEEEEecCCC
Q 025260          129 EGLDVGVLINNVGIS  143 (255)
Q Consensus       129 ~~~~id~lv~nag~~  143 (255)
                      .+  .|++||+.+..
T Consensus        74 ~~--~DivI~aT~~~   86 (135)
T PF01488_consen   74 QE--ADIVINATPSG   86 (135)
T ss_dssp             HT--ESEEEE-SSTT
T ss_pred             hh--CCeEEEecCCC
Confidence            43  55999988764

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK09620 hypothetical protein; Provisional

Probab=98.17  E-value=7e-06  Score=67.42  Aligned_cols=83  Identities=17%  Similarity=0.152  Sum_probs=53.9

Q ss_pred             cCCcEEEEECCC----------------CchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECC
Q 025260           51 KYGSWALVTGPT----------------DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS  114 (255)
Q Consensus        51 ~~gk~vlITGas----------------~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  114 (255)
                      ++||.|+||+|.                |.+|.++|++|.++|++|+++++........   .   ........+..   
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~---~---~~~~~~~~V~s---   71 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPND---I---NNQLELHPFEG---   71 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcc---c---CCceeEEEEec---
Confidence            369999999986                9999999999999999999988643211100   0   00111222222   


Q ss_pred             CCcHHHHHHHHHHhcCCCccEEEEecCCCC
Q 025260          115 GDLDEGVERIKEAIEGLDVGVLINNVGISY  144 (255)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~id~lv~nag~~~  144 (255)
                        ..+..+.+.+.+...++|++||+|++..
T Consensus        72 --~~d~~~~l~~~~~~~~~D~VIH~AAvsD   99 (229)
T PRK09620         72 --IIDLQDKMKSIITHEKVDAVIMAAAGSD   99 (229)
T ss_pred             --HHHHHHHHHHHhcccCCCEEEECccccc
Confidence              1122245666665456789999999854

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.15  E-value=1.4e-05  Score=70.10  Aligned_cols=77  Identities=22%  Similarity=0.365  Sum_probs=61.6

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcC-CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G-~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      +.++|.|| |++|+.+|..|+++| .+|.+.||+.++..++.+...     .++...++|..|.     +.+.+.+.+. 
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~-----~~v~~~~vD~~d~-----~al~~li~~~-   69 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIG-----GKVEALQVDAADV-----DALVALIKDF-   69 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhcc-----ccceeEEecccCh-----HHHHHHHhcC-
Confidence            46889999 999999999999999 899999999998887765542     3688889998875     4555555544 


Q ss_pred             ccEEEEecCCC
Q 025260          133 VGVLINNVGIS  143 (255)
Q Consensus       133 id~lv~nag~~  143 (255)
                       |++||++...
T Consensus        70 -d~VIn~~p~~   79 (389)
T COG1748          70 -DLVINAAPPF   79 (389)
T ss_pred             -CEEEEeCCch
Confidence             5899988764

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=98.11  E-value=0.00011  Score=62.65  Aligned_cols=141  Identities=18%  Similarity=0.214  Sum_probs=85.5

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      +|++++|+|+++++|.++++.+.+.|++|+++++++++.+... ++     +.+.   .+|..+.  +..+.+.+..++.
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~-----g~~~---~~~~~~~--~~~~~~~~~~~~~  212 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QA-----GADA---VFNYRAE--DLADRILAATAGQ  212 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc-----CCCE---EEeCCCc--CHHHHHHHHcCCC
Confidence            4899999999999999999999999999999999887655442 21     1111   1333322  3445555544444


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccc--c------c--CC
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAI--V------I--PS  201 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~--~------~--~~  201 (255)
                      ++|++++++|...             .+..+               ..+  +..|+++.+++....  .      .  ..
T Consensus       213 ~~d~vi~~~~~~~-------------~~~~~---------------~~l--~~~g~~v~~~~~~~~~~~~~~~~~~~~~~  262 (325)
T cd08253         213 GVDVIIEVLANVN-------------LAKDL---------------DVL--APGGRIVVYGSGGLRGTIPINPLMAKEAS  262 (325)
T ss_pred             ceEEEEECCchHH-------------HHHHH---------------Hhh--CCCCEEEEEeecCCcCCCChhHHHhcCce
Confidence            6889999886310             01111               112  245888888763210  0      0  00


Q ss_pred             CCCchhchHHHHHHHHHHHHHHHHHccCCceE
Q 025260          202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV  233 (255)
Q Consensus       202 ~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v  233 (255)
                      .+....|..+|.....+.+.+...+....++.
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  294 (325)
T cd08253         263 IRGVLLYTATPEERAAAAEAIAAGLADGALRP  294 (325)
T ss_pred             EEeeehhhcCHHHHHHHHHHHHHHHHCCCccC
Confidence            11223466777778878777776665544543

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.09  E-value=0.00025  Score=55.37  Aligned_cols=152  Identities=16%  Similarity=0.193  Sum_probs=101.6

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG  134 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id  134 (255)
                      .+-|.||||-.|..++++..+||..|.++.||+.+..+.          ..+.+.+.|+.|.     +.+.+.+.+.|  
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~----------~~~~i~q~Difd~-----~~~a~~l~g~D--   64 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR----------QGVTILQKDIFDL-----TSLASDLAGHD--   64 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc----------ccceeecccccCh-----hhhHhhhcCCc--
Confidence            467899999999999999999999999999999886542          3466788888875     44555555445  


Q ss_pred             EEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCC------CC-Cchh
Q 025260          135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS------DP-LYSV  207 (255)
Q Consensus       135 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~------~~-~~~~  207 (255)
                      ++|..-|...+        +.+  +.        +....+.++..++..+..|++.++...+....+      .| +-..
T Consensus        65 aVIsA~~~~~~--------~~~--~~--------~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~e  126 (211)
T COG2910          65 AVISAFGAGAS--------DND--EL--------HSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAE  126 (211)
T ss_pred             eEEEeccCCCC--------Chh--HH--------HHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchh
Confidence            89988776532        111  11        111135555545555678999998876655211      11 1234


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                      |-..-.+..-+.+.|+.|-   ++.-+-++|.-.--|
T Consensus       127 y~~~A~~~ae~L~~Lr~~~---~l~WTfvSPaa~f~P  160 (211)
T COG2910         127 YKPEALAQAEFLDSLRAEK---SLDWTFVSPAAFFEP  160 (211)
T ss_pred             HHHHHHHHHHHHHHHhhcc---CcceEEeCcHHhcCC
Confidence            5555555666677888774   477888888766555

>PLN00106 malate dehydrogenase

Probab=98.09  E-value=5.1e-05  Score=65.48  Aligned_cols=150  Identities=18%  Similarity=0.224  Sum_probs=90.6

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .+.|.|||++|.+|..++..|+.+|.  ++++.|+++.  +....++....+  .....  +++++     +...+.+.+
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~--~g~a~Dl~~~~~--~~~i~--~~~~~-----~d~~~~l~~   86 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANT--PGVAADVSHINT--PAQVR--GFLGD-----DQLGDALKG   86 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCC--CeeEchhhhCCc--CceEE--EEeCC-----CCHHHHcCC
Confidence            47899999999999999999997774  7999999872  221223333221  11222  22221     234555664


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECC-ccc----cc------c
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGS-GAA----IV------I  199 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS-~~~----~~------~  199 (255)
                        .|++|+.||....   +  ..+   +++.+..|......+    .+.+.+....++++++| ..-    ..      .
T Consensus        87 --aDiVVitAG~~~~---~--g~~---R~dll~~N~~i~~~i----~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~  152 (323)
T PLN00106         87 --ADLVIIPAGVPRK---P--GMT---RDDLFNINAGIVKTL----CEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKA  152 (323)
T ss_pred             --CCEEEEeCCCCCC---C--CCC---HHHHHHHHHHHHHHH----HHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHc
Confidence              5599999998532   1  223   455667776665444    44455555444555444 332    11      1


Q ss_pred             CCCCCchhchHHHHHHHHHHHHHHHHHc
Q 025260          200 PSDPLYSVYAATKAYIDQFSRSLYVEYR  227 (255)
Q Consensus       200 ~~~~~~~~Y~asK~al~~~~~~l~~e~~  227 (255)
                      .+.|....|+.++.--..|-..++.++.
T Consensus       153 s~~p~~~viG~~~LDs~Rl~~~lA~~lg  180 (323)
T PLN00106        153 GVYDPKKLFGVTTLDVVRANTFVAEKKG  180 (323)
T ss_pred             CCCCcceEEEEecchHHHHHHHHHHHhC
Confidence            2345567888888666678888888874

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.98  E-value=3.3e-05  Score=69.91  Aligned_cols=77  Identities=25%  Similarity=0.376  Sum_probs=55.3

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh-hhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      ++++|.++|+|+++ +|.++|+.|+++|++|.+.+++. +.+++..+++.+.    .+..+..|..+          +..
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~----~~~~~~~~~~~----------~~~   66 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL----GIELVLGEYPE----------EFL   66 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc----CCEEEeCCcch----------hHh
Confidence            35689999999888 99999999999999999999985 4455545555432    23345555543          122


Q ss_pred             cCCCccEEEEecCCC
Q 025260          129 EGLDVGVLINNVGIS  143 (255)
Q Consensus       129 ~~~~id~lv~nag~~  143 (255)
                      +  ++|++|+++|+.
T Consensus        67 ~--~~d~vv~~~g~~   79 (450)
T PRK14106         67 E--GVDLVVVSPGVP   79 (450)
T ss_pred             h--cCCEEEECCCCC
Confidence            3  356999999975

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.94  E-value=4.1e-05  Score=67.97  Aligned_cols=76  Identities=30%  Similarity=0.517  Sum_probs=56.5

Q ss_pred             EEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      |+|.|| |.+|+.+++.|++++-  +|++.+|+.+++++..+++    ...++....+|+.|.     +.+.+.+.+.| 
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~----~~~~~~~~~~d~~~~-----~~l~~~~~~~d-   69 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL----LGDRVEAVQVDVNDP-----ESLAELLRGCD-   69 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT------TTTTEEEEE--TTTH-----HHHHHHHTTSS-
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc----cccceeEEEEecCCH-----HHHHHHHhcCC-
Confidence            689999 9999999999999874  8999999999988877665    256789999999875     44555566545 


Q ss_pred             cEEEEecCCC
Q 025260          134 GVLINNVGIS  143 (255)
Q Consensus       134 d~lv~nag~~  143 (255)
                       ++||++|..
T Consensus        70 -vVin~~gp~   78 (386)
T PF03435_consen   70 -VVINCAGPF   78 (386)
T ss_dssp             -EEEE-SSGG
T ss_pred             -EEEECCccc
Confidence             999999865

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.92  E-value=9.1e-05  Score=63.88  Aligned_cols=161  Identities=16%  Similarity=0.167  Sum_probs=90.9

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcC--CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G--~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      ++.+.+.|||++|.||..++..|+.+|  .++++.|++.  .+....++....+  ...  ..+.+|.     ....+.+
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~~--~~~--v~~~td~-----~~~~~~l   74 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHIDT--PAK--VTGYADG-----ELWEKAL   74 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcCc--Cce--EEEecCC-----CchHHHh
Confidence            346789999999999999999999666  4799999932  2222224433221  122  2233332     1224555


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccc----------
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV----------  198 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~----------  198 (255)
                      .+  .|++|++||....     ...+   +.+.+..|....    +.+.+.|.+.+..++|+++|-....          
T Consensus        75 ~g--aDvVVitaG~~~~-----~~~t---R~dll~~N~~i~----~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~  140 (321)
T PTZ00325         75 RG--ADLVLICAGVPRK-----PGMT---RDDLFNTNAPIV----RDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLK  140 (321)
T ss_pred             CC--CCEEEECCCCCCC-----CCCC---HHHHHHHHHHHH----HHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhh
Confidence            54  4599999997532     1222   455677776666    4445556666656677777633111          


Q ss_pred             -cCCCCCchhchHHHHHHH--HHHHHHHHHHccCCceEEEeeeeeee
Q 025260          199 -IPSDPLYSVYAATKAYID--QFSRSLYVEYRKSGIDVQCQVLFLLC  242 (255)
Q Consensus       199 -~~~~~~~~~Y~asK~al~--~~~~~l~~e~~~~gi~v~~v~Pg~v~  242 (255)
                       ..+.|....|+.+ . ++  -|-..+++.+   |+....|+ ++|-
T Consensus       141 ~~sg~p~~~viG~g-~-LDs~R~r~~la~~l---~v~~~~V~-~~Vl  181 (321)
T PTZ00325        141 KAGVYDPRKLFGVT-T-LDVVRARKFVAEAL---GMNPYDVN-VPVV  181 (321)
T ss_pred             hccCCChhheeech-h-HHHHHHHHHHHHHh---CcChhheE-EEEE
Confidence             0123444566665 2 44  3444455554   55555554 4443

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.91  E-value=5.1e-05  Score=65.69  Aligned_cols=73  Identities=19%  Similarity=0.322  Sum_probs=53.8

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHc-C-CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKT-G-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~-G-~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      ++++|+|+||||+|.||+.+|++|+++ | .++++.+|+++++++..+++..           .+..        .+.+.
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~-----------~~i~--------~l~~~  212 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG-----------GKIL--------SLEEA  212 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc-----------ccHH--------hHHHH
Confidence            467999999999999999999999864 6 4899999998887776554421           1111        23345


Q ss_pred             hcCCCccEEEEecCCC
Q 025260          128 IEGLDVGVLINNVGIS  143 (255)
Q Consensus       128 ~~~~~id~lv~nag~~  143 (255)
                      +.+  .|++|+.++..
T Consensus       213 l~~--aDiVv~~ts~~  226 (340)
T PRK14982        213 LPE--ADIVVWVASMP  226 (340)
T ss_pred             Hcc--CCEEEECCcCC
Confidence            554  45999999874

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.89  E-value=4.8e-05  Score=65.00  Aligned_cols=82  Identities=23%  Similarity=0.367  Sum_probs=66.8

Q ss_pred             EEEECCCCchHHHHHHHHHH----cCCcEEEEeCChhhHHHHHHHHHhhcCC--ceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           56 ALVTGPTDGIGKSFAFQLAK----TGLNLVLVGRNPDKLKDVSDSIQAKYAK--TQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~----~G~~V~l~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      ++|-||||.-|.-+++++.+    .|..+.+.+||++++++..+++.+..+.  ....++.+|..|+     +.+.+...
T Consensus         8 vVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~-----~Sl~emak   82 (423)
T KOG2733|consen    8 VVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANE-----ASLDEMAK   82 (423)
T ss_pred             EEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCH-----HHHHHHHh
Confidence            89999999999999999999    7889999999999999999999876533  2333888998886     44555555


Q ss_pred             CCCccEEEEecCCCC
Q 025260          130 GLDVGVLINNVGISY  144 (255)
Q Consensus       130 ~~~id~lv~nag~~~  144 (255)
                      +..  +++||+|...
T Consensus        83 ~~~--vivN~vGPyR   95 (423)
T KOG2733|consen   83 QAR--VIVNCVGPYR   95 (423)
T ss_pred             hhE--EEEeccccce
Confidence            545  8999999753

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=97.88  E-value=0.0002  Score=59.72  Aligned_cols=124  Identities=19%  Similarity=0.231  Sum_probs=88.5

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      ..|-++-|.||+|.+|+-++.+|++.|-.|++--|-.+.-.   .+++-.+.-.++.++..|..|+     +.+++....
T Consensus        59 ~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~---r~lkvmGdLGQvl~~~fd~~De-----dSIr~vvk~  130 (391)
T KOG2865|consen   59 VSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDP---RHLKVMGDLGQVLFMKFDLRDE-----DSIRAVVKH  130 (391)
T ss_pred             ccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccch---hheeecccccceeeeccCCCCH-----HHHHHHHHh
Confidence            45789999999999999999999999999999887654322   2222223345788999999987     566666666


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccc
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV  198 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~  198 (255)
                      -+  ++||--|.-.+..    ..+.      -++|..+.-.+.+.+-..-.+    ++|.+|+..+..
T Consensus       131 sN--VVINLIGrd~eTk----nf~f------~Dvn~~~aerlAricke~GVe----rfIhvS~Lganv  182 (391)
T KOG2865|consen  131 SN--VVINLIGRDYETK----NFSF------EDVNVHIAERLARICKEAGVE----RFIHVSCLGANV  182 (391)
T ss_pred             Cc--EEEEeeccccccC----Cccc------ccccchHHHHHHHHHHhhChh----heeehhhccccc
Confidence            66  9999999765421    2222      256777777777776543333    599999876554

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.88  E-value=0.0001  Score=57.10  Aligned_cols=161  Identities=17%  Similarity=0.086  Sum_probs=103.1

Q ss_pred             cccccCCcEEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHH
Q 025260           47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERI  124 (255)
Q Consensus        47 ~~~~~~gk~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  124 (255)
                      ++++.+++.++|.||+|-.|..+.+++++.+-  +|+++.|.+...+++         ...+....+|.+.-     ++.
T Consensus        12 EDf~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at---------~k~v~q~~vDf~Kl-----~~~   77 (238)
T KOG4039|consen   12 EDFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT---------DKVVAQVEVDFSKL-----SQL   77 (238)
T ss_pred             HHHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc---------cceeeeEEechHHH-----HHH
Confidence            45667789999999999999999999999883  899999875432221         34566666776532     344


Q ss_pred             HHHhcCCCccEEEEecCCCCCccc--ccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC
Q 025260          125 KEAIEGLDVGVLINNVGISYPYAR--FFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD  202 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~  202 (255)
                      .+.+.  .+|+++++-|......+  .+...+.+.           .+.+.++    -++++-.+++.+||..+.-  + 
T Consensus        78 a~~~q--g~dV~FcaLgTTRgkaGadgfykvDhDy-----------vl~~A~~----AKe~Gck~fvLvSS~GAd~--s-  137 (238)
T KOG4039|consen   78 ATNEQ--GPDVLFCALGTTRGKAGADGFYKVDHDY-----------VLQLAQA----AKEKGCKTFVLVSSAGADP--S-  137 (238)
T ss_pred             Hhhhc--CCceEEEeecccccccccCceEeechHH-----------HHHHHHH----HHhCCCeEEEEEeccCCCc--c-
Confidence            44444  45699999987542111  122222221           1222333    2345566899999976643  2 


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                       ..--|--.|.-++.=...|..+      ++..++||++..+..+.
T Consensus       138 -SrFlY~k~KGEvE~~v~eL~F~------~~~i~RPG~ll~~R~es  176 (238)
T KOG4039|consen  138 -SRFLYMKMKGEVERDVIELDFK------HIIILRPGPLLGERTES  176 (238)
T ss_pred             -cceeeeeccchhhhhhhhcccc------EEEEecCcceecccccc
Confidence             2456888888777654444333      78899999998766543

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.82  E-value=3e-05  Score=70.09  Aligned_cols=79  Identities=22%  Similarity=0.233  Sum_probs=52.5

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      ++||+++|||+++ +|.++|+.|+++|++|++.+++.....+..+++.+.+  .  .....+  +. .+    +.   .+
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g--~--~~~~~~--~~-~~----~~---~~   67 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEG--I--KVICGS--HP-LE----LL---DE   67 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcC--C--EEEeCC--CC-HH----Hh---cC
Confidence            5689999999986 9999999999999999999987654444444554432  1  221111  11 11    11   11


Q ss_pred             CCccEEEEecCCCCC
Q 025260          131 LDVGVLINNVGISYP  145 (255)
Q Consensus       131 ~~id~lv~nag~~~~  145 (255)
                       ++|.+|+++|+...
T Consensus        68 -~~d~vV~s~gi~~~   81 (447)
T PRK02472         68 -DFDLMVKNPGIPYT   81 (447)
T ss_pred             -cCCEEEECCCCCCC
Confidence             36699999998643

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.80  E-value=0.00049  Score=57.74  Aligned_cols=145  Identities=17%  Similarity=0.212  Sum_probs=85.7

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh-------------------hhHHHHHHHHHhhcCCceEEEE
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKSV  109 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~  109 (255)
                      .+++..|+|.|+ ||+|.++|+.|++.|. ++.++|.+.                   .+.+...+.+.+.+|..++..+
T Consensus        27 kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i  105 (268)
T PRK15116         27 LFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVV  105 (268)
T ss_pred             HhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEE
Confidence            366888888876 5999999999999994 888888652                   1233455666666666666655


Q ss_pred             EEECCCCcHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEE
Q 025260          110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIV  189 (255)
Q Consensus       110 ~~d~~~~~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv  189 (255)
                      +--++.   +   .+.+.+.. ++|++|.+.+...                       .-..+.+.+.    ++ +-.+|
T Consensus       106 ~~~i~~---e---~~~~ll~~-~~D~VIdaiD~~~-----------------------~k~~L~~~c~----~~-~ip~I  150 (268)
T PRK15116        106 DDFITP---D---NVAEYMSA-GFSYVIDAIDSVR-----------------------PKAALIAYCR----RN-KIPLV  150 (268)
T ss_pred             ecccCh---h---hHHHHhcC-CCCEEEEcCCCHH-----------------------HHHHHHHHHH----Hc-CCCEE
Confidence            332221   1   12222221 3557776654210                       0111222221    12 23466


Q ss_pred             EECCccccccCCCCCchhchHHHHHHHHHHHHHHHHHcc-CCce
Q 025260          190 NIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK-SGID  232 (255)
Q Consensus       190 ~vsS~~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~-~gi~  232 (255)
                      ..+...+..+|  .....-..+|.-..-|++.+++|++. +||+
T Consensus       151 ~~gGag~k~dp--~~~~~~di~~t~~~pla~~~R~~lr~~~~~~  192 (268)
T PRK15116        151 TTGGAGGQIDP--TQIQVVDLAKTIQDPLAAKLRERLKSDFGVV  192 (268)
T ss_pred             EECCcccCCCC--CeEEEEeeecccCChHHHHHHHHHHHhhCCC
Confidence            66665555532  12334566777788999999999987 5664

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=97.80  E-value=0.00029  Score=56.79  Aligned_cols=135  Identities=19%  Similarity=0.218  Sum_probs=82.7

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCC---cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGL---NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~---~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      +.++|||++|=+|+++.+.+.+.|.   +.++.                       ..-++|+++.     .+.++.+..
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~-----------------------~skd~DLt~~-----a~t~~lF~~   53 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFI-----------------------GSKDADLTNL-----ADTRALFES   53 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEe-----------------------ccccccccch-----HHHHHHHhc
Confidence            6799999999999999999999885   22221                       2235677764     456666666


Q ss_pred             CCccEEEEecCCCCCccccccc--CCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccc----------
Q 025260          131 LDVGVLINNVGISYPYARFFHE--VDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV----------  198 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~--~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~----------  198 (255)
                      ..+.++|+.|+....   .+..  -..+-|+..+++|    -++++.+..+-.+    ++++..|..-+-          
T Consensus        54 ekPthVIhlAAmVGG---lf~N~~ynldF~r~Nl~in----dNVlhsa~e~gv~----K~vsclStCIfPdkt~yPIdEt  122 (315)
T KOG1431|consen   54 EKPTHVIHLAAMVGG---LFHNNTYNLDFIRKNLQIN----DNVLHSAHEHGVK----KVVSCLSTCIFPDKTSYPIDET  122 (315)
T ss_pred             cCCceeeehHhhhcc---hhhcCCCchHHHhhcceec----hhHHHHHHHhchh----hhhhhcceeecCCCCCCCCCHH
Confidence            677799999987642   2322  3344444444333    2333333332222    234333322111          


Q ss_pred             ----cCCCCCchhchHHHHHHHHHHHHHHHHHc
Q 025260          199 ----IPSDPLYSVYAATKAYIDQFSRSLYVEYR  227 (255)
Q Consensus       199 ----~~~~~~~~~Y~asK~al~~~~~~l~~e~~  227 (255)
                          +|+.|..-.|+-+|..+.-..++.++++.
T Consensus       123 mvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg  155 (315)
T KOG1431|consen  123 MVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHG  155 (315)
T ss_pred             HhccCCCCCCchHHHHHHHHHHHHHHHHHHHhC
Confidence                24555667899999888877799998874

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.79  E-value=0.00019  Score=60.83  Aligned_cols=48  Identities=17%  Similarity=0.378  Sum_probs=42.7

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcC-CcEEEEeCChhhHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQ   98 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G-~~V~l~~r~~~~~~~~~~~~~   98 (255)
                      .+++|.++|+|+ ||+|++++..|++.| .+|.+++|+.++.++..+++.
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            466899999997 899999999999999 689999999998888777664

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.78  E-value=0.00045  Score=56.80  Aligned_cols=149  Identities=19%  Similarity=0.246  Sum_probs=90.1

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh-------------------hhHHHHHHHHHhhcCCceEEEEE
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKSVV  110 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~  110 (255)
                      +++.+|+|.|+ ||+|.++++.|++.|. ++.++|.+.                   .+.+...+.+++.+|..++..++
T Consensus         9 L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~   87 (231)
T cd00755           9 LRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE   87 (231)
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee
Confidence            55788888876 5999999999999997 888887552                   24555667777777777777777


Q ss_pred             EECCCCcHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEE
Q 025260          111 VDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVN  190 (255)
Q Consensus       111 ~d~~~~~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~  190 (255)
                      ..++.+      ...+.+.. ++|++|.+..-.               ..        -..+.+.+..    ++ -.+|.
T Consensus        88 ~~i~~~------~~~~l~~~-~~D~VvdaiD~~---------------~~--------k~~L~~~c~~----~~-ip~I~  132 (231)
T cd00755          88 EFLTPD------NSEDLLGG-DPDFVVDAIDSI---------------RA--------KVALIAYCRK----RK-IPVIS  132 (231)
T ss_pred             eecCHh------HHHHHhcC-CCCEEEEcCCCH---------------HH--------HHHHHHHHHH----hC-CCEEE
Confidence            666532      12222221 355777664321               00        1112232221    22 23555


Q ss_pred             ECCccccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCce--EEEee
Q 025260          191 IGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID--VQCQV  237 (255)
Q Consensus       191 vsS~~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~--v~~v~  237 (255)
                      ..+..+..+|  .....-..+|.-..-+++.+++|+++.|++  +.+|+
T Consensus       133 s~g~g~~~dp--~~i~i~di~~t~~~pla~~~R~~Lrk~~~~~~~~~v~  179 (231)
T cd00755         133 SMGAGGKLDP--TRIRVADISKTSGDPLARKVRKRLRKRGIFFGVPVVY  179 (231)
T ss_pred             EeCCcCCCCC--CeEEEccEeccccCcHHHHHHHHHHHcCCCCCeEEEe
Confidence            4444444422  112344556666788999999999988875  55443

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.74  E-value=0.00016  Score=57.29  Aligned_cols=78  Identities=22%  Similarity=0.335  Sum_probs=50.8

Q ss_pred             cCCcEEEEECC----------------CCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECC
Q 025260           51 KYGSWALVTGP----------------TDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS  114 (255)
Q Consensus        51 ~~gk~vlITGa----------------s~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  114 (255)
                      ++||.||||+|                ||-.|.++|+++.++|++|+++..... +..          ...+..+.++  
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~----------p~~~~~i~v~--   67 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP----------PPGVKVIRVE--   67 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS---------------TTEEEEE-S--
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc----------cccceEEEec--
Confidence            46899999985                688999999999999999999988742 211          2245555544  


Q ss_pred             CCcHHHHHHHHHHhcCCCccEEEEecCCCC
Q 025260          115 GDLDEGVERIKEAIEGLDVGVLINNVGISY  144 (255)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~id~lv~nag~~~  144 (255)
                       ..++..+.+.+.++..  |++|++|++..
T Consensus        68 -sa~em~~~~~~~~~~~--Di~I~aAAVsD   94 (185)
T PF04127_consen   68 -SAEEMLEAVKELLPSA--DIIIMAAAVSD   94 (185)
T ss_dssp             -SHHHHHHHHHHHGGGG--SEEEE-SB--S
T ss_pred             -chhhhhhhhccccCcc--eeEEEecchhh
Confidence             3457777777777765  59999999874

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.70  E-value=0.00025  Score=59.88  Aligned_cols=48  Identities=21%  Similarity=0.432  Sum_probs=42.5

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQA   99 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~   99 (255)
                      .++|.++|+|+ ||+|++++..|++.|++|.+.+|+.++.++..+++.+
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~  162 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQR  162 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhh
Confidence            45889999999 6999999999999999999999999888887777654

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.68  E-value=0.00072  Score=58.60  Aligned_cols=115  Identities=24%  Similarity=0.255  Sum_probs=66.2

Q ss_pred             EEEEECCCCchHHHHHHHHHHcC-------CcEEEEeCChhh--HHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHH
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTG-------LNLVLVGRNPDK--LKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIK  125 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G-------~~V~l~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  125 (255)
                      .++||||+|.+|.+++..|+..+       .+|++.++++..  ++....++....     .....|+...     ..+.
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~-----~~~~~~~~~~-----~~~~   73 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCA-----FPLLKSVVAT-----TDPE   73 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhcc-----ccccCCceec-----CCHH
Confidence            48999999999999999999855       489999997532  221111111100     0000111111     2344


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC--CCcEEEEECC
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR--KKGAIVNIGS  193 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~--~~g~iv~vsS  193 (255)
                      +.+.  +.|++|+.||....     ...+.   ++.++.|    ..+.+...+.+.+.  .++.++++|.
T Consensus        74 ~~l~--~aDiVI~tAG~~~~-----~~~~R---~~l~~~N----~~i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          74 EAFK--DVDVAILVGAMPRK-----EGMER---KDLLKAN----VKIFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             HHhC--CCCEEEEeCCcCCC-----CCCCH---HHHHHHH----HHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            5555  45599999998532     12233   3344444    44556666666655  3677777775

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.67  E-value=0.00025  Score=54.37  Aligned_cols=75  Identities=21%  Similarity=0.418  Sum_probs=53.4

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcC-CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G-~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      .+++.++|+|+ |++|.++++.|.+.| .+|.+.+|+.++.++..+++....       ...+..+.        .+..+
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-------~~~~~~~~--------~~~~~   80 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-------IAIAYLDL--------EELLA   80 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-------cceeecch--------hhccc
Confidence            55889999998 899999999999996 789999999888877766654321       12222221        11133


Q ss_pred             CCCccEEEEecCCC
Q 025260          130 GLDVGVLINNVGIS  143 (255)
Q Consensus       130 ~~~id~lv~nag~~  143 (255)
                        +.|++|++....
T Consensus        81 --~~Dvvi~~~~~~   92 (155)
T cd01065          81 --EADLIINTTPVG   92 (155)
T ss_pred             --cCCEEEeCcCCC
Confidence              456999998764

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.61  E-value=0.00054  Score=59.65  Aligned_cols=65  Identities=20%  Similarity=0.336  Sum_probs=53.2

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh---------------------hhHHHHHHHHHhhcCCceE
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP---------------------DKLKDVSDSIQAKYAKTQI  106 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~---------------------~~~~~~~~~~~~~~~~~~~  106 (255)
                      -++++++|+|.|+ ||+|.++|+.|++.|. ++.++|++.                     .+.+.+.+.+++.++..++
T Consensus        20 ~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i   98 (338)
T PRK12475         20 RKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEI   98 (338)
T ss_pred             HhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEE
Confidence            3467899999997 6899999999999997 899999874                     3556667788888888888


Q ss_pred             EEEEEECC
Q 025260          107 KSVVVDFS  114 (255)
Q Consensus       107 ~~~~~d~~  114 (255)
                      ..+..|++
T Consensus        99 ~~~~~~~~  106 (338)
T PRK12475         99 VPVVTDVT  106 (338)
T ss_pred             EEEeccCC
Confidence            88777765

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.59  E-value=0.0017  Score=56.33  Aligned_cols=79  Identities=27%  Similarity=0.392  Sum_probs=55.5

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      |++|||+||+||+|...++-..+.|++++++..+.++.+ ..++   .+....+     |..++  +..+++++..++..
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~---lGAd~vi-----~y~~~--~~~~~v~~~t~g~g  211 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKE---LGADHVI-----NYREE--DFVEQVRELTGGKG  211 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHh---cCCCEEE-----cCCcc--cHHHHHHHHcCCCC
Confidence            999999999999999998888889988777777766555 3333   2212111     12222  36678887777666


Q ss_pred             ccEEEEecCC
Q 025260          133 VGVLINNVGI  142 (255)
Q Consensus       133 id~lv~nag~  142 (255)
                      +|+++...|.
T Consensus       212 vDvv~D~vG~  221 (326)
T COG0604         212 VDVVLDTVGG  221 (326)
T ss_pred             ceEEEECCCH
Confidence            8899988774

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=97.56  E-value=0.00035  Score=57.01  Aligned_cols=173  Identities=18%  Similarity=0.115  Sum_probs=106.2

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH-HHHHHh---hcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV-SDSIQA---KYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~-~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      .|++||||-+|-=|.-+|+-|+.+|++|.-+-|..+..... ++.+-.   ...+......-.|++|+     .-+.+.+
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDs-----s~L~k~I  102 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDS-----SCLIKLI  102 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccch-----HHHHHHH
Confidence            47999999999999999999999999998877766554432 233321   11134566777888886     3344444


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc---------
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI---------  199 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~---------  199 (255)
                      ..+.++=+.|-|+....      ..+.+--+.+-++...|++.++.+....-+..+ -++---|+ +-...         
T Consensus       103 ~~ikPtEiYnLaAQSHV------kvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~-VrfYQAst-SElyGkv~e~PQsE  174 (376)
T KOG1372|consen  103 STIKPTEVYNLAAQSHV------KVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEK-VRFYQAST-SELYGKVQEIPQSE  174 (376)
T ss_pred             hccCchhhhhhhhhcce------EEEeecccceeeccchhhhhHHHHHHhcCcccc-eeEEeccc-HhhcccccCCCccc
Confidence            55556667787876543      122233355667788899998888765443332 22322232 22221         


Q ss_pred             -CCCCCchhchHHHHHHHHHHHHHHHHH---ccCCceEEEeee
Q 025260          200 -PSDPLYSVYAATKAYIDQFSRSLYVEY---RKSGIDVQCQVL  238 (255)
Q Consensus       200 -~~~~~~~~Y~asK~al~~~~~~l~~e~---~~~gi~v~~v~P  238 (255)
                       .|..+.++|+++|.+--..+-..+..+   +-.||-+|.=+|
T Consensus       175 ~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESP  217 (376)
T KOG1372|consen  175 TTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESP  217 (376)
T ss_pred             CCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCC
Confidence             134457899999976544443444333   334666666665

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.55  E-value=0.00092  Score=56.83  Aligned_cols=50  Identities=20%  Similarity=0.404  Sum_probs=44.2

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhc
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKY  101 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~  101 (255)
                      .++|.|+|.|+ ||.|++++..|++.|+ +|.+++|+.++.++..+++.+..
T Consensus       125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~  175 (284)
T PRK12549        125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARF  175 (284)
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhC
Confidence            45789999997 6899999999999998 79999999999998888886654

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.55  E-value=0.0022  Score=55.47  Aligned_cols=149  Identities=15%  Similarity=0.084  Sum_probs=93.0

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCC-------cEEEEeCChhh--HHHHHHHHHhhc-CCceEEEEEEECCCCcHHHHHH
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGL-------NLVLVGRNPDK--LKDVSDSIQAKY-AKTQIKSVVVDFSGDLDEGVER  123 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~-------~V~l~~r~~~~--~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~  123 (255)
                      +.|.|+|++|.+|..+|..|+.+|.       ++++.|.+++.  ++....++.... +...    .+.++.       .
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~----~~~i~~-------~   71 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLA----EIVITD-------D   71 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccC----ceEEec-------C
Confidence            4689999999999999999998885       69999996543  444444444321 1000    011111       1


Q ss_pred             HHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC--CcEEEEECCccccc---
Q 025260          124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK--KGAIVNIGSGAAIV---  198 (255)
Q Consensus       124 ~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~--~g~iv~vsS~~~~~---  198 (255)
                      -.+.+.  |-|++|.+||....   +  .++..+   .++.    ...+.+.+.+.+.+..  .+.++++|...-..   
T Consensus        72 ~~~~~~--daDivvitaG~~~k---~--g~tR~d---ll~~----N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~  137 (322)
T cd01338          72 PNVAFK--DADWALLVGAKPRG---P--GMERAD---LLKA----NGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALI  137 (322)
T ss_pred             cHHHhC--CCCEEEEeCCCCCC---C--CCcHHH---HHHH----HHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHH
Confidence            234445  45599999997532   1  234332   3343    3556677777776654  67777777532111   


Q ss_pred             ---cC-CCCCchhchHHHHHHHHHHHHHHHHHc
Q 025260          199 ---IP-SDPLYSVYAATKAYIDQFSRSLYVEYR  227 (255)
Q Consensus       199 ---~~-~~~~~~~Y~asK~al~~~~~~l~~e~~  227 (255)
                         .. +.|....|+.++.--..|...+++.+.
T Consensus       138 ~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lg  170 (322)
T cd01338         138 AMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAG  170 (322)
T ss_pred             HHHHcCCCChHheEEehHHHHHHHHHHHHHHhC
Confidence               12 256677899999888888888888874

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.52  E-value=0.00079  Score=54.30  Aligned_cols=83  Identities=20%  Similarity=0.382  Sum_probs=60.4

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCC-------------------hhhHHHHHHHHHhhcCCceEEE
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN-------------------PDKLKDVSDSIQAKYAKTQIKS  108 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~  108 (255)
                      -++++++|+|.| .||+|.++++.|++.|. ++.++|++                   ..+.+.+.+.+++.++..++..
T Consensus        17 ~kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~   95 (202)
T TIGR02356        17 QRLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTA   95 (202)
T ss_pred             HHhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence            346688999998 56999999999999997 89999987                   3456667778888877777776


Q ss_pred             EEEECCCCcHHHHHHHHHHhcCCCccEEEEec
Q 025260          109 VVVDFSGDLDEGVERIKEAIEGLDVGVLINNV  140 (255)
Q Consensus       109 ~~~d~~~~~~~~~~~~~~~~~~~~id~lv~na  140 (255)
                      +..++.+      +.+.+.+.+  .|++|.+.
T Consensus        96 ~~~~i~~------~~~~~~~~~--~D~Vi~~~  119 (202)
T TIGR02356        96 LKERVTA------ENLELLINN--VDLVLDCT  119 (202)
T ss_pred             ehhcCCH------HHHHHHHhC--CCEEEECC
Confidence            6655543      233344554  44787765

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.49  E-value=0.0011  Score=56.92  Aligned_cols=80  Identities=23%  Similarity=0.338  Sum_probs=56.4

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .+++++|+|+++++|.++++.+...|++|+++++++++.+.+. +   .+  ..   ...|..+.  +..+.+.+...+.
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~---~~--~~---~~~~~~~~--~~~~~~~~~~~~~  234 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-E---LG--AD---YVIDYRKE--DFVREVRELTGKR  234 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-H---cC--CC---eEEecCCh--HHHHHHHHHhCCC
Confidence            4789999999999999999999999999999999887655432 2   11  11   11233332  4445555555444


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      ++|++++++|.
T Consensus       235 ~~d~~i~~~g~  245 (342)
T cd08266         235 GVDVVVEHVGA  245 (342)
T ss_pred             CCcEEEECCcH
Confidence            68899999873

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.47  E-value=0.00026  Score=65.29  Aligned_cols=48  Identities=25%  Similarity=0.495  Sum_probs=41.9

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI   97 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~   97 (255)
                      .++++|+++|+|+ ||+|++++..|+++|++|++++|+.++.++..+++
T Consensus       375 ~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        375 SPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             cCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            3466899999999 69999999999999999999999988877766554

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=97.46  E-value=0.0012  Score=56.09  Aligned_cols=80  Identities=23%  Similarity=0.399  Sum_probs=56.3

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      ++++++|+|+++++|.+++..+...|++|+++++++++.+.. +++     +..   ...+..+  .+..+++.+...+.
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----g~~---~~~~~~~--~~~~~~~~~~~~~~  207 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL-----GAD---VAINYRT--EDFAEEVKEATGGR  207 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc-----CCC---EEEeCCc--hhHHHHHHHHhCCC
Confidence            478999999999999999999999999999999987766554 222     111   1122222  24445555555444


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      .+|++++++|.
T Consensus       208 ~~d~vi~~~g~  218 (323)
T cd05276         208 GVDVILDMVGG  218 (323)
T ss_pred             CeEEEEECCch
Confidence            68899999884

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.45  E-value=0.0011  Score=57.65  Aligned_cols=65  Identities=17%  Similarity=0.329  Sum_probs=51.1

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh---------------------hhHHHHHHHHHhhcCCceE
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP---------------------DKLKDVSDSIQAKYAKTQI  106 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~---------------------~~~~~~~~~~~~~~~~~~~  106 (255)
                      -+++++.|+|.|+ ||+|..+|+.|++.|. ++.++|++.                     .+.+.+.+.+++.++..++
T Consensus        20 ~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v   98 (339)
T PRK07688         20 QKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRV   98 (339)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEE
Confidence            3467899999998 7999999999999998 899999863                     3445556677777777777


Q ss_pred             EEEEEECC
Q 025260          107 KSVVVDFS  114 (255)
Q Consensus       107 ~~~~~d~~  114 (255)
                      ..+..+++
T Consensus        99 ~~~~~~~~  106 (339)
T PRK07688         99 EAIVQDVT  106 (339)
T ss_pred             EEEeccCC
Confidence            77666654

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.40  E-value=0.0014  Score=56.97  Aligned_cols=79  Identities=19%  Similarity=0.233  Sum_probs=53.0

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      |++++|+||+|++|...++.....|+ +|+.+++++++.+.+.+++     +.+. .  .|..+.  +..+.+.+..+ .
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l-----Ga~~-v--i~~~~~--~~~~~i~~~~~-~  223 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL-----GFDA-A--INYKTD--NVAERLRELCP-E  223 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc-----CCcE-E--EECCCC--CHHHHHHHHCC-C
Confidence            48999999999999998887778899 7999999887766554433     2211 1  222221  23344444333 3


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      .+|+++++.|.
T Consensus       224 gvd~vid~~g~  234 (345)
T cd08293         224 GVDVYFDNVGG  234 (345)
T ss_pred             CceEEEECCCc
Confidence            57899988773

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.40  E-value=0.0017  Score=53.97  Aligned_cols=84  Identities=18%  Similarity=0.310  Sum_probs=60.2

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh-------------------hhHHHHHHHHHhhcCCceEEE
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKS  108 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~  108 (255)
                      -.+++++|+|.|+ ||+|.++++.|++.|. ++.++|.+.                   .+.+.+.+.+++.++..++..
T Consensus        28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~  106 (245)
T PRK05690         28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIET  106 (245)
T ss_pred             HHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEE
Confidence            3467899999998 8999999999999997 788877542                   345566777888888877777


Q ss_pred             EEEECCCCcHHHHHHHHHHhcCCCccEEEEecC
Q 025260          109 VVVDFSGDLDEGVERIKEAIEGLDVGVLINNVG  141 (255)
Q Consensus       109 ~~~d~~~~~~~~~~~~~~~~~~~~id~lv~nag  141 (255)
                      +...+++      +.+.+.+.+  .|++|.+..
T Consensus       107 ~~~~i~~------~~~~~~~~~--~DiVi~~~D  131 (245)
T PRK05690        107 INARLDD------DELAALIAG--HDLVLDCTD  131 (245)
T ss_pred             EeccCCH------HHHHHHHhc--CCEEEecCC
Confidence            7665543      123334454  447877653

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.39  E-value=0.007  Score=45.84  Aligned_cols=115  Identities=18%  Similarity=0.338  Sum_probs=71.8

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      .+.|+|++|.+|.++|..|...+.  ++++.|++++.++....++............... .+         .+.+.  +
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~---------~~~~~--~   69 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS-GD---------YEALK--D   69 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE-SS---------GGGGT--T
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc-cc---------ccccc--c
Confidence            578999999999999999999884  7999999998888777777654322212211111 11         12333  4


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECC
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGS  193 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS  193 (255)
                      -|++|..||....     ...+.   .+.++.|    ..+.+...+.+.+. .++.++.+|.
T Consensus        70 aDivvitag~~~~-----~g~sR---~~ll~~N----~~i~~~~~~~i~~~~p~~~vivvtN  119 (141)
T PF00056_consen   70 ADIVVITAGVPRK-----PGMSR---LDLLEAN----AKIVKEIAKKIAKYAPDAIVIVVTN  119 (141)
T ss_dssp             ESEEEETTSTSSS-----TTSSH---HHHHHHH----HHHHHHHHHHHHHHSTTSEEEE-SS
T ss_pred             ccEEEEecccccc-----ccccH---HHHHHHh----HhHHHHHHHHHHHhCCccEEEEeCC
Confidence            6699999997532     12333   2334444    44455555555443 4577777654

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK06849 hypothetical protein; Provisional

Probab=97.36  E-value=0.0015  Score=58.12  Aligned_cols=82  Identities=15%  Similarity=0.175  Sum_probs=54.9

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECC-CCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS-GDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~~~~~  130 (255)
                      +.++|||||++.++|.++++.|.+.|++|++++.+........+.+      ...  +.++.. .+.++..+.+.+...+
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~------d~~--~~~p~p~~d~~~~~~~L~~i~~~   74 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV------DGF--YTIPSPRWDPDAYIQALLSIVQR   74 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh------hhe--EEeCCCCCCHHHHHHHHHHHHHH
Confidence            3689999999999999999999999999999998865543221111      112  223211 1223455666665555


Q ss_pred             CCccEEEEecC
Q 025260          131 LDVGVLINNVG  141 (255)
Q Consensus       131 ~~id~lv~nag  141 (255)
                      .++|++|....
T Consensus        75 ~~id~vIP~~e   85 (389)
T PRK06849         75 ENIDLLIPTCE   85 (389)
T ss_pred             cCCCEEEECCh
Confidence            56778887665

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.33  E-value=0.00077  Score=53.21  Aligned_cols=90  Identities=18%  Similarity=0.238  Sum_probs=56.5

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHH------HHHHhhcCCceEEEEEEECCCCcHHHH-
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS------DSIQAKYAKTQIKSVVVDFSGDLDEGV-  121 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~------~~~~~~~~~~~~~~~~~d~~~~~~~~~-  121 (255)
                      ..+.|+++.|.|. |.||+++|+.+...|++|+..+|+........      .++.+.....++..+.+..+++-+..+ 
T Consensus        32 ~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~~~l~ell~~aDiv~~~~plt~~T~~li~  110 (178)
T PF02826_consen   32 RELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEYVSLDELLAQADIVSLHLPLTPETRGLIN  110 (178)
T ss_dssp             S-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEESSHHHHHHH-SEEEE-SSSSTTTTTSBS
T ss_pred             cccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhcccccceeeehhhhcchhhhhhhhhccccccceeee
Confidence            3577999999976 89999999999999999999999987544111      122222224567777777776433333 


Q ss_pred             HHHHHHhcCCCccEEEEecCC
Q 025260          122 ERIKEAIEGLDVGVLINNVGI  142 (255)
Q Consensus       122 ~~~~~~~~~~~id~lv~nag~  142 (255)
                      ++..+.++.   +.++-|.|.
T Consensus       111 ~~~l~~mk~---ga~lvN~aR  128 (178)
T PF02826_consen  111 AEFLAKMKP---GAVLVNVAR  128 (178)
T ss_dssp             HHHHHTSTT---TEEEEESSS
T ss_pred             eeeeecccc---ceEEEeccc
Confidence            333344443   255555654

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.31  E-value=0.002  Score=55.88  Aligned_cols=80  Identities=13%  Similarity=0.232  Sum_probs=53.2

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++++|+||+|++|..++..+..+|++|+.+++++++.+.+.+.+     +.+ ..+  |..++ .+..+.+.+..+ .
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l-----Ga~-~vi--~~~~~-~~~~~~i~~~~~-~  220 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL-----GFD-DAF--NYKEE-PDLDAALKRYFP-N  220 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-----CCc-eeE--EcCCc-ccHHHHHHHhCC-C
Confidence            4899999999999999998888889999999999887766554323     121 112  21111 123334444333 3


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      .+|+++.+.|
T Consensus       221 gvd~v~d~~g  230 (338)
T cd08295         221 GIDIYFDNVG  230 (338)
T ss_pred             CcEEEEECCC
Confidence            5779998876

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.31  E-value=0.0018  Score=57.32  Aligned_cols=83  Identities=20%  Similarity=0.404  Sum_probs=59.0

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCC-------------------hhhHHHHHHHHHhhcCCceEEEE
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN-------------------PDKLKDVSDSIQAKYAKTQIKSV  109 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~  109 (255)
                      ++++++|+|.|+ ||+|.++++.|++.|. ++.++|++                   ..+.+.+.+.+++.++..++..+
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            456788888865 7999999999999998 79999987                   45677777888888777666665


Q ss_pred             EEECCCCcHHHHHHHHHHhcCCCccEEEEecC
Q 025260          110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNVG  141 (255)
Q Consensus       110 ~~d~~~~~~~~~~~~~~~~~~~~id~lv~nag  141 (255)
                      ...+.+   +   .+.+.+.+  .|++|++..
T Consensus       211 ~~~~~~---~---~~~~~~~~--~D~Vv~~~d  234 (376)
T PRK08762        211 QERVTS---D---NVEALLQD--VDVVVDGAD  234 (376)
T ss_pred             eccCCh---H---HHHHHHhC--CCEEEECCC
Confidence            544432   1   22333343  458887664

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.30  E-value=0.0087  Score=51.45  Aligned_cols=113  Identities=20%  Similarity=0.382  Sum_probs=71.2

Q ss_pred             EEEEECCCCchHHHHHHHHHHcC--CcEEEEeCChhhHHHHHHHHHhhcC--CceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYA--KTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G--~~V~l~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .+.|.|+ |++|.++|..|+.+|  .+|+++++++++.+....++.+...  ....... .   .+        .+.+. 
T Consensus         2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~---~~--------~~~l~-   67 (306)
T cd05291           2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A---GD--------YSDCK-   67 (306)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c---CC--------HHHhC-
Confidence            5788886 899999999999999  4799999999988888777765421  1111111 1   11        11234 


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCc
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSG  194 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~  194 (255)
                       +.|++|+++|....     ...+..   ..++.|    ..+++...+.+.+.. .+.++++|..
T Consensus        68 -~aDIVIitag~~~~-----~g~~R~---dll~~N----~~i~~~~~~~i~~~~~~~~vivvsNP  119 (306)
T cd05291          68 -DADIVVITAGAPQK-----PGETRL---DLLEKN----AKIMKSIVPKIKASGFDGIFLVASNP  119 (306)
T ss_pred             -CCCEEEEccCCCCC-----CCCCHH---HHHHHH----HHHHHHHHHHHHHhCCCeEEEEecCh
Confidence             45599999997532     123332   233333    445566666565543 6777777753

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.30  E-value=0.003  Score=51.36  Aligned_cols=83  Identities=19%  Similarity=0.326  Sum_probs=59.8

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh------------------hhHHHHHHHHHhhcCCceEEEE
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP------------------DKLKDVSDSIQAKYAKTQIKSV  109 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~------------------~~~~~~~~~~~~~~~~~~~~~~  109 (255)
                      -++++++|+|.|+ ||+|.++++.|++.|. ++.+.|.+.                  .+.+.+.+.+++.++..++..+
T Consensus        24 ~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~  102 (212)
T PRK08644         24 EKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAH  102 (212)
T ss_pred             HHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence            3467889999996 7999999999999998 599988772                  3555666777777777777777


Q ss_pred             EEECCCCcHHHHHHHHHHhcCCCccEEEEec
Q 025260          110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNV  140 (255)
Q Consensus       110 ~~d~~~~~~~~~~~~~~~~~~~~id~lv~na  140 (255)
                      ...++++      .+.+.+.+  .|++|.+.
T Consensus       103 ~~~i~~~------~~~~~~~~--~DvVI~a~  125 (212)
T PRK08644        103 NEKIDED------NIEELFKD--CDIVVEAF  125 (212)
T ss_pred             eeecCHH------HHHHHHcC--CCEEEECC
Confidence            7666542      23333444  44777663

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.28  E-value=0.012  Score=50.74  Aligned_cols=115  Identities=17%  Similarity=0.318  Sum_probs=74.9

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhcCC-ceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAK-TQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      .++.+.|+|+ |++|.++|..++.+|.  ++.+.|++++.++....++....+. ..... ..   ++        .+.+
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i-~~---~~--------~~~~   71 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKI-YA---GD--------YSDC   71 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEE-Ee---CC--------HHHh
Confidence            4788999998 9999999999999986  7999999999888888887754321 11111 11   11        2334


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECC
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGS  193 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS  193 (255)
                      .  +-|++|..||....     ..++..   ..++.|    ..+.+.+.+.+.+. ..+.++++|.
T Consensus        72 ~--~adivIitag~~~k-----~g~~R~---dll~~N----~~i~~~i~~~i~~~~~~~~vivvsN  123 (315)
T PRK00066         72 K--DADLVVITAGAPQK-----PGETRL---DLVEKN----LKIFKSIVGEVMASGFDGIFLVASN  123 (315)
T ss_pred             C--CCCEEEEecCCCCC-----CCCCHH---HHHHHH----HHHHHHHHHHHHHhCCCeEEEEccC
Confidence            4  45599999998532     123433   233333    44555556656554 3677777775

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.28  E-value=0.0026  Score=55.85  Aligned_cols=65  Identities=15%  Similarity=0.318  Sum_probs=52.2

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh-------------------hhHHHHHHHHHhhcCCceEEE
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKS  108 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~  108 (255)
                      -++++++|+|.|+ ||+|.++++.|++.|. ++.++|.+.                   .+.+.+.+.+++.+|..++..
T Consensus        24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~  102 (355)
T PRK05597         24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTV  102 (355)
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEE
Confidence            3467899999988 7999999999999997 788888663                   456677788888888887777


Q ss_pred             EEEECC
Q 025260          109 VVVDFS  114 (255)
Q Consensus       109 ~~~d~~  114 (255)
                      +..+++
T Consensus       103 ~~~~i~  108 (355)
T PRK05597        103 SVRRLT  108 (355)
T ss_pred             EEeecC
Confidence            665554

>cd00704 MDH Malate dehydrogenase

Probab=97.28  E-value=0.0034  Score=54.36  Aligned_cols=114  Identities=21%  Similarity=0.237  Sum_probs=67.4

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCC-------cEEEEeCCh--hhHHHHHHHHHhhc-CCceEEEEEEECCCCcHHHHHHH
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGL-------NLVLVGRNP--DKLKDVSDSIQAKY-AKTQIKSVVVDFSGDLDEGVERI  124 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~-------~V~l~~r~~--~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~  124 (255)
                      .+.||||+|.+|..++..|+..|.       .+++.|+++  +.++....++.... +...    ...++       ...
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~----~~~i~-------~~~   70 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLK----GVVIT-------TDP   70 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccC----CcEEe-------cCh
Confidence            478999999999999999998763       399999987  43332222222110 0000    00111       123


Q ss_pred             HHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC--CCcEEEEECC
Q 025260          125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR--KKGAIVNIGS  193 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~--~~g~iv~vsS  193 (255)
                      .+.+.+  .|++|+.||....   +  ..+..   +.++.    ...+++.+.+.+.+.  +++.++++|.
T Consensus        71 ~~~~~~--aDiVVitAG~~~~---~--g~tR~---dll~~----N~~i~~~i~~~i~~~~~~~~iiivvsN  127 (323)
T cd00704          71 EEAFKD--VDVAILVGAFPRK---P--GMERA---DLLRK----NAKIFKEQGEALNKVAKPTVKVLVVGN  127 (323)
T ss_pred             HHHhCC--CCEEEEeCCCCCC---c--CCcHH---HHHHH----hHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence            455554  5599999997532   1  23332   23343    455667777777666  3667777764

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.24  E-value=0.0023  Score=55.14  Aligned_cols=42  Identities=14%  Similarity=0.178  Sum_probs=36.4

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~   93 (255)
                      .|++++|+||+|++|..+++.+...|++|+.+++++++.+.+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~  179 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL  179 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            489999999999999998888778899999999988765544

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=97.23  E-value=0.0038  Score=52.63  Aligned_cols=106  Identities=23%  Similarity=0.312  Sum_probs=73.6

Q ss_pred             CcEEEEECCCCchHHHHHHHHH-HcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLA-KTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la-~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      |++++|+||+|..|.-. -++| -+|++|+-++-.+++..-+.+++.-   +.     ..|-..+  ++.+.++++.++ 
T Consensus       151 GetvvVSaAaGaVGsvv-gQiAKlkG~rVVGiaGg~eK~~~l~~~lGf---D~-----~idyk~~--d~~~~L~~a~P~-  218 (340)
T COG2130         151 GETVVVSAAAGAVGSVV-GQIAKLKGCRVVGIAGGAEKCDFLTEELGF---DA-----GIDYKAE--DFAQALKEACPK-  218 (340)
T ss_pred             CCEEEEEecccccchHH-HHHHHhhCCeEEEecCCHHHHHHHHHhcCC---ce-----eeecCcc--cHHHHHHHHCCC-
Confidence            99999999999999654 4555 4799999999998887766555420   11     1222222  666788888775 


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP  200 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~  200 (255)
                      .||+.+-|.|.-.             +               .+.++.|  +..+||+.++-++.+..+
T Consensus       219 GIDvyfeNVGg~v-------------~---------------DAv~~~l--n~~aRi~~CG~IS~YN~~  257 (340)
T COG2130         219 GIDVYFENVGGEV-------------L---------------DAVLPLL--NLFARIPVCGAISQYNAP  257 (340)
T ss_pred             CeEEEEEcCCchH-------------H---------------HHHHHhh--ccccceeeeeehhhcCCC
Confidence            6889999998521             1               2344545  345889998888877744

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=97.22  E-value=0.0031  Score=53.68  Aligned_cols=79  Identities=22%  Similarity=0.373  Sum_probs=55.0

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      +|++++|+|+++++|.+++..+...|++|+++.+++++.+.. +++     +.+.   ..+..+  .+..+.+.+..++.
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~~---~~~~~~--~~~~~~~~~~~~~~  207 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EAL-----GADI---AINYRE--EDFVEVVKAETGGK  207 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCcE---EEecCc--hhHHHHHHHHcCCC
Confidence            478999999999999999999999999999999987765533 222     1111   112221  24445566555544


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      .+|++++++|
T Consensus       208 ~~d~~i~~~~  217 (325)
T TIGR02824       208 GVDVILDIVG  217 (325)
T ss_pred             CeEEEEECCc
Confidence            6889999887

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=97.22  E-value=0.0041  Score=50.05  Aligned_cols=81  Identities=21%  Similarity=0.377  Sum_probs=55.4

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCC---hh---------------hHHHHHHHHHhhcCCceEEEEE
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN---PD---------------KLKDVSDSIQAKYAKTQIKSVV  110 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~---~~---------------~~~~~~~~~~~~~~~~~~~~~~  110 (255)
                      +++.++|+|.|+ ||+|..+|+.|++.|. ++++.|++   .+               +.+...+.+++.++..++..+.
T Consensus        18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~   96 (200)
T TIGR02354        18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYD   96 (200)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEee
Confidence            467899999998 6899999999999998 69999887   22               2233445556666666666666


Q ss_pred             EECCCCcHHHHHHHHHHhcCCCccEEEEe
Q 025260          111 VDFSGDLDEGVERIKEAIEGLDVGVLINN  139 (255)
Q Consensus       111 ~d~~~~~~~~~~~~~~~~~~~~id~lv~n  139 (255)
                      .++++      +.+.+.+.+  .|++|.+
T Consensus        97 ~~i~~------~~~~~~~~~--~DlVi~a  117 (200)
T TIGR02354        97 EKITE------ENIDKFFKD--ADIVCEA  117 (200)
T ss_pred             eeCCH------hHHHHHhcC--CCEEEEC
Confidence            66653      233344443  3466654

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK05086 malate dehydrogenase; Provisional

Probab=97.21  E-value=0.003  Score=54.47  Aligned_cols=115  Identities=23%  Similarity=0.261  Sum_probs=62.4

Q ss_pred             cEEEEECCCCchHHHHHHHHHH-c--CCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAK-T--GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~-~--G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      +.++|.||+|++|.+++..+.. .  +..+++.+|++. .+...-++...  ..... +.....       +.+.+.+. 
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~--~~~~~-i~~~~~-------~d~~~~l~-   68 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHI--PTAVK-IKGFSG-------EDPTPALE-   68 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcC--CCCce-EEEeCC-------CCHHHHcC-
Confidence            4689999999999999998855 3  347888898754 21111122211  10111 111101       12334444 


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECC
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGS  193 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS  193 (255)
                       +.|++|.++|.....     ..+.   ...+..|....    +.+.+.|.+....++|.+.|
T Consensus        69 -~~DiVIitaG~~~~~-----~~~R---~dll~~N~~i~----~~ii~~i~~~~~~~ivivvs  118 (312)
T PRK05086         69 -GADVVLISAGVARKP-----GMDR---SDLFNVNAGIV----KNLVEKVAKTCPKACIGIIT  118 (312)
T ss_pred             -CCCEEEEcCCCCCCC-----CCCH---HHHHHHHHHHH----HHHHHHHHHhCCCeEEEEcc
Confidence             456999999985431     2222   33455555444    55555566555445555544

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.20  E-value=0.0027  Score=53.94  Aligned_cols=50  Identities=18%  Similarity=0.359  Sum_probs=43.3

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhc
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKY  101 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~  101 (255)
                      .++|.++|.|+ ||-|++++..|++.|+ +|.+.+|+.++.++..+++.+.+
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~  175 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAV  175 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc
Confidence            45899999998 8999999999999997 79999999999988887775443

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.20  E-value=0.0031  Score=54.59  Aligned_cols=111  Identities=21%  Similarity=0.232  Sum_probs=66.5

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCC-------cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCc----HHH--H
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGL-------NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDL----DEG--V  121 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~-------~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~--~  121 (255)
                      ++.|+|++|.+|..++..|+.+|.       .+++.|++++..              .......|+.|..    ...  .
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~--------------~a~g~~~Dl~d~~~~~~~~~~~~   66 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK--------------VLEGVVMELMDCAFPLLDGVVPT   66 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc--------------ccceeEeehhcccchhcCceecc
Confidence            378999999999999999998664       499999975531              0112223333221    000  0


Q ss_pred             HHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC--CCcEEEEECC
Q 025260          122 ERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR--KKGAIVNIGS  193 (255)
Q Consensus       122 ~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~--~~g~iv~vsS  193 (255)
                      ....+.+.  +.|++|+.||....     ...+   .++.++.|    ..+++.+.+.+.+.  +++.++++|.
T Consensus        67 ~~~~~~~~--~aDiVVitAG~~~~-----~~~t---r~~ll~~N----~~i~k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        67 HDPAVAFT--DVDVAILVGAFPRK-----EGME---RRDLLSKN----VKIFKEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             CChHHHhC--CCCEEEEcCCCCCC-----CCCc---HHHHHHHH----HHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence            12234445  45699999997532     1222   34454544    55667777777665  3577777764

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.17  E-value=0.0012  Score=53.10  Aligned_cols=47  Identities=19%  Similarity=0.238  Sum_probs=40.8

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDS   96 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~   96 (255)
                      .+++||+++|+|.+ .+|..+|+.|.+.|++|++.+++++.+++..++
T Consensus        24 ~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          24 DSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            45679999999996 899999999999999999999998877766554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=97.17  E-value=0.0051  Score=48.36  Aligned_cols=75  Identities=17%  Similarity=0.402  Sum_probs=52.8

Q ss_pred             EEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh------------------hhHHHHHHHHHhhcCCceEEEEEEECCCC
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP------------------DKLKDVSDSIQAKYAKTQIKSVVVDFSGD  116 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~-~V~l~~r~~------------------~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  116 (255)
                      |+|.|+ ||+|.++++.|++.|. ++.+.|.+.                  .+.+...+.+++.++..++..+...+.++
T Consensus         2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~~   80 (174)
T cd01487           2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDEN   80 (174)
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecChh
Confidence            677775 8999999999999998 699998875                  34455566677777777777776665532


Q ss_pred             cHHHHHHHHHHhcCCCccEEEEe
Q 025260          117 LDEGVERIKEAIEGLDVGVLINN  139 (255)
Q Consensus       117 ~~~~~~~~~~~~~~~~id~lv~n  139 (255)
                            .+.+.+++  .|++|.+
T Consensus        81 ------~~~~~l~~--~DlVi~~   95 (174)
T cd01487          81 ------NLEGLFGD--CDIVVEA   95 (174)
T ss_pred             ------hHHHHhcC--CCEEEEC
Confidence                  23333444  4477765

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=97.16  E-value=0.0035  Score=53.89  Aligned_cols=78  Identities=18%  Similarity=0.243  Sum_probs=52.6

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      +|.+++|+||++++|..+++.....|++|+.+++++++.+.+.+ +     +.+ ..+  |..+.  +..+++.+..+ .
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~-----Ga~-~vi--~~~~~--~~~~~v~~~~~-~  210 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-L-----GFD-AVF--NYKTV--SLEEALKEAAP-D  210 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-----CCC-EEE--eCCCc--cHHHHHHHHCC-C
Confidence            48999999999999999888888899999999988876554432 2     221 112  22221  33344544434 3


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      .+|+++.+.|
T Consensus       211 gvd~vld~~g  220 (329)
T cd08294         211 GIDCYFDNVG  220 (329)
T ss_pred             CcEEEEECCC
Confidence            5789998776

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.15  E-value=0.0029  Score=55.35  Aligned_cols=80  Identities=13%  Similarity=0.241  Sum_probs=52.8

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++++|+||+|++|...+..+...|++|+.+++++++.+.+.+++     +.+ ..+  |..+. .+..+.+.+..++ 
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l-----Ga~-~vi--~~~~~-~~~~~~i~~~~~~-  227 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-----GFD-EAF--NYKEE-PDLDAALKRYFPE-  227 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc-----CCC-EEE--ECCCc-ccHHHHHHHHCCC-
Confidence            4899999999999999998888889999999998887765544333     221 112  22211 1222344443332 


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      .+|+++.+.|
T Consensus       228 gvD~v~d~vG  237 (348)
T PLN03154        228 GIDIYFDNVG  237 (348)
T ss_pred             CcEEEEECCC
Confidence            5779998877

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.14  E-value=0.0097  Score=49.28  Aligned_cols=78  Identities=22%  Similarity=0.302  Sum_probs=51.2

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      +|++++|+|+++ +|.++++.+...|.+|+.+++++++.+.. ++   .+  .. ..  .|..+.  +..+.+. ..+..
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g--~~-~~--~~~~~~--~~~~~~~-~~~~~  200 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KE---LG--AD-HV--IDYKEE--DLEEELR-LTGGG  200 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HH---hC--Cc-ee--ccCCcC--CHHHHHH-HhcCC
Confidence            488999999999 99999999989999999999987665443 22   21  11 11  122221  2223333 33444


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      .+|++++++|.
T Consensus       201 ~~d~vi~~~~~  211 (271)
T cd05188         201 GADVVIDAVGG  211 (271)
T ss_pred             CCCEEEECCCC
Confidence            68899998874

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.09  E-value=0.0046  Score=50.79  Aligned_cols=83  Identities=23%  Similarity=0.357  Sum_probs=59.7

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCC-------------------hhhHHHHHHHHHhhcCCceEEEE
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN-------------------PDKLKDVSDSIQAKYAKTQIKSV  109 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~  109 (255)
                      ++++++|+|.| .||+|.++|+.|++.|. ++.++|.+                   ..+.+.+.+.+++.+|..++..+
T Consensus        18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            46688999998 56999999999999998 78887543                   23566677788888887778777


Q ss_pred             EEECCCCcHHHHHHHHHHhcCCCccEEEEecC
Q 025260          110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNVG  141 (255)
Q Consensus       110 ~~d~~~~~~~~~~~~~~~~~~~~id~lv~nag  141 (255)
                      ..+++.      +.+.+.+.+  .|++|.+..
T Consensus        97 ~~~i~~------~~~~~~~~~--~DvVi~~~d  120 (228)
T cd00757          97 NERLDA------ENAEELIAG--YDLVLDCTD  120 (228)
T ss_pred             cceeCH------HHHHHHHhC--CCEEEEcCC
Confidence            766642      223333443  458887764

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.09  E-value=0.0029  Score=53.79  Aligned_cols=48  Identities=31%  Similarity=0.515  Sum_probs=41.7

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQA   99 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~   99 (255)
                      +++|.++|.|+ ||.|++++..|++.|+ +|.+++|+.++.++..+++..
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~  171 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQ  171 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhh
Confidence            45889999976 8999999999999997 799999999988888776643

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.08  E-value=0.0084  Score=45.38  Aligned_cols=77  Identities=21%  Similarity=0.457  Sum_probs=54.3

Q ss_pred             EEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh-------------------hhHHHHHHHHHhhcCCceEEEEEEECCC
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKSVVVDFSG  115 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~-~V~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~d~~~  115 (255)
                      ++|.|+ ||+|.++++.|++.|. ++.++|.+.                   .+.+...+.+++.+|..++..+..+..+
T Consensus         2 VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~   80 (143)
T cd01483           2 VLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISE   80 (143)
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecCh
Confidence            678887 8999999999999998 788887551                   2455566777777777777777776654


Q ss_pred             CcHHHHHHHHHHhcCCCccEEEEecC
Q 025260          116 DLDEGVERIKEAIEGLDVGVLINNVG  141 (255)
Q Consensus       116 ~~~~~~~~~~~~~~~~~id~lv~nag  141 (255)
                      .      ...+.+.+  .|++|.+..
T Consensus        81 ~------~~~~~~~~--~diVi~~~d   98 (143)
T cd01483          81 D------NLDDFLDG--VDLVIDAID   98 (143)
T ss_pred             h------hHHHHhcC--CCEEEECCC
Confidence            2      11333444  447776654

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.06  E-value=0.0011  Score=53.86  Aligned_cols=159  Identities=15%  Similarity=0.226  Sum_probs=94.7

Q ss_pred             CcEEEEECCCCchHHHHHHHHHH-cCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAK-TGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~-~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      -..++|||+-|-+|.++|.-|-. .|- .|++.+-......     .-+.  +   -++-.|+.|.     +.+.+..-.
T Consensus        44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~-----V~~~--G---PyIy~DILD~-----K~L~eIVVn  108 (366)
T KOG2774|consen   44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPAN-----VTDV--G---PYIYLDILDQ-----KSLEEIVVN  108 (366)
T ss_pred             CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchh-----hccc--C---Cchhhhhhcc-----ccHHHhhcc
Confidence            57899999999999999999864 465 6777664433211     1111  1   1334455553     233333333


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC-------
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP-------  203 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~-------  203 (255)
                      ..+|.+||-.+....    +.|.   ..--..++|..|..++++.+..+      .--+|+-|+-|.++|..|       
T Consensus       109 ~RIdWL~HfSALLSA----vGE~---NVpLA~~VNI~GvHNil~vAa~~------kL~iFVPSTIGAFGPtSPRNPTPdl  175 (366)
T KOG2774|consen  109 KRIDWLVHFSALLSA----VGET---NVPLALQVNIRGVHNILQVAAKH------KLKVFVPSTIGAFGPTSPRNPTPDL  175 (366)
T ss_pred             cccceeeeHHHHHHH----hccc---CCceeeeecchhhhHHHHHHHHc------CeeEeecccccccCCCCCCCCCCCe
Confidence            357799987665432    1121   12234689999999988876442      223566665555443222       


Q ss_pred             ----CchhchHHHHHHHHHHHHHHHHHccCCceEEEe-eeeeee
Q 025260          204 ----LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQ-VLFLLC  242 (255)
Q Consensus       204 ----~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v-~Pg~v~  242 (255)
                          ..+.|+.||.-.+-+.+.+...+   |+.+-+. .||.+.
T Consensus       176 tIQRPRTIYGVSKVHAEL~GEy~~hrF---g~dfr~~rfPg~is  216 (366)
T KOG2774|consen  176 TIQRPRTIYGVSKVHAELLGEYFNHRF---GVDFRSMRFPGIIS  216 (366)
T ss_pred             eeecCceeechhHHHHHHHHHHHHhhc---CccceecccCcccc
Confidence                14679999988887777776665   5555444 345443

>PRK14968 putative methyltransferase; Provisional

Probab=97.05  E-value=0.019  Score=45.19  Aligned_cols=78  Identities=22%  Similarity=0.251  Sum_probs=53.7

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCce-EEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQ-IKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      +++.++-.|++.|.   ++..+++++.+|+.++++++..+.+.+.+.......+ +.++.+|..+.       +    ..
T Consensus        23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-------~----~~   88 (188)
T PRK14968         23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP-------F----RG   88 (188)
T ss_pred             CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc-------c----cc
Confidence            47789999988776   6666666789999999999888877777665432211 66666665432       1    11


Q ss_pred             CCccEEEEecCCC
Q 025260          131 LDVGVLINNVGIS  143 (255)
Q Consensus       131 ~~id~lv~nag~~  143 (255)
                      ..+|.++.|....
T Consensus        89 ~~~d~vi~n~p~~  101 (188)
T PRK14968         89 DKFDVILFNPPYL  101 (188)
T ss_pred             cCceEEEECCCcC
Confidence            1567999887654

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.02  E-value=0.0064  Score=51.84  Aligned_cols=80  Identities=16%  Similarity=0.230  Sum_probs=54.6

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      ++++++|+|+++++|.+++..+...|++|++++++.++.+.. .+.     +.. ..+  +..+  ....+.+.+..++.
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~~~--~~~~--~~~~~~~~~~~~~~  212 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LAL-----GAA-HVI--VTDE--EDLVAEVLRITGGK  212 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc-----CCC-EEE--ecCC--ccHHHHHHHHhCCC
Confidence            478999999999999999999999999999999987765544 221     111 112  2111  13334455544444


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      .+|++++++|.
T Consensus       213 ~~d~vi~~~~~  223 (328)
T cd08268         213 GVDVVFDPVGG  223 (328)
T ss_pred             CceEEEECCch
Confidence            68899998774

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.02  E-value=0.067  Score=45.77  Aligned_cols=42  Identities=29%  Similarity=0.324  Sum_probs=36.4

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK   91 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~   91 (255)
                      .++.|++++|.|. |++|+.++..|.+.|++|.+.+|+.+..+
T Consensus       148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~  189 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLA  189 (296)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            3456999999997 67999999999999999999999976543

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.01  E-value=0.0039  Score=53.56  Aligned_cols=42  Identities=33%  Similarity=0.452  Sum_probs=37.0

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~   93 (255)
                      .+++++|+||++++|.++++.+...|++|+.+++++++.+..
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~  203 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL  203 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            478999999999999999999999999999999887665443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.99  E-value=0.0063  Score=51.83  Aligned_cols=50  Identities=22%  Similarity=0.307  Sum_probs=39.9

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh---hhHHHHHHHHHh
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP---DKLKDVSDSIQA   99 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~---~~~~~~~~~~~~   99 (255)
                      .+.++|+++|.|+ ||-+++++..|+..|+ +|.+.+|++   ++.++..+++.+
T Consensus       120 ~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~  173 (288)
T PRK12749        120 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE  173 (288)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhh
Confidence            3456899999997 6679999999999997 899999995   466666665543

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=96.99  E-value=0.0073  Score=51.72  Aligned_cols=80  Identities=25%  Similarity=0.373  Sum_probs=55.7

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .+.+++|+|+++++|.+++..+...|++|+.++++.++.+.+ +++     +.. .  ..|..+.  +..+++.+..++.
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~--~~~~~~~--~~~~~~~~~~~~~  210 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL-----GAD-V--AVDYTRP--DWPDQVREALGGG  210 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc-----CCC-E--EEecCCc--cHHHHHHHHcCCC
Confidence            378999999999999999999999999999999988765543 222     111 1  1222222  3445565555555


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      ++|+++++.|.
T Consensus       211 ~~d~vl~~~g~  221 (324)
T cd08244         211 GVTVVLDGVGG  221 (324)
T ss_pred             CceEEEECCCh
Confidence            68899998763

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=96.97  E-value=0.0017  Score=55.32  Aligned_cols=78  Identities=23%  Similarity=0.271  Sum_probs=59.8

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      ...+|-||+|.-|.-+|++|+++|-+-.+.+||..++..+.+++..     ..-.+++.+.    .   .+.+...+.+ 
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~-----~~~~~p~~~p----~---~~~~~~~~~~-   73 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGP-----EAAVFPLGVP----A---ALEAMASRTQ-   73 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCc-----cccccCCCCH----H---HHHHHHhcce-
Confidence            4588999999999999999999999999999999999988887733     3334444442    2   3444445445 


Q ss_pred             cEEEEecCCCCC
Q 025260          134 GVLINNVGISYP  145 (255)
Q Consensus       134 d~lv~nag~~~~  145 (255)
                       +|+||+|....
T Consensus        74 -VVlncvGPyt~   84 (382)
T COG3268          74 -VVLNCVGPYTR   84 (382)
T ss_pred             -EEEeccccccc
Confidence             99999998654

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=96.97  E-value=0.011  Score=63.61  Aligned_cols=176  Identities=13%  Similarity=0.061  Sum_probs=99.1

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      +.|+.++|++.+++++.+++.+|.++|+.|.++...+.. ..   ....  .+..+..+.++..++  ++..++.+.+..
T Consensus      1753 ~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~~-~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1826 (2582)
T TIGR02813      1753 QSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWVV-SH---SASP--LASAIASVTLGTIDDTSIEAVIKDIEEKT 1826 (2582)
T ss_pred             ccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeeccccc-cc---cccc--cccccccccccccchHHHHHHHHhhhccc
Confidence            347888898889999999999999999998877532210 00   0000  011222233322222  222233333322


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      +  .++.+||-.+.............   ....-...+...|.+.|.+.+.+...+++.++.++...|..  +.......
T Consensus      1827 ~--~~~g~i~l~~~~~~~~~~~~~~~---~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~--g~~~~~~~ 1899 (2582)
T TIGR02813      1827 A--QIDGFIHLQPQHKSVADKVDAIE---LPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGF--GYSNGDAD 1899 (2582)
T ss_pred             c--ccceEEEeccccccccccccccc---cchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCcc--ccCCcccc
Confidence            3  46688887664421000000110   01111123444677888877766555667899999887666  32221111


Q ss_pred             --------hHHHHHHHHHHHHHHHHHccCCceEEEeeee
Q 025260          209 --------AATKAYIDQFSRSLYVEYRKSGIDVQCQVLF  239 (255)
Q Consensus       209 --------~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg  239 (255)
                              ....+++.+|+|++++|+.....+...+.|.
T Consensus      1900 ~~~~~~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1900 SGTQQVKAELNQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred             ccccccccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence                    2357899999999999997655666666664

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK08223 hypothetical protein; Validated

Probab=96.96  E-value=0.0078  Score=50.94  Aligned_cols=67  Identities=15%  Similarity=0.267  Sum_probs=51.9

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh-------------------hhHHHHHHHHHhhcCCceEE
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIK  107 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~  107 (255)
                      .-++++..|+|.|+ ||+|..+++.|++.|. ++.++|.+.                   .+.+.+.+.+++.+|..++.
T Consensus        22 Q~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~  100 (287)
T PRK08223         22 QQRLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIR  100 (287)
T ss_pred             HHHHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEE
Confidence            34577889999987 4999999999999997 788887652                   24556677788888888888


Q ss_pred             EEEEECCC
Q 025260          108 SVVVDFSG  115 (255)
Q Consensus       108 ~~~~d~~~  115 (255)
                      .+...+++
T Consensus       101 ~~~~~l~~  108 (287)
T PRK08223        101 AFPEGIGK  108 (287)
T ss_pred             EEecccCc
Confidence            77776664

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.96  E-value=0.0067  Score=51.34  Aligned_cols=52  Identities=23%  Similarity=0.446  Sum_probs=44.9

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhc
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKY  101 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~  101 (255)
                      .+.+|+.++|.|| ||-+++++..|++.|+ ++.++.|+.++.++..+.+.+.+
T Consensus       122 ~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~  174 (283)
T COG0169         122 VDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELG  174 (283)
T ss_pred             cccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc
Confidence            3446899999986 6899999999999996 79999999999999988887654

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=96.95  E-value=0.021  Score=49.63  Aligned_cols=91  Identities=19%  Similarity=0.178  Sum_probs=59.4

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHH---HHHHhhcCCceEEEEEEECCCCcHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS---DSIQAKYAKTQIKSVVVDFSGDLDEGVERIKE  126 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  126 (255)
                      .++|+++.|.|. |.||+++|+.|...|++|+..+|+++......   .++.+.....++..+.+..+.+....+.  .+
T Consensus       143 ~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~~t~~li~--~~  219 (330)
T PRK12480        143 PVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKESYHLFD--KA  219 (330)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcHHHHHHHh--HH
Confidence            467999999986 67999999999999999999999875433211   1233333356677777766654333332  22


Q ss_pred             HhcCCCccEEEEecCCC
Q 025260          127 AIEGLDVGVLINNVGIS  143 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~  143 (255)
                      .+...+.+.++-|+|..
T Consensus       220 ~l~~mk~gavlIN~aRG  236 (330)
T PRK12480        220 MFDHVKKGAILVNAARG  236 (330)
T ss_pred             HHhcCCCCcEEEEcCCc
Confidence            33333344677777654

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.95  E-value=0.023  Score=50.23  Aligned_cols=75  Identities=19%  Similarity=0.259  Sum_probs=50.5

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .++.++|.|+ |.+|+..++.+.+.|++|++++|+.+++++..+..     ...   +..+..+.     +.+.+.+.+ 
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~-----g~~---v~~~~~~~-----~~l~~~l~~-  230 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF-----GGR---IHTRYSNA-----YEIEDAVKR-  230 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc-----Cce---eEeccCCH-----HHHHHHHcc-
Confidence            4667889987 79999999999999999999999987765543322     111   11222221     234444454 


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                       .|++|++++.
T Consensus       231 -aDvVI~a~~~  240 (370)
T TIGR00518       231 -ADLLIGAVLI  240 (370)
T ss_pred             -CCEEEEcccc
Confidence             4599998865

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PLN02928 oxidoreductase family protein

Probab=96.93  E-value=0.0068  Score=53.03  Aligned_cols=37  Identities=24%  Similarity=0.355  Sum_probs=33.9

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP   87 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~   87 (255)
                      .++||++.|.|- |.||+++|+.+...|++|+..+|+.
T Consensus       156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~  192 (347)
T PLN02928        156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW  192 (347)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence            477999999998 8999999999999999999999874

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.92  E-value=0.0092  Score=44.73  Aligned_cols=80  Identities=21%  Similarity=0.443  Sum_probs=57.1

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCC-------------------hhhHHHHHHHHHhhcCCceEEEEEEE
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN-------------------PDKLKDVSDSIQAKYAKTQIKSVVVD  112 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~d  112 (255)
                      +++|+|.|+ ||+|.++++.|++.|. ++.++|.+                   ..+.+...+.+++.+|..++..+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            567888876 5899999999999998 78888754                   13566777888888888888888777


Q ss_pred             CCCCcHHHHHHHHHHhcCCCccEEEEecC
Q 025260          113 FSGDLDEGVERIKEAIEGLDVGVLINNVG  141 (255)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~id~lv~nag  141 (255)
                      +.+      +...+.+.+  .|++|.+..
T Consensus        81 ~~~------~~~~~~~~~--~d~vi~~~d  101 (135)
T PF00899_consen   81 IDE------ENIEELLKD--YDIVIDCVD  101 (135)
T ss_dssp             CSH------HHHHHHHHT--SSEEEEESS
T ss_pred             ccc------ccccccccC--CCEEEEecC
Confidence            732      223333343  458887653

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.89  E-value=0.007  Score=52.32  Aligned_cols=73  Identities=23%  Similarity=0.430  Sum_probs=50.7

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++|+|+|++ |+|...++.....|++|+..+|++++++.+.+ +     +.+.. +.  .+++  +..+.+.+.    
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-l-----GAd~~-i~--~~~~--~~~~~~~~~----  229 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-L-----GADHV-IN--SSDS--DALEAVKEI----  229 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-h-----CCcEE-EE--cCCc--hhhHHhHhh----
Confidence            49999999999 99988777777799999999999998775543 2     22222 22  1222  333444442    


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                       +|+++++++
T Consensus       230 -~d~ii~tv~  238 (339)
T COG1064         230 -ADAIIDTVG  238 (339)
T ss_pred             -CcEEEECCC
Confidence             568998887

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.88  E-value=0.0095  Score=51.21  Aligned_cols=79  Identities=18%  Similarity=0.259  Sum_probs=53.3

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      +|++++|.|+++++|.+++..+.+.|++|+.++++.++.+...+.+     +.. ..++  ..+  .+..+++.+..+ .
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~-----g~~-~~~~--~~~--~~~~~~v~~~~~-~  213 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL-----GFD-AAIN--YKT--PDLAEALKEAAP-D  213 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc-----CCc-eEEe--cCC--hhHHHHHHHhcc-C
Confidence            4799999999999999999999999999999999887655443322     111 1111  122  123344444433 3


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      ++|++++++|
T Consensus       214 ~~d~vi~~~g  223 (329)
T cd05288         214 GIDVYFDNVG  223 (329)
T ss_pred             CceEEEEcch
Confidence            5779998876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.85  E-value=0.0012  Score=43.67  Aligned_cols=35  Identities=26%  Similarity=0.318  Sum_probs=23.1

Q ss_pred             CC-cEEEEECCCCchHHHHHHHHH-HcCCcEEEEeCC
Q 025260           52 YG-SWALVTGPTDGIGKSFAFQLA-KTGLNLVLVGRN   86 (255)
Q Consensus        52 ~g-k~vlITGas~gIG~~la~~la-~~G~~V~l~~r~   86 (255)
                      .| |.|||+|+|+|.|++-...++ ..|++.+-++..
T Consensus        37 ~GpK~VLViGaStGyGLAsRIa~aFg~gA~TiGV~fE   73 (78)
T PF12242_consen   37 NGPKKVLVIGASTGYGLASRIAAAFGAGADTIGVSFE   73 (78)
T ss_dssp             TS-SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE--
T ss_pred             CCCceEEEEecCCcccHHHHHHHHhcCCCCEEEEeec
Confidence            45 899999999999999444444 677887776654

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.85  E-value=0.0047  Score=53.76  Aligned_cols=90  Identities=13%  Similarity=0.186  Sum_probs=58.2

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHH-----HHHHhhcCCceEEEEEEECCCCcHHHH-HH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS-----DSIQAKYAKTQIKSVVVDFSGDLDEGV-ER  123 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~  123 (255)
                      .+.||++.|.|- |.||+++|+.+...|++|+..+|+........     .++.+.....++..+.+..+++.+..+ ++
T Consensus       147 ~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP~t~~T~~~i~~~  225 (333)
T PRK13243        147 DVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPEAEKELGAEYRPLEELLRESDFVSLHVPLTKETYHMINEE  225 (333)
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChhhHHHcCCEecCHHHHHhhCCEEEEeCCCChHHhhccCHH
Confidence            477999999998 89999999999999999999998754322110     112222235567777777765444444 23


Q ss_pred             HHHHhcCCCccEEEEecCCC
Q 025260          124 IKEAIEGLDVGVLINNVGIS  143 (255)
Q Consensus       124 ~~~~~~~~~id~lv~nag~~  143 (255)
                      ..+.++   .+.++-|.|..
T Consensus       226 ~~~~mk---~ga~lIN~aRg  242 (333)
T PRK13243        226 RLKLMK---PTAILVNTARG  242 (333)
T ss_pred             HHhcCC---CCeEEEECcCc
Confidence            333333   33555556553

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.84  E-value=0.0055  Score=54.83  Aligned_cols=46  Identities=13%  Similarity=0.243  Sum_probs=40.2

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSI   97 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~   97 (255)
                      ++|+.++|.|+ ||+|+.+++.|++.|+ +++++.|+.++.++..+++
T Consensus       179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~  225 (414)
T PRK13940        179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF  225 (414)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh
Confidence            55899999998 9999999999999996 7999999988877766654

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.84  E-value=0.012  Score=48.78  Aligned_cols=82  Identities=18%  Similarity=0.312  Sum_probs=55.7

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh-------------------hhHHHHHHHHHhhcCCceEEEE
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKSV  109 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~  109 (255)
                      ++++.+|+|.|+ ||+|..+++.|++.|. ++.++|.+.                   .+.+.+.+.+++.+|..++..+
T Consensus        21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~   99 (240)
T TIGR02355        21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPI   99 (240)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence            466888988876 5999999999999997 788877653                   2445566777777777777666


Q ss_pred             EEECCCCcHHHHHHHHHHhcCCCccEEEEec
Q 025260          110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNV  140 (255)
Q Consensus       110 ~~d~~~~~~~~~~~~~~~~~~~~id~lv~na  140 (255)
                      ...+++      +.+.+.+.+  .|++|.+.
T Consensus       100 ~~~i~~------~~~~~~~~~--~DlVvd~~  122 (240)
T TIGR02355       100 NAKLDD------AELAALIAE--HDIVVDCT  122 (240)
T ss_pred             eccCCH------HHHHHHhhc--CCEEEEcC
Confidence            554432      123333443  34777655

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.83  E-value=0.003  Score=57.67  Aligned_cols=46  Identities=20%  Similarity=0.357  Sum_probs=39.9

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDS   96 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~   96 (255)
                      +++++.++|+|+ ||+|++++..|++.|++|.+.+|+.++.++..++
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~  374 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR  374 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            456899999996 7999999999999999999999998877766544

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.83  E-value=0.0033  Score=49.12  Aligned_cols=43  Identities=21%  Similarity=0.310  Sum_probs=37.5

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD   92 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~   92 (255)
                      +++||.++|.|++.-+|..+++.|.++|++|.++.|+.+.+.+
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~   83 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKE   83 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHH
Confidence            4679999999997778999999999999999999998755544

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.82  E-value=0.011  Score=52.06  Aligned_cols=65  Identities=17%  Similarity=0.315  Sum_probs=49.8

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCC-------------------hhhHHHHHHHHHhhcCCceEEE
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN-------------------PDKLKDVSDSIQAKYAKTQIKS  108 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~  108 (255)
                      .++++.+|+|.|+ ||+|.++++.|++.|. ++.++|.+                   ..+.+.+.+.+++.++..++..
T Consensus        37 ~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~  115 (370)
T PRK05600         37 ERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNA  115 (370)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEE
Confidence            3466888999987 5999999999999997 89998876                   2355666777877777776666


Q ss_pred             EEEECC
Q 025260          109 VVVDFS  114 (255)
Q Consensus       109 ~~~d~~  114 (255)
                      +...++
T Consensus       116 ~~~~i~  121 (370)
T PRK05600        116 LRERLT  121 (370)
T ss_pred             eeeecC
Confidence            665544

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.82  E-value=0.0078  Score=52.63  Aligned_cols=81  Identities=27%  Similarity=0.375  Sum_probs=53.6

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .+|+++||.||+||+|.+.++-....|+..++++++.++.+ ..+++.    ..  ..  +|-.+  .+..+++++.. .
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-l~k~lG----Ad--~v--vdy~~--~~~~e~~kk~~-~  223 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-LVKKLG----AD--EV--VDYKD--ENVVELIKKYT-G  223 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-HHHHcC----Cc--Ee--ecCCC--HHHHHHHHhhc-C
Confidence            45899999999999999999888889965555555555433 223221    11  22  23333  35566666654 4


Q ss_pred             CCccEEEEecCCC
Q 025260          131 LDVGVLINNVGIS  143 (255)
Q Consensus       131 ~~id~lv~nag~~  143 (255)
                      ..+|+++-|.|..
T Consensus       224 ~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  224 KGVDVVLDCVGGS  236 (347)
T ss_pred             CCccEEEECCCCC
Confidence            4677999999974

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.79  E-value=0.013  Score=49.85  Aligned_cols=46  Identities=22%  Similarity=0.246  Sum_probs=39.5

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~   93 (255)
                      .++++||.+.|.|.|+-+|+.+|..|.++|++|.++.+.....++.
T Consensus       154 ~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~  199 (301)
T PRK14194        154 CGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKAL  199 (301)
T ss_pred             CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHH
Confidence            4567799999999999999999999999999999997766544443

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=96.79  E-value=0.012  Score=50.35  Aligned_cols=80  Identities=20%  Similarity=0.333  Sum_probs=55.9

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|.+++|.|+++++|.+++......|++|+.+.++.++.+...+    .  +.+ .++  +..+  ....+.+.+..++.
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~----~--g~~-~~~--~~~~--~~~~~~i~~~~~~~  207 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA----L--GIG-PVV--STEQ--PGWQDKVREAAGGA  207 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh----c--CCC-EEE--cCCC--chHHHHHHHHhCCC
Confidence            47899999999999999999999999999999888776554432    1  111 111  1121  23445566666655


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      ++|+++.+.|.
T Consensus       208 ~~d~v~d~~g~  218 (324)
T cd08292         208 PISVALDSVGG  218 (324)
T ss_pred             CCcEEEECCCC
Confidence            68899988773

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.77  E-value=0.0029  Score=52.83  Aligned_cols=76  Identities=13%  Similarity=0.149  Sum_probs=48.9

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      +.++|+||++- |+.++++|.++|++|+.+.+++...+...+        .....+..+..+.     +.+.+.+.+.++
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~--------~g~~~v~~g~l~~-----~~l~~~l~~~~i   66 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI--------HQALTVHTGALDP-----QELREFLKRHSI   66 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc--------cCCceEEECCCCH-----HHHHHHHHhcCC
Confidence            36899999998 999999999999999999998765433221        0011233333332     224444444456


Q ss_pred             cEEEEecCCC
Q 025260          134 GVLINNVGIS  143 (255)
Q Consensus       134 d~lv~nag~~  143 (255)
                      |++|+.+...
T Consensus        67 ~~VIDAtHPf   76 (256)
T TIGR00715        67 DILVDATHPF   76 (256)
T ss_pred             CEEEEcCCHH
Confidence            6777776643

This enzyme was found to be a monomer by gel filtration.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.75  E-value=0.022  Score=49.00  Aligned_cols=118  Identities=19%  Similarity=0.272  Sum_probs=67.1

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCC--cEEEEeCCh--hhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNP--DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .+.|+|++|.+|..++..++..|.  +|++++|++  ++++....++.+........ ..+..+++        .+.+. 
T Consensus         2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~-~~i~~~~d--------~~~l~-   71 (309)
T cd05294           2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGID-AEIKISSD--------LSDVA-   71 (309)
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCC-cEEEECCC--------HHHhC-
Confidence            588999999999999999999986  499999965  55554444443211000000 12222221        12345 


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECCcc
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGA  195 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS~~  195 (255)
                       +-|++|.++|....     .+.+..   +.++.|..-.    +.+.+.+.+. .++.++++++..
T Consensus        72 -~aDiViitag~p~~-----~~~~r~---dl~~~n~~i~----~~~~~~i~~~~~~~~viv~~npv  124 (309)
T cd05294          72 -GSDIVIITAGVPRK-----EGMSRL---DLAKKNAKIV----KKYAKQIAEFAPDTKILVVTNPV  124 (309)
T ss_pred             -CCCEEEEecCCCCC-----CCCCHH---HHHHHHHHHH----HHHHHHHHHHCCCeEEEEeCCch
Confidence             34599999997432     123322   2334444333    4444434333 467888888643

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.74  E-value=0.027  Score=43.48  Aligned_cols=46  Identities=24%  Similarity=0.315  Sum_probs=34.1

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS   94 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~   94 (255)
                      ++.+.||+++|.| -|.+|+.+|+.|...|++|++++.++-..-++.
T Consensus        18 ~~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~   63 (162)
T PF00670_consen   18 NLMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAA   63 (162)
T ss_dssp             -S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH
T ss_pred             ceeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhh
Confidence            5567799999997 578999999999999999999999986655444

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PLN02740 Alcohol dehydrogenase-like

Probab=96.72  E-value=0.015  Score=51.50  Aligned_cols=80  Identities=21%  Similarity=0.224  Sum_probs=53.1

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++|+|.|+ |++|...+..+...|+ +|+.+++++++++.+. ++     +... .+  |..+..+...+.+.+..++
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~-~~-----Ga~~-~i--~~~~~~~~~~~~v~~~~~~  267 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK-EM-----GITD-FI--NPKDSDKPVHERIREMTGG  267 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH-Hc-----CCcE-EE--ecccccchHHHHHHHHhCC
Confidence            4899999986 8999999998888999 6999999887766542 22     2211 22  2222111233445544444


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                       .+|+++.++|.
T Consensus       268 -g~dvvid~~G~  278 (381)
T PLN02740        268 -GVDYSFECAGN  278 (381)
T ss_pred             -CCCEEEECCCC
Confidence             67899998884

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.72  E-value=0.013  Score=50.45  Aligned_cols=59  Identities=19%  Similarity=0.327  Sum_probs=45.1

Q ss_pred             EEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh-------------------hhHHHHHHHHHhhcCCceEEEEEEECCC
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKSVVVDFSG  115 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~-~V~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~d~~~  115 (255)
                      |+|.|+ ||+|.++++.|+..|. ++.++|.+.                   .+.+.+.+.+++.++..++..+..++.+
T Consensus         2 VlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~~   80 (312)
T cd01489           2 VLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIKD   80 (312)
T ss_pred             EEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCCC
Confidence            678886 8999999999999997 788887542                   3455566777777777777777766664

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=96.70  E-value=0.017  Score=50.91  Aligned_cols=80  Identities=21%  Similarity=0.189  Sum_probs=52.2

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++++|+|+ ++||...+..+...|+ +|+.+++++++++.+ +++     +... .+  |..+..+...+.+.+..++
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~-----Ga~~-~i--~~~~~~~~~~~~v~~~~~~  254 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL-----GATD-CV--NPNDYDKPIQEVIVEITDG  254 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh-----CCCe-EE--cccccchhHHHHHHHHhCC
Confidence            4899999985 8999999888888898 799999988876654 222     2211 11  2222111233445444444


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                       .+|+++.++|.
T Consensus       255 -g~d~vid~~G~  265 (368)
T TIGR02818       255 -GVDYSFECIGN  265 (368)
T ss_pred             -CCCEEEECCCC
Confidence             67799998874

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.69  E-value=0.034  Score=46.65  Aligned_cols=115  Identities=23%  Similarity=0.340  Sum_probs=70.6

Q ss_pred             EEEECCCCchHHHHHHHHHHcC----CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTG----LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G----~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      +.|.||+|.+|..++..|+..|    .+|++.|+++++++....+++......  ....+..+++       ..+.+.+ 
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~--~~~~i~~~~d-------~~~~~~~-   70 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL--ADIKVSITDD-------PYEAFKD-   70 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc--cCcEEEECCc-------hHHHhCC-
Confidence            4689998899999999999999    789999999988888777776542111  1122222322       3445554 


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECC
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGS  193 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS  193 (255)
                       -|++|..+|.....     ..+..   ..+..    ..-+.+...+.+.+. +++.++++|.
T Consensus        71 -aDiVv~t~~~~~~~-----g~~r~---~~~~~----n~~i~~~i~~~i~~~~p~a~~i~~tN  120 (263)
T cd00650          71 -ADVVIITAGVGRKP-----GMGRL---DLLKR----NVPIVKEIGDNIEKYSPDAWIIVVSN  120 (263)
T ss_pred             -CCEEEECCCCCCCc-----CCCHH---HHHHH----HHHHHHHHHHHHHHHCCCeEEEEecC
Confidence             55999999875321     12221   12222    333445555545433 4677777764

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.68  E-value=0.013  Score=53.13  Aligned_cols=78  Identities=18%  Similarity=0.229  Sum_probs=55.4

Q ss_pred             ccCCcEEEEECC----------------CCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEEC
Q 025260           50 RKYGSWALVTGP----------------TDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF  113 (255)
Q Consensus        50 ~~~gk~vlITGa----------------s~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~  113 (255)
                      +++||.||||+|                ||-.|.++|++++.+|++|.+++-... +.          +...+..+.++-
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~~----------~p~~v~~i~V~t  321 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-LA----------DPQGVKVIHVES  321 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-CC----------CCCCceEEEecC
Confidence            467999999996                678999999999999999999885432 10          123345555543


Q ss_pred             CCCcHHHHHHHHHHhcCCCccEEEEecCCCC
Q 025260          114 SGDLDEGVERIKEAIEGLDVGVLINNVGISY  144 (255)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~id~lv~nag~~~  144 (255)
                         .++..+.+.+.++   .|++|.+|++..
T Consensus       322 ---a~eM~~av~~~~~---~Di~I~aAAVaD  346 (475)
T PRK13982        322 ---ARQMLAAVEAALP---ADIAIFAAAVAD  346 (475)
T ss_pred             ---HHHHHHHHHhhCC---CCEEEEeccccc
Confidence               3455566655554   469999999864

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.67  E-value=0.018  Score=49.85  Aligned_cols=77  Identities=22%  Similarity=0.334  Sum_probs=52.1

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCc-EEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~-V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      |++++|+|+ |++|...+..+...|++ |+++++++++.+.+ +++     +.+ .  .+|..+.  + .+++.+..++.
T Consensus       164 g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~-----ga~-~--~i~~~~~--~-~~~~~~~~~~~  230 (339)
T cd08239         164 RDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL-----GAD-F--VINSGQD--D-VQEIRELTSGA  230 (339)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-----CCC-E--EEcCCcc--h-HHHHHHHhCCC
Confidence            899999986 89999999988899998 99999988776543 332     221 1  1222222  2 44555544444


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      .+|+++.+.|.
T Consensus       231 ~~d~vid~~g~  241 (339)
T cd08239         231 GADVAIECSGN  241 (339)
T ss_pred             CCCEEEECCCC
Confidence            57799988874

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.65  E-value=0.046  Score=50.14  Aligned_cols=43  Identities=16%  Similarity=0.086  Sum_probs=36.8

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS   94 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~   94 (255)
                      ..+.+|+|+|+ |.+|...+..+...|++|++.|+++++++...
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae  205 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE  205 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            34899999987 58999999999999999999999988776544

>PRK06487 glycerate dehydrogenase; Provisional

Probab=96.64  E-value=0.0032  Score=54.44  Aligned_cols=90  Identities=10%  Similarity=0.070  Sum_probs=58.2

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHH-HHHHHHh
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGV-ERIKEAI  128 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~~~  128 (255)
                      .+.||++.|.|- |.||+++|+.+...|++|+..+|..........++.+.....++..+.+.++++-+..+ ++..+.+
T Consensus       145 ~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~~~~~~~~~~~l~ell~~sDiv~l~lPlt~~T~~li~~~~~~~m  223 (317)
T PRK06487        145 ELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLPGRPARPDRLPLDELLPQVDALTLHCPLTEHTRHLIGARELALM  223 (317)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCCcccccccCHHHHHHhCCEEEECCCCChHHhcCcCHHHHhcC
Confidence            477999999997 79999999999999999999987632111001122333335678888888876433333 3333333


Q ss_pred             cCCCccEEEEecCCC
Q 025260          129 EGLDVGVLINNVGIS  143 (255)
Q Consensus       129 ~~~~id~lv~nag~~  143 (255)
                      +   .+.++-|.|..
T Consensus       224 k---~ga~lIN~aRG  235 (317)
T PRK06487        224 K---PGALLINTARG  235 (317)
T ss_pred             C---CCeEEEECCCc
Confidence            3   33566666654

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.62  E-value=0.022  Score=45.67  Aligned_cols=65  Identities=18%  Similarity=0.325  Sum_probs=48.5

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh-------------------hhHHHHHHHHHhhcCCceEEE
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKS  108 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~  108 (255)
                      -.+++++|+|.|+ +|+|.++++.|+..|. ++.++|.+.                   .+.+.+.+.+++.+|..++..
T Consensus        17 ~~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~   95 (197)
T cd01492          17 KRLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSV   95 (197)
T ss_pred             HHHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEE
Confidence            3466888999975 5699999999999998 688887541                   245556677888888877776


Q ss_pred             EEEECC
Q 025260          109 VVVDFS  114 (255)
Q Consensus       109 ~~~d~~  114 (255)
                      ....++
T Consensus        96 ~~~~~~  101 (197)
T cd01492          96 DTDDIS  101 (197)
T ss_pred             EecCcc
Confidence            665444

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.60  E-value=0.0082  Score=50.95  Aligned_cols=41  Identities=22%  Similarity=0.362  Sum_probs=36.0

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD   88 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~   88 (255)
                      ...++||.|+|.|+++-.|+.++..|.++|++|.++.|...
T Consensus       154 ~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~  194 (283)
T PRK14192        154 NIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ  194 (283)
T ss_pred             CCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch
Confidence            45677999999999998999999999999999999887443

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.60  E-value=0.032  Score=50.01  Aligned_cols=44  Identities=23%  Similarity=0.290  Sum_probs=37.7

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD   92 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~   92 (255)
                      +..+.|++|+|.|. |.||+.+|+.+...|++|+++++++.+..+
T Consensus       207 ~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~  250 (425)
T PRK05476        207 NVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQ  250 (425)
T ss_pred             cCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHH
Confidence            34467999999997 689999999999999999999998866543

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=96.60  E-value=0.017  Score=48.83  Aligned_cols=80  Identities=20%  Similarity=0.294  Sum_probs=54.5

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      +|++++|.|+++++|.+++......|++|+.+++++++.+.. .++     +.+. .+  +..+  ....+.+.+..++.
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~~-~~--~~~~--~~~~~~~~~~~~~~  204 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA-RAA-----GADH-VI--NYRD--EDFVERVREITGGR  204 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHC-----CCCE-EE--eCCc--hhHHHHHHHHcCCC
Confidence            479999999999999999999989999999999887765543 221     2211 11  1111  23445555555444


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      .+|.++++.|.
T Consensus       205 ~~d~vl~~~~~  215 (320)
T cd05286         205 GVDVVYDGVGK  215 (320)
T ss_pred             CeeEEEECCCc
Confidence            68899988763

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=96.59  E-value=0.018  Score=49.24  Aligned_cols=80  Identities=19%  Similarity=0.381  Sum_probs=55.2

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|.+++|.|+++++|.++++.+..+|++|+.+.+++++.+.. +++   +  .+ ..  .+..+  ....+++.+..++.
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g--~~-~~--~~~~~--~~~~~~~~~~~~~~  206 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KAL---G--AD-EV--IDSSP--EDLAQRVKEATGGA  206 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-Hhc---C--CC-EE--ecccc--hhHHHHHHHHhcCC
Confidence            478999999999999999999999999999999888765544 222   1  11 11  11111  23445566555555


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      ++|+++++.|.
T Consensus       207 ~~d~vl~~~g~  217 (323)
T cd05282         207 GARLALDAVGG  217 (323)
T ss_pred             CceEEEECCCC
Confidence            68899988873

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=96.57  E-value=0.022  Score=48.37  Aligned_cols=80  Identities=23%  Similarity=0.297  Sum_probs=54.2

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      +|++++|+|+++++|.+++..+...|++|+.++++.++.+... +   .+  .. ..+  +..+  .+..+.+.+..++.
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~---~g--~~-~~~--~~~~--~~~~~~i~~~~~~~  207 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR-A---LG--AD-HVI--DYRD--PDLRERVKALTGGR  207 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH-H---cC--Cc-eee--ecCC--ccHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999876655432 1   11  11 111  1111  13334555544444


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      .+|.++++.|.
T Consensus       208 ~~d~v~~~~g~  218 (323)
T cd08241         208 GVDVVYDPVGG  218 (323)
T ss_pred             CcEEEEECccH
Confidence            68899998774

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.56  E-value=0.0062  Score=51.84  Aligned_cols=43  Identities=21%  Similarity=0.261  Sum_probs=37.6

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD   92 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~   92 (255)
                      .+++|++++|.|. |++|+++|+.|...|++|.+.+|++++.+.
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~  189 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR  189 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            3567999999999 679999999999999999999999876543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK06436 glycerate dehydrogenase; Provisional

Probab=96.56  E-value=0.012  Score=50.59  Aligned_cols=91  Identities=15%  Similarity=0.196  Sum_probs=57.7

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhh--HHHHHHHHHhhcCCceEEEEEEECCCCcHHHH-HHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK--LKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGV-ERIK  125 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~  125 (255)
                      ..++||++.|.|- |.||+++|+.+...|++|+..+|+...  ......++.+.....++....+..+++.+..+ ++..
T Consensus       118 ~~L~gktvgIiG~-G~IG~~vA~~l~afG~~V~~~~r~~~~~~~~~~~~~l~ell~~aDiv~~~lp~t~~T~~li~~~~l  196 (303)
T PRK06436        118 KLLYNKSLGILGY-GGIGRRVALLAKAFGMNIYAYTRSYVNDGISSIYMEPEDIMKKSDFVLISLPLTDETRGMINSKML  196 (303)
T ss_pred             CCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcccCcccccCCHHHHHhhCCEEEECCCCCchhhcCcCHHHH
Confidence            3578999999987 789999999888889999999986422  11101122332235677777777776544443 2233


Q ss_pred             HHhcCCCccEEEEecCCC
Q 025260          126 EAIEGLDVGVLINNVGIS  143 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~  143 (255)
                      +.++   .+.++-|.|..
T Consensus       197 ~~mk---~ga~lIN~sRG  211 (303)
T PRK06436        197 SLFR---KGLAIINVARA  211 (303)
T ss_pred             hcCC---CCeEEEECCCc
Confidence            3333   33566666654

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=96.56  E-value=0.0059  Score=52.60  Aligned_cols=104  Identities=16%  Similarity=0.144  Sum_probs=65.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH--HHHHHhhcCCceEEEEEEECCCCcHHHH-HHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV--SDSIQAKYAKTQIKSVVVDFSGDLDEGV-ERIKE  126 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~  126 (255)
                      .+.||++.|.|- |.||+++|+.+...|++|+..+|.....+..  ..++.+.....++..+.+.++++-+..+ ++..+
T Consensus       142 ~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell~~sDvv~lh~Plt~~T~~li~~~~~~  220 (311)
T PRK08410        142 EIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELLKTSDIISIHAPLNEKTKNLIAYKELK  220 (311)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHhhcCCEEEEeCCCCchhhcccCHHHHH
Confidence            478999999997 7899999999999999999999864221110  1122333335678888888886544444 33344


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHH
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKV  164 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~  164 (255)
                      .++.   +.++-|.|...       -++.+.+.+.++-
T Consensus       221 ~Mk~---~a~lIN~aRG~-------vVDe~AL~~AL~~  248 (311)
T PRK08410        221 LLKD---GAILINVGRGG-------IVNEKDLAKALDE  248 (311)
T ss_pred             hCCC---CeEEEECCCcc-------ccCHHHHHHHHHc
Confidence            4443   35655666542       2345555555443

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.56  E-value=0.02  Score=47.18  Aligned_cols=59  Identities=15%  Similarity=0.298  Sum_probs=43.6

Q ss_pred             EEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh-------------------hhHHHHHHHHHhhcCCceEEEEEEECCC
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKSVVVDFSG  115 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~-~V~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~d~~~  115 (255)
                      |+|.| .||+|.++++.|+..|. ++.++|.+.                   .+.+.+.+.+++.+|..++..+..++.+
T Consensus         2 VlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~~   80 (234)
T cd01484           2 VLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVGP   80 (234)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCCh
Confidence            56666 67999999999999997 788877652                   2444556667777777777777766643

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.55  E-value=0.0074  Score=45.61  Aligned_cols=46  Identities=20%  Similarity=0.270  Sum_probs=39.7

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~   93 (255)
                      .++++||.++|.|.|.-+|+.++..|.++|++|.++.++...+++.
T Consensus        23 ~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~~   68 (140)
T cd05212          23 GVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQSK   68 (140)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHHH
Confidence            4567899999999999999999999999999999998765555543

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=96.51  E-value=0.029  Score=48.19  Aligned_cols=80  Identities=15%  Similarity=0.246  Sum_probs=54.6

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|.+++|.|+++++|.+++..+...|++++++.+++++.+.+. ++     +.. ..  .+..+ .+...+.+.+..++.
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~-----g~~-~~--~~~~~-~~~~~~~~~~~~~~~  209 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCK-KL-----AAI-IL--IRYPD-EEGFAPKVKKLTGEK  209 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc-----CCc-EE--EecCC-hhHHHHHHHHHhCCC
Confidence            4789999999999999999999999999888888877655442 21     221 11  12111 112455566655555


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      ++|+++++.|
T Consensus       210 ~~d~~i~~~~  219 (334)
T PTZ00354        210 GVNLVLDCVG  219 (334)
T ss_pred             CceEEEECCc
Confidence            6889998876

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.50  E-value=0.034  Score=44.68  Aligned_cols=64  Identities=16%  Similarity=0.234  Sum_probs=46.5

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh---------------------hhHHHHHHHHHhhcCCceEE
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP---------------------DKLKDVSDSIQAKYAKTQIK  107 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~---------------------~~~~~~~~~~~~~~~~~~~~  107 (255)
                      ++++.+|+|.|+++ +|.++++.|+..|. ++.++|.+.                     .+.+.+.+.+++.+|..++.
T Consensus        16 ~L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~   94 (198)
T cd01485          16 KLRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLS   94 (198)
T ss_pred             HHhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEE
Confidence            45678899997765 99999999999998 688887552                     13334556677777777777


Q ss_pred             EEEEECC
Q 025260          108 SVVVDFS  114 (255)
Q Consensus       108 ~~~~d~~  114 (255)
                      .+.-+..
T Consensus        95 ~~~~~~~  101 (198)
T cd01485          95 IVEEDSL  101 (198)
T ss_pred             EEecccc
Confidence            6665554

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.50  E-value=0.04  Score=47.49  Aligned_cols=106  Identities=14%  Similarity=0.118  Sum_probs=66.8

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHH---HH--HHHHHhhcCCceEEEEEEECCCCcHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK---DV--SDSIQAKYAKTQIKSVVVDFSGDLDEGVERI  124 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~---~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  124 (255)
                      .++||++.|.|- |.||+++|+.|...|++|+..+|+.+...   +.  ..++.+.-...++..+.+..+++.+..+.  
T Consensus       133 ~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l~~aDvvv~~lPlt~~T~~li~--  209 (312)
T PRK15469        133 HREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFLSQTRVLINLLPNTPETVGIIN--  209 (312)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHHhcCCEEEECCCCCHHHHHHhH--
Confidence            467999999875 67999999999999999999998654321   10  12233333356777777777765555543  


Q ss_pred             HHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHh
Q 025260          125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVN  165 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N  165 (255)
                      .+.+...+.+.++-|.|...       -.+.+++.+.++-+
T Consensus       210 ~~~l~~mk~ga~lIN~aRG~-------vVde~aL~~aL~~g  243 (312)
T PRK15469        210 QQLLEQLPDGAYLLNLARGV-------HVVEDDLLAALDSG  243 (312)
T ss_pred             HHHHhcCCCCcEEEECCCcc-------ccCHHHHHHHHhcC
Confidence            23344444446777777642       23455555555444

>PRK07411 hypothetical protein; Validated

Probab=96.49  E-value=0.022  Score=50.67  Aligned_cols=65  Identities=20%  Similarity=0.276  Sum_probs=50.1

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh-------------------hhHHHHHHHHHhhcCCceEEE
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKS  108 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~  108 (255)
                      .+++..+|+|.|++ |+|.++++.|++.|. ++.++|.+.                   .+.+.+.+.+++.++..++..
T Consensus        34 ~~L~~~~VlivG~G-GlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~  112 (390)
T PRK07411         34 KRLKAASVLCIGTG-GLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDL  112 (390)
T ss_pred             HHHhcCcEEEECCC-HHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEE
Confidence            34668899999875 999999999999997 788877542                   245567778888888877777


Q ss_pred             EEEECC
Q 025260          109 VVVDFS  114 (255)
Q Consensus       109 ~~~d~~  114 (255)
                      +...++
T Consensus       113 ~~~~~~  118 (390)
T PRK07411        113 YETRLS  118 (390)
T ss_pred             EecccC
Confidence            665554

>PRK08328 hypothetical protein; Provisional

Probab=96.48  E-value=0.03  Score=46.12  Aligned_cols=38  Identities=24%  Similarity=0.430  Sum_probs=31.6

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP   87 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~   87 (255)
                      -++++++|+|.|++ |+|.++++.|++.|. ++.++|.+.
T Consensus        23 ~~L~~~~VlIiG~G-GlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         23 EKLKKAKVAVVGVG-GLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             HHHhCCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            34668889999875 999999999999997 788888653

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=96.47  E-value=0.024  Score=49.60  Aligned_cols=79  Identities=27%  Similarity=0.375  Sum_probs=52.5

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCc-EEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~-V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++++|.|+ +++|...+..+...|++ |+.+++++++.+.+. ++     +.+ ..  .|..++  +..+.+.+..++
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~-~~-----Ga~-~~--i~~~~~--~~~~~i~~~~~~  243 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAR-EF-----GAT-HT--VNSSGT--DPVEAIRALTGG  243 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc-----CCc-eE--EcCCCc--CHHHHHHHHhCC
Confidence            4899999985 99999998888888995 988989887765542 22     221 11  222222  334555555554


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                      ..+|+++.+.|.
T Consensus       244 ~g~d~vid~~g~  255 (358)
T TIGR03451       244 FGADVVIDAVGR  255 (358)
T ss_pred             CCCCEEEECCCC
Confidence            457899988873

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.45  E-value=0.012  Score=45.56  Aligned_cols=94  Identities=21%  Similarity=0.361  Sum_probs=53.1

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      ..+++||.++|.|.|.-+|+.++..|.++|+.|.++....+.+++..+       .+++.+...-..+       .+...
T Consensus        31 ~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~~-------~ADIVVsa~G~~~-------~i~~~   96 (160)
T PF02882_consen   31 GIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEITR-------RADIVVSAVGKPN-------LIKAD   96 (160)
T ss_dssp             T-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHHT-------TSSEEEE-SSSTT--------B-GG
T ss_pred             CCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccceee-------eccEEeeeecccc-------ccccc
Confidence            446779999999999999999999999999999998776555544332       3455554443332       23332


Q ss_pred             hcCCCccEEEEecCCCCC--cccccccCCHHH
Q 025260          128 IEGLDVGVLINNVGISYP--YARFFHEVDQVL  157 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~--~~~~~~~~~~~~  157 (255)
                        .++.+.+|-+.|+...  ..+...|.+.++
T Consensus        97 --~ik~gavVIDvG~~~~~~~~~~~GDv~~~~  126 (160)
T PF02882_consen   97 --WIKPGAVVIDVGINYVPGDGKLVGDVDFES  126 (160)
T ss_dssp             --GS-TTEEEEE--CEEETTTTEEEESB-HHH
T ss_pred             --cccCCcEEEecCCccccccceeeecccHHH
Confidence              2233477777887543  223344555443

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=96.45  E-value=0.028  Score=49.47  Aligned_cols=80  Identities=19%  Similarity=0.199  Sum_probs=52.7

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++|+|.|+ +++|...+..+...|+ +|+.+++++++++.+ +++     +.+. .+  |..+..++..+.+.+..++
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l-----Ga~~-~i--~~~~~~~~~~~~v~~~~~~  255 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF-----GATD-CV--NPKDHDKPIQQVLVEMTDG  255 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc-----CCCE-EE--cccccchHHHHHHHHHhCC
Confidence            4899999975 8999999998889999 699999998876644 222     2221 12  2222111344445544444


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                       .+|+++.+.|.
T Consensus       256 -g~d~vid~~g~  266 (368)
T cd08300         256 -GVDYTFECIGN  266 (368)
T ss_pred             -CCcEEEECCCC
Confidence             67899998873

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PRK07574 formate dehydrogenase; Provisional

Probab=96.44  E-value=0.011  Score=52.25  Aligned_cols=90  Identities=11%  Similarity=0.083  Sum_probs=58.4

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH-------HHHHHhhcCCceEEEEEEECCCCcHHHH-
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV-------SDSIQAKYAKTQIKSVVVDFSGDLDEGV-  121 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~-------~~~~~~~~~~~~~~~~~~d~~~~~~~~~-  121 (255)
                      .+.||++.|.|. |.||+++|+.|...|++|+..+|+....+..       ...+.+.....++..+.+.++.+.+..+ 
T Consensus       189 ~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~  267 (385)
T PRK07574        189 DLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYHVSFDSLVSVCDVVTIHCPLHPETEHLFD  267 (385)
T ss_pred             ecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceecCCHHHHhhcCCEEEEcCCCCHHHHHHhC
Confidence            477999999998 6699999999999999999999875221110       1123333345677888887776555554 


Q ss_pred             HHHHHHhcCCCccEEEEecCCC
Q 025260          122 ERIKEAIEGLDVGVLINNVGIS  143 (255)
Q Consensus       122 ~~~~~~~~~~~id~lv~nag~~  143 (255)
                      ++..+.++.   +.++-|.|..
T Consensus       268 ~~~l~~mk~---ga~lIN~aRG  286 (385)
T PRK07574        268 ADVLSRMKR---GSYLVNTARG  286 (385)
T ss_pred             HHHHhcCCC---CcEEEECCCC
Confidence            333444443   3455555543

>PLN03139 formate dehydrogenase; Provisional

Probab=96.44  E-value=0.014  Score=51.79  Aligned_cols=91  Identities=20%  Similarity=0.175  Sum_probs=57.6

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH-------HHHHHhhcCCceEEEEEEECCCCcHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV-------SDSIQAKYAKTQIKSVVVDFSGDLDEGVE  122 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~-------~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  122 (255)
                      ++.||++.|.|. |.||+++|+.|...|++|+..+|+....+..       .+++.+..+..++..+.+..+++.+..+.
T Consensus       196 ~L~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~sDvV~l~lPlt~~T~~li~  274 (386)
T PLN03139        196 DLEGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFEEDLDAMLPKCDVVVINTPLTEKTRGMFN  274 (386)
T ss_pred             CCCCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceecCCHHHHHhhCCEEEEeCCCCHHHHHHhC
Confidence            577999999994 7799999999999999999999874221110       11233333356777777776655445442


Q ss_pred             HHHHHhcCCCccEEEEecCCC
Q 025260          123 RIKEAIEGLDVGVLINNVGIS  143 (255)
Q Consensus       123 ~~~~~~~~~~id~lv~nag~~  143 (255)
                        .+.+...+.+.++-|.|..
T Consensus       275 --~~~l~~mk~ga~lIN~aRG  293 (386)
T PLN03139        275 --KERIAKMKKGVLIVNNARG  293 (386)
T ss_pred             --HHHHhhCCCCeEEEECCCC
Confidence              1233333333555566553

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=96.42  E-value=0.029  Score=48.21  Aligned_cols=78  Identities=19%  Similarity=0.259  Sum_probs=51.2

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      +|++++|.|+++++|.+++......|++|+.+++++++.+.. +++   +  .+ ..+  +..+.  +..+.+.+..+ .
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g--~~-~v~--~~~~~--~~~~~~~~~~~-~  206 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSL---G--CD-RPI--NYKTE--DLGEVLKKEYP-K  206 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHc---C--Cc-eEE--eCCCc--cHHHHHHHhcC-C
Confidence            478999999999999999888888999999999887765544 222   1  11 112  22221  22233333333 3


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      .+|+++++.|
T Consensus       207 ~vd~v~~~~g  216 (329)
T cd08250         207 GVDVVYESVG  216 (329)
T ss_pred             CCeEEEECCc
Confidence            5789998776

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=96.42  E-value=0.029  Score=49.78  Aligned_cols=42  Identities=24%  Similarity=0.247  Sum_probs=36.6

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~   93 (255)
                      +|.+++|+|+++++|.+++..+...|++++++++++++.+.+
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~  234 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC  234 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            478999999999999999988888999999998887776544

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=96.41  E-value=0.027  Score=48.48  Aligned_cols=78  Identities=15%  Similarity=0.278  Sum_probs=51.7

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      +++++++||++++|...+......|++|+.+++++++.+.+.+    .  +.+ ..+  |..+  .+..+++.+..++..
T Consensus       144 ~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~----~--g~~-~~i--~~~~--~~~~~~v~~~~~~~~  212 (324)
T cd08291         144 AKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK----I--GAE-YVL--NSSD--PDFLEDLKELIAKLN  212 (324)
T ss_pred             CcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----c--CCc-EEE--ECCC--ccHHHHHHHHhCCCC
Confidence            4566667999999999988777889999999998876655432    2  221 122  2222  234455665555446


Q ss_pred             ccEEEEecC
Q 025260          133 VGVLINNVG  141 (255)
Q Consensus       133 id~lv~nag  141 (255)
                      +|+++++.|
T Consensus       213 ~d~vid~~g  221 (324)
T cd08291         213 ATIFFDAVG  221 (324)
T ss_pred             CcEEEECCC
Confidence            789998877

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.41  E-value=0.023  Score=49.54  Aligned_cols=41  Identities=24%  Similarity=0.458  Sum_probs=36.2

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~   93 (255)
                      .|++|+|.|+ |++|...+..+...|++|+++++++++++.+
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            4899999999 9999999988889999999999998876644

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.40  E-value=0.024  Score=46.54  Aligned_cols=75  Identities=20%  Similarity=0.368  Sum_probs=53.5

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG  134 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id  134 (255)
                      .++|.|+ |-+|..+|+.|.+.|++|++++++++..++..++      ......+..|-++.      .+.+..+-.+.|
T Consensus         2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~------~~~~~~v~gd~t~~------~~L~~agi~~aD   68 (225)
T COG0569           2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD------ELDTHVVIGDATDE------DVLEEAGIDDAD   68 (225)
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh------hcceEEEEecCCCH------HHHHhcCCCcCC
Confidence            4556655 5799999999999999999999999987774432      23466777777764      444444444566


Q ss_pred             EEEEecCC
Q 025260          135 VLINNVGI  142 (255)
Q Consensus       135 ~lv~nag~  142 (255)
                      ++|...|-
T Consensus        69 ~vva~t~~   76 (225)
T COG0569          69 AVVAATGN   76 (225)
T ss_pred             EEEEeeCC
Confidence            77766654

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.39  E-value=0.028  Score=47.53  Aligned_cols=94  Identities=18%  Similarity=0.294  Sum_probs=58.5

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      .++++||.|+|.|.|.-+|+.++.-|.++|++|.++.+....+++..+       ..++.+..+--.+    .++.  +.
T Consensus       153 ~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~-------~ADIVV~avG~~~----~i~~--~~  219 (285)
T PRK14189        153 GIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTR-------QADIVVAAVGKRN----VLTA--DM  219 (285)
T ss_pred             CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhh-------hCCEEEEcCCCcC----ccCH--HH
Confidence            456789999999999999999999999999999877654444433222       3445444443222    2211  22


Q ss_pred             hcCCCccEEEEecCCCCC-cccccccCCHHH
Q 025260          128 IEGLDVGVLINNVGISYP-YARFFHEVDQVL  157 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~-~~~~~~~~~~~~  157 (255)
                      +.   .+.+|-+.|+... ..+...|.+.+.
T Consensus       220 ik---~gavVIDVGin~~~~gkl~GDVd~~~  247 (285)
T PRK14189        220 VK---PGATVIDVGMNRDDAGKLCGDVDFAG  247 (285)
T ss_pred             cC---CCCEEEEccccccCCCCeeCCccHHH
Confidence            22   3367778887642 223344555443

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=96.38  E-value=0.027  Score=50.17  Aligned_cols=42  Identities=26%  Similarity=0.272  Sum_probs=35.7

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~   93 (255)
                      +|.+++|+|+++++|.+++..+...|+++++++++.++.+.+
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~  230 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYC  230 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            478999999999999999988888999998888877655433

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=96.37  E-value=0.026  Score=41.60  Aligned_cols=68  Identities=29%  Similarity=0.450  Sum_probs=49.5

Q ss_pred             chHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCccEEEEecCC
Q 025260           64 GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGI  142 (255)
Q Consensus        64 gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id~lv~nag~  142 (255)
                      |||...+.-+...|++|+++++++++.+.+++ +     +.   ....|-.+.  +..+++++..++..+|++|.++|.
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~-~-----Ga---~~~~~~~~~--~~~~~i~~~~~~~~~d~vid~~g~   68 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKE-L-----GA---DHVIDYSDD--DFVEQIRELTGGRGVDVVIDCVGS   68 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH-T-----TE---SEEEETTTS--SHHHHHHHHTTTSSEEEEEESSSS
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHh-h-----cc---ccccccccc--ccccccccccccccceEEEEecCc
Confidence            68999998888999999999999887655432 2     21   122444443  466788887776678899999983

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.37  E-value=0.047  Score=50.03  Aligned_cols=41  Identities=17%  Similarity=0.089  Sum_probs=35.7

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~   93 (255)
                      .+.+++|.|+ |.+|...+..+...|++|++.+++.+.++..
T Consensus       163 p~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a  203 (511)
T TIGR00561       163 PPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  203 (511)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            3689999996 8999999999999999999999998875544

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.37  E-value=0.12  Score=46.63  Aligned_cols=115  Identities=15%  Similarity=0.181  Sum_probs=75.2

Q ss_pred             cEEEEECCCCchHHHHHHHHHHc-------CC--cEEEEeCChhhHHHHHHHHHhhc-CCceEEEEEEECCCCcHHHHHH
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKT-------GL--NLVLVGRNPDKLKDVSDSIQAKY-AKTQIKSVVVDFSGDLDEGVER  123 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~-------G~--~V~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~  123 (255)
                      -.|.|+|++|.+|.++|..|+..       |.  ++++.+++++.++...-++.... +-..    .+.+...       
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~----~v~i~~~-------  169 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLR----EVSIGID-------  169 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcC----ceEEecC-------
Confidence            35899999999999999999988       64  79999999999988888877542 1111    1111111       


Q ss_pred             HHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhh--CCCcEEEEECC
Q 025260          124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK--RKKGAIVNIGS  193 (255)
Q Consensus       124 ~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~--~~~g~iv~vsS  193 (255)
                      -.+.+.  |-|++|..||....   +  .++..   +.++.|    ..+++...+.+.+  ..++.+|++|.
T Consensus       170 ~ye~~k--daDiVVitAG~prk---p--G~tR~---dLl~~N----~~I~k~i~~~I~~~a~p~~ivIVVsN  227 (444)
T PLN00112        170 PYEVFQ--DAEWALLIGAKPRG---P--GMERA---DLLDIN----GQIFAEQGKALNEVASRNVKVIVVGN  227 (444)
T ss_pred             CHHHhC--cCCEEEECCCCCCC---C--CCCHH---HHHHHH----HHHHHHHHHHHHHhcCCCeEEEEcCC
Confidence            133445  45599999997432   1  23332   334444    4556666776766  35677777774

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=96.35  E-value=0.031  Score=49.27  Aligned_cols=78  Identities=26%  Similarity=0.335  Sum_probs=52.0

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++|+|+|+ +++|...+..+...|+ +|+.+++++++++.+ +++     +.+ ..  .|..+  ++..+++.+..++
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~-----Ga~-~~--i~~~~--~~~~~~i~~~~~~  258 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-REL-----GAT-AT--VNAGD--PNAVEQVRELTGG  258 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHc-----CCc-eE--eCCCc--hhHHHHHHHHhCC
Confidence            4889999985 8999998888878899 699999988876544 222     221 11  22222  2344556555444


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                       .+|++|.+.|.
T Consensus       259 -g~d~vid~~G~  269 (371)
T cd08281         259 -GVDYAFEMAGS  269 (371)
T ss_pred             -CCCEEEECCCC
Confidence             67899998873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=96.34  E-value=0.02  Score=49.11  Aligned_cols=42  Identities=31%  Similarity=0.311  Sum_probs=36.9

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~   93 (255)
                      .+++++|.|+++++|.+++....+.|++|+.+++++++.+..
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL  187 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            368999999999999999999989999999999998775544

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=96.34  E-value=0.037  Score=47.93  Aligned_cols=79  Identities=22%  Similarity=0.386  Sum_probs=54.5

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      ++.+++|.|+++++|.+++..+.+.|++|+.+.+++++.+.. +++     +.+.   ..+..+.  +..+++.+..++.
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~~---v~~~~~~--~~~~~~~~~~~~~  233 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KEL-----GADA---FVDFKKS--DDVEAVKELTGGG  233 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc-----CCcE---EEcCCCc--cHHHHHHHHhcCC
Confidence            378999999999999999999999999999999998765543 332     1111   1222221  3445566555555


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      ++|+++++.+
T Consensus       234 ~vd~vl~~~~  243 (341)
T cd08297         234 GAHAVVVTAV  243 (341)
T ss_pred             CCCEEEEcCC
Confidence            6789988665

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.33  E-value=0.042  Score=47.30  Aligned_cols=116  Identities=17%  Similarity=0.255  Sum_probs=68.2

Q ss_pred             EEEEECCCCchHHHHHHHHHHcC--CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G--~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      .+.|+|++|.+|.++|..|+.+|  .++++.|.+  .++...-++....+..++  .... .+      +.+.+.+.  +
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i--~~~~-~~------~~~y~~~~--d   68 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKV--TGYL-GP------EELKKALK--G   68 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceE--EEec-CC------CchHHhcC--C
Confidence            57899999999999999999888  379999998  333333344432111111  1110 11      12445555  4


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECCcc
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGA  195 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS~~  195 (255)
                      -|++|..||....   +  .++.   .+.++.|..    +++...+.+.+. .++.++++|...
T Consensus        69 aDivvitaG~~~k---~--g~tR---~dll~~N~~----i~~~i~~~i~~~~p~a~vivvtNPv  120 (310)
T cd01337          69 ADVVVIPAGVPRK---P--GMTR---DDLFNINAG----IVRDLATAVAKACPKALILIISNPV  120 (310)
T ss_pred             CCEEEEeCCCCCC---C--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEccCch
Confidence            5599999998532   1  2333   334444544    445555545443 467888887654

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=96.33  E-value=0.036  Score=47.17  Aligned_cols=76  Identities=20%  Similarity=0.284  Sum_probs=51.5

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      +|.+++|.|+++++|.+++.....+|++|+.+++++++.+.+ .++     +.+.. +. + ..   +..+.+.+. + .
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~~~-~~-~-~~---~~~~~i~~~-~-~  207 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KEL-----GADEV-VI-D-DG---AIAEQLRAA-P-G  207 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc-----CCcEE-Ee-c-Cc---cHHHHHHHh-C-C
Confidence            479999999999999999999999999999999887765443 222     22111 11 1 22   223344443 3 3


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      ++|+++++.|
T Consensus       208 ~~d~vl~~~~  217 (320)
T cd08243         208 GFDKVLELVG  217 (320)
T ss_pred             CceEEEECCC
Confidence            6789998876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.30  E-value=0.027  Score=50.58  Aligned_cols=45  Identities=22%  Similarity=0.399  Sum_probs=38.7

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcC-CcEEEEeCChhhHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDS   96 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G-~~V~l~~r~~~~~~~~~~~   96 (255)
                      +.|++++|.|+ |.+|..+++.|.+.| .+|++++|+.++.++..++
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~  223 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKE  223 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            55899999997 999999999999999 6899999998876655544

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=96.29  E-value=0.039  Score=48.08  Aligned_cols=79  Identities=22%  Similarity=0.303  Sum_probs=53.7

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++++|+|+ +++|...++.+.+.|+ +|+++++++++.+.+ +++     +.+.   ..|..+.  +..+++.+..++
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~-----ga~~---~i~~~~~--~~~~~l~~~~~~  239 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EEL-----GATI---VLDPTEV--DVVAEVRKLTGG  239 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-----CCCE---EECCCcc--CHHHHHHHHhCC
Confidence            4899999985 8999999999999999 788888887776544 222     2211   1222222  344566665555


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                      ..+|+++.+.|.
T Consensus       240 ~~~d~vid~~g~  251 (351)
T cd08233         240 GGVDVSFDCAGV  251 (351)
T ss_pred             CCCCEEEECCCC
Confidence            458899998873

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=96.29  E-value=0.038  Score=48.56  Aligned_cols=80  Identities=21%  Similarity=0.202  Sum_probs=51.8

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++|+|.|+ +++|...+..+...|+ +|+.+++++++.+.+ +++     +.. ..+  |..+..++..+.+++..++
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~-----Ga~-~~i--~~~~~~~~~~~~v~~~~~~  256 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKF-----GVT-EFV--NPKDHDKPVQEVIAEMTGG  256 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCc-eEE--cccccchhHHHHHHHHhCC
Confidence            4899999985 8999998888888998 799999988766543 222     221 111  2221111333445554444


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                       .+|+++.+.|.
T Consensus       257 -~~d~vid~~G~  267 (369)
T cd08301         257 -GVDYSFECTGN  267 (369)
T ss_pred             -CCCEEEECCCC
Confidence             67899998774

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.28  E-value=0.015  Score=46.05  Aligned_cols=44  Identities=25%  Similarity=0.467  Sum_probs=36.0

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHh
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQA   99 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~   99 (255)
                      .|.|.|+ |-+|+.+|..++..|++|.+.+++++.+++..+.+++
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            3677887 8999999999999999999999999988877666543

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=96.26  E-value=0.038  Score=47.45  Aligned_cols=79  Identities=20%  Similarity=0.253  Sum_probs=54.2

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|.+++|.||++.+|.+++..+...|++|+.+++++++.+.. +++     +.. ..+  +..+  .+..+.+.+..++.
T Consensus       140 ~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~-~~~-----g~~-~~~--~~~~--~~~~~~~~~~~~~~  208 (327)
T PRK10754        140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRA-KKA-----GAW-QVI--NYRE--ENIVERVKEITGGK  208 (327)
T ss_pred             CCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHC-----CCC-EEE--cCCC--CcHHHHHHHHcCCC
Confidence            489999999999999999988888999999999887765543 222     121 112  2222  23445566655555


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      .+|+++++.|
T Consensus       209 ~~d~vl~~~~  218 (327)
T PRK10754        209 KVRVVYDSVG  218 (327)
T ss_pred             CeEEEEECCc
Confidence            6889998776

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=96.25  E-value=0.034  Score=48.61  Aligned_cols=82  Identities=15%  Similarity=0.243  Sum_probs=52.3

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++++|+| ++++|.+++..+...|+ +|+++++++++.+.+ +++     +.. ..+..+.. +..+..+.+.+..++
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~-~~~-----g~~-~vi~~~~~-~~~~~~~~i~~~~~~  247 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELA-REF-----GAD-ATIDIDEL-PDPQRRAIVRDITGG  247 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCC-eEEcCccc-ccHHHHHHHHHHhCC
Confidence            589999997 59999999988888999 899998887765433 222     221 11111111 111222345555554


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                      ..+|+++++.|.
T Consensus       248 ~~~d~vid~~g~  259 (361)
T cd08231         248 RGADVVIEASGH  259 (361)
T ss_pred             CCCcEEEECCCC
Confidence            468899998864

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=96.25  E-value=0.039  Score=49.37  Aligned_cols=88  Identities=14%  Similarity=0.099  Sum_probs=52.7

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC---cEEEEeCChhhHHHHHHHHHhhc--CCceEEEEEEECCCCcHHHHHHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL---NLVLVGRNPDKLKDVSDSIQAKY--AKTQIKSVVVDFSGDLDEGVERIKE  126 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~---~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~  126 (255)
                      .|.+++|.||+|++|...+..+...|+   +|+++++++++++.+.+-.....  .+.....  .|..+ .++..+.+.+
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~--i~~~~-~~~~~~~v~~  251 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLY--VNPAT-IDDLHATLME  251 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEE--ECCCc-cccHHHHHHH
Confidence            478999999999999998776666553   79999999888775543211000  0111111  22221 1133344555


Q ss_pred             HhcCCCccEEEEecCC
Q 025260          127 AIEGLDVGVLINNVGI  142 (255)
Q Consensus       127 ~~~~~~id~lv~nag~  142 (255)
                      ..++..+|++|.+.|.
T Consensus       252 ~t~g~g~D~vid~~g~  267 (410)
T cd08238         252 LTGGQGFDDVFVFVPV  267 (410)
T ss_pred             HhCCCCCCEEEEcCCC
Confidence            4444457788887763

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PRK04148 hypothetical protein; Provisional

Probab=96.24  E-value=0.039  Score=41.24  Aligned_cols=54  Identities=13%  Similarity=0.180  Sum_probs=41.2

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG  115 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  115 (255)
                      +++.+++.|.+  -|.++|..|++.|++|+.+|.++...+.+.+.        ....+..|+.+
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~--------~~~~v~dDlf~   69 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL--------GLNAFVDDLFN   69 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh--------CCeEEECcCCC
Confidence            36789999988  78889999999999999999999876655332        23555566644

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=96.22  E-value=0.019  Score=49.72  Aligned_cols=85  Identities=19%  Similarity=0.270  Sum_probs=53.3

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC-cHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD-LDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~~  130 (255)
                      +|++++|.|+++++|.++++.+...|++|+.++++.+..++..+.+++.+ ...+  +  +..+. .....+.+....++
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g-~~~~--~--~~~~~~~~~~~~~i~~~~~~  220 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALG-ADHV--L--TEEELRSLLATELLKSAPGG  220 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcC-CCEE--E--eCcccccccHHHHHHHHcCC
Confidence            48999999999999999999999999999998887643333333333322 1111  1  11110 01233445544444


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                       ++|.++++.|.
T Consensus       221 -~~d~vld~~g~  231 (341)
T cd08290         221 -RPKLALNCVGG  231 (341)
T ss_pred             -CceEEEECcCc
Confidence             67899988773

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.22  E-value=0.042  Score=46.83  Aligned_cols=39  Identities=23%  Similarity=0.238  Sum_probs=35.5

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEe-CCh
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNP   87 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~-r~~   87 (255)
                      ++++||.|+|.|-++-+|+.+|..|.++|++|.++. |+.
T Consensus       154 i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~  193 (296)
T PRK14188        154 GDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR  193 (296)
T ss_pred             CCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence            467799999999999999999999999999999994 665

>PRK06932 glycerate dehydrogenase; Provisional

Probab=96.22  E-value=0.0077  Score=51.98  Aligned_cols=90  Identities=10%  Similarity=0.132  Sum_probs=58.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhH-HHHHHHHHhhcCCceEEEEEEECCCCcHHHH-HHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL-KDVSDSIQAKYAKTQIKSVVVDFSGDLDEGV-ERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~~  127 (255)
                      .++||++.|.|- |.||+++|+.+...|++|+..+|..... ......+.+.....++..+.+.++++-+..+ ++..+.
T Consensus       144 ~l~gktvgIiG~-G~IG~~va~~l~~fg~~V~~~~~~~~~~~~~~~~~l~ell~~sDiv~l~~Plt~~T~~li~~~~l~~  222 (314)
T PRK06932        144 DVRGSTLGVFGK-GCLGTEVGRLAQALGMKVLYAEHKGASVCREGYTPFEEVLKQADIVTLHCPLTETTQNLINAETLAL  222 (314)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCcccccccccCCHHHHHHhCCEEEEcCCCChHHhcccCHHHHHh
Confidence            477999999997 7999999999999999999988754211 0001122332335678888888876533333 333333


Q ss_pred             hcCCCccEEEEecCCC
Q 025260          128 IEGLDVGVLINNVGIS  143 (255)
Q Consensus       128 ~~~~~id~lv~nag~~  143 (255)
                      +++   +.++-|.|..
T Consensus       223 mk~---ga~lIN~aRG  235 (314)
T PRK06932        223 MKP---TAFLINTGRG  235 (314)
T ss_pred             CCC---CeEEEECCCc
Confidence            333   3566666654

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.21  E-value=0.015  Score=49.33  Aligned_cols=44  Identities=14%  Similarity=0.262  Sum_probs=37.9

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK   91 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~   91 (255)
                      .++++||.++|.|.|.-+|+.++..|.++|++|.++.+....++
T Consensus       153 ~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~  196 (286)
T PRK14175        153 DIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMA  196 (286)
T ss_pred             CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHH
Confidence            34677999999999999999999999999999999887654433

>PLN02494 adenosylhomocysteinase

Probab=96.21  E-value=0.062  Score=48.61  Aligned_cols=41  Identities=20%  Similarity=0.289  Sum_probs=36.0

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL   90 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~   90 (255)
                      ..+.||+++|.|.+ .||+.+|+.+...|++|+++++++.+.
T Consensus       250 i~LaGKtVvViGyG-~IGr~vA~~aka~Ga~VIV~e~dp~r~  290 (477)
T PLN02494        250 VMIAGKVAVICGYG-DVGKGCAAAMKAAGARVIVTEIDPICA  290 (477)
T ss_pred             CccCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhh
Confidence            34679999999987 899999999999999999999987653

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.21  E-value=0.031  Score=50.52  Aligned_cols=40  Identities=38%  Similarity=0.626  Sum_probs=34.9

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHH
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS   94 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~   94 (255)
                      ++.|.||.|++|.++|+.|.+.|.+|.+.+|+++...+..
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a   41 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVA   41 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHH
Confidence            5889999999999999999999999999999987654433

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.20  E-value=0.057  Score=45.68  Aligned_cols=43  Identities=16%  Similarity=0.312  Sum_probs=36.3

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL   90 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~   90 (255)
                      .++++||.|+|.|.|.-+|+.+|..|.++|++|.++......+
T Consensus       152 ~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l  194 (285)
T PRK14191        152 HIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDL  194 (285)
T ss_pred             CCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHH
Confidence            3567799999999999999999999999999998875444333

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.18  E-value=0.05  Score=46.05  Aligned_cols=37  Identities=27%  Similarity=0.358  Sum_probs=33.8

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEe
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG   84 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~   84 (255)
                      .++++||.++|.|.|+-+|+.+|..|.++|++|.++.
T Consensus       153 ~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~  189 (284)
T PRK14179        153 NVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTH  189 (284)
T ss_pred             CCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEEC
Confidence            4567799999999999999999999999999999873

>PLN02827 Alcohol dehydrogenase-like

Probab=96.17  E-value=0.053  Score=47.98  Aligned_cols=80  Identities=20%  Similarity=0.186  Sum_probs=50.6

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCc-EEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~-V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++|+|.|+ |++|...+..+...|++ |+.+++++++.+.+ +++     +.+. .  .|..+..+...+.+.+..++
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~l-----Ga~~-~--i~~~~~~~~~~~~v~~~~~~  262 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KTF-----GVTD-F--INPNDLSEPIQQVIKRMTGG  262 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc-----CCcE-E--EcccccchHHHHHHHHHhCC
Confidence            4899999985 89999998888889985 77778777665433 222     2211 1  22221112333445544444


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                       .+|+++.++|.
T Consensus       263 -g~d~vid~~G~  273 (378)
T PLN02827        263 -GADYSFECVGD  273 (378)
T ss_pred             -CCCEEEECCCC
Confidence             57799998884

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.17  E-value=0.045  Score=48.74  Aligned_cols=64  Identities=23%  Similarity=0.303  Sum_probs=47.6

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh-------------------hhHHHHHHHHHhhcCCceEEEE
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKSV  109 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~  109 (255)
                      ++++..|+|.|+ ||+|.++++.|++.|. ++.++|.+.                   .+.+.+.+.+++.++..++..+
T Consensus        39 ~L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~  117 (392)
T PRK07878         39 RLKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLH  117 (392)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEE
Confidence            456888999986 5999999999999997 788877542                   2455566777777777777665


Q ss_pred             EEECC
Q 025260          110 VVDFS  114 (255)
Q Consensus       110 ~~d~~  114 (255)
                      ...++
T Consensus       118 ~~~i~  122 (392)
T PRK07878        118 EFRLD  122 (392)
T ss_pred             eccCC
Confidence            54443

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.14  E-value=0.1  Score=44.27  Aligned_cols=45  Identities=20%  Similarity=0.290  Sum_probs=37.4

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD   92 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~   92 (255)
                      .++++||.|+|.|.|.-+|+-++.-|.++|++|.++.+....+++
T Consensus       150 ~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~~  194 (287)
T PRK14173        150 GIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLPA  194 (287)
T ss_pred             CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence            456789999999999999999999999999999876554444443

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=96.11  E-value=0.034  Score=46.94  Aligned_cols=77  Identities=23%  Similarity=0.202  Sum_probs=48.3

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCc-EEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~-V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++|+|.|+ +++|...+..+...|++ |+++++++++++.+ +++     +... .+  |..+    ..+.+.+..++
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a-~~~-----Ga~~-~i--~~~~----~~~~~~~~~~~  185 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELA-LSF-----GATA-LA--EPEV----LAERQGGLQNG  185 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc-----CCcE-ec--Cchh----hHHHHHHHhCC
Confidence            5899999986 89999998888888997 88888877765432 222     2211 11  1111    12333333333


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                      ..+|+++.+.|.
T Consensus       186 ~g~d~vid~~G~  197 (280)
T TIGR03366       186 RGVDVALEFSGA  197 (280)
T ss_pred             CCCCEEEECCCC
Confidence            357799988773

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.10  E-value=0.1  Score=44.09  Aligned_cols=94  Identities=17%  Similarity=0.288  Sum_probs=57.3

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      .++++||.++|.|.|.-+|+-++.-|.++|++|.++......+++..+       .+++.+..+-..+-       +...
T Consensus       151 ~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~-------~ADIvI~AvG~p~~-------i~~~  216 (282)
T PRK14169        151 DIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQLTK-------EADILVVAVGVPHF-------IGAD  216 (282)
T ss_pred             CCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHHHh-------hCCEEEEccCCcCc-------cCHH
Confidence            456789999999999999999999999999999877543333433222       34455544443321       2222


Q ss_pred             hcCCCccEEEEecCCCC-CcccccccCCHHH
Q 025260          128 IEGLDVGVLINNVGISY-PYARFFHEVDQVL  157 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~-~~~~~~~~~~~~~  157 (255)
                      +=+..  .+|-.+|+.. ..++...|.+.++
T Consensus       217 ~vk~G--avVIDvGin~~~~gkl~GDVd~~~  245 (282)
T PRK14169        217 AVKPG--AVVIDVGISRGADGKLLGDVDEAA  245 (282)
T ss_pred             HcCCC--cEEEEeeccccCCCCeeecCcHHH
Confidence            21113  5666677754 1223344555444

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.10  E-value=0.041  Score=49.53  Aligned_cols=45  Identities=22%  Similarity=0.443  Sum_probs=38.8

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDS   96 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~   96 (255)
                      +.+++++|.|+ |++|..+++.|...|+ +|++++|+.++.++..++
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~  225 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEE  225 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH
Confidence            56899999987 9999999999999997 799999998877665554

>PLN00203 glutamyl-tRNA reductase

Probab=96.10  E-value=0.047  Score=50.33  Aligned_cols=46  Identities=22%  Similarity=0.439  Sum_probs=40.4

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSI   97 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~   97 (255)
                      +.++.++|.|+ |++|..+++.|...|+ +|++++|+.++.++..+++
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~  310 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF  310 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence            55899999999 9999999999999997 7999999998887766554

>PLN02602 lactate dehydrogenase

Probab=96.06  E-value=0.36  Score=42.30  Aligned_cols=116  Identities=20%  Similarity=0.249  Sum_probs=72.0

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      +.+.|+|+ |.+|.++|..++..|.  ++++.|.+++.++....++....+-.....+..  ..+        .+.+.  
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~--~~d--------y~~~~--  104 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILA--STD--------YAVTA--  104 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEe--CCC--------HHHhC--
Confidence            68999996 9999999999998884  699999999887777777765321111111111  111        12244  


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECCc
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSG  194 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS~  194 (255)
                      +-|++|..||....   +  .++..   +.+..    ...+++.+.+.+.+. .++.++++|..
T Consensus       105 daDiVVitAG~~~k---~--g~tR~---dll~~----N~~I~~~i~~~I~~~~p~~ivivvtNP  156 (350)
T PLN02602        105 GSDLCIVTAGARQI---P--GESRL---NLLQR----NVALFRKIIPELAKYSPDTILLIVSNP  156 (350)
T ss_pred             CCCEEEECCCCCCC---c--CCCHH---HHHHH----HHHHHHHHHHHHHHHCCCeEEEEecCc
Confidence            45599999997532   1  23332   22333    344556666656554 36778888753

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=96.05  E-value=0.064  Score=46.47  Aligned_cols=90  Identities=9%  Similarity=0.103  Sum_probs=57.7

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHH-HcCCcEEEEeCChhhHHHH-----HHHHHhhcCCceEEEEEEECCCCcHHHH-H
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLA-KTGLNLVLVGRNPDKLKDV-----SDSIQAKYAKTQIKSVVVDFSGDLDEGV-E  122 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la-~~G~~V~l~~r~~~~~~~~-----~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~  122 (255)
                      .++||++.|.|- |.||+++|+.+. ..|++|+..+|........     ..++.+.....++..+.+.++++.+..+ +
T Consensus       142 ~L~gktvGIiG~-G~IG~~va~~l~~~fgm~V~~~~~~~~~~~~~~~~~~~~~l~ell~~sDvv~lh~plt~~T~~li~~  220 (323)
T PRK15409        142 DVHHKTLGIVGM-GRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCIILPLTDETHHLFGA  220 (323)
T ss_pred             CCCCCEEEEEcc-cHHHHHHHHHHHhcCCCEEEEECCCCchhhHHhcCcEecCHHHHHHhCCEEEEeCCCChHHhhccCH
Confidence            478999999997 799999999997 8899999888764221100     0122222235678888888876544444 3


Q ss_pred             HHHHHhcCCCccEEEEecCCC
Q 025260          123 RIKEAIEGLDVGVLINNVGIS  143 (255)
Q Consensus       123 ~~~~~~~~~~id~lv~nag~~  143 (255)
                      +..+.++   .+.++-|.|..
T Consensus       221 ~~l~~mk---~ga~lIN~aRG  238 (323)
T PRK15409        221 EQFAKMK---SSAIFINAGRG  238 (323)
T ss_pred             HHHhcCC---CCeEEEECCCc
Confidence            3333333   33566666653

>PRK14851 hypothetical protein; Provisional

Probab=96.02  E-value=0.049  Score=51.82  Aligned_cols=67  Identities=13%  Similarity=0.214  Sum_probs=50.9

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh-------------------hhHHHHHHHHHhhcCCceEE
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIK  107 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~  107 (255)
                      +-++++.+|+|.| .||+|..+++.|++.|. ++.++|.+.                   .|.+...+.+.+.++..++.
T Consensus        38 Q~kL~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~  116 (679)
T PRK14851         38 QERLAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEIT  116 (679)
T ss_pred             HHHHhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEE
Confidence            3457789999998 56999999999999997 788877541                   24555667777777777787


Q ss_pred             EEEEECCC
Q 025260          108 SVVVDFSG  115 (255)
Q Consensus       108 ~~~~d~~~  115 (255)
                      .+...+++
T Consensus       117 ~~~~~i~~  124 (679)
T PRK14851        117 PFPAGINA  124 (679)
T ss_pred             EEecCCCh
Confidence            77766653

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=95.98  E-value=0.035  Score=47.81  Aligned_cols=115  Identities=17%  Similarity=0.229  Sum_probs=67.0

Q ss_pred             EEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      +.|+|++|.+|.++|..|+.+|.  ++++.|+++  .+....++......  .......- +      +...+.+.  +-
T Consensus         2 V~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~~~--~~i~~~~~-~------~~~~~~~~--da   68 (312)
T TIGR01772         2 VAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIPTA--ASVKGFSG-E------EGLENALK--GA   68 (312)
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCCcC--ceEEEecC-C------CchHHHcC--CC
Confidence            68999999999999999998885  799999987  22222223221100  11111010 1      12344555  45


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCcc
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGA  195 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~  195 (255)
                      |++|..||....   +  ..+.   .+.++.|..    +.+...+.+.+.. ++.++++|...
T Consensus        69 DivvitaG~~~~---~--g~~R---~dll~~N~~----I~~~i~~~i~~~~p~~iiivvsNPv  119 (312)
T TIGR01772        69 DVVVIPAGVPRK---P--GMTR---DDLFNVNAG----IVKDLVAAVAESCPKAMILVITNPV  119 (312)
T ss_pred             CEEEEeCCCCCC---C--CccH---HHHHHHhHH----HHHHHHHHHHHhCCCeEEEEecCch
Confidence            599999997532   1  2233   234455544    5666666665544 67777777644

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.98  E-value=0.021  Score=46.52  Aligned_cols=42  Identities=29%  Similarity=0.438  Sum_probs=37.0

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHH
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDS   96 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~   96 (255)
                      .+.|.||+|.+|.+++..|++.|++|.+.+|++++.++..++
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            478999999999999999999999999999998887665554

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=95.97  E-value=0.32  Score=41.93  Aligned_cols=117  Identities=21%  Similarity=0.283  Sum_probs=72.0

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      ..+.|+|+ |.+|.++|..++..|.  ++++.|.+++.++....++....+-....  .+-.+.+       . +.+.  
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~--~v~~~~d-------y-~~~~--   70 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNP--KIEADKD-------Y-SVTA--   70 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCC--EEEECCC-------H-HHhC--
Confidence            46889996 9999999999998884  69999999887777777776543111111  1111111       1 2234  


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECCcc
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGA  195 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS~~  195 (255)
                      +.|++|..||....     ..++..+   .++.|    ..+.+.+.+.+.+. .++.++++|...
T Consensus        71 ~adivvitaG~~~k-----~g~~R~d---ll~~N----~~i~~~~~~~i~~~~p~~~vivvsNP~  123 (312)
T cd05293          71 NSKVVIVTAGARQN-----EGESRLD---LVQRN----VDIFKGIIPKLVKYSPNAILLVVSNPV  123 (312)
T ss_pred             CCCEEEECCCCCCC-----CCCCHHH---HHHHH----HHHHHHHHHHHHHhCCCcEEEEccChH
Confidence            45599999997532     1234332   33433    44556656555544 367788887533

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00936 ahcY adenosylhomocysteinase

Probab=95.96  E-value=0.098  Score=46.66  Aligned_cols=43  Identities=23%  Similarity=0.289  Sum_probs=36.3

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK   91 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~   91 (255)
                      +..+.|++|+|.|. |.||+.+|+.+...|++|+++++++.+..
T Consensus       190 ~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~  232 (406)
T TIGR00936       190 NLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRAL  232 (406)
T ss_pred             CCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHH
Confidence            33467999999995 57999999999999999999998886543

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=95.95  E-value=0.04  Score=47.68  Aligned_cols=91  Identities=14%  Similarity=0.188  Sum_probs=59.7

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh-hHHHHH----HHHHhhcCCceEEEEEEECCCCcHHHH-H
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD-KLKDVS----DSIQAKYAKTQIKSVVVDFSGDLDEGV-E  122 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~-~~~~~~----~~~~~~~~~~~~~~~~~d~~~~~~~~~-~  122 (255)
                      .+++||++-|.|- |.||+++|+.+...|++|+..+|++. +.++..    -++.+.-...++..+.|.++++-+..+ +
T Consensus       142 ~~l~gktvGIiG~-GrIG~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y~~l~ell~~sDii~l~~Plt~~T~hLin~  220 (324)
T COG1052         142 FDLRGKTLGIIGL-GRIGQAVARRLKGFGMKVLYYDRSPNPEAEKELGARYVDLDELLAESDIISLHCPLTPETRHLINA  220 (324)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCCChHHHhhcCceeccHHHHHHhCCEEEEeCCCChHHhhhcCH
Confidence            3577999999984 68999999999999999999998863 111100    002222235678888998887655544 4


Q ss_pred             HHHHHhcCCCccEEEEecCCC
Q 025260          123 RIKEAIEGLDVGVLINNVGIS  143 (255)
Q Consensus       123 ~~~~~~~~~~id~lv~nag~~  143 (255)
                      +..+.++..   +++-|.|..
T Consensus       221 ~~l~~mk~g---a~lVNtaRG  238 (324)
T COG1052         221 EELAKMKPG---AILVNTARG  238 (324)
T ss_pred             HHHHhCCCC---eEEEECCCc
Confidence            444445543   455555543

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.95  E-value=0.069  Score=45.23  Aligned_cols=45  Identities=22%  Similarity=0.295  Sum_probs=38.0

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD   92 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~   92 (255)
                      .++++||.++|.|.|.-+|+.++.-|.++|++|.++......+++
T Consensus       159 ~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~  203 (287)
T PRK14176        159 GVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKK  203 (287)
T ss_pred             CCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHH
Confidence            356779999999999999999999999999999888755444443

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.93  E-value=0.022  Score=48.11  Aligned_cols=43  Identities=23%  Similarity=0.351  Sum_probs=37.2

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHH
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDS   96 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~   96 (255)
                      ++.++|.|+ ||-+++++..|++.|+ +|.+++|+.++.++..++
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~  165 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAEL  165 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            468899986 8999999999999998 599999999887776554

>PRK07877 hypothetical protein; Provisional

Probab=95.91  E-value=0.045  Score=52.33  Aligned_cols=65  Identities=20%  Similarity=0.167  Sum_probs=51.1

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCC--cEEEEeCCh------------------hhHHHHHHHHHhhcCCceEE
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNP------------------DKLKDVSDSIQAKYAKTQIK  107 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~------------------~~~~~~~~~~~~~~~~~~~~  107 (255)
                      +-++++++|+|.|+  |+|..++..|++.|-  ++.++|.+.                  .|.+.+.+.+.+.++..++.
T Consensus       102 Q~~L~~~~V~IvG~--GlGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~  179 (722)
T PRK07877        102 QERLGRLRIGVVGL--SVGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVE  179 (722)
T ss_pred             HHHHhcCCEEEEEe--cHHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEE
Confidence            33577899999999  499999999999993  899887652                  35556777788888888888


Q ss_pred             EEEEECC
Q 025260          108 SVVVDFS  114 (255)
Q Consensus       108 ~~~~d~~  114 (255)
                      .+...++
T Consensus       180 ~~~~~i~  186 (722)
T PRK07877        180 VFTDGLT  186 (722)
T ss_pred             EEeccCC
Confidence            8777665

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=95.91  E-value=0.1  Score=43.38  Aligned_cols=81  Identities=15%  Similarity=0.176  Sum_probs=53.7

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|.+++|.|+++++|..++......|++|+.++++.++.+...+    .++... .  ..|..+  .+..+++.+..++.
T Consensus       108 ~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~~~~~~-~--~~~~~~--~~~~~~~~~~~~~~  178 (293)
T cd05195         108 KGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRE----LGGPVD-H--IFSSRD--LSFADGILRATGGR  178 (293)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----hCCCcc-e--EeecCc--hhHHHHHHHHhCCC
Confidence            47899999999999999998888899999999988766554432    221011 1  112111  24445566555444


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      .+|.++.+.|
T Consensus       179 ~~d~vi~~~~  188 (293)
T cd05195         179 GVDVVLNSLS  188 (293)
T ss_pred             CceEEEeCCC
Confidence            6778888776

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.90  E-value=0.083  Score=44.72  Aligned_cols=45  Identities=22%  Similarity=0.474  Sum_probs=38.5

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD   92 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~   92 (255)
                      .++++||.++|.|-|.-+|+.++.-|.++|++|.++.+....+++
T Consensus       154 ~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~  198 (285)
T PRK10792        154 GIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRH  198 (285)
T ss_pred             CCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHH
Confidence            356779999999999999999999999999999998776554443

>PTZ00117 malate dehydrogenase; Provisional

Probab=95.90  E-value=0.076  Score=45.94  Aligned_cols=120  Identities=13%  Similarity=0.164  Sum_probs=69.6

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcC-CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G-~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      +.+.+.|.|| |.+|..++..++..| +++++.|++++.++...-++......... ......+.       ... .+. 
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~-~~~i~~~~-------d~~-~l~-   72 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGS-NINILGTN-------NYE-DIK-   72 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCC-CeEEEeCC-------CHH-HhC-
Confidence            4678899997 889999999999999 79999999987654333333221100000 00111111       122 444 


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCcc
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGA  195 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~  195 (255)
                       +-|++|.++|....     ...+.   ...+..|.    .+.+.+.+.+.+.. ++.++++|...
T Consensus        73 -~ADiVVitag~~~~-----~g~~r---~dll~~n~----~i~~~i~~~i~~~~p~a~vivvsNP~  125 (319)
T PTZ00117         73 -DSDVVVITAGVQRK-----EEMTR---EDLLTING----KIMKSVAESVKKYCPNAFVICVTNPL  125 (319)
T ss_pred             -CCCEEEECCCCCCC-----CCCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecChH
Confidence             44599999987532     12233   23444554    45666666665543 56677776543

>PRK05442 malate dehydrogenase; Provisional

Probab=95.90  E-value=0.099  Score=45.36  Aligned_cols=115  Identities=18%  Similarity=0.187  Sum_probs=69.5

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCC-------cEEEEeCChh--hHHHHHHHHHhhc-CCceEEEEEEECCCCcHHHHHH
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGL-------NLVLVGRNPD--KLKDVSDSIQAKY-AKTQIKSVVVDFSGDLDEGVER  123 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~-------~V~l~~r~~~--~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~  123 (255)
                      +.+.|+|++|.+|..+|..|+..|.       ++++.|.+++  +++....++.... +...    ...++.       .
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~----~~~i~~-------~   73 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLA----GVVITD-------D   73 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcC----CcEEec-------C
Confidence            4689999999999999999998774       6999998653  3444444444321 1100    011111       1


Q ss_pred             HHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhh-C-CCcEEEEECC
Q 025260          124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK-R-KKGAIVNIGS  193 (255)
Q Consensus       124 ~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~-~-~~g~iv~vsS  193 (255)
                      ..+.+.  |-|++|..||....   +  ..+..   +.++.|    ..+++.+.+.+.+ . ..+.++++|.
T Consensus        74 ~y~~~~--daDiVVitaG~~~k---~--g~tR~---dll~~N----a~i~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         74 PNVAFK--DADVALLVGARPRG---P--GMERK---DLLEAN----GAIFTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             hHHHhC--CCCEEEEeCCCCCC---C--CCcHH---HHHHHH----HHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence            234455  45599999997432   1  23333   333433    5566777777766 3 3677888774

>smart00829 PKS_ER Enoylreductase

Probab=95.89  E-value=0.071  Score=44.29  Aligned_cols=81  Identities=16%  Similarity=0.208  Sum_probs=52.9

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|.+++|.|+++++|..++......|++|+.+++++++.+.. +++   +...+ ..  .+..+.  +..+++.+..++.
T Consensus       104 ~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~~-~~--~~~~~~--~~~~~~~~~~~~~  174 (288)
T smart00829      104 PGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFL-REL---GIPDD-HI--FSSRDL--SFADEILRATGGR  174 (288)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCChh-he--eeCCCc--cHHHHHHHHhCCC
Confidence            478999999999999999988888999999999988776654 222   11001 11  121211  2334455555544


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      .+|.++.+.|
T Consensus       175 ~~d~vi~~~~  184 (288)
T smart00829      175 GVDVVLNSLA  184 (288)
T ss_pred             CcEEEEeCCC
Confidence            5778887765

Enoylreductase in Polyketide synthases.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.89  E-value=0.063  Score=48.59  Aligned_cols=40  Identities=15%  Similarity=0.403  Sum_probs=35.0

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHH
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSD   95 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~   95 (255)
                      .++|.|+ |.+|.++++.|.++|..|++++++++..++..+
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~   41 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQD   41 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh
Confidence            5788887 999999999999999999999999887766543

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=95.88  E-value=0.17  Score=47.41  Aligned_cols=87  Identities=16%  Similarity=0.252  Sum_probs=60.0

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCC----------------------hhhHHHHHHHHHhhcCCceEE
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN----------------------PDKLKDVSDSIQAKYAKTQIK  107 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~----------------------~~~~~~~~~~~~~~~~~~~~~  107 (255)
                      +++.+|+|.|+ ||+|..+|+.|++.|. +++++|.+                      ..+.+.+.+.+++.+|..++.
T Consensus       336 L~~~kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD~D~Ve~SNL~RQ~Lf~~~Dv~~~Gk~KA~aAa~~Lk~InP~v~i~  414 (664)
T TIGR01381       336 YSQLKVLLLGA-GTLGCNVARCLIGWGVRHITFVDNGKVSYSNPVRQSLSNFEDCLLGGRGKAETAQKALKRIFPSIQAT  414 (664)
T ss_pred             HhcCeEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEECCCccccccccchhhhhhcCCcHHHHHHHHHHHHCCCcEEE
Confidence            67889999987 5899999999999997 78887743                      124455677788888888888


Q ss_pred             EEEEEC-------CC----CcHHHHHHHHHHhcCCCccEEEEec
Q 025260          108 SVVVDF-------SG----DLDEGVERIKEAIEGLDVGVLINNV  140 (255)
Q Consensus       108 ~~~~d~-------~~----~~~~~~~~~~~~~~~~~id~lv~na  140 (255)
                      .+...+       ++    +..+..+.+.+.+.+.|  +++.+.
T Consensus       415 ~~~~~Ipm~Gh~i~~~~~~~~~~d~~~l~~Li~~~D--vV~d~t  456 (664)
T TIGR01381       415 GHRLTVPMPGHPIDEKDVPELEKDIARLEQLIKDHD--VVFLLL  456 (664)
T ss_pred             EeeeeeccccccCCchhhhhccccHHHHHHHHhhCC--EEEECC
Confidence            777664       21    11223344555555545  666544

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=95.88  E-value=0.053  Score=43.56  Aligned_cols=72  Identities=18%  Similarity=0.331  Sum_probs=48.0

Q ss_pred             EEECCCCchHHHHHHHHHHcCCcEEEEeCCh-hhHHHHHHHHHhh---------cCCceEEEEEEECCCCcHHHHHHHHH
Q 025260           57 LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAK---------YAKTQIKSVVVDFSGDLDEGVERIKE  126 (255)
Q Consensus        57 lITGas~gIG~~la~~la~~G~~V~l~~r~~-~~~~~~~~~~~~~---------~~~~~~~~~~~d~~~~~~~~~~~~~~  126 (255)
                      ...||+|.||.+++++|++.|++|++.+|+. ++++...+++...         ....++.++.+... .+.+..+.+.+
T Consensus         4 ~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~~-a~~~v~~~l~~   82 (211)
T COG2085           4 IAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPFE-AIPDVLAELRD   82 (211)
T ss_pred             EEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccHH-HHHhHHHHHHH
Confidence            4568889999999999999999999996555 4455444443211         11244555555443 44567777777


Q ss_pred             Hhc
Q 025260          127 AIE  129 (255)
Q Consensus       127 ~~~  129 (255)
                      .++
T Consensus        83 ~~~   85 (211)
T COG2085          83 ALG   85 (211)
T ss_pred             HhC
Confidence            776

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.87  E-value=0.099  Score=44.26  Aligned_cols=45  Identities=18%  Similarity=0.298  Sum_probs=37.5

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD   92 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~   92 (255)
                      .++++||.++|.|.|.-+|+-++.-|.++|++|.++......+++
T Consensus       153 ~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~  197 (284)
T PRK14190        153 NIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAE  197 (284)
T ss_pred             CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHH
Confidence            356789999999999999999999999999999887654444443

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.86  E-value=0.068  Score=45.11  Aligned_cols=94  Identities=22%  Similarity=0.258  Sum_probs=56.8

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      .++++||.++|.|.|.-+|+-++..|.++|++|.++-.....+++..   +    .+++.+..+.-.+       -+...
T Consensus       152 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~~~~---~----~ADIvV~AvGkp~-------~i~~~  217 (281)
T PRK14183        152 EIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLKAHT---K----KADIVIVGVGKPN-------LITED  217 (281)
T ss_pred             CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHHHHH---h----hCCEEEEecCccc-------ccCHH
Confidence            45678999999999999999999999999999986654333333222   1    3445544443332       12222


Q ss_pred             hcCCCccEEEEecCCCCC-cccccccCCHHH
Q 025260          128 IEGLDVGVLINNVGISYP-YARFFHEVDQVL  157 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~-~~~~~~~~~~~~  157 (255)
                      +=  ..+.+|-.+|+... .++...|.+.++
T Consensus       218 ~v--k~gavvIDvGin~~~~gkl~GDVd~~~  246 (281)
T PRK14183        218 MV--KEGAIVIDIGINRTEDGRLVGDVDFEN  246 (281)
T ss_pred             Hc--CCCcEEEEeeccccCCCCeECCccHHH
Confidence            21  12267777787541 223344555443

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=95.85  E-value=0.085  Score=45.62  Aligned_cols=78  Identities=23%  Similarity=0.345  Sum_probs=51.5

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCc-EEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~-V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      +|++++|+| ++++|.+++..+...|++ |+++.+++++.+... ++     +.+ ..  .+-.+  .+..+.+.+..++
T Consensus       165 ~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~-~~-----g~~-~~--~~~~~--~~~~~~i~~~~~~  232 (343)
T cd08235         165 PGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAK-KL-----GAD-YT--IDAAE--EDLVEKVRELTDG  232 (343)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-Hh-----CCc-EE--ecCCc--cCHHHHHHHHhCC
Confidence            478999996 689999998888889999 888888877665442 22     111 11  11112  1344555555555


Q ss_pred             CCccEEEEecC
Q 025260          131 LDVGVLINNVG  141 (255)
Q Consensus       131 ~~id~lv~nag  141 (255)
                      ..+|++++++|
T Consensus       233 ~~vd~vld~~~  243 (343)
T cd08235         233 RGADVVIVATG  243 (343)
T ss_pred             cCCCEEEECCC
Confidence            46789999877

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=95.85  E-value=0.087  Score=44.84  Aligned_cols=59  Identities=17%  Similarity=0.298  Sum_probs=45.0

Q ss_pred             EEEECCCCchHHHHHHHHHHcCC-cEEEEeCC-------------------hhhHHHHHHHHHhhcCCceEEEEEEECCC
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN-------------------PDKLKDVSDSIQAKYAKTQIKSVVVDFSG  115 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~-~V~l~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  115 (255)
                      |+|.| .||+|.++++.|+..|. ++.++|.+                   ..+.+.+.+.+++.++..++..+..++.+
T Consensus         2 VlVVG-aGGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~~~~~i~~   80 (291)
T cd01488           2 ILVIG-AGGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTPHFGKIQD   80 (291)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEEEecccCc
Confidence            66776 67999999999999997 78887643                   23455666777888888888887776654

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=95.85  E-value=0.046  Score=47.56  Aligned_cols=41  Identities=22%  Similarity=0.293  Sum_probs=34.5

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDV   93 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~   93 (255)
                      .|++|+|+|+ |++|...+.-+...|+ +|+++++++++++.+
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a  210 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA  210 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH
Confidence            4899999986 8999999988888898 588899998776543

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.85  E-value=0.089  Score=44.48  Aligned_cols=94  Identities=22%  Similarity=0.314  Sum_probs=58.5

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      .++++||.++|.|.|.-+|+-++.-|.++|++|.++.+....+.+..+       .+++.+..+-..+-       +...
T Consensus       153 ~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~~~k-------~ADIvIsAvGkp~~-------i~~~  218 (282)
T PRK14180        153 GIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSHTT-------KADILIVAVGKPNF-------ITAD  218 (282)
T ss_pred             CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHHHhh-------hcCEEEEccCCcCc-------CCHH
Confidence            356779999999999999999999999999999887655444443322       34454444433321       2222


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHH
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVL  157 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~  157 (255)
                      +=  +.+.+|-.+|+....++...+.+.+.
T Consensus       219 ~v--k~gavVIDvGin~~~gkl~GDvd~~~  246 (282)
T PRK14180        219 MV--KEGAVVIDVGINHVDGKIVGDVDFAA  246 (282)
T ss_pred             Hc--CCCcEEEEecccccCCceeCCcCHHH
Confidence            21  12267777887642223344555443

>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=95.83  E-value=0.039  Score=49.44  Aligned_cols=89  Identities=12%  Similarity=0.120  Sum_probs=56.7

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHH---HHHHHHHhhcCCceEEEEEEECCCCcHHHH-HHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK---DVSDSIQAKYAKTQIKSVVVDFSGDLDEGV-ERIK  125 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~  125 (255)
                      .+.||++.|.|- |.||+++|+.+...|++|+..++......   +...++.+.....++..+.+..+++.+..+ ++..
T Consensus       148 ~L~gktvGIiG~-G~IG~~vA~~~~~fGm~V~~~d~~~~~~~~~~~~~~~l~ell~~sDiVslh~Plt~~T~~li~~~~l  226 (409)
T PRK11790        148 EVRGKTLGIVGY-GHIGTQLSVLAESLGMRVYFYDIEDKLPLGNARQVGSLEELLAQSDVVSLHVPETPSTKNMIGAEEL  226 (409)
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCcccccCCceecCCHHHHHhhCCEEEEcCCCChHHhhccCHHHH
Confidence            477999999997 78999999999999999999998642110   011123333335678888887776433433 2333


Q ss_pred             HHhcCCCccEEEEecCC
Q 025260          126 EAIEGLDVGVLINNVGI  142 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~  142 (255)
                      +.++.   +.++-|.|.
T Consensus       227 ~~mk~---ga~lIN~aR  240 (409)
T PRK11790        227 ALMKP---GAILINASR  240 (409)
T ss_pred             hcCCC---CeEEEECCC
Confidence            33333   345555554

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.79  E-value=0.019  Score=42.66  Aligned_cols=87  Identities=20%  Similarity=0.245  Sum_probs=49.8

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEE-eCChhhHHHHHHHHHh--------hcCCceEEEEEEECCCC-cHHHHH
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQA--------KYAKTQIKSVVVDFSGD-LDEGVE  122 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~-~r~~~~~~~~~~~~~~--------~~~~~~~~~~~~d~~~~-~~~~~~  122 (255)
                      .-.+-|.|+ |-+|.++++.|.+.|++|..+ +|+....+++.+.+..        .-..  ...+-+.+.|+ +.+.++
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~--aDlv~iavpDdaI~~va~   86 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRD--ADLVFIAVPDDAIAEVAE   86 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC---SEEEE-S-CCHHHHHHH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccccccccc--CCEEEEEechHHHHHHHH
Confidence            356788888 889999999999999998776 5776665655544321        1122  33344445553 456666


Q ss_pred             HHHHH--hcCCCccEEEEecCCCC
Q 025260          123 RIKEA--IEGLDVGVLINNVGISY  144 (255)
Q Consensus       123 ~~~~~--~~~~~id~lv~nag~~~  144 (255)
                      ++.+.  .....  +++|+.|-..
T Consensus        87 ~La~~~~~~~g~--iVvHtSGa~~  108 (127)
T PF10727_consen   87 QLAQYGAWRPGQ--IVVHTSGALG  108 (127)
T ss_dssp             HHHCC--S-TT---EEEES-SS--
T ss_pred             HHHHhccCCCCc--EEEECCCCCh
Confidence            66554  22335  8999999753

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.79  E-value=0.061  Score=46.64  Aligned_cols=36  Identities=25%  Similarity=0.419  Sum_probs=32.3

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP   87 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~   87 (255)
                      .|++++|.|+++++|.+++..+...|++|+.++++.
T Consensus       177 ~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~  212 (350)
T cd08274         177 AGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA  212 (350)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch
Confidence            489999999999999999999999999998888654

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=95.78  E-value=0.091  Score=44.60  Aligned_cols=79  Identities=28%  Similarity=0.411  Sum_probs=51.6

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCc-EEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~-V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      +|..++|+| ++++|.++++.+.+.|++ |+++++++++.+ ..+++     +.. ..+  + . ...+..+.+.+..++
T Consensus       129 ~~~~vlI~g-~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~-~~~~~-----g~~-~~~--~-~-~~~~~~~~l~~~~~~  196 (312)
T cd08269         129 AGKTVAVIG-AGFIGLLFLQLAAAAGARRVIAIDRRPARLA-LAREL-----GAT-EVV--T-D-DSEAIVERVRELTGG  196 (312)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHH-HHHHh-----CCc-eEe--c-C-CCcCHHHHHHHHcCC
Confidence            478899996 689999999888899999 999988876554 22222     111 111  1 1 112344555555454


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                      .++|+++++.|.
T Consensus       197 ~~vd~vld~~g~  208 (312)
T cd08269         197 AGADVVIEAVGH  208 (312)
T ss_pred             CCCCEEEECCCC
Confidence            568899998763

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=95.76  E-value=0.26  Score=40.93  Aligned_cols=80  Identities=18%  Similarity=0.273  Sum_probs=58.5

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|.+|+|--|.||.|..+++.+-..|++++.+..+.++.+.+++.       ..-+.+++.-    ++.++++.+--.+.
T Consensus       146 pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~aken-------G~~h~I~y~~----eD~v~~V~kiTngK  214 (336)
T KOG1197|consen  146 PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKEN-------GAEHPIDYST----EDYVDEVKKITNGK  214 (336)
T ss_pred             CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhc-------CCcceeeccc----hhHHHHHHhccCCC
Confidence            489999999999999999999999999999999888877665442       2223334332    35666676665555


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      .+|++.-..|.
T Consensus       215 GVd~vyDsvG~  225 (336)
T KOG1197|consen  215 GVDAVYDSVGK  225 (336)
T ss_pred             Cceeeeccccc
Confidence            67787766553

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.75  E-value=0.066  Score=48.95  Aligned_cols=49  Identities=20%  Similarity=0.226  Sum_probs=37.3

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh-hHHHHHHHHHh
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD-KLKDVSDSIQA   99 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~-~~~~~~~~~~~   99 (255)
                      .++++.|+|.|+ |++|.++|+.|+++|++|.+.+++.. ......+.+++
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~   62 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEA   62 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHH
Confidence            356889999997 77999999999999999999986643 33333444544

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=95.74  E-value=0.033  Score=48.21  Aligned_cols=88  Identities=17%  Similarity=0.208  Sum_probs=57.8

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeC-ChhhHHH-----HHHHHHhhcCCceEEEEEEECCCCcHHHH-H
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKD-----VSDSIQAKYAKTQIKSVVVDFSGDLDEGV-E  122 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r-~~~~~~~-----~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~  122 (255)
                      .+.||++-|.|. |.||+++|+.+...|++|+..++ .......     ...++.+.-...++..+.+.++++-+..+ +
T Consensus       139 el~gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~sDiv~lh~PlT~eT~g~i~~  217 (324)
T COG0111         139 ELAGKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLAEADILTLHLPLTPETRGLINA  217 (324)
T ss_pred             cccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHhhCCEEEEcCCCCcchhcccCH
Confidence            467999999986 58999999999999999999999 3332221     01222332235688888888887654444 3


Q ss_pred             HHHHHhcCCCccEEEEec
Q 025260          123 RIKEAIEGLDVGVLINNV  140 (255)
Q Consensus       123 ~~~~~~~~~~id~lv~na  140 (255)
                      +..+.++..-  ++||+|
T Consensus       218 ~~~a~MK~ga--ilIN~a  233 (324)
T COG0111         218 EELAKMKPGA--ILINAA  233 (324)
T ss_pred             HHHhhCCCCe--EEEECC
Confidence            3334444323  555554

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=95.74  E-value=0.078  Score=45.69  Aligned_cols=41  Identities=20%  Similarity=0.324  Sum_probs=34.1

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHc-CCcEEEEeCChhhHHHH
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~-G~~V~l~~r~~~~~~~~   93 (255)
                      |.+++|+|+++++|.+++...... |++|+.+++++++.+.+
T Consensus       149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l  190 (336)
T TIGR02817       149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWV  190 (336)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHH
Confidence            789999999999999987666556 99999998887765544

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=95.74  E-value=0.11  Score=44.86  Aligned_cols=77  Identities=26%  Similarity=0.452  Sum_probs=51.1

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      +|++++|+| ++++|.+++..+..+|+ +|+.+++++++.... +++     +..  .  .+..+.  +..+++.+..++
T Consensus       167 ~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~-~~~-----g~~--~--~~~~~~--~~~~~l~~~~~~  233 (344)
T cd08284         167 PGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERA-AAL-----GAE--P--INFEDA--EPVERVREATEG  233 (344)
T ss_pred             cCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHH-HHh-----CCe--E--EecCCc--CHHHHHHHHhCC
Confidence            489999996 68999999999999997 788887776554332 222     221  1  232221  344556655555


Q ss_pred             CCccEEEEecC
Q 025260          131 LDVGVLINNVG  141 (255)
Q Consensus       131 ~~id~lv~nag  141 (255)
                      .++|+++++.|
T Consensus       234 ~~~dvvid~~~  244 (344)
T cd08284         234 RGADVVLEAVG  244 (344)
T ss_pred             CCCCEEEECCC
Confidence            56889998876

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=95.74  E-value=0.35  Score=42.89  Aligned_cols=115  Identities=17%  Similarity=0.198  Sum_probs=72.1

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCC-c----EEE----EeCChhhHHHHHHHHHhhc-CCceEEEEEEECCCCcHHHHHH
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGL-N----LVL----VGRNPDKLKDVSDSIQAKY-AKTQIKSVVVDFSGDLDEGVER  123 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~-~----V~l----~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~  123 (255)
                      -.|.|+|++|.+|.++|..++..|. .    |.+    .+++++.++....++.... +...    ...++..       
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~----~v~i~~~-------  113 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLR----EVSIGID-------  113 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcC----ceEEecC-------
Confidence            4699999999999999999998874 4    444    4889988888777776542 1111    1111111       


Q ss_pred             HHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhh-C-CCcEEEEECC
Q 025260          124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK-R-KKGAIVNIGS  193 (255)
Q Consensus       124 ~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~-~-~~g~iv~vsS  193 (255)
                      -.+.+.  |-|++|..||....   +  ..+..   +.++.|    ..+++...+.+.+ . +.+.++++|.
T Consensus       114 ~y~~~k--daDIVVitAG~prk---p--g~tR~---dll~~N----~~I~k~i~~~I~~~a~~~~iviVVsN  171 (387)
T TIGR01757       114 PYEVFE--DADWALLIGAKPRG---P--GMERA---DLLDIN----GQIFADQGKALNAVASKNCKVLVVGN  171 (387)
T ss_pred             CHHHhC--CCCEEEECCCCCCC---C--CCCHH---HHHHHH----HHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            134445  45599999997532   1  23332   234443    4556666666665 3 4677777774

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.73  E-value=0.094  Score=44.25  Aligned_cols=45  Identities=22%  Similarity=0.323  Sum_probs=37.8

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD   92 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~   92 (255)
                      .++++||.|+|.|.|.-+|+.++.-|.++|++|.++.+....+.+
T Consensus       153 ~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~  197 (278)
T PRK14172        153 NIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKE  197 (278)
T ss_pred             CCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence            356779999999999999999999999999999887655444444

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=95.72  E-value=0.091  Score=46.15  Aligned_cols=80  Identities=20%  Similarity=0.161  Sum_probs=50.5

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++++|.| ++++|...+......|+ +|+.+++++++.+.+ +++     +.+ .++  |..+...+..+.+.+..+ 
T Consensus       184 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~-~~~-----ga~-~~i--~~~~~~~~~~~~~~~~~~-  252 (365)
T cd08277         184 PGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFEKA-KEF-----GAT-DFI--NPKDSDKPVSEVIREMTG-  252 (365)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc-----CCC-cEe--ccccccchHHHHHHHHhC-
Confidence            489999997 49999999888888999 699999987776544 222     221 111  111110122334444444 


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                      ..+|+++.+.|.
T Consensus       253 ~g~d~vid~~g~  264 (365)
T cd08277         253 GGVDYSFECTGN  264 (365)
T ss_pred             CCCCEEEECCCC
Confidence            357799988873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=95.72  E-value=0.071  Score=45.57  Aligned_cols=41  Identities=29%  Similarity=0.368  Sum_probs=35.7

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~   93 (255)
                      +.+++|.|+++++|.+++......|++|+++++++++.+..
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (325)
T cd05280         147 DGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYL  187 (325)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            56899999999999999988888999999999988765544

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08251 polyketide_synthase polyketide synthase

Probab=95.70  E-value=0.11  Score=43.73  Aligned_cols=79  Identities=20%  Similarity=0.285  Sum_probs=52.5

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|.+++|.|+++++|.+++......|++|+.++++.++.+.. +++     +.+ ..  .|..+  .+..+.+.+..++.
T Consensus       120 ~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-----g~~-~~--~~~~~--~~~~~~i~~~~~~~  188 (303)
T cd08251         120 KGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYL-KQL-----GVP-HV--INYVE--EDFEEEIMRLTGGR  188 (303)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc-----CCC-EE--EeCCC--ccHHHHHHHHcCCC
Confidence            478999999999999999998889999999998887665544 222     111 11  12221  13334455544544


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      .+|+++.+.+
T Consensus       189 ~~d~v~~~~~  198 (303)
T cd08251         189 GVDVVINTLS  198 (303)
T ss_pred             CceEEEECCc
Confidence            6778887664

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=95.69  E-value=0.26  Score=42.68  Aligned_cols=114  Identities=21%  Similarity=0.223  Sum_probs=69.1

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCC-------cEEEEeCCh--hhHHHHHHHHHhhc-CCceEEEEEEECCCCcHHHHHHH
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGL-------NLVLVGRNP--DKLKDVSDSIQAKY-AKTQIKSVVVDFSGDLDEGVERI  124 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~-------~V~l~~r~~--~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~  124 (255)
                      .+.|+|++|.+|.++|..|...|.       ++++.|.++  ++++....++.... +...    ...+.       ..-
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~----~~~i~-------~~~   73 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLA----GVVAT-------TDP   73 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccC----CcEEe-------cCh
Confidence            488999999999999999998884       699999965  43555555555332 1100    00111       112


Q ss_pred             HHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC--CcEEEEECC
Q 025260          125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK--KGAIVNIGS  193 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~--~g~iv~vsS  193 (255)
                      .+.+.  +-|++|..||....   +  .++..   +.++.|    ..+++.+.+.+.+..  ++.++++|.
T Consensus        74 ~~~~~--daDvVVitAG~~~k---~--g~tR~---dll~~N----a~i~~~i~~~i~~~~~~~~iiivvsN  130 (323)
T TIGR01759        74 EEAFK--DVDAALLVGAFPRK---P--GMERA---DLLSKN----GKIFKEQGKALNKVAKKDVKVLVVGN  130 (323)
T ss_pred             HHHhC--CCCEEEEeCCCCCC---C--CCcHH---HHHHHH----HHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence            34445  34599999997532   1  23433   334444    455566666666553  577777764

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=95.69  E-value=0.078  Score=46.11  Aligned_cols=78  Identities=15%  Similarity=0.256  Sum_probs=49.5

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCc-EEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~-V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++++|+| ++++|...+..+...|++ |+.+++++++.+.+ +++     +.. ..+  |..+.  . .+++.+..++
T Consensus       160 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~-----Ga~-~~i--~~~~~--~-~~~~~~~~~~  226 (347)
T PRK10309        160 EGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALA-KSL-----GAM-QTF--NSREM--S-APQIQSVLRE  226 (347)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc-----CCc-eEe--cCccc--C-HHHHHHHhcC
Confidence            488999997 599999999888889997 67888888776543 222     221 122  22211  1 2344444444


Q ss_pred             CCcc-EEEEecCC
Q 025260          131 LDVG-VLINNVGI  142 (255)
Q Consensus       131 ~~id-~lv~nag~  142 (255)
                      ..+| +++.++|.
T Consensus       227 ~~~d~~v~d~~G~  239 (347)
T PRK10309        227 LRFDQLILETAGV  239 (347)
T ss_pred             CCCCeEEEECCCC
Confidence            4566 77777774

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	255
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		2e-15
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		8e-14
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		9e-14
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		1e-13
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		3e-13
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		4e-13
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		1e-12
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		3e-12
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		4e-12
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		8e-12
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		1e-11
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		2e-11
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		2e-11
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		2e-11
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		3e-11
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		3e-11
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		4e-11
4bb5_A	292	Free-Wilson And Structural Approaches To Co-Optimis		4e-11
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		4e-11
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		4e-11
4bb6_A	292	Free-Wilson And Structural Approaches To Co-Optimis		4e-11
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		4e-11
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		5e-11
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		5e-11
2ilt_A	275	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		7e-11
2irw_A	264	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		7e-11
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		8e-11
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		8e-11
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		8e-11
3d5q_A	272	Crystal Structure Of 11b-Hsd1 In Complex With Triaz		8e-11
3pdj_A	273	Crystal Structure Of Human 11-Beta-Hydroxysteroid D		8e-11
1xu7_A	286	Crystal Structure Of The Interface Open Conformatio		9e-11
2bel_A	283	Structure Of Human 11-Beta-Hydroxysteroid Dehydroge		9e-11
2rbe_A	275	The Discovery Of 2-Anilinothiazolones As 11beta-Hsd		9e-11
4hfr_A	272	Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In		9e-11
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		9e-11
3ch6_A	286	Crystal Structure Of 11beta-Hsd1 Double Mutant (L26		2e-10
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		2e-10
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		2e-10
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-10
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		4e-10
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		4e-10
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-10
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		5e-10
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		5e-10
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		6e-10
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		6e-10
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		6e-10
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		7e-10
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		7e-10
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		9e-10
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		1e-09
3lz6_A	263	Guinea Pig 11beta Hydroxysteroid Dehydrogenase With		1e-09
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		2e-09
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		2e-09
1xse_A	295	Crystal Structure Of Guinea Pig 11beta-Hydroxystero		2e-09
3g49_A	277	N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-		2e-09
3dwf_A	276	Crystal Structure Of The Guinea Pig 11beta-Hydroxys		2e-09
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		2e-09
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		2e-09
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		3e-09
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		3e-09
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		3e-09
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		4e-09
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		5e-09
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		5e-09
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		6e-09
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		8e-09
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		9e-09
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-08
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		1e-08
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		1e-08
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		1e-08
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		2e-08
1y5m_A	276	The Crystal Structure Of Murine 11b-Hydroxysteroid		2e-08
3gmd_A	264	Structure-Based Design Of 7-Azaindole-Pyrrolidines		2e-08
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		2e-08
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		3e-08
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		3e-08
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		3e-08
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		4e-08
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		6e-08
4imr_A	275	Crystal Structure Of 3-oxoacyl (acyl-carrier-protei		9e-08
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-07
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		1e-07
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		1e-07
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		1e-07
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		1e-07
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		2e-07
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		2e-07
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		3e-07
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		5e-07
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		5e-07
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		5e-07
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		5e-07
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		5e-07
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		6e-07
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		7e-07
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		7e-07
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		8e-07
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		1e-06
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		1e-06
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		2e-06
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		2e-06
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		3e-06
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		3e-06
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		3e-06
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		3e-06
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		3e-06
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		4e-06
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		4e-06
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		4e-06
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		4e-06
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		6e-06
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		7e-06
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		8e-06
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		9e-06
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		9e-06
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		1e-05
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		1e-05
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		1e-05
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		1e-05
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		2e-05
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		3e-05
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		3e-05
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		3e-05
3e9q_A	273	Crystal Structure Of The Short Chain Dehydrogenase		3e-05
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		3e-05
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		4e-05
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		4e-05
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		4e-05
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		5e-05
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		5e-05
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		6e-05
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		7e-05
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		7e-05
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		7e-05
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		8e-05
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		8e-05
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		9e-05
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		1e-04
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		1e-04
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		1e-04
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		1e-04
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		1e-04
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		1e-04
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		2e-04
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		2e-04
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		2e-04
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		2e-04
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		3e-04
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		3e-04
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		3e-04
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		4e-04
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		4e-04
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		4e-04
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		5e-04
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-04
1a27_A	289	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C		6e-04
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		6e-04
1iol_A	327	Estrogenic 17-beta Hydroxysteroid Dehydrogenase Com		6e-04
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		8e-04
1fdu_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M		9e-04
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		9e-04
1fdw_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M		9e-04
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		9e-04

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 91/170 (53%), Gaps = 8/170 (4%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG T GIGK+ A  L   G N+++ GR  + + +    I+A+Y    ++ VV D
Sbjct: 10  GKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVAD 69
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
                ++G + + E    +D  +LINN+GI  P   +F   D+   K L +VN+    ++
Sbjct: 70  LG--TEQGCQDVIEKYPKVD--ILINNLGIFEP-VEYFDIPDEDWFK-LFEVNIXSGVRL 123
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSL 222
           T++ L   ++RK+G ++ I S AAI    +  +  Y+ATK      SRSL
Sbjct: 124 TRSYLKKXIERKEGRVIFIASEAAIXPSQEXAH--YSATKTXQLSLSRSL 171

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 73.9 bits (180), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 13/187 (6%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  A++TG + GIG + A   AK G ++VLV R  D+L + + S++ K+   ++  V VD
Sbjct: 7   GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG-VRVLEVAVD 65
Query: 113 FSG--DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
            +    +D  VE ++ +  G D  +L+NN G          E      +   +++V    
Sbjct: 66  VATPEGVDAVVESVRSSFGGAD--ILVNNAGTGSN--ETIMEAADEKWQFYWELHVMAAV 121
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY--SVYAATKAYIDQFSRSLYVEYRK 228
           ++ + ++PGM  R  GAI++  S  A+     PL+   +Y  TKA +  FS++L  E  K
Sbjct: 122 RLARGLVPGMRARGGGAIIHNASICAV----QPLWYEPIYNVTKAALMMFSKTLATEVIK 177
Query: 229 SGIDVQC 235
             I V C
Sbjct: 178 DNIRVNC 184

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 73.6 bits (179), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 97/177 (54%), Gaps = 13/177 (7%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  +LVTG T GIG++ A +LA  G  +++ G + ++ K V++ I  KY    +K+  V+
Sbjct: 7   GKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYG---VKAHGVE 63
Query: 113 FS----GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
            +      +++  E I   ++G+D  +L+NN GI+    + F  +  +  + ++KVN+ G
Sbjct: 64  MNLLSEESINKAFEEIYNLVDGID--ILVNNAGITRD--KLFLRMSLLDWEEVLKVNLTG 119
Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
           T  VTQ  L  M+K++ G IVNI S   +    +     Y+ TKA +  F++SL  E
Sbjct: 120 TFLVTQNSLRKMIKQRWGRIVNISS--VVGFTGNVGQVNYSTTKAGLIGFTKSLAKE 174

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 102/185 (55%), Gaps = 11/185 (5%)
Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI-QAKYAKTQIKSVVVDFSG 115
           ++TG ++GIG++ A   A+ G N+ + GR+ ++L++    I ++  ++ Q+ SVV D + 
Sbjct: 10  IITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT- 68
Query: 116 DLDEGVERIKEAI--EGLDVGVLINNVGISYPYARFFHEVDQV--LLKNLIKVNVEGTTK 171
             ++G ++I  +   +   + VL+NN G + P A      DQ   +    +K+N++   +
Sbjct: 69  -TEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIE 127
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIP-SDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
           +T+ V P ++   KG IVN+ S   +  P + P +  YA  KA +DQ++RS  ++  K G
Sbjct: 128 MTKKVKPHLVA-SKGEIVNVSS--IVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFG 184
Query: 231 IDVQC 235
           I V  
Sbjct: 185 IRVNS 189

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 13/187 (6%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  A++TG + GIG + A   AK G ++VLV R  D+L + + S++ K+   ++  V VD
Sbjct: 7   GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG-VRVLEVAVD 65
Query: 113 FSG--DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
            +    +D  VE ++ +  G D  +L+NN G          E      +   ++ V    
Sbjct: 66  VATPEGVDAVVESVRSSFGGAD--ILVNNAGTGSN--ETIMEAADEKWQFYWELLVMAAV 121
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY--SVYAATKAYIDQFSRSLYVEYRK 228
           ++ + ++PGM  R  GAI++  S  A+     PL+   +Y  TKA +  FS++L  E  K
Sbjct: 122 RLARGLVPGMRARGGGAIIHNASICAV----QPLWYEPIYNVTKAALMMFSKTLATEVIK 177
Query: 229 SGIDVQC 235
             I V C
Sbjct: 178 DNIRVNC 184

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 90/179 (50%), Gaps = 12/179 (6%)
Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           LVTG T G G+    +  + G  ++  GR  ++L+++ D +       Q+    V     
Sbjct: 4   LVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLD---VRNRAA 60
Query: 117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAV 176
           ++E +  +    E  ++ +L+NN G++       H+      + +I  N +G   +T+AV
Sbjct: 61  IEEMLASLP--AEWCNIDILVNNAGLALGM-EPAHKASVEDWETMIDTNNKGLVYMTRAV 117
Query: 177 LPGMLKRKKGAIVNIGSGAAIVIPSDPLY--SVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           LPGM++R  G I+NIGS A     S P    +VY ATKA++ QFS +L  +   + + V
Sbjct: 118 LPGMVERNHGHIINIGSTAG----SWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRV 172

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 7/187 (3%)
Query: 49  LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKS 108
            R  G+ A VTG   GIG       A +G  L+L+ R    L   +  + A  A      
Sbjct: 7   FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAA----R 62
Query: 109 VVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
           +V D + D +       EA     V +L+N+ GI+  +     E D    + ++ VNV+G
Sbjct: 63  IVADVT-DAEAMTAAAAEAEAVAPVSILVNSAGIARLHDAL--ETDDATWRQVMAVNVDG 119
Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
               ++A    M+ R  GAIVN+GS +  ++      S Y A+K  + Q +R+L  E+  
Sbjct: 120 MFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAG 179
Query: 229 SGIDVQC 235
            G+ V  
Sbjct: 180 RGVRVNA 186

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 21/197 (10%)
Query: 45  PAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKT 104
           P    +  G  ALVTG T GIG++ A      G  + L G   DKLK+++  +       
Sbjct: 19  PGSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLG------ 72
Query: 105 QIKSVVVDFSGDLDEG------VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLL 158
             K V V FS +L +        E  +  +EG+D  +L+NN GI+     F    DQ   
Sbjct: 73  --KDVFV-FSANLSDRKSIKQLAEVAEREMEGID--ILVNNAGITRD-GLFVRMQDQD-W 125
Query: 159 KNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQF 218
            +++ VN+   + +T+ ++  M++R+ G I+NI S   +V   +P  + Y A KA +  F
Sbjct: 126 DDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVV--GNPGQTNYCAAKAGLIGF 183
Query: 219 SRSLYVEYRKSGIDVQC 235
           S++L  E     I V C
Sbjct: 184 SKALAQEIASRNITVNC 200

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 91/183 (49%), Gaps = 11/183 (6%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKT-QIKSVVVDF 113
           ALVTG + GIG+S A QLA+ G N+ +    + +K + V + I+AK   +  I++ V   
Sbjct: 13  ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA-- 70
Query: 114 SGDLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
             D DE    IKE +     + VL+NN GI+         + +    ++I  N++G    
Sbjct: 71  --DADEVKAMIKEVVSQFGSLDVLVNNAGITRD--NLLMRMKEQEWDDVIDTNLKGVFNC 126
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
            Q   P ML+++ GAI+N+ S    V   +P  + Y ATKA +   ++S   E    GI 
Sbjct: 127 IQKATPQMLRQRSGAIINLSSVVGAV--GNPGQANYVATKAGVIGLTKSAARELASRGIT 184
Query: 233 VQC 235
           V  
Sbjct: 185 VNA 187

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 95/185 (51%), Gaps = 13/185 (7%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI-QAKYAKTQIKSVVVDFS 114
           A++TG ++GIG++ A   A+ G  + + GR+ ++L++    I  A  ++  + SVV D +
Sbjct: 9   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 68
Query: 115 GDLDEGVERIKEAIEG----LDVGVLINNVGISYPYARFFHEVDQVL--LKNLIKVNVEG 168
              D G + I     G    LD  +L+NN G + P ++      Q +      + +N+  
Sbjct: 69  --TDAGQDEILSTTLGKFGKLD--ILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRS 124
Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
              +T+  +P  L   KG IVNI S A+  + + P +  Y+  KA IDQ++R+  ++  +
Sbjct: 125 VIALTKKAVP-HLSSTKGEIVNISSIAS-GLHATPDFPYYSIAKAAIDQYTRNTAIDLIQ 182
Query: 229 SGIDV 233
            GI V
Sbjct: 183 HGIRV 187

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 20/192 (10%)
Query: 57  LVTGPTDGIGKSFAFQL--AKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF 113
           L+TG + GIGK+ A +   A  G + L+L  R  +KL+++  +I  ++   ++    +D 
Sbjct: 37  LITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDI 96
Query: 114 SGDLDEGVERIKEAIEGL-----DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
           +       E+IK  IE L     D+ +L+NN G +    R   ++    ++++   NV  
Sbjct: 97  TQ-----AEKIKPFIENLPQEFKDIDILVNNAGKALGSDRV-GQIATEDIQDVFDTNVTA 150
Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
              +TQAVLP    +  G IVN+GS A     + P  S+Y A+K  +  F+ SL    RK
Sbjct: 151 LINITQAVLPIFQAKNSGDIVNLGSIAG--RDAYPTGSIYCASKFAVGAFTDSL----RK 204
Query: 229 SGIDVQCQVLFL 240
             I+ + +V+ +
Sbjct: 205 ELINTKIRVILI 216

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 19/181 (10%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G   LVTG + GIG + A Q A+ G  +V +G +       +D + A     +I+   +D
Sbjct: 11  GQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLD-------ADGVHAPR-HPRIRREELD 62
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
            +    + ++R+ EA+  LD  VL+NN GIS    R   E D    + ++++N+      
Sbjct: 63  ITD--SQRLQRLFEALPRLD--VLVNNAGIS----RDREEYDLATFERVLRLNLSAAMLA 114
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
           +Q   P +L ++ G+I+NI S  +    +D     Y+A+K  I Q +RSL  EY    I 
Sbjct: 115 SQLARP-LLAQRGGSILNIASMYSTFGSAD--RPAYSASKGAIVQLTRSLACEYAAERIR 171
Query: 233 V 233
           V
Sbjct: 172 V 172

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 13/203 (6%)
Query: 38  VYVNFLRPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI 97
           +Y     P +     G   L+TG   GIG+  A++ AK    LVL   N   L++ +   
Sbjct: 16  LYFQGHMPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKC 75
Query: 98  QAKYAKTQIKSVVVDFSG--DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQ 155
           +   AK  + + VVD S   D+    +++K  I   DV +L+NN G+ Y    F  +  Q
Sbjct: 76  KGLGAK--VHTFVVDCSNREDIYSSAKKVKAEIG--DVSILVNNAGVVYTSDLFATQDPQ 131
Query: 156 VLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYI 215
           +  +   +VNV      T+A LP M K   G IV + S A  V  S P    Y ++K   
Sbjct: 132 I--EKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV--SVPFLLAYCSSKFAA 187
Query: 216 DQFSRSLYVEYRK---SGIDVQC 235
             F ++L  E      +G+   C
Sbjct: 188 VGFHKTLTDELAALQITGVKTTC 210

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 20/192 (10%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKT-QIKSVVV 111
           G  A+VTG   GIGK+   +L + G N+V+  R  ++LK  +D +QA    T Q + + +
Sbjct: 18  GQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPI 77
Query: 112 DFSGDLDEGVER-IKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKN---LIKVNV 166
             +   +E V   +K  ++    +  L+NN G      +F    + +  K    +++ N+
Sbjct: 78  QCNIRNEEEVNNLVKSTLDTFGKINFLVNNGG-----GQFLSPAEHISSKGWHAVLETNL 132
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD---PLYSVYAATKAYIDQFSRSLY 223
            GT  + +AV    +K   G+IVN      I++P+    PL     A +A +   ++SL 
Sbjct: 133 TGTFYMCKAVYSSWMKEHGGSIVN------IIVPTKAGFPLAVHSGAARAGVYNLTKSLA 186
Query: 224 VEYRKSGIDVQC 235
           +E+  SGI + C
Sbjct: 187 LEWACSGIRINC 198

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 8/179 (4%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKT--QIKSVVVDF 113
           A+VTG + G G + A +    G  +  +  + + L++ + +    YA    ++++ V D 
Sbjct: 5   AIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVAD- 63
Query: 114 SGDLDEGVERIKEAIEGLDVGVLINNVGIS-YPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
            GD++  +    E    +DV  L+NN GI+    A   H         ++ VNV G    
Sbjct: 64  EGDVNAAIAATMEQFGAIDV--LVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLG 121
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
            +AVLP ML +  G IVNI S A++V  + P  S Y  +K  + Q ++S+ V+Y  SGI
Sbjct: 122 CRAVLPHMLLQGAGVIVNIASVASLV--AFPGRSAYTTSKGAVLQLTKSVAVDYAGSGI 178

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 92/182 (50%), Gaps = 12/182 (6%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVTG T GIG   A +L K GL + +  R  + L+     ++    +   ++  V    
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
           +++  V  + E    +D  VL+NN G   P      E+   L  ++++ N+ G  +VT+ 
Sbjct: 89  EIEALVAAVVERYGPVD--VLVNNAG--RPGGGATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 176 VLP--GMLKRKKGAIVNIGS--GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           VL   GML+R  G IVNI S  G   V+ + P    Y+A+K  +  F+++L +E  ++GI
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAP----YSASKHGVVGFTKALGLELARTGI 200
Query: 232 DV 233
            V
Sbjct: 201 TV 202

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 92/182 (50%), Gaps = 12/182 (6%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVTG T GIG   A +L K GL + +  R  + L+     ++    +   ++  V    
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
           +++  V  + E    +D  VL+NN G   P      E+   L  ++++ N+ G  +VT+ 
Sbjct: 89  EIEALVAAVVERYGPVD--VLVNNAG--RPGGGATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 176 VLP--GMLKRKKGAIVNIGS--GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           VL   GML+R  G IVNI S  G   V+ + P    Y+A+K  +  F+++L +E  ++GI
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAP----YSASKHGVVGFTKALGLELARTGI 200
Query: 232 DV 233
            V
Sbjct: 201 TV 202

>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 100/199 (50%), Gaps = 16/199 (8%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL-KDVSDSIQAKYAKTQIKSVVV 111
           G   +VTG + GIG+  A+ LAK G ++V+  R+ + L K VS  ++   A     +  +
Sbjct: 34  GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTM 93
Query: 112 DFSGDLDEGVERIKEAIEGLDVGVL--INNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
           +     ++ V +  + + GLD+ +L  I N  ++      FH+ D   ++  ++VN    
Sbjct: 94  EDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLN-----LFHD-DIHHVRKSMEVNFLSY 147
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
             +T A LP MLK+  G+IV + S A  V  + PL + Y+A+K  +D F  S+  EY  S
Sbjct: 148 VVLTVAALP-MLKQSNGSIVVVSSLAGKV--AYPLVAAYSASKFALDGFFSSIRKEYSVS 204
Query: 230 GIDVQCQVLFLLCFYNLND 248
            ++V       LC   L D
Sbjct: 205 RVNVSIT----LCVLGLID 219

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 92/182 (50%), Gaps = 12/182 (6%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVTG T GIG   A +L K GL + +  R  + L+     ++    +   ++  V    
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
           +++  V  + E    +D  VL+NN G   P      E+   L  ++++ N+ G  +VT+ 
Sbjct: 89  EIEALVAAVVERYGPVD--VLVNNAG--RPGGGATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 176 VLP--GMLKRKKGAIVNIGS--GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           VL   GML+R  G IVNI S  G   V+ + P    Y+A+K  +  F+++L +E  ++GI
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAP----YSASKHGVVGFTKALGLELARTGI 200
Query: 232 DV 233
            V
Sbjct: 201 TV 202

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 92/182 (50%), Gaps = 12/182 (6%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVTG T GIG   A +L K GL + +  R  + L+     ++    +   ++  V    
Sbjct: 25  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 84
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
           +++  V  + E    +D  VL+NN G   P      E+   L  ++++ N+ G  +VT+ 
Sbjct: 85  EIEALVAAVVERYGPVD--VLVNNAG--RPGGGATAELADELWLDVVETNLTGVFRVTKQ 140
Query: 176 VLP--GMLKRKKGAIVNIGS--GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           VL   GML+R  G IVNI S  G   V+ + P    Y+A+K  +  F+++L +E  ++GI
Sbjct: 141 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAP----YSASKHGVVGFTKALGLELARTGI 196
Query: 232 DV 233
            V
Sbjct: 197 TV 198

>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 100/199 (50%), Gaps = 16/199 (8%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL-KDVSDSIQAKYAKTQIKSVVV 111
           G   +VTG + GIG+  A+ LAK G ++V+  R+ + L K VS  ++   A     +  +
Sbjct: 34  GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTM 93
Query: 112 DFSGDLDEGVERIKEAIEGLDVGVL--INNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
           +     ++ V +  + + GLD+ +L  I N  ++      FH+ D   ++  ++VN    
Sbjct: 94  EDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLN-----LFHD-DIHHVRKSMEVNFLSY 147
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
             +T A LP MLK+  G+IV + S A  V  + PL + Y+A+K  +D F  S+  EY  S
Sbjct: 148 VVLTVAALP-MLKQSNGSIVVVSSLAGKV--AYPLVAAYSASKFALDGFFSSIRKEYSVS 204
Query: 230 GIDVQCQVLFLLCFYNLND 248
            ++V       LC   L D
Sbjct: 205 RVNVSIT----LCVLGLID 219

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 92/182 (50%), Gaps = 12/182 (6%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVTG T GIG   A +L K GL + +  R  + L+     ++    +   ++  V    
Sbjct: 9   ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 68
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
           +++  V  + E    +D  VL+NN G   P      E+   L  ++++ N+ G  +VT+ 
Sbjct: 69  EIEALVAAVVERYGPVD--VLVNNAG--RPGGGATAELADELWLDVVETNLTGVFRVTKQ 124
Query: 176 VLP--GMLKRKKGAIVNIGS--GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           VL   GML+R  G IVNI S  G   V+ + P    Y+A+K  +  F+++L +E  ++GI
Sbjct: 125 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAP----YSASKHGVVGFTKALGLELARTGI 180
Query: 232 DV 233
            V
Sbjct: 181 TV 182

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 11/183 (6%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKT-QIKSVVVDF 113
           ALVTG + GIG+S A QLA+ G N+ +    + +K + V + I+AK   +  I++ V   
Sbjct: 7   ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA-- 64
Query: 114 SGDLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
             D DE    IKE +     + VL+NN GI+           +    ++I  N++G    
Sbjct: 65  --DADEVKAXIKEVVSQFGSLDVLVNNAGITRD--NLLXRXKEQEWDDVIDTNLKGVFNC 120
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
            Q   P  L+++ GAI+N+ S    V   +P  + Y ATKA +   ++S   E    GI 
Sbjct: 121 IQKATPQXLRQRSGAIINLSSVVGAV--GNPGQANYVATKAGVIGLTKSAARELASRGIT 178
Query: 233 VQC 235
           V  
Sbjct: 179 VNA 181

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 9/194 (4%)
Query: 44  RPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI-QAKYA 102
           R +   R  G   ++TG ++GIG+S A   AK G  + + GRN D+L++    I +A   
Sbjct: 17  RGSHMARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVP 76
Query: 103 KTQIKSVVVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKN 160
             +I +VV D +     D+ +         +D  +L+NN G +        +    L + 
Sbjct: 77  AEKINAVVADVTEASGQDDIINTTLAKFGKID--ILVNNAGANLADGTANTDQPVELYQK 134
Query: 161 LIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP-SDPLYSVYAATKAYIDQFS 219
             K+N +   ++TQ     ++K  KG IVN+ S   +  P +   Y  YA  KA +DQ++
Sbjct: 135 TFKLNFQAVIEMTQKTKEHLIK-TKGEIVNVSS--IVAGPQAHSGYPYYACAKAALDQYT 191
Query: 220 RSLYVEYRKSGIDV 233
           R   ++  + G+ V
Sbjct: 192 RCTAIDLIQHGVRV 205

>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275

Iteration: 1
 Score = 63.9 bits (154), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 16/199 (8%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL-KDVSDSIQAKYAKTQIKSVVV 111
           G   +VTG + GIG+  A+ LAK G ++V+  R+ + L K VS  ++   A     +  +
Sbjct: 24  GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTM 83
Query: 112 DFSGDLDEGVERIKEAIEGLDVGVL--INNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
           +     ++ V +  + + GLD+ +L  I N  ++      FH+ D   ++  ++VN    
Sbjct: 84  EDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLN-----LFHD-DIHHVRKSMEVNFLSY 137
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
             +T A LP MLK+  G+IV + S A  V  + P+ + Y+A+K  +D F  S+  EY  S
Sbjct: 138 VVLTVAALP-MLKQSNGSIVVVSSLAGKV--AYPMVAAYSASKFALDGFFSSIRKEYSVS 194
Query: 230 GIDVQCQVLFLLCFYNLND 248
            ++V       LC   L D
Sbjct: 195 RVNVS----ITLCVLGLID 209

>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264

Iteration: 1
 Score = 63.9 bits (154), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 16/199 (8%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL-KDVSDSIQAKYAKTQIKSVVV 111
           G   +VTG + GIG+  A+ LAK G ++V+  R+ + L K VS  ++   A     +  +
Sbjct: 9   GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTM 68
Query: 112 DFSGDLDEGVERIKEAIEGLDVGVL--INNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
           +     ++ V +  + + GLD+ +L  I N  ++      FH+ D   ++  ++VN    
Sbjct: 69  EDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLN-----LFHD-DIHHVRKSMEVNFLSY 122
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
             +T A LP MLK+  G+IV + S A  V  + P+ + Y+A+K  +D F  S+  EY  S
Sbjct: 123 VVLTVAALP-MLKQSNGSIVVVSSLAGKV--AYPMVAAYSASKFALDGFFSSIRKEYSVS 179
Query: 230 GIDVQCQVLFLLCFYNLND 248
            ++V       LC   L D
Sbjct: 180 RVNVS----ITLCVLGLID 194

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 12/182 (6%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVTG T GIG   A +L K GL + +  R  + L+     ++    +   ++  V    
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
           +++  V  + E    +D  VL+NN G   P      E+   L  ++++ N+ G  +VT+ 
Sbjct: 89  EIEALVAAVVERYGPVD--VLVNNAG--RPGGGATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 176 VLP--GMLKRKKGAIVNIGS--GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           VL   GML+R  G IVNI S  G   ++ + P    Y+A+K  +  F+++L +E  ++GI
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGLVHAAP----YSASKHGVVGFTKALGLELARTGI 200
Query: 232 DV 233
            V
Sbjct: 201 TV 202

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 95/187 (50%), Gaps = 17/187 (9%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG + GIGK+ A  LA+ G  ++    +    + +SD     Y     K + ++
Sbjct: 12  GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISD-----YLGDNGKGMALN 66
Query: 113 FSGDLDEGVERIKEAIE----GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
            +    E +E + +AI     G+D+  L+NN GI+         + +    ++++ N+  
Sbjct: 67  VTNP--ESIEAVLKAITDEFGGVDI--LVNNAGITRD--NLLMRMKEEEWSDIMETNLTS 120
Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
             ++++AVL GM+K+++G I+N+GS   +    +   + YAA KA +  F++S+  E   
Sbjct: 121 IFRLSKAVLRGMMKKRQGRIINVGS--VVGTMGNAGQANYAAAKAGVIGFTKSMAREVAS 178
Query: 229 SGIDVQC 235
            G+ V  
Sbjct: 179 RGVTVNT 185

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 13/185 (7%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG + GIGK+ A  LA+ G  ++    +    + +SD     Y     K + ++
Sbjct: 12  GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISD-----YLGDNGKGMALN 66
Query: 113 FSGDLDEGVERIKEAI--EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
            +    E +E + +AI  E   V +L+NN GI+         + +    ++++ N+    
Sbjct: 67  VTNP--ESIEAVLKAITDEFGGVDILVNNAGITRD--NLLMRMKEEEWSDIMETNLTSIF 122
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
           ++++AVL GM+K+++G I+N+GS   +    +   + YAA KA +  F++S+  E    G
Sbjct: 123 RLSKAVLRGMMKKRQGRIINVGS--VVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRG 180
Query: 231 IDVQC 235
           + V  
Sbjct: 181 VTVNT 185

>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 16/199 (8%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL-KDVSDSIQAKYAKTQIKSVVV 111
           G   +VTG + GIG+  A+ LAK G ++V+  R+ + L K VS  ++   A     +  +
Sbjct: 14  GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTM 73
Query: 112 DFSGDLDEGVERIKEAIEGLDVGVL--INNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
           +     ++ V +  + + GLD+ +L  I N  ++      FH+ D   ++  ++VN    
Sbjct: 74  EDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLN-----LFHD-DIHHVRKSMEVNFLSY 127
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
             +T A LP MLK+  G+IV + S A  V  + P+ + Y+A+K  +D F  S+  EY  S
Sbjct: 128 VVLTVAALP-MLKQSNGSIVVVSSLAGKV--AYPMVAAYSASKFALDGFFSSIRKEYSVS 184
Query: 230 GIDVQCQVLFLLCFYNLND 248
            ++V       LC   L D
Sbjct: 185 RVNVS----ITLCVLGLID 199

>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 16/199 (8%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL-KDVSDSIQAKYAKTQIKSVVV 111
           G   +VTG + GIG+  A+ LAK G ++V+  R+ + L K VS  ++   A     +  +
Sbjct: 15  GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTM 74
Query: 112 DFSGDLDEGVERIKEAIEGLDVGVL--INNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
           +     ++ V +  + + GLD+ +L  I N  ++      FH+ D   ++  ++VN    
Sbjct: 75  EDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLN-----LFHD-DIHHVRKSMEVNFLSY 128
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
             +T A LP MLK+  G+IV + S A  V  + P+ + Y+A+K  +D F  S+  EY  S
Sbjct: 129 VVLTVAALP-MLKQSNGSIVVVSSLAGKV--AYPMVAAYSASKFALDGFFSSIRKEYSVS 185
Query: 230 GIDVQCQVLFLLCFYNLND 248
            ++V       LC   L D
Sbjct: 186 RVNVS----ITLCVLGLID 200

>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 16/199 (8%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL-KDVSDSIQAKYAKTQIKSVVV 111
           G   +VTG + GIG+  A+ LAK G ++V+  R+ + L K VS  ++   A     +  +
Sbjct: 28  GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTM 87
Query: 112 DFSGDLDEGVERIKEAIEGLDVGVL--INNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
           +     ++ V +  + + GLD+ +L  I N  ++      FH+ D   ++  ++VN    
Sbjct: 88  EDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLN-----LFHD-DIHHVRKSMEVNFLSY 141
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
             +T A LP MLK+  G+IV + S A  V  + P+ + Y+A+K  +D F  S+  EY  S
Sbjct: 142 VVLTVAALP-MLKQSNGSIVVVSSLAGKV--AYPMVAAYSASKFALDGFFSSIRKEYSVS 198
Query: 230 GIDVQCQVLFLLCFYNLND 248
            ++V       LC   L D
Sbjct: 199 RVNVS----ITLCVLGLID 213

>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 16/199 (8%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL-KDVSDSIQAKYAKTQIKSVVV 111
           G   +VTG + GIG+  A+ LAK G ++V+  R+ + L K VS  ++   A     +  +
Sbjct: 31  GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTM 90
Query: 112 DFSGDLDEGVERIKEAIEGLDVGVL--INNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
           +     ++ V +  + + GLD+ +L  I N  ++      FH+ D   ++  ++VN    
Sbjct: 91  EDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLN-----LFHD-DIHHVRKSMEVNFLSY 144
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
             +T A LP MLK+  G+IV + S A  V  + P+ + Y+A+K  +D F  S+  EY  S
Sbjct: 145 VVLTVAALP-MLKQSNGSIVVVSSLAGKV--AYPMVAAYSASKFALDGFFSSIRKEYSVS 201
Query: 230 GIDVQCQVLFLLCFYNLND 248
            ++V       LC   L D
Sbjct: 202 RVNVS----ITLCVLGLID 216

>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 16/199 (8%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL-KDVSDSIQAKYAKTQIKSVVV 111
           G   +VTG + GIG+  A+ LAK G ++V+  R+ + L K VS  ++   A     +  +
Sbjct: 17  GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTM 76
Query: 112 DFSGDLDEGVERIKEAIEGLDVGVL--INNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
           +     ++ V +  + + GLD+ +L  I N  ++      FH+ D   ++  ++VN    
Sbjct: 77  EDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLN-----LFHD-DIHHVRKSMEVNFLSY 130
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
             +T A LP MLK+  G+IV + S A  V  + P+ + Y+A+K  +D F  S+  EY  S
Sbjct: 131 VVLTVAALP-MLKQSNGSIVVVSSLAGKV--AYPMVAAYSASKFALDGFFSSIRKEYSVS 187
Query: 230 GIDVQCQVLFLLCFYNLND 248
            ++V       LC   L D
Sbjct: 188 RVNVS----ITLCVLGLID 202

>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 100/199 (50%), Gaps = 16/199 (8%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL-KDVSDSIQAKYAKTQIKSVVV 111
           G   +VTG + GIG+  A+ LAK G ++V+  R+ + L K VS  ++   A     +  +
Sbjct: 14  GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTM 73
Query: 112 DFSGDLDEGVERIKEAIEGLDVGVL--INNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
           +     ++ V +  + + GLD+ +L  I N  ++      FH+ D   ++  ++VN    
Sbjct: 74  EDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLN-----LFHD-DIHHVRKSMEVNFLSY 127
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
             +T A LP MLK+  G+IV + S A  V  + PL + Y+A+K  +D F  S+  EY  S
Sbjct: 128 VVLTVAALP-MLKQSNGSIVVVSSLAGKV--AYPLVAAYSASKFALDGFFSSIRKEYSVS 184
Query: 230 GIDVQCQVLFLLCFYNLND 248
            ++V       LC   L D
Sbjct: 185 RVNVS----ITLCVLGLID 199

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 63.5 bits (153), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 14/185 (7%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVV-VDF 113
           A++TG T GIG + A  LAK G N+VL G   PD+++ V+D +    + T +        
Sbjct: 28  AVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADXTK 87
Query: 114 SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKN---LIKVNVEGTT 170
             ++ +    + +   G D  +L+NN G+     +F  +++   ++    +I VN+  + 
Sbjct: 88  PSEIADXXAXVADRFGGAD--ILVNNAGV-----QFVEKIEDFPVEQWDRIIAVNLSSSF 140
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
              +  +P   K+  G I+NI S   +V  + P  S Y A K  I   ++++ +E  +SG
Sbjct: 141 HTIRGAIPPXKKKGWGRIINIASAHGLV--ASPFKSAYVAAKHGIXGLTKTVALEVAESG 198
Query: 231 IDVQC 235
           + V  
Sbjct: 199 VTVNS 203

>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 16/199 (8%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL-KDVSDSIQAKYAKTQIKSVVV 111
           G   +VTG + GIG+  A+ LAK G ++V+  R+ + L K VS  ++   A     +  +
Sbjct: 28  GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTM 87
Query: 112 DFSGDLDEGVERIKEAIEGLDVGVL--INNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
           +     ++ V +  + + GLD+ +L  I N  ++      FH+ D   ++  ++VN    
Sbjct: 88  EDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLN-----LFHD-DIHHVRKSMEVNFLSY 141
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
             +T A LP MLK+  G+IV + S A  V  + P+ + Y+A+K  +D F  S+  EY  S
Sbjct: 142 VVLTVAALP-MLKQSNGSIVVVSSLAGKV--AYPMVAAYSASKFALDGFFSSIRKEYSVS 198
Query: 230 GIDVQCQVLFLLCFYNLND 248
            ++V       LC   L D
Sbjct: 199 RVNVS----ITLCVLGLID 213

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 89/180 (49%), Gaps = 11/180 (6%)
Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF--S 114
            +TG T G G++ A + A+ G +LVL GR  ++L+ ++  +    AKT++  + +D    
Sbjct: 25  FITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELS---AKTRVLPLTLDVRDR 81
Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
                 V+ + E    L    LINN G++          D       +  N++G    T+
Sbjct: 82  AAXSAAVDNLPEEFATLR--GLINNAGLAL-GTDPAQSCDLDDWDTXVDTNIKGLLYSTR 138
Query: 175 AVLPGMLKRKKGA-IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
            +LP ++    GA IVN+GS  A   P  P   VY  TKA+++QFS +L  + + +G+ V
Sbjct: 139 LLLPRLIAHGAGASIVNLGS-VAGKWPY-PGSHVYGGTKAFVEQFSLNLRCDLQGTGVRV 196

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 96/184 (52%), Gaps = 15/184 (8%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSV-VV 111
           G  A+VTG + G+GK+ A++L   G N+VL G         S S+ A   + +   + VV
Sbjct: 5   GKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGS------PASTSLDATAEEFKAAGINVV 58
Query: 112 DFSGDLD--EGVER-IKEAIEGLD-VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVE 167
              GD+   E VE  +K A++    + +L+NN GI+        ++ +    +++  N++
Sbjct: 59  VAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRD--TLMLKMSEKDWDDVLNTNLK 116
Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
                T+AV   MLK+K G I+NI S A I+   +   + YAA+KA +  F++S+  E+ 
Sbjct: 117 SAYLCTKAVSKIMLKQKSGKIINITSIAGII--GNAGQANYAASKAGLIGFTKSIAKEFA 174
Query: 228 KSGI 231
             GI
Sbjct: 175 AKGI 178

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 94/185 (50%), Gaps = 13/185 (7%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG + GIGK+ A  LA+ G  ++    +    + +SD     Y     K + ++
Sbjct: 12  GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISD-----YLGDNGKGMALN 66
Query: 113 FSGDLDEGVERIKEAI--EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
            +    E +E + +AI  E   V +L+NN GI+         + +    ++++ N+    
Sbjct: 67  VTNP--ESIEAVLKAITDEFGGVDILVNNAGITRD--NLLMRMKEEEWSDIMETNLTSIF 122
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
           ++++AVL GM+K+++G I+N+GS   +    +   + +AA KA +  F++S+  E    G
Sbjct: 123 RLSKAVLRGMMKKRQGRIINVGS--VVGTMGNAGQANFAAAKAGVIGFTKSMAREVASRG 180
Query: 231 IDVQC 235
           + V  
Sbjct: 181 VTVNT 185

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 9/184 (4%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG + GIG     +LA  G ++    RN  +L D     ++K  K +     + 
Sbjct: 9   GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLS 68
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGIS-YPYARFFHEVDQVLLKNLIKVNVEGTTK 171
              +  E +  +     G  + +L+NN GI  Y  A+ +   D  L   ++ +N E    
Sbjct: 69  SRSERQELMNTVANHFHG-KLNILVNNAGIVIYKEAKDYTVEDYSL---IMSINFEAAYH 124
Query: 172 VTQAVLPGMLKRKKGAIVNIGS-GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
           ++    P +   ++G +V I S   A+ +P +   +VY ATK  +DQ +R L  E+ K  
Sbjct: 125 LSVLAHPFLKASERGNVVFISSVSGALAVPYE---AVYGATKGAMDQLTRCLAFEWAKDN 181
Query: 231 IDVQ 234
           I V 
Sbjct: 182 IRVN 185

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 84/184 (45%), Gaps = 9/184 (4%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG + GIG     +LA  G ++    RN  +L D     ++K  K +     + 
Sbjct: 8   GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLS 67
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGIS-YPYARFFHEVDQVLLKNLIKVNVEGTTK 171
              +  E +  +     G  + +L+NN GI  Y  A+ +   D  L   ++ +N E    
Sbjct: 68  SRSERQELMNTVANHFHG-KLNILVNNAGIVIYKEAKDYTVEDYSL---IMSINFEAAYH 123
Query: 172 VTQAVLPGMLKRKKGAIVNIGS-GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
           ++    P +   ++G +V I S   A+ +P +   +VY ATK  +DQ +R L  E+ K  
Sbjct: 124 LSVLAHPFLKASERGNVVFISSVSGALAVPYE---AVYGATKGAMDQLTRCLAFEWAKDN 180
Query: 231 IDVQ 234
           I V 
Sbjct: 181 IRVN 184

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 93/185 (50%), Gaps = 13/185 (7%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG + GIGK+ A  LA+ G  ++    +    + +SD     Y     K + ++
Sbjct: 12  GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISD-----YLGDNGKGMALN 66
Query: 113 FSGDLDEGVERIKEAI--EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
            +    E +E + +AI  E   V +L+NN  I+         + +    ++++ N+    
Sbjct: 67  VTNP--ESIEAVLKAITDEFGGVDILVNNAAITRD--NLLMRMKEEEWSDIMETNLTSIF 122
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
           ++++AVL GM+K+++G I+N+GS   +    +   + YAA KA +  F++S+  E    G
Sbjct: 123 RLSKAVLRGMMKKRQGRIINVGS--VVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRG 180
Query: 231 IDVQC 235
           + V  
Sbjct: 181 VTVNT 185

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 92/182 (50%), Gaps = 12/182 (6%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVTG T GIG   A +L K GL + +  R  + L+     ++    +   ++  V    
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 88
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
           +++  V  + E    +D  VL+NN G     A    E+   L  ++++ N+ G  +VT+ 
Sbjct: 89  EIEALVAAVVERYGPVD--VLVNNAGRLGGGA--TAELADELWLDVVETNLTGVFRVTKQ 144
Query: 176 VLP--GMLKRKKGAIVNIGS--GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           VL   GML+R  G IVNI S  G   V+ + P    Y+A+K  +  F+++L +E  ++GI
Sbjct: 145 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAP----YSASKHGVVGFTKALGLELARTGI 200
Query: 232 DV 233
            V
Sbjct: 201 TV 202

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 22/191 (11%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQA-KYAKTQIKSVVV 111
           G  ALVTG + G+G++ A  LA  G  +++ G +P +   V+ ++Q  +      ++V  
Sbjct: 26  GRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSR---VAQTVQEFRNVGHDAEAVAF 82
Query: 112 DFSGDLD--EGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
           D + + +  E   R+ E  +G+DV +L+NN GI   + +   E++    + +I  N+   
Sbjct: 83  DVTSESEIIEAFARLDE--QGIDVDILVNNAGIQ--FRKPMIELETADWQRVIDTNLTSA 138
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGS-----GAAIVIPSDPLYSVYAATKAYIDQFSRSLYV 224
             + +     M+ R  G IVNIGS       A V P       Y   K  I   +R++  
Sbjct: 139 FMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAP-------YTVAKGGIKMLTRAMAA 191
Query: 225 EYRKSGIDVQC 235
           E+ + GI    
Sbjct: 192 EWAQYGIQANA 202

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 93/192 (48%), Gaps = 27/192 (14%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG T G+G++ A  L   G  + L G   +KLK+++          ++   +  
Sbjct: 7   GRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELA---------AELGERIFV 57
Query: 113 FSGDLD--EGV----ERIKEAIEGLDVGVLINNVGISYP--YARFFHEV-DQVLLKNLIK 163
           F  +L   E V    ++ +E + G+D  +L+NN GI+    + R   E  D VL  NL  
Sbjct: 58  FPANLSDREAVKALGQKAEEEMGGVD--ILVNNAGITRDGLFVRMSDEDWDAVLTVNLTS 115
Query: 164 VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
           V       +T+ +   M++R+ G I+NI S   + +  +P  + Y A+KA +  FS+SL 
Sbjct: 116 V-----FNLTRELTHPMMRRRNGRIINITS--IVGVTGNPGQANYCASKAGLIGFSKSLA 168
Query: 224 VEYRKSGIDVQC 235
            E     + V C
Sbjct: 169 QEIASRNVTVNC 180

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 92/182 (50%), Gaps = 12/182 (6%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVTG T GIG   A +L K GL + +  R  + L+     ++    +   ++  V    
Sbjct: 25  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 84
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
           +++  V  + E    +D  VL+NN G     A    E+   L  ++++ N+ G  +VT+ 
Sbjct: 85  EIEALVAAVVERYGPVD--VLVNNAGRLGGGA--TAELADELWLDVVETNLTGVFRVTKQ 140
Query: 176 VLP--GMLKRKKGAIVNIGS--GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           VL   GML+R  G IVNI S  G   V+ + P    Y+A+K  +  F+++L +E  ++GI
Sbjct: 141 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAP----YSASKHGVVGFTKALGLELARTGI 196
Query: 232 DV 233
            V
Sbjct: 197 TV 198

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 96/192 (50%), Gaps = 27/192 (14%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG + GIG++ A  LA  G  ++    + +  + +SD     Y     K ++++
Sbjct: 5   GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISD-----YLGANGKGLMLN 59
Query: 113 FS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIK 163
            +    ++  +E+I+   E  +V +L+NN GI+          D +L++       ++I+
Sbjct: 60  VTDPASIESVLEKIRA--EFGEVDILVNNAGITR---------DNLLMRMKDEEWNDIIE 108
Query: 164 VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
            N+    ++++AV+  M+K++ G I+ IGS   +    +   + YAA KA +  FS+SL 
Sbjct: 109 TNLSSVFRLSKAVMRAMMKKRHGRIITIGS--VVGTMGNGGQANYAAAKAGLIGFSKSLA 166
Query: 224 VEYRKSGIDVQC 235
            E    GI V  
Sbjct: 167 REVASRGITVNV 178

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 93/192 (48%), Gaps = 27/192 (14%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG T G+G++ A  L   G  + L G   +KLK+++          ++   +  
Sbjct: 10  GRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELA---------AELGERIFV 60
Query: 113 FSGDLD--EGV----ERIKEAIEGLDVGVLINNVGISYP--YARFFHEV-DQVLLKNLIK 163
           F  +L   E V    ++ +E + G+D  +L+NN GI+    + R   E  D VL  NL  
Sbjct: 61  FPANLSDREAVKALGQKAEEEMGGVD--ILVNNAGITRDGLFVRMSDEDWDAVLTVNLTS 118
Query: 164 VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
           V       +T+ +   M++R+ G I+NI S   + +  +P  + Y A+KA +  FS+SL 
Sbjct: 119 V-----FNLTRELTHPMMRRRNGRIINITS--IVGVTGNPGQANYCASKAGLIGFSKSLA 171
Query: 224 VEYRKSGIDVQC 235
            E     + V C
Sbjct: 172 QEIASRNVTVNC 183

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 93/185 (50%), Gaps = 13/185 (7%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG + GIGK+ A  LA+ G  ++    +    + +SD     Y     K + ++
Sbjct: 12  GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISD-----YLGDNGKGMALN 66
Query: 113 FSGDLDEGVERIKEAI--EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
            +    E +E + +AI  E   V +L+NN  I+         + +    ++++ N+    
Sbjct: 67  VTNP--ESIEAVLKAITDEFGGVDILVNNADITRD--NLLMRMKEEEWSDIMETNLTSIF 122
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
           ++++AVL GM+K+++G I+N+GS   +    +   + YAA KA +  F++S+  E    G
Sbjct: 123 RLSKAVLRGMMKKRQGRIINVGS--VVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRG 180
Query: 231 IDVQC 235
           + V  
Sbjct: 181 VTVNT 185

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 91/183 (49%), Gaps = 11/183 (6%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  AL+TG + GIG++ A  LA  G  + +  R  +KL+ + D + A  AK  +  + V 
Sbjct: 7   GKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVA 66
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEVDQVLLKNLIKVNVEGTT 170
               +D  V    EA+ GLD  +L+NN GI    P      + D      +I  N+ G  
Sbjct: 67  DRQGVDAAVASTVEALGGLD--ILVNNAGIMLLGP----VEDADTTDWTRMIDTNLLGLM 120
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
            +T+A LP +L R KG +V + S A  V   +   +VY ATK  ++ FS +L  E  + G
Sbjct: 121 YMTRAALPHLL-RSKGTVVQMSSIAGRVNVRNA--AVYQATKFGVNAFSETLRQEVTERG 177
Query: 231 IDV 233
           + V
Sbjct: 178 VRV 180

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 12/183 (6%)
Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS-- 114
           LVTG T GIG+  A   A+ G N+ +  R+P +L  V+  +  +     +  V +D S  
Sbjct: 45  LVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAEL-GELGAGNVIGVRLDVSDP 103
Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
           G   +    + +A   LD  V+  N GI +P AR      +  L  ++ VNV+GT    Q
Sbjct: 104 GSCADAARTVVDAFGALD--VVCANAGI-FPEARLDTMTPE-QLSEVLDVNVKGTVYTVQ 159
Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSD--PLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
           A L  +    +G ++   S   I  P    P +S Y A+KA    F R+  +E    G+ 
Sbjct: 160 ACLAPLTASGRGRVILTSS---ITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVT 216
Query: 233 VQC 235
           V  
Sbjct: 217 VNA 219

>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 14/198 (7%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL-KDVSDSIQAKYAKTQIKSVVV 111
           G   +VTG + GIG+  A+ LAK G ++V+  R+ + L K V+  ++   A     +  +
Sbjct: 9   GKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAGSM 68
Query: 112 DFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFH-EVDQVLLKNLIKVNVEGTT 170
           +     +E V      + GLD+ +++N+V   Y    FFH E+D V  +  ++VN     
Sbjct: 69  EDMTFAEEFVAEAGNLMGGLDM-LILNHV--LYNRLTFFHGEIDNV--RKSMEVNFHSFV 123
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
            ++ A +P ML + +G+I  + S A  +  + PL + Y+A+K  +D F  +L  E+  + 
Sbjct: 124 VLSVAAMP-MLMQSQGSIAVVSSVAGKI--TYPLIAPYSASKFALDGFFSTLRSEFLVNK 180
Query: 231 IDVQCQVLFLLCFYNLND 248
           ++V       LC   L D
Sbjct: 181 VNVSIT----LCILGLID 194

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 15/185 (8%)
Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF--- 113
           LVTG +DGIG+  A   A+ G  ++L+GRN +KL+ V+  I  +  + Q +  ++D    
Sbjct: 18  LVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGR-QPQWFILDLLTC 76
Query: 114 -SGDLDEGVERIKEAIEGLDVGVLINN--VGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
            S D  +  +RI      LD GVL N   +G   P +    E D  + +++++VNV  T 
Sbjct: 77  TSEDCQQLAQRIAVNYPRLD-GVLHNAGLLGDVCPMS----EQDPQVWQDVMQVNVNATF 131
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
            +TQA+LP +LK   G++V   S       ++  +  YAA+K   +   + L  EY++  
Sbjct: 132 MLTQALLPLLLKSDAGSLVFTSSSVGRQGRAN--WGAYAASKFATEGMMQVLADEYQQR- 188
Query: 231 IDVQC 235
           + V C
Sbjct: 189 LRVNC 193

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 96/192 (50%), Gaps = 27/192 (14%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG + GIG++ A  LA  G  ++    + +  + +SD     Y     K ++++
Sbjct: 5   GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISD-----YLGANGKGLMLN 59
Query: 113 FS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIK 163
            +    ++  +E+I+   E  +V +L+NN GI+          D +L++       ++I+
Sbjct: 60  VTDPASIESVLEKIRA--EFGEVDILVNNAGITR---------DNLLMRMKDEEWNDIIE 108
Query: 164 VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
            N+    ++++AV+  M+K++ G I+ IGS   +    +   + +AA KA +  FS+SL 
Sbjct: 109 TNLSSVFRLSKAVMRAMMKKRHGRIITIGS--VVGTMGNGGQANFAAAKAGLIGFSKSLA 166
Query: 224 VEYRKSGIDVQC 235
            E    GI V  
Sbjct: 167 REVASRGITVNV 178

>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 14/198 (7%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL-KDVSDSIQAKYAKTQIKSVVV 111
           G   +VTG + GIG+  A+ LAK G ++V+  R+ + L K V+  ++   A     +  +
Sbjct: 32  GKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAGSM 91
Query: 112 DFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFH-EVDQVLLKNLIKVNVEGTT 170
           +     +E V      + GLD+ +++N+V   Y    FFH E+D V  +  ++VN     
Sbjct: 92  EDMTFAEEFVAEAGNLMGGLDM-LILNHV--LYNRLTFFHGEIDNV--RKSMEVNFHSFV 146
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
            ++ A +P ML + +G+I  + S A  +  + PL + Y+A+K  +D F  +L  E+  + 
Sbjct: 147 VLSVAAMP-MLMQSQGSIAVVSSVAGKI--TYPLIAPYSASKFALDGFFSTLRSEFLVNK 203
Query: 231 IDVQCQVLFLLCFYNLND 248
           ++V       LC   L D
Sbjct: 204 VNVSIT----LCILGLID 217

>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 14/198 (7%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL-KDVSDSIQAKYAKTQIKSVVV 111
           G   +VTG + GIG+  A+ LAK G ++V+  R+ + L K V+  ++   A     +  +
Sbjct: 11  GKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAGSM 70
Query: 112 DFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFH-EVDQVLLKNLIKVNVEGTT 170
           +     +E V      + GLD+ +++N+V   Y    FFH E+D V  +  ++VN     
Sbjct: 71  EDMTFAEEFVAEAGNLMGGLDM-LILNHV--LYNRLTFFHGEIDNV--RKSMEVNFHSFV 125
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
            ++ A +P ML + +G+I  + S A  +  + PL + Y+A+K  +D F  +L  E+  + 
Sbjct: 126 VLSVAAMP-MLMQSQGSIAVVSSVAGKI--TYPLIAPYSASKFALDGFFSTLRSEFLVNK 182
Query: 231 IDVQCQVLFLLCFYNLND 248
           ++V       LC   L D
Sbjct: 183 VNVSIT----LCILGLID 196

>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 14/198 (7%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL-KDVSDSIQAKYAKTQIKSVVV 111
           G   +VTG + GIG+  A+ LAK G ++V+  R+ + L K V+  ++   A     +  +
Sbjct: 11  GKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAGSM 70
Query: 112 DFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFH-EVDQVLLKNLIKVNVEGTT 170
           +     +E V      + GLD+ +++N+V   Y    FFH E+D V  +  ++VN     
Sbjct: 71  EDMTFAEEFVAEAGNLMGGLDM-LILNHV--LYNRLTFFHGEIDNV--RKSMEVNFHSFV 125
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
            ++ A +P ML + +G+I  + S A  +  + PL + Y+A+K  +D F  +L  E+  + 
Sbjct: 126 VLSVAAMP-MLMQSQGSIAVVSSVAGKI--TYPLIAPYSASKFALDGFFSTLRSEFLVNK 182
Query: 231 IDVQCQVLFLLCFYNLND 248
           ++V       LC   L D
Sbjct: 183 VNVS----ITLCILGLID 196

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 5/180 (2%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVT  TDGIG + A +LA+ G ++V+  R    +     ++Q +          V  + 
Sbjct: 18  ALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAE 77
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
           D +  V    +   G+D  +L++N  ++ P+     +V + +    + +NV+    +T+A
Sbjct: 78  DRERLVATAVKLHGGID--ILVSNAAVN-PFFGSIMDVTEEVWDKTLDINVKAPALMTKA 134
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
           V+P M KR  G++V + S AA   PS P +S Y  +K  +   +++L +E     I V C
Sbjct: 135 VVPEMEKRGGGSVVIVSSIAAFS-PS-PGFSPYNVSKTALLGLTKTLAIELAPRNIRVNC 192

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 22/188 (11%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVV 111
           G  A+VTG T GIG + A +LAK G ++V+ G   P+ ++    ++++K+    +K+  +
Sbjct: 4   GKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFG---VKAYYL 60
Query: 112 DFSGDLDEG------VERIKEAIEGLDVGVLINNVGISY--PYARFFHEVDQVLLKNLIK 163
           +   DL +       + +  EA+ GLD  +L+NN GI +  P   F   VD+     +I 
Sbjct: 61  N--ADLSDAQATRDFIAKAAEALGGLD--ILVNNAGIQHTAPIEEF--PVDK--WNAIIA 112
Query: 164 VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
           +N+      T A LP M K+  G I+NI S   +V   +   S Y A K  +   ++   
Sbjct: 113 LNLSAVFHGTAAALPIMQKQGWGRIINIASAHGLVASVN--KSAYVAAKHGVVGLTKVTA 170
Query: 224 VEYRKSGI 231
           +E    GI
Sbjct: 171 LENAGKGI 178

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 16/188 (8%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG + GIG+  A  L + G  + +  R+ +   D +  + A Y   Q  ++  D
Sbjct: 29  GRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSA-YGDCQ--AIPAD 85
Query: 113 FSGDLDEGVERIKEAIEGLD--VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
            S   + G  R+ +A+  L   + +L+NN G S+  A   + V     + ++++NV    
Sbjct: 86  LSS--EAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSG--WEKVMQLNVTSVF 141
Query: 171 KVTQAVLPGMLKRKKGA-----IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
              Q +LP +L+R   A     ++NIGS A I    +  Y+ Y  +KA + Q SR L  E
Sbjct: 142 SCIQQLLP-LLRRSASAENPARVINIGSVAGISAMGEQAYA-YGPSKAALHQLSRMLAKE 199
Query: 226 YRKSGIDV 233
                I+V
Sbjct: 200 LVGEHINV 207

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 36/192 (18%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG + GIG++ A  LA  G  ++    + +  + +SD     Y     K ++++
Sbjct: 5   GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISD-----YLGANGKGLMLN 59
Query: 113 FS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIK 163
            +    ++  +E+I+   E  +V +L+NN GI+          D +L++       ++I+
Sbjct: 60  VTDPASIESVLEKIR--AEFGEVDILVNNAGITR---------DNLLMRMKDEEWNDIIE 108
Query: 164 VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
            N+    ++++AV+  M+K++ G I+ IG  A            YAA KA +  FS+SL 
Sbjct: 109 TNLSSVFRLSKAVMRAMMKKRHGRIITIGGQAN-----------YAAAKAGLIGFSKSLA 157
Query: 224 VEYRKSGIDVQC 235
            E    GI V  
Sbjct: 158 REVASRGITVNV 169

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 94/186 (50%), Gaps = 12/186 (6%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG + GIG++ A +L + G  ++    +    + ++++++A     +   +V+D
Sbjct: 27  GKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKAN--GVEGAGLVLD 84
Query: 113 FSGDLDEGVERIKEAIEGLDVG---VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
            S D  E V    E I+   +G   +++NN GI+        + D+    +++  N+   
Sbjct: 85  VSSD--ESVAATLEHIQ-QHLGQPLIVVNNAGITRDNLLVRMKDDEWF--DVVNTNLNSL 139
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
            ++++AVL GM K + G I+NIGS   +    +   + YAA KA ++ F+R+L  E    
Sbjct: 140 YRLSKAVLRGMTKARWGRIINIGS--VVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSR 197
Query: 230 GIDVQC 235
            I V  
Sbjct: 198 AITVNA 203

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 86/184 (46%), Gaps = 10/184 (5%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  A+VTG   GIG++ A   A+ G +++  GR  D +K+V+D I       +  +VV D
Sbjct: 31  GRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAE--AVVAD 87
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARF-FHEVDQVLLKNLIKVNVEGTTK 171
            + DL+      +E      V VL+NN GI    AR    EV     + ++ VN++    
Sbjct: 88  LA-DLEGAANVAEELAATRRVDVLVNNAGI---IARAPAEEVSLGRWREVLTVNLDAAWV 143
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           ++++    ML    G IV I S   +        + YAA+K  +   +R+L  E+   G+
Sbjct: 144 LSRSFGTAMLAHGSGRIVTIAS--MLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGV 201
Query: 232 DVQC 235
            V  
Sbjct: 202 GVNA 205

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 14/185 (7%)
Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF--- 113
           LVTG +DGIG+  A   A+ G  ++L+GRN +KL+ V+  I A     Q +   +D    
Sbjct: 18  LVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHI-ADEQHVQPQWFTLDLLTC 76
Query: 114 -SGDLDEGVERIKEAIEGLDVGVLINN--VGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
            + +  +  +RI      LD GVL N   +G   P +    E D  + +++++VNV  T 
Sbjct: 77  TAEECRQVADRIAAHYPRLD-GVLHNAGLLGEIGPMS----EQDPQIWQDVMQVNVNATF 131
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
            +TQA+LP +LK   G++V   S       ++  +  YA +K   +   + L  EY+   
Sbjct: 132 MLTQALLPLLLKSDAGSLVFTSSSVGRQGRAN--WGAYATSKFATEGMMQVLADEYQNRS 189
Query: 231 IDVQC 235
           + V C
Sbjct: 190 LRVNC 194

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 92/183 (50%), Gaps = 8/183 (4%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG + G+G   A  LA+ G ++V+  RN ++  + +  +  KY   +  +   D
Sbjct: 21  GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG-VETMAFRCD 79
Query: 113 FSG--DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
            S   ++ + +E +KE    LD   ++N  GI+  +      +D+   + +I+VN+ GT 
Sbjct: 80  VSNYEEVKKLLEAVKEKFGKLD--TVVNAAGINRRHPAEEFPLDE--FRQVIEVNLFGTY 135
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
            V +     + +    +I+NIGS   +   + P  S YAA+K  +   +++L  E+ + G
Sbjct: 136 YVCREAFSLLRESDNPSIINIGS-LTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYG 194
Query: 231 IDV 233
           I V
Sbjct: 195 IRV 197

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 88/183 (48%), Gaps = 11/183 (6%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  AL+TG + GIG++ A  LA  G  + +  R  +KL+ + D + A  AK  +  + V 
Sbjct: 7   GKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVA 66
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEVDQVLLKNLIKVNVEGTT 170
               +D  V    EA+ GLD  +L+NN GI    P      + D       I  N+ G  
Sbjct: 67  DRQGVDAAVASTVEALGGLD--ILVNNAGIXLLGP----VEDADTTDWTRXIDTNLLGLX 120
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
             T+A LP +L R KG +V   S A  V   +   +VY ATK  ++ FS +L  E  + G
Sbjct: 121 YXTRAALPHLL-RSKGTVVQXSSIAGRVNVRNA--AVYQATKFGVNAFSETLRQEVTERG 177
Query: 231 IDV 233
           + V
Sbjct: 178 VRV 180

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 57.4 bits (137), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 15/183 (8%)
Query: 57  LVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           +VTG + GIGK+ A  L K G   LV   R+    ++VS  I+A   +       + F G
Sbjct: 5   VVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQA------ITFGG 58
Query: 116 DLDEGVE---RIKEAIEGLD-VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
           D+ +  +    +K AI+    + V++NN GI+         + +     +I +N+ G   
Sbjct: 59  DVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDT--LLIRMKKSQWDEVIDLNLTGVFL 116
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
            TQA    M+K++KG I+NI S   ++   +   + YAA KA +  FS++   E     I
Sbjct: 117 CTQAATKIMMKKRKGRIINIASVVGLI--GNIGQANYAAAKAGVIGFSKTAAREGASRNI 174
Query: 232 DVQ 234
           +V 
Sbjct: 175 NVN 177

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 57.0 bits (136), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 90/185 (48%), Gaps = 22/185 (11%)
Query: 55  WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           W LVTG + G G++ A      G  ++   R  + L D+   + A   + +  S+     
Sbjct: 8   W-LVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDL---VAAYPDRAEAISL----- 58
Query: 115 GDLDEGVERIKEAIEGL-----DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
            D+ +G ERI      +      V VL+NN G +   A  F E  +  L++L +++V G 
Sbjct: 59  -DVTDG-ERIDVVAADVLARYGRVDVLVNNAGRTQVGA--FEETTERELRDLFELHVFGP 114
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGS-GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
            ++T+A+LP   +R  G++VNI S G  +       +S Y+ATKA ++Q S  L  E   
Sbjct: 115 ARLTRALLPQXRERGSGSVVNISSFGGQLSFAG---FSAYSATKAALEQLSEGLADEVAP 171
Query: 229 SGIDV 233
            GI V
Sbjct: 172 FGIKV 176

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 6/180 (3%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A+VTG + GIG++ A +LA+ G  ++         + +  + +    + +   + V+ + 
Sbjct: 31  AIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDAT 90
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
            +D  VE   +    L+  VL+NN GI+        + D+     +I  N++   ++++A
Sbjct: 91  AVDALVESTLKEFGALN--VLVNNAGITQDQLAMRMKDDE--WDAVIDTNLKAVFRLSRA 146
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
           VL  M+K + G IVNI S   +    +P    YAA KA +   +R+L  E    GI V C
Sbjct: 147 VLRPMMKARGGRIVNITS--VVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGITVNC 204

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 95/183 (51%), Gaps = 11/183 (6%)
Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF--- 113
           LVTG +DGIG+  A   A+ G  ++L+GRN +KL+ V+  I  +  + Q +  ++D    
Sbjct: 16  LVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGR-QPQWFILDLLTC 74
Query: 114 -SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
            S +  +  +RI      LD GVL +N G+         +  QV  +++++VNV  T  +
Sbjct: 75  TSENCQQLAQRIAVNYPRLD-GVL-HNAGLLGDVCPMSEQNPQV-WQDVMQVNVNATFML 131
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
           TQA+LP +LK   G++V   S       ++  +  YAA+K   +   + L  EY++  + 
Sbjct: 132 TQALLPLLLKSDAGSLVFTSSSVGRQGRAN--WGAYAASKFATEGMMQVLADEYQQR-LR 188
Query: 233 VQC 235
           V C
Sbjct: 189 VNC 191

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 9/185 (4%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVV 111
           G  ALVTG + GIG++ A  LAK G N+V+    N  K  +V D I+ K     I +V  
Sbjct: 4   GKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIK-KLGSDAI-AVRA 61
Query: 112 DFSGDLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
           D + + ++    +K+ ++    V +L+NN G++         + +     +I  N++G  
Sbjct: 62  DVA-NAEDVTNMVKQTVDVFGQVDILVNNAGVTKD--NLLMRMKEEEWDTVINTNLKGVF 118
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
             T+AV   M++++ G IVNI S   + +  +P  + Y A KA +   +++   E     
Sbjct: 119 LCTKAVSRFMMRQRHGRIVNIAS--VVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRN 176
Query: 231 IDVQC 235
           I V  
Sbjct: 177 ITVNA 181

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 9/184 (4%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  A+VTG + GIG + A +L   G  +VL  R+ +KL+ V   I A   + +  +  + 
Sbjct: 29  GQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLS 88
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
            S  +      +  A    D  VL+NN G+ + +    H +       LI VN++    +
Sbjct: 89  HSDAIAAFATGVLAAHGRCD--VLVNNAGVGW-FGGPLHTMKPAEWDALIAVNLKAPYLL 145
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY--SVYAATKAYIDQFSRSLYVEYRKSG 230
            +A  P M+  K+G I+NI S A      +P+   + Y A+K  ++    S   E R+  
Sbjct: 146 LRAFAPAMIAAKRGHIINISSLAG----KNPVADGAAYTASKWGLNGLMTSAAEELRQHQ 201
Query: 231 IDVQ 234
           + V 
Sbjct: 202 VRVS 205

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 13/190 (6%)
Query: 47  KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQI 106
           + LR     A+VTG    IG +    LA+ G  +++   +        + +  +     +
Sbjct: 7   EKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDL--RMEGHDV 64
Query: 107 KSVVVDFSGDLDEGVERIKEAIEGLD-----VGVLINNVGISYPYARFFHEVDQVLLKNL 161
            SVV+D +       E ++ A+  +      V +L+   GI     +     D   LK  
Sbjct: 65  SSVVMDVTN-----TESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQ- 118
Query: 162 IKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRS 221
           + +N+ G  +  QAV   ML++K+G IV IGS + +++      + Y A+KA + Q+ RS
Sbjct: 119 VDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRS 178
Query: 222 LYVEYRKSGI 231
           L  E+   GI
Sbjct: 179 LAAEWAPHGI 188

>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL-KDVSDSIQAKYAKTQIKSVVV 111
           G   +VTG + GIG+  A+ L+K G ++VL  R+ + L K VS  ++   A     +  +
Sbjct: 18  GKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAGTM 77
Query: 112 DFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
           +     ++ + +  + + GLD+ +++N+  I+      FH+ D   ++ +++VN      
Sbjct: 78  EDMTFAEQFIVKAGKLMGGLDM-LILNH--ITQTSLSLFHD-DIHSVRRVMEVNFLSYVV 133
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           ++ A LP MLK+  G+I  I S A  +  + P+ + Y+A+K  +D F  ++  E   + +
Sbjct: 134 MSTAALP-MLKQSNGSIAVISSLAGKM--TQPMIAPYSASKFALDGFFSTIRTELYITKV 190
Query: 232 DVQCQVLFLLCFYNLND 248
           +V       LC   L D
Sbjct: 191 NVS----ITLCVLGLID 203

>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL-KDVSDSIQAKYAKTQIKSVVV 111
           G   +VTG + GIG+  A+ L+K G ++VL  R+ + L K VS  ++   A     +  +
Sbjct: 9   GKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAGTM 68
Query: 112 DFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
           +     ++ + +  + + GLD+ +++N+  I+      FH+ D   ++ +++VN      
Sbjct: 69  EDMTFAEQFIVKAGKLMGGLDM-LILNH--ITQTSLSLFHD-DIHSVRRVMEVNFLSYVV 124
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           ++ A LP MLK+  G+I  I S A  V  + P+ + Y+A+K  +D F  ++  E   + +
Sbjct: 125 MSTAALP-MLKQSNGSIAVISSLAGKV--TYPMVAPYSASKFALDGFFSTIRTELYITKV 181
Query: 232 DVQCQVLFLLCFYNLND 248
           +V       LC   L D
Sbjct: 182 NVS----ITLCVLGLID 194

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 95/183 (51%), Gaps = 11/183 (6%)
Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           LVTG +DGIG+  A   A+ G  ++L+GRN +KL+ V+  I  +  + Q +  ++D    
Sbjct: 14  LVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGR-QPQWFILDLLTC 72
Query: 117 LDEGVERIKEAI----EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
             E  +++ + I      LD GVL +N G+         +  QV  ++++++NV  T  +
Sbjct: 73  TSENCQQLAQRIVVNYPRLD-GVL-HNAGLLGDVCPMSEQNPQV-WQDVMQINVNATFML 129
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
           TQA+LP +LK   G++V   S       ++  +  YAA+K   +   + L  EY++  + 
Sbjct: 130 TQALLPLLLKSDAGSLVFTSSSVGRQGRAN--WGAYAASKFATEGMMQVLADEYQQR-LR 186
Query: 233 VQC 235
           V C
Sbjct: 187 VNC 189

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 13/185 (7%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG + GIGK+ A  LA+ G  ++    +    + +SD     Y     K   ++
Sbjct: 9   GKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISD-----YLGDNGKGXALN 63
Query: 113 FSGDLDEGVERIKEAI--EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
            +    E +E + +AI  E   V +L+NN GI+           +    ++ + N+    
Sbjct: 64  VTN--PESIEAVLKAITDEFGGVDILVNNAGITRD--NLLXRXKEEEWSDIXETNLTSIF 119
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
           ++++AVL G  K+++G I+N+GS   +    +   + YAA KA +  F++S   E    G
Sbjct: 120 RLSKAVLRGXXKKRQGRIINVGS--VVGTXGNAGQANYAAAKAGVIGFTKSXAREVASRG 177
Query: 231 IDVQC 235
           + V  
Sbjct: 178 VTVNT 182

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G+ ALVTG + GIG +   +LA  G  +    RN  +L +  +  + K     ++  V D
Sbjct: 21  GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCD 78
Query: 113 F--SGDLDEGVERIKEAIEGLDVGVLINNVGIS-YPYARFFHEVDQVLLKNLIKVNVEGT 169
                + D+ ++ +    +G  + +L+NN G+  +  A+ F E D  +   ++  N E  
Sbjct: 79  LLSRTERDKLMQTVAHVFDG-KLNILVNNAGVVIHKEAKDFTEKDYNI---IMGTNFEAA 134
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
             ++Q   P +   + G ++ + S A     + P  S+Y+A+K  I+Q ++SL  E+ K 
Sbjct: 135 YHLSQIAYPLLKASQNGNVIFLSSIAG--FSALPSVSLYSASKGAINQMTKSLACEWAKD 192
Query: 230 GIDVQ 234
            I V 
Sbjct: 193 NIRVN 197

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 82/179 (45%), Gaps = 21/179 (11%)
Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           LV   + GIG++ A  L++ G  + +  RN + LK           ++  + VV D   D
Sbjct: 23  LVLAASRGIGRAVADVLSQEGAEVTICARNEELLK-----------RSGHRYVVCDLRKD 71
Query: 117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAV 176
           LD   E++KE      V +L+ N G   P A FF E+     K  I        K+ +  
Sbjct: 72  LDLLFEKVKE------VDILVLNAG--GPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNY 123
Query: 177 LPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
           LP M ++  G IV I S  +++ P + LY+  +A  A +  F ++L  E    GI V C
Sbjct: 124 LPAMKEKGWGRIVAITS-FSVISPIENLYTSNSARMA-LTGFLKTLSFEVAPYGITVNC 180

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 7/181 (3%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVT  TDGIG + A +LA+ G ++V+  R  + +     ++Q +          V  + 
Sbjct: 17  ALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAE 76
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
           D +  V        G+D  +L++N  ++  +       ++V  K ++ VNV+ T  +T+A
Sbjct: 77  DRERLVAMAVNLHGGVD--ILVSNAAVNPFFGNIIDATEEVWDK-ILHVNVKATVLMTKA 133
Query: 176 VLPGMLKRKKGAIVNIGS-GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQ 234
           V+P M KR  G+++ + S GA    P+   Y+V   +K  +   +++L VE     I V 
Sbjct: 134 VVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNV---SKTALLGLTKNLAVELAPRNIRVN 190
Query: 235 C 235
           C
Sbjct: 191 C 191

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 85/194 (43%), Gaps = 38/194 (19%)
Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQA--------------KYA 102
           L+TG + GIG+  A +L   G  ++L  R   +++ ++  I+               +++
Sbjct: 8   LITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHS 67
Query: 103 KTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLI 162
                   VD  G +D                VL+NN G+         +VD+   + +I
Sbjct: 68  VAAFAQAAVDTWGRID----------------VLVNNAGVMPLSPLAAVKVDE--WERMI 109
Query: 163 KVNVEGTTKVTQAVLPGMLKRKKGAIVNIGS-GAAIVIPSDPLYSVYAATKAYIDQFSRS 221
            VN++G      AVLP M  ++ G I+NIGS GA  V+P+    +VY ATK  +   S  
Sbjct: 110 DVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPT---AAVYCATKFAVRAISDG 166
Query: 222 LYVEYRKSGIDVQC 235
           L  E   + I V C
Sbjct: 167 LRQE--STNIRVTC 178

>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 78/167 (46%), Gaps = 19/167 (11%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG + GIG + A  LA  G +++L G  P     V   I A     Q      +
Sbjct: 33  GRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQ------E 86
Query: 113 FSGDLDEG------VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNV 166
            +GDL E       +ER  EAI  +D+ V+  +  I+   +          L   + VN+
Sbjct: 87  LAGDLSEAGAGTDLIER-AEAIAPVDILVINASAQINATLSALTPND----LAFQLAVNL 141
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKA 213
             T  + Q+ LP M+ RK G +V+IGS   +   S  + + YAATKA
Sbjct: 142 GSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKS--VVTAYAATKA 186

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 27/189 (14%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKY-------AKTQ 105
           G  +L+TG + GIG + A  L K G  +++ G N +KLK + ++++  Y       A  +
Sbjct: 14  GKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKE 73
Query: 106 IKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVN 165
             S ++  + +LD                +L+ N GI+        + DQ   K +I +N
Sbjct: 74  ECSNLISKTSNLD----------------ILVCNAGITSDTLAIRMK-DQDFDK-VIDIN 115
Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
           ++    + +  +  M++++ G I+NI S   + I  +P  + Y A+KA +   ++SL  E
Sbjct: 116 LKANFILNREAIKKMIQKRYGRIINISS--IVGIAGNPGQANYCASKAGLIGMTKSLSYE 173
Query: 226 YRKSGIDVQ 234
               GI V 
Sbjct: 174 VATRGITVN 182

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 16/153 (10%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR--NPD-------KLKDVSDSIQ--AKY 101
           G  AL+TG   G+G+S A  LA+ G ++ +  R  N D          D+++++    K 
Sbjct: 10  GKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT 69
Query: 102 AKTQIKSVV-VDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKN 160
            +  I + V V     L+  V   ++ + G+D+   I N GIS        EV+      
Sbjct: 70  GRRCISAKVDVKDRAALESFVAEAEDTLGGIDIA--ITNAGIST--IALLPEVESAQWDE 125
Query: 161 LIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGS 193
           +I  N+ GT     AV PGM+KR  G IV + S
Sbjct: 126 VIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSS 158

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 92/188 (48%), Gaps = 18/188 (9%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKS--VV 110
           G  ALVTG + GIG + A   AK G  +V      D  +++ D   A Y    I +   V
Sbjct: 34  GKIALVTGASYGIGFAIASAYAKAGATIVF----NDINQELVDRGMAAYKAAGINAHGYV 89
Query: 111 VDFSGDLDEGVERIKEAIEGLDVGV---LINNVGISYPYARFFHEVDQVLLKNLIKVNVE 167
            D + +  +G++ +   IE  +VG+   L+NN GI         E+     + +I +++ 
Sbjct: 90  CDVTDE--DGIQAMVAQIES-EVGIIDILVNNAGIIRRVPMI--EMTAAQFRQVIDIDLN 144
Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
               V++AV+P M+K+  G I+NI S  + +       S YAA K  +   ++++  EY 
Sbjct: 145 APFIVSKAVIPSMIKKGHGKIINICSMMSEL--GRETVSAYAAAKGGLKMLTKNIASEYG 202
Query: 228 KSGIDVQC 235
           ++  ++QC
Sbjct: 203 EA--NIQC 208

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 92/184 (50%), Gaps = 15/184 (8%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSD-SIQAKYAKTQIKSVVVDFS 114
           A VTG   G+G + + +L   G+ + +   + ++   VS   +  + A    K+  VD +
Sbjct: 28  AFVTGGMGGLGAAISRRLHDAGMAVAV--SHSERNDHVSTWLMHERDAGRDFKAYAVDVA 85
Query: 115 GDLDEGVERIKEAI--EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
            D  E  ER  E +  +   V VLINN GI+      F ++ +     +++ +++    V
Sbjct: 86  -DF-ESCERCAEKVLADFGKVDVLINNAGITRDAT--FMKMTKGDWDAVMRTDLDAMFNV 141
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY--SVYAATKAYIDQFSRSLYVEYRKSG 230
           T+  + GM++R+ G IVNIGS    V  S   +  + YA+ KA I  F+++L +E  K G
Sbjct: 142 TKQFIAGMVERRFGRIVNIGS----VNGSRGAFGQANYASAKAGIHGFTKTLALETAKRG 197
Query: 231 IDVQ 234
           I V 
Sbjct: 198 ITVN 201

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 15/182 (8%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G   LVTG   GIG+     L  TG  +V V R    L    DS+  +     I+ V VD
Sbjct: 7   GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADL----DSLVRECPG--IEPVCVD 60
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
             GD  E  ER   ++  +D  +L+NN  ++    + F EV +       +VN+    +V
Sbjct: 61  L-GDW-EATERALGSVGPVD--LLVNNAAVA--LLQPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 173 TQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           +Q V  G++ R   GAIVN+ S  +    ++  +SVY +TK  +D  ++ + +E     I
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQCSQRAVTN--HSVYCSTKGALDMLTKVMALELGPHKI 172
Query: 232 DV 233
            V
Sbjct: 173 RV 174

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 15/182 (8%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G   LVTG   GIG+     L  TG  +V V R    L    DS+  +     I+ V VD
Sbjct: 7   GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADL----DSLVRECPG--IEPVCVD 60
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
             GD  E  ER   ++  +D  +L+NN  ++    + F EV +       +VN+    +V
Sbjct: 61  L-GDW-EATERALGSVGPVD--LLVNNAAVA--LLQPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 173 TQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           +Q V  G++ R   GAIVN+ S  +    ++  +SVY +TK  +D  ++ + +E     I
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQXSQRAVTN--HSVYCSTKGALDMLTKVMALELGPHKI 172
Query: 232 DV 233
            V
Sbjct: 173 RV 174

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 18/185 (9%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQA-KYAKTQIKSVVVDFS 114
           ALVTG   GIG+  A  LAK+  +++ + R       V D I++  Y  +        ++
Sbjct: 47  ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESS-------GYA 99
Query: 115 GDLDEGVERIKEAI-----EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
           GD+ +  E I E I     E  +V +L+NN GI+      F  +     +++++ N+   
Sbjct: 100 GDVSKK-EEISEVINKILTEHKNVDILVNNAGITRD--NLFLRMKNDEWEDVLRTNLNSL 156
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
             +TQ +   M+  + G I+NI S   + +  +   + Y+++KA +  F++SL  E    
Sbjct: 157 FYITQPISKRMINNRYGRIINISS--IVGLTGNVGQANYSSSKAGVIGFTKSLAKELASR 214
Query: 230 GIDVQ 234
            I V 
Sbjct: 215 NITVN 219

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 91/194 (46%), Gaps = 26/194 (13%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG T GIG   A  LA+ G N+VL G       D + ++ A+ A+  +K+  V 
Sbjct: 4   GKTALVTGSTSGIGLGIAQVLARAGANIVLNG-----FGDPAPAL-AEIARHGVKA--VH 55
Query: 113 FSGDLDEGVERIKEAIEGL------DVGVLINNVGISY--PYARFFHEVDQVLLKNLIKV 164
              DL + V +I EA+  L       V +L+NN GI +  P  +F  E        +I +
Sbjct: 56  HPADLSD-VAQI-EALFALAEREFGGVDILVNNAGIQHVAPVEQFPLES----WDKIIAL 109
Query: 165 NVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYV 224
           N+      T+  LPGM  R  G I+NI S   +V  +    + Y A K  +   ++ + +
Sbjct: 110 NLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTG--KAAYVAAKHGVVGLTKVVGL 167
Query: 225 EYRKSGIDVQCQVL 238
           E   S  +V C  +
Sbjct: 168 ETATS--NVTCNAI 179

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 50  RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSV 109
           R  G  ALVTG   GIGK+ A +LA  G  +++   N +  K  + SI  K      +++
Sbjct: 3   RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKA-----RAI 57
Query: 110 VVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVE 167
             D S  G +      I+    G+D  +L+NN  I  P+   + +VD    + +I VN+ 
Sbjct: 58  AADISDPGSVKALFAEIQALTGGID--ILVNNASI-VPFVA-WDDVDLDHWRKIIDVNLT 113
Query: 168 GTTKVTQAVLPGM-LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
           GT  VT+A    M    K G +++I S         P  + Y A K  +  F+R+L  E 
Sbjct: 114 GTFIVTRAGTDQMRAAGKAGRVISIASN--TFFAGTPNMAAYVAAKGGVIGFTRALATEL 171
Query: 227 RK 228
            K
Sbjct: 172 GK 173

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 85/190 (44%), Gaps = 26/190 (13%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVV 111
           G  A+VTG T GIG   A  LA  G ++VL G  +  +++ V   + A++       V V
Sbjct: 4   GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH------GVKV 57
Query: 112 DFSG-DLDEGVERIKEAIEGL---------DVGVLINNVGISYPYARFFHEVDQVLLKNL 161
            + G DL +G     EA+ GL          + +L+NN GI +       +        +
Sbjct: 58  LYDGADLSKG-----EAVRGLVDNAVRQMGRIDILVNNAGIQHTA--LIEDFPTEKWDAI 110
Query: 162 IKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRS 221
           + +N+      T A LP M K+  G I+NI S   +V  ++   S Y A K  +  F++ 
Sbjct: 111 LALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANK--SAYVAAKHGVVGFTKV 168
Query: 222 LYVEYRKSGI 231
             +E    GI
Sbjct: 169 TALETAGQGI 178

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 85/190 (44%), Gaps = 26/190 (13%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVV 111
           G  A+VTG T GIG   A  LA  G ++VL G  +  +++ V   + A++       V V
Sbjct: 4   GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH------GVKV 57
Query: 112 DFSG-DLDEGVERIKEAIEGL---------DVGVLINNVGISYPYARFFHEVDQVLLKNL 161
            + G DL +G     EA+ GL          + +L+NN GI +       +        +
Sbjct: 58  LYDGADLSKG-----EAVRGLVDNAVRQMGRIDILVNNAGIQHTA--LIEDFPTEKWDAI 110
Query: 162 IKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRS 221
           + +N+      T A LP M K+  G I+NI S   +V  ++   S Y A K  +  F++ 
Sbjct: 111 LALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANK--SAYVAAKHGVVGFTKV 168
Query: 222 LYVEYRKSGI 231
             +E    GI
Sbjct: 169 TALETAGQGI 178

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 85/190 (44%), Gaps = 26/190 (13%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVV 111
           G  A+VTG T GIG   A  LA  G ++VL G  +  +++ V   + A++       V V
Sbjct: 4   GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH------GVKV 57
Query: 112 DFSG-DLDEGVERIKEAIEGL---------DVGVLINNVGISYPYARFFHEVDQVLLKNL 161
            + G DL +G     EA+ GL          + +L+NN GI +       +        +
Sbjct: 58  LYDGADLSKG-----EAVRGLVDNAVRQMGRIDILVNNAGIQHTA--LIEDFPTEKWDAI 110
Query: 162 IKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRS 221
           + +N+      T A LP M K+  G I+NI S   +V  ++   S Y A K  +  F++ 
Sbjct: 111 LALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANK--SAYVAAKHGVVGFTKV 168
Query: 222 LYVEYRKSGI 231
             +E    GI
Sbjct: 169 TALETAGQGI 178

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           LVTG T GIG +   + A  G  +    RN  +L +     Q K    Q+   V D S  
Sbjct: 18  LVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDAS-- 73
Query: 117 LDEGVERIKEAIEGLDVG---VLINNVG-------ISYPYARF-FHEVDQVLLKNLIKVN 165
           L    E++ + +  +  G   +LINN+G       + Y    F FH          I  N
Sbjct: 74  LRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFH----------ISTN 123
Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
           +E    ++Q   P +     G I+ + S A +V  S  + S+Y+ATK  ++Q +R+L  E
Sbjct: 124 LESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV--SASVGSIYSATKGALNQLARNLACE 181
Query: 226 YRKSGI 231
           +   GI
Sbjct: 182 WASDGI 187

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 8/178 (4%)
Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           +++G    +G + A + A+ G +LVL  R  ++L+DV+   Q      +  SV  D + D
Sbjct: 15  VISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAK--QVTDTGRRALSVGTDITDD 72
Query: 117 LDEGVERIKEAIEGLD-VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
             +    + E ++    V V+INN     P  + F       +++ I++ V G  ++ Q 
Sbjct: 73  A-QVAHLVDETMKAYGRVDVVINNA-FRVPSMKPFANTTFEHMRDAIELTVFGALRLIQG 130
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
             P  L+  KGA+VN+ S   +V  S   Y  Y   K+ +   S++L  E  + GI V
Sbjct: 131 FTPA-LEESKGAVVNVNS--MVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRV 185

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 17/184 (9%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVTG   GIGK+ A +L K G  + +   N    K V+  I    A     +V VD S 
Sbjct: 5   ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEIN--QAGGHAVAVKVDVS- 61
Query: 116 DLDE---GVERIKEAIEGLDVGVLINNVGI--SYPYARFFHEVDQVLLKNLIKVNVEGTT 170
           D D+    VE+ ++ + G D  V++NN G+  S P      E+    +  +  +NV+G  
Sbjct: 62  DRDQVFAAVEQARKTLGGFD--VIVNNAGVAPSTPIESITPEI----VDKVYNINVKGVI 115
Query: 171 KVTQAVLPGMLKRKKGA-IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
              QA +    K   G  I+N  S A  V   +P  +VY+++K  +   +++   +    
Sbjct: 116 WGIQAAVEAFKKEGHGGKIINACSQAGHV--GNPELAVYSSSKFAVRGLTQTAARDLAPL 173
Query: 230 GIDV 233
           GI V
Sbjct: 174 GITV 177

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 79/184 (42%), Gaps = 7/184 (3%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG   G+G ++A  LA  G  ++L       L +  D++  K        V  D
Sbjct: 9   GKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK--GYDAHGVAFD 66
Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
            + +L       K   EG+ V +LINN GI Y       E++    + +I  N+     V
Sbjct: 67  VTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELEN--WQKVIDTNLTSAFLV 124
Query: 173 TQAVLPGMLKRKKGA-IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           +++    M+ R  G  I+NIGS  +    + P  + Y A K  I   + S+  E+ +  I
Sbjct: 125 SRSAAKRMIARNSGGKIINIGSLTSQA--ARPTVAPYTAAKGGIKMLTCSMAAEWAQFNI 182
Query: 232 DVQC 235
Sbjct: 183 QTNA 186

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 80/175 (45%), Gaps = 16/175 (9%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            +VTG   GIG+++A  LA+ G  +V+   N +  + V+  I A    T I SV VD S 
Sbjct: 12  GIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD-GGTAI-SVAVDVS- 68
Query: 116 DLDEG---VERIKEAIEGLDVGVLINNVGI-SYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
           D +      +R      G+D   L+NN  I       F   +D    K  + VN++G   
Sbjct: 69  DPESAKAMADRTLAEFGGIDY--LVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALW 126
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS-VYAATKAYIDQFSRSLYVE 225
            T+AV   M KR  GAIVN  S AA       LYS  Y   K  I+  ++ L  E
Sbjct: 127 CTRAVYKKMTKRGGGAIVNQSSTAAW------LYSNYYGLAKVGINGLTQQLSRE 175

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 97/194 (50%), Gaps = 32/194 (16%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           AL+TG + GIG++ A +LA+ G  L +  G+N +K ++V++  + + +      +V    
Sbjct: 4   ALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGS-----PLVAVLG 58
Query: 115 GDLDEG------VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NL 161
            +L E       V +  E + GLD   L+NN GI+          D +L++        +
Sbjct: 59  ANLLEAEAATALVHQAAEVLGGLD--TLVNNAGITR---------DTLLVRMKDEDWEAV 107
Query: 162 IKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRS 221
           ++ N+    + T+  +  M+K + G IVNI S   + I  +P  + Y A+KA +  F+R+
Sbjct: 108 LEANLSAVFRTTREAVKLMMKARFGRIVNITS--VVGILGNPGQANYVASKAGLIGFTRA 165
Query: 222 LYVEYRKSGIDVQC 235
           +  EY + GI V  
Sbjct: 166 VAKEYAQRGITVNA 179

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 88/210 (41%), Gaps = 22/210 (10%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  A VTG  +G+G     QL   G  + +     D +     +++A+ +  ++  V +D
Sbjct: 8   GRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLD 67
Query: 113 FSGDLDEGVERIKEAIEGL--DVGVLINNVGISYPYARFFHEVDQVLLKN---LIKVNVE 167
            +    EG +   + +E     V +L NN G++      F  +++    +   L+ VN+ 
Sbjct: 68  VAS--REGFKMAADEVEARFGPVSILCNNAGVN-----LFQPIEESSYDDWDWLLGVNLH 120
Query: 168 GTTKVTQAVLPGMLKR------KKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRS 221
           G        +P M++R      K G +VN  S AA +    P   +Y  TK  +   S S
Sbjct: 121 GVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSP--GIYNTTKFAVRGLSES 178
Query: 222 LYVEYRKS--GIDVQCQVLFLLCFYNLNDL 249
           L+    K   G+ V C  L     Y  +D+
Sbjct: 179 LHYSLLKYEIGVSVLCPGLVKSYIYASDDI 208

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 10/181 (5%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVTG + GIG   A  LA  G  +V    +    +   +S + K  K   + +V++ S 
Sbjct: 8   ALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSXKEKGFKA--RGLVLNIS- 64
Query: 116 DLDEGVERIKEAI--EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
           D+ E ++     I  E L + +L+NN GI+          D+   +++I  N+    + +
Sbjct: 65  DI-ESIQNFFAEIKAENLAIDILVNNAGITRDNLXXRXSEDE--WQSVINTNLSSIFRXS 121
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           +  + G  K++ G I++IGS   +    +P  + Y A KA +  FS+SL  E     I V
Sbjct: 122 KECVRGXXKKRWGRIISIGS--VVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITV 179
Query: 234 Q 234
Sbjct: 180 N 180

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 11/180 (6%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A++TG T GIG + A +    G  + + GR  D L      I       Q  S  +    
Sbjct: 32  AVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANL---A 88
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
           +LD   E++K     +DV  +    G   P      EV +    +    NV+G     Q 
Sbjct: 89  ELDRLYEKVKAEAGRIDVLFVNAGGGSXLP----LGEVTEEQYDDTFDRNVKGVLFTVQK 144
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
            LP +L R   ++V  GS A       P +SVYAA+KA +  F+R+  ++ +  GI +  
Sbjct: 145 ALP-LLARGS-SVVLTGSTAGST--GTPAFSVYAASKAALRSFARNWILDLKDRGIRINT 200

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 91/185 (49%), Gaps = 14/185 (7%)
Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF--- 113
           LVTG +DGIG+  A   A+ G  ++L+GRN +KL+ V+  I A     Q +   +D    
Sbjct: 19  LVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHI-ADEQHVQPQWFTLDLLTC 77
Query: 114 -SGDLDEGVERIKEAIEGLDVGVLINN--VGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
            + +  +  +RI      LD GVL N   +G   P +    E D  + +++ +VNV  T 
Sbjct: 78  TAEECRQVADRIAAHYPRLD-GVLHNAGLLGEIGPXS----EQDPQIWQDVXQVNVNATF 132
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
            +TQA+LP +LK   G++V   S       ++  +  YA +K   +   + L  EY+   
Sbjct: 133 XLTQALLPLLLKSDAGSLVFTSSSVGRQGRAN--WGAYATSKFATEGXXQVLADEYQNRS 190
Query: 231 IDVQC 235
           + V C
Sbjct: 191 LRVNC 195

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 88/191 (46%), Gaps = 27/191 (14%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF-- 113
           A VTG   GIG S   +L K G  +V  G  P+  + V      K+ + Q K++  DF  
Sbjct: 16  AYVTGGMGGIGTSICQRLHKDGFRVV-AGCGPNSPRRV------KWLEDQ-KALGFDFYA 67
Query: 114 ----SGDLD---EGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNV 166
                GD D   +  +++K  +  +DV  L+NN GI+      F ++ +   + +I  N+
Sbjct: 68  SEGNVGDWDSTKQAFDKVKAEVGEIDV--LVNNAGITRDV--VFRKMTREDWQAVIDTNL 123
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY--SVYAATKAYIDQFSRSLYV 224
                VT+ V+ GM++R  G I+NI S    V      +  + Y+  KA I  F+ SL  
Sbjct: 124 TSLFNVTKQVIDGMVERGWGRIINISS----VNGQKGQFGQTNYSTAKAGIHGFTMSLAQ 179
Query: 225 EYRKSGIDVQC 235
           E    G+ V  
Sbjct: 180 EVATKGVTVNT 190

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 85/194 (43%), Gaps = 32/194 (16%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVTG + GIG++ A  L   G  + +  RNP+   + + S+ A    T       D   
Sbjct: 5   ALVTGGSRGIGRAIAEALVARGYRVAIASRNPE---EAAQSLGAVPLPT-------DLEK 54
Query: 116 DLDEG-VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
           D  +G V+R  EA+ GL V V    V +  P     +E      + ++ ++++    + Q
Sbjct: 55  DDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEE----WRRVLYLHLDVAFLLAQ 110
Query: 175 AVLPGMLKRKKGAIVNIGS------GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
           A  P M +   G ++ IGS      G  + IP+      Y   K  +   +R+L  E+ +
Sbjct: 111 AAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPA------YTTAKTALLGLTRALAKEWAR 164
Query: 229 SGIDVQCQVLFLLC 242
            GI V      LLC
Sbjct: 165 LGIRVN-----LLC 173

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 49  LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVL---------VGRNPDKLKDVSDSIQA 99
           LR  G   LVTG   G+G+++A   A+ G  +V+         VG+       V + I+ 
Sbjct: 26  LRFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRR 85
Query: 100 KYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD-VGVLINNVGI--SYPYARFFHEVDQV 156
           +  K      V ++   ++EG + +K A++    + V++NN GI     +AR   E   +
Sbjct: 86  RGGK-----AVANYD-SVEEGEKVVKTALDAFGRIDVVVNNAGILRDRSFARISDEDWDI 139
Query: 157 LLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYID 216
           +     +V++ G+ +VT+A    M K+K G I+   S + I    +   + Y+A K  + 
Sbjct: 140 IH----RVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIY--GNFGQANYSAAKLGLL 193
Query: 217 QFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLVM 251
             + SL +E RKS  ++ C  +       +   VM
Sbjct: 194 GLANSLAIEGRKS--NIHCNTIAPNAGSRMTQTVM 226

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 26/189 (13%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIK-------S 108
           A++TG  +GIG++ A + A  G ++            ++D + A  A+  I+       +
Sbjct: 10  AVITGGANGIGRAIAERFAVEGADIA-----------IADLVPAPEAEAAIRNLGRRVLT 58
Query: 109 VVVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNV 166
           V  D S  GD++   +++       D+  L+NN GI YP   F  E+     K   ++NV
Sbjct: 59  VKCDVSQPGDVEAFGKQVISTFGRCDI--LVNNAGI-YPLIPF-DELTFEQWKKTFEINV 114
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
           +    + +A +PGM +   G I+N+ S    +      Y+ Y +TKA    F+R+L  + 
Sbjct: 115 DSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL--KIEAYTHYISTKAANIGFTRALASDL 172
Query: 227 RKSGIDVQC 235
            K GI V  
Sbjct: 173 GKDGITVNA 181

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 75/192 (39%), Gaps = 10/192 (5%)
Query: 45  PAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD-VSDSIQAKYAK 103
           P       G   +VTG T GIG+  A   A+ G N+ + GR+   +   V+D  Q    K
Sbjct: 2   PGSMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGK 61
Query: 104 TQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGI--SYPYARFFHEVDQVLLKNL 161
                  V      D    R  E   G+D  V+  N G+    P A    E     L  +
Sbjct: 62  VIGVQTDVSDRAQCDALAGRAVEEFGGID--VVCANAGVFPDAPLATMTPE----QLNGI 115
Query: 162 IKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRS 221
             VNV GT    QA L  ++    G +V + S     I   P +S Y ATKA    F R+
Sbjct: 116 FAVNVNGTFYAVQACLDALIASGSGRVV-LTSSITGPITGYPGWSHYGATKAAQLGFMRT 174
Query: 222 LYVEYRKSGIDV 233
             +E     I V
Sbjct: 175 AAIELAPHKITV 186

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 83/182 (45%), Gaps = 14/182 (7%)
Query: 50  RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSV 109
           R  G  ALVTG   GIGK+ A +LA  G  +++   N +  K  + SI  K      +++
Sbjct: 3   RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKA-----RAI 57
Query: 110 VVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVE 167
             D S  G +      I+    G+D  +L+NN  I  P+   + +VD    + +I VN+ 
Sbjct: 58  AADISDPGSVKALFAEIQALTGGID--ILVNNASI-VPFVA-WDDVDLDHWRKIIDVNLT 113
Query: 168 GTTKVTQA-VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
           GT  VT+A         K G +++I S         P  + Y A K  +  F+R+L  E 
Sbjct: 114 GTFIVTRAGTDQXRAAGKAGRVISIASN--TFFAGTPNXAAYVAAKGGVIGFTRALATEL 171
Query: 227 RK 228
            K
Sbjct: 172 GK 173

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 81/182 (44%), Gaps = 11/182 (6%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVL--VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF 113
           A+VTG + GIG + A +LA  G  +V+   G+     ++V+  I+A   K       V  
Sbjct: 30  AIVTGASRGIGAAIAARLASDGFTVVINYAGKAA-AAEEVAGKIEAAGGKALTAQADVSD 88
Query: 114 SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              +       +EA  G+D  VL+NN GI  P        D V  + +I VN++GT    
Sbjct: 89  PAAVRRLFATAEEAFGGVD--VLVNNAGIX-PLTTIAETGDAVFDR-VIAVNLKGTFNTL 144
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           +     +  R  G I+N  +    ++   P Y +YAA KA ++  +  L  E R   I V
Sbjct: 145 REAAQRL--RVGGRIINXSTSQVGLL--HPSYGIYAAAKAGVEAXTHVLSKELRGRDITV 200
Query: 234 QC 235
Sbjct: 201 NA 202

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 9/179 (5%)
Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           +VTG   GIG++ A   AK G  +V+   N D    V++ I +K    ++    V  + D
Sbjct: 31  IVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVD---VSSAKD 87
Query: 117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAV 176
            +  VE+       +D  VL+NN G  +        + +     +  VNV+G    ++ V
Sbjct: 88  AESXVEKTTAKWGRVD--VLVNNAG--FGTTGNVVTIPEETWDRIXSVNVKGIFLCSKYV 143
Query: 177 LPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
           +P   +   G+I+N  S  A    +D   + Y A+K  I   +R+   ++ K GI V  
Sbjct: 144 IPVXRRNGGGSIINTTSYTATSAIAD--RTAYVASKGAISSLTRAXAXDHAKEGIRVNA 200

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 10/188 (5%)
Query: 49  LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKS 108
           +R  G  AL+TG   GIG++FA    + G  + +   N +  +  +  I    A   I  
Sbjct: 1   MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGP--AACAIAL 58
Query: 109 VVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
            V D    +D  V  + +    +D  +L+NN  + +  A    E+ +     L  +NV G
Sbjct: 59  DVTD-QASIDRCVAELLDRWGSID--ILVNNAAL-FDLAPIV-EITRESYDRLFAINVSG 113
Query: 169 TTKVTQAVLPGMLKRKKGA-IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
           T  + QAV   M+   +G  I+N+ S A      + L  VY ATKA +   ++S  +   
Sbjct: 114 TLFMMQAVARAMIAGGRGGKIINMASQAG--RRGEALVGVYCATKAAVISLTQSAGLNLI 171
Query: 228 KSGIDVQC 235
           + GI+V  
Sbjct: 172 RHGINVNA 179

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 85/187 (45%), Gaps = 16/187 (8%)
Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           LVTG + GIG +     A+ G     VG N    ++ +D++ A  A T+     V   GD
Sbjct: 30  LVTGGSRGIGAAVCRLAARQGWR---VGVNYAANREAADAVVA--AITESGGEAVAIPGD 84
Query: 117 LDEGVERIKEAIEGLD-----VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT- 170
           +    + I      +D     +  L+NN GI   Y +   E     ++  ++VNV G+  
Sbjct: 85  VGNAAD-IAAXFSAVDRQFGRLDGLVNNAGI-VDYPQRVDEXSVERIERXLRVNVTGSIL 142
Query: 171 KVTQAV--LPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
              +AV     +   + GAIVN+ S AAI + S   Y  YAA+KA ID F+  L  E   
Sbjct: 143 CAAEAVRRXSRLYSGQGGAIVNVSSXAAI-LGSATQYVDYAASKAAIDTFTIGLAREVAA 201
Query: 229 SGIDVQC 235
            GI V  
Sbjct: 202 EGIRVNA 208

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 81/182 (44%), Gaps = 19/182 (10%)
Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG- 115
           +VTG   GIG++ A + A     +V V    D+L  +   ++      ++  V  D S  
Sbjct: 11  IVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRG--MGKEVLGVKADVSKK 68
Query: 116 -DLDEGVERIKEAIEGLDVGVLINNVGIS---YPYARFFHEVDQVLLKNLIKVNVEGTTK 171
            D++E V R  E    +DV  L NN GI     P A    EV   L + ++ VN+     
Sbjct: 69  KDVEEFVRRTFETYSRIDV--LCNNAGIMDGVTPVA----EVSDELWERVLAVNLYSAFY 122
Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIV--IPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
            ++AV+P MLK+ KG IVN  S A I       P    Y   K  +   +RS+   Y   
Sbjct: 123 SSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAP----YTVAKHGLIGLTRSIAAHYGDQ 178
Query: 230 GI 231
           GI
Sbjct: 179 GI 180

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 20/177 (11%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G   LVTG   GIG++ A   A+ G  + L    P+  K+V+++I   +           
Sbjct: 6   GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGGAF----------- 53
Query: 113 FSGDLDEGVERIK---EAIEGLD-VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
           F  DL++  ER++   EA   L  V VL+NN  I+ P +     + +   + +++VN+  
Sbjct: 54  FQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPE--WRRVLEVNLTA 111
Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
              ++      M K   GAIVN+ S   +    +   + Y A+K  +   +RSL ++
Sbjct: 112 PMHLSALAAREMRKVGGGAIVNVASVQGLFAEQE--NAAYNASKGGLVNLTRSLALD 166

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 15/185 (8%)
Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF--- 113
           LVTG +DGIG+  A   A+ G  ++L+GRN +KL+ V+  I  +  + Q +  ++D    
Sbjct: 16  LVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGR-QPQWFILDLLTC 74
Query: 114 -SGDLDEGVERIKEAIEGLDVGVLINN--VGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
            S +  +  +RI      LD GVL N   +G   P +    E +  + +++ +VNV  T 
Sbjct: 75  TSENCQQLAQRIAVNYPRLD-GVLHNAGLLGDVCPXS----EQNPQVWQDVXQVNVNATF 129
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
            +TQA+LP +LK   G++V   S       ++  +  YAA+K   +   + L  EY++  
Sbjct: 130 XLTQALLPLLLKSDAGSLVFTSSSVGRQGRAN--WGAYAASKFATEGXXQVLADEYQQR- 186
Query: 231 IDVQC 235
           + V C
Sbjct: 187 LRVNC 191

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 79/184 (42%), Gaps = 19/184 (10%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  A+VTG   GIG + A +LA  G +++    + D     +  I    A  +     VD
Sbjct: 29  GKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACR-----VD 83
Query: 113 FSGDLDEG-----VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVE 167
            S   DE      V+    A  G+D   L+ N G+ +  +     V+      +I +N+ 
Sbjct: 84  VS---DEQQIIAMVDACVAAFGGVDK--LVANAGVVHLASLIDTTVED--FDRVIAINLR 136
Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
           G    T+   P M++R  GAIVN+ S A  V         Y  +KA I Q SR    E R
Sbjct: 137 GAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGG--TGAYGMSKAGIIQLSRITAAELR 194
Query: 228 KSGI 231
            SGI
Sbjct: 195 SSGI 198

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 27/193 (13%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKT-------- 104
           G  AL+TG + GIGK  A   A+ G  + +  R+ D L+ V+D I     K         
Sbjct: 32  GKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVT 91
Query: 105 ---QIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNL 161
              Q++ ++   +G+L            G+D+ V   N GI    A     +++   + +
Sbjct: 92  QPDQVRGMLDQMTGELG-----------GIDIAVC--NAGIVSVQAMLDMPLEE--FQRI 136
Query: 162 IKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSR 220
              NV G     QA    M+ +   G I+   S +  +I      S Y  +KA +   ++
Sbjct: 137 QDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTK 196
Query: 221 SLYVEYRKSGIDV 233
           ++ VE     I V
Sbjct: 197 AMAVELAPHQIRV 209

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A VTG + GIG + A  LA  G+ +    R+   +    D ++A        S  V  + 
Sbjct: 27  AFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTD 86
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
           ++   V    E      +G+L+N+ G +        ++D  L  +++  N+ G  +VT+ 
Sbjct: 87  EVHAAVAAAVERFG--PIGILVNSAGRN--GGGETADLDDALWADVLDTNLTGVFRVTRE 142
Query: 176 VL--PGMLKRKKGAIVNIGS--GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           VL   GM +   G IVNI S  G   V+ + P    Y A+K  +  F++S+  E  K+GI
Sbjct: 143 VLRAGGMREAGWGRIVNIASTGGKQGVMYAAP----YTASKHGVVGFTKSVGFELAKTGI 198
Query: 232 DVQ 234
            V 
Sbjct: 199 TVN 201

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 11/184 (5%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  A+VTG   GIG + A + A+ G  LVL   +   L+   + ++ +        VV D
Sbjct: 31  GRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ--GFDAHGVVCD 88
Query: 113 FSGDLDEGVERIKEAIEGL-DVGVLINNVGI--SYPYARFFHEVDQVLLKNLIKVNVEGT 169
               LDE V    EA   L  V V+ +N GI  + P A+  H+      + +I +++ G+
Sbjct: 89  VR-HLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDD----WRWVIDIDLWGS 143
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
               +A LP +L++  G  +   +  A ++P+  L   Y   K  +   + +L  E + +
Sbjct: 144 IHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGL-GTYGVAKYGVVGLAETLAREVKPN 202
Query: 230 GIDV 233
           GI V
Sbjct: 203 GIGV 206

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 26/190 (13%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVV 111
           G  ALVTG   G+G++ A  LA  G  +V   R  PD+  D    I AK       ++++
Sbjct: 9   GRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLD----IIAKDGGNA-SALLI 63
Query: 112 DFSGDLDEGVERIKEAIEGLDVGVLINNVG-ISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
           DF+  L       K++       +L+NN G I    +  F E+D      ++ VN++   
Sbjct: 64  DFADPL-----AAKDSFTDAGFDILVNNAGIIRRADSVEFSELD---WDEVMDVNLKALF 115
Query: 171 KVTQAVLPGML-KRKKGAIVNIGS----GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
             TQA    +L K + G +VNI S       I +PS      Y A K  +   ++ L  E
Sbjct: 116 FTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPS------YTAAKHGVAGLTKLLANE 169
Query: 226 YRKSGIDVQC 235
           +   GI+V  
Sbjct: 170 WAAKGINVNA 179

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 12/177 (6%)
Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           ++TG + GIG++ A + ++ G  L+L+ R  ++LK ++         T    V V     
Sbjct: 20  VITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN------LPNTLCAQVDVTDKYT 73
Query: 117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAV 176
            D  + R ++     D   ++NN G+         E ++   + +  VNV G     QAV
Sbjct: 74  FDTAITRAEKIYGPAD--AIVNNAGMMLLGQIDTQEANE--WQRMFDVNVLGLLNGMQAV 129
Query: 177 LPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           L  M  R  G I+NI S A     + P ++ Y  TK  +   S ++  E   S + V
Sbjct: 130 LAPMKARNCGTIINISSIAG--KKTFPDHAAYCGTKFAVHAISENVREEVAASNVRV 184

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 10/184 (5%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQ-AKYAKTQIKSVVVDFS 114
           ALVTG + GIG + A  L + GL +V   R    +++++   + A Y  T I     D S
Sbjct: 35  ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIP-YRCDLS 93
Query: 115 GDLD--EGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
            + D       I+    G+D  + INN G++ P             K++  VNV   +  
Sbjct: 94  NEEDILSMFSAIRSQHSGVD--ICINNAGLARPDTLLSGSTSG--WKDMFNVNVLALSIC 149
Query: 173 TQAVLPGMLKRK--KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
           T+     M +R    G I+NI S +   +    +   Y+ATK  +   +  L  E R++ 
Sbjct: 150 TREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQ 209
Query: 231 IDVQ 234
             ++
Sbjct: 210 THIR 213

>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 95/185 (51%), Gaps = 15/185 (8%)
Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           LVTG +DGIG+  A   A+ G  ++L+GRN +KL+ V+  I  +  + Q +  ++D    
Sbjct: 37  LVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGR-QPQWFILDLLTC 95
Query: 117 LDEGVERIKEAI----EGLDVGVLINN--VGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
             E  +++ + I      LD GVL N   +G   P +    E +  + +++ ++NV  T 
Sbjct: 96  TSENCQQLAQRIVVNYPRLD-GVLHNAGLLGDVCPXS----EQNPQVWQDVXQINVNATF 150
Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
            +TQA+LP +LK   G++V   S       ++  +  YAA+K   +   + L  EY++  
Sbjct: 151 XLTQALLPLLLKSDAGSLVFTSSSVGRQGRAN--WGAYAASKFATEGXXQVLADEYQQR- 207
Query: 231 IDVQC 235
           + V C
Sbjct: 208 LRVNC 212

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 89/192 (46%), Gaps = 12/192 (6%)
Query: 44  RPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAK 103
           R A  LR  G  AL+TG T GIG   A   A  G  LVL GR+  +L     ++  ++  
Sbjct: 11  RYAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFG- 69
Query: 104 TQIKSVVVDFSGDLDE---GVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKN 160
           T + +V +D + + D       R  EA  GLD  VL+NN GIS+P      + D  L   
Sbjct: 70  TDVHTVAIDLA-EPDAPAELARRAAEAFGGLD--VLVNNAGISHPQPVV--DTDPQLFDA 124
Query: 161 LIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFS 219
            I VN+     +  AV   M+   + GAI+ + S AA+    D  +  Y  +KA +   +
Sbjct: 125 TIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPD--HYAYCTSKAGLVMAT 182
Query: 220 RSLYVEYRKSGI 231
           + L  E    GI
Sbjct: 183 KVLARELGPHGI 194

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 91/201 (45%), Gaps = 19/201 (9%)
Query: 46  AKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG------------RNPDKLKDV 93
           A+  R  G  A +TG   G G++ A +LA+ G ++V +              +P++LK+ 
Sbjct: 39  ARMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKET 98
Query: 94  SDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI-EGLDVGVLINNVGISYPYARFFHE 152
              ++ +  +   +   V    DL      + EA+ E   + +L++NVGIS         
Sbjct: 99  VRLVEEQGRRIIARQADVR---DLASLQAVVDEALAEFGHIDILVSNVGISN-QGEVVSL 154
Query: 153 VDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATK 212
            DQ    ++++ N+ G     +AVLP M++R +G  V I   + + +   P  S YAA+K
Sbjct: 155 TDQ-QWSDILQTNLIGAWHACRAVLPSMIERGQGGSV-IFVSSTVGLRGAPGQSHYAASK 212
Query: 213 AYIDQFSRSLYVEYRKSGIDV 233
             +     SL  E  +  I V
Sbjct: 213 HGVQGLMLSLANEVGRHNIRV 233

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 17/184 (9%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVTG   GIG++ A   A+ G + V +   P + +D +  ++A   +   K+V+    G
Sbjct: 52  ALVTGGDSGIGRAAAIAYAREGAD-VAINYLPAEEED-AQQVKALIEECGRKAVL--LPG 107
Query: 116 DL-DEG-----VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
           DL DE      V + +EA+ GLD+  L+     + P  +   ++     +    VNV   
Sbjct: 108 DLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIK---DLTSEQFQQTFAVNVFAL 164
Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
             +TQ  +P +    KGA +   S      PS  L   YAATKA I  +SR L  +  + 
Sbjct: 165 FWITQEAIPLL---PKGASIITTSSIQAYQPSPHLLD-YAATKAAILNYSRGLAKQVAEK 220
Query: 230 GIDV 233
           GI V
Sbjct: 221 GIRV 224

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 13/185 (7%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A++TG   GIG   +  LA+ G  +VL       L   + S+     +  +  VV D + 
Sbjct: 14  AIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV----GRGAVHHVV-DLTN 68
Query: 116 DLD--EGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
           ++     ++   +    LD+  + NN   S P      ++   +  +   VN  GT  + 
Sbjct: 69  EVSVRALIDFTIDTFGRLDI--VDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMC 126
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           +  +P ++    GAIVNI S  A    +  + + YA TKA I+  +R +  +Y + G  V
Sbjct: 127 KYAIPRLISAGGGAIVNISSATAHA--AYDMSTAYACTKAAIETLTRYVATQYGRHG--V 182
Query: 234 QCQVL 238
           +C  +
Sbjct: 183 RCNAI 187

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 49  LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIK- 107
           LR  G  A+VTG   G+G+ +A   A+ G  +V+         D +    A     +I+ 
Sbjct: 15  LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRK 74
Query: 108 ---SVVVDFSGDLDEGVERIKEAIEGLD-VGVLINNVGISYPYARFFHEVDQVLLK---- 159
                V D++  +D G + I+ AI+    V +L+NN GI           D+ L+K    
Sbjct: 75  AGGEAVADYNSVID-GAKVIETAIKAFGRVDILVNNAGILR---------DRSLVKTSEQ 124
Query: 160 --NLIK-VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAI 197
             NL+  V+++G+ K TQA  P M K+  G I+   S + I
Sbjct: 125 DWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGI 165

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 18/187 (9%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKY--AKTQIKSVV 110
           G   L+TG   GIG++ +   AK G N+ +       L +  D+ + K    K  +K V+
Sbjct: 47  GKNVLITGGDSGIGRAVSIAFAKEGANIAIA-----YLDEEGDANETKQYVEKEGVKCVL 101
Query: 111 VDFSGDL-DEGVER--IKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNV 166
               GDL DE   +  ++E +  L  + +L+NNV   YP     +   + L K   ++N+
Sbjct: 102 --LPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTF-RINI 158
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
                VT+A L  +   K+G ++ I + + +    +     Y+ATK  I  F+RSL    
Sbjct: 159 FSYFHVTKAALSHL---KQGDVI-INTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSL 214
Query: 227 RKSGIDV 233
            + GI V
Sbjct: 215 VQKGIRV 221

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 66/156 (42%), Gaps = 15/156 (9%)
Query: 46  AKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI-----QAK 100
           + NLR  G  A++TG   GIGK  A   A  G ++V+   N D    V D I     QA 
Sbjct: 4   SDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAF 63
Query: 101 YAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKN 160
             +  I S   + S   D  + ++ +      V +L+NN G   P        D    + 
Sbjct: 64  ACRCDITS-EQELSALADFAISKLGK------VDILVNNAGGGGPKPFDMPMAD---FRR 113
Query: 161 LIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA 196
             ++NV     ++Q V P M K   G I+ I S AA
Sbjct: 114 AYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAA 149

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 92/187 (49%), Gaps = 14/187 (7%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G   ++TG + G+GKS A + A     +V+  R+ +   D ++S+  +  K   +++ V 
Sbjct: 7   GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKE---DEANSVLEEIKKVGGEAIAV- 62
Query: 113 FSGDL---DEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
             GD+    + +  ++ AI+    + V+INN G+  P +   HE+       +I  N+ G
Sbjct: 63  -KGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSS--HEMSLSDWNKVIDTNLTG 119
Query: 169 TTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
               ++  +   ++   KG ++N+ S     IP  PL+  YAA+K  +   +++L +EY 
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSS-VHEKIPW-PLFVHYAASKGGMKLMTKTLALEYA 177
Query: 228 KSGIDVQ 234
             GI V 
Sbjct: 178 PKGIRVN 184

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 25/194 (12%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G   +VTG + GIG+  A QL K G  + + GR+ D L+ V+   +A+    Q   VV D
Sbjct: 5   GQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQ--EAQSLGGQCVPVVCD 62
Query: 113 FSGDLD-----EGVERIKEAIEGLDVGVLINNV-----GISYPYARFFHEVDQVLLKNLI 162
            S + +     E V+R ++      + VL+NN       I     + F E    +  ++ 
Sbjct: 63  SSQESEVRSLFEQVDREQQG----RLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDIN 118
Query: 163 KVNVEGT--TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV-YAATKAYIDQFS 219
            V + G     V  A L  M+   +G IV I S  ++      +++V Y   KA  D+ +
Sbjct: 119 NVGLRGHYFCSVYGARL--MVPAGQGLIVVISSPGSLQY----MFNVPYGVGKAACDKLA 172
Query: 220 RSLYVEYRKSGIDV 233
                E R+ G+  
Sbjct: 173 ADCAHELRRHGVSC 186

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 18/187 (9%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKY--AKTQIKSVV 110
           G   L+TG   GIG++ +   AK G N+ +       L +  D+ + K    K  +K V+
Sbjct: 47  GKNVLITGGDSGIGRAVSIAFAKEGANIAIA-----YLDEEGDANETKQYVEKEGVKCVL 101
Query: 111 VDFSGDL-DEGVER--IKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNV 166
               GDL DE   +  ++E +  L  + +L+NNV   YP     +   + L K   ++N+
Sbjct: 102 --LPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTF-RINI 158
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
                VT+A L  +   K+G ++ I + + +    +     Y+ATK  I  F+RSL    
Sbjct: 159 FSYFHVTKAALSHL---KQGDVI-INTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSL 214
Query: 227 RKSGIDV 233
            + GI V
Sbjct: 215 VQKGIRV 221

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           L+TG + GIG++ A  L   G  + L+ R+  +L+ ++  ++            V   GD
Sbjct: 9   LITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGD----VREEGD 64
Query: 117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAV 176
               V  ++EA    ++  L+NN G+     +  HE+     + ++  N+ G     +  
Sbjct: 65  WARAVAAMEEAFG--ELSALVNNAGVGV--MKPVHELTLEEWRLVLDTNLTGAFLGIRHA 120
Query: 177 LPGMLKRKKGAIVNIGS 193
           +P +L+R  G IVN+GS
Sbjct: 121 VPALLRRGGGTIVNVGS 137

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 11/173 (6%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           ALVTG + G+GK+ A +LA+ G N+V+   R+     + ++ I+    K  +    V   
Sbjct: 7   ALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQP 66
Query: 115 GDLDEGVERIKEAIEGLDVGVLINNV--GISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
             + E  ++I E    LD  V +NN   G+  P      E+++      + +N +     
Sbjct: 67  AKIKEMFQQIDETFGRLD--VFVNNAASGVLRP----VMELEETHWDWTMNINAKALLFC 120
Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
            Q     M K   G IV+I S  +I    +  Y+    +KA ++  +R L VE
Sbjct: 121 AQEAAKLMEKNGGGHIVSISSLGSIRYLEN--YTTVGVSKAALEALTRYLAVE 171

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 8/180 (4%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A+VTG + GIG +    L + G  +    R+ ++L+    +++ ++   ++ + V D   
Sbjct: 11  AVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLD 70
Query: 116 DLDEGVERIKEAIEGL--DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
            L   V    EA E       +L+NN G     + F    D+   + L ++         
Sbjct: 71  ALQ--VRAFAEACERTLGCASILVNNAGQGR-VSTFAETTDEAWSEEL-QLKFFSVIHPV 126
Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           +A LP +  R   AIV + S   +    +P     +A +A +    RS+  E+   G+ V
Sbjct: 127 RAFLPQLESRADAAIVCVNS--LLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRV 184

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG   GIG+     L  +G  +V V R        SD +        I+ V VD
Sbjct: 7   GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTN------SDLVSLAKECPGIEPVCVD 60
Query: 113 FSGDLDEGVERIKEAIEGL-DVGVLINNVG--ISYPYARFFHEVDQVLLKNLIKVNVEGT 169
             GD D      ++A+ G+  V +L+NN    I  P    F EV +        VN+   
Sbjct: 61  L-GDWDA----TEKALGGIGPVDLLVNNAALVIMQP----FLEVTKEAFDRSFSVNLRSV 111
Query: 170 TKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
            +V+Q V   M+ R   G+IVN+ S  A V  + P    Y++TK  +   ++++ +E   
Sbjct: 112 FQVSQMVARDMINRGVPGSIVNVSSMVAHV--TFPNLITYSSTKGAMTMLTKAMAMELGP 169
Query: 229 SGIDVQ 234
             I V 
Sbjct: 170 HKIRVN 175

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 92/187 (49%), Gaps = 14/187 (7%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G   ++TG + G+GKS A + A     +V+  R+ +   D ++S+  +  K   +++ V 
Sbjct: 7   GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKE---DEANSVLEEIKKVGGEAIAV- 62
Query: 113 FSGDL---DEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
             GD+    + +  ++ AI+    + V+INN G++ P +   HE+       +I  N+ G
Sbjct: 63  -KGDVTVESDVINLVQSAIKEFGKLDVMINNAGLANPVSS--HEMSLSDWNKVIDTNLTG 119
Query: 169 TTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
               ++  +   ++   KG ++N+ S     IP  PL+  YAA+K  +   + +L +EY 
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSS-VHEKIPW-PLFVHYAASKGGMKLMTETLALEYA 177
Query: 228 KSGIDVQ 234
             GI V 
Sbjct: 178 PKGIRVN 184

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 76/186 (40%), Gaps = 4/186 (2%)
Query: 48  NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIK 107
           +L K    A++TG + GIG   A  LA  G  +VL+ R+   L+ V D I       Q  
Sbjct: 2   SLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEP 61
Query: 108 SVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVE 167
            V+     D  +    IK+  +      ++ N    +        VD    + + ++NV 
Sbjct: 62  IVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAXFXDGSLSEPVDN--FRKIXEINVI 119
Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
               + + V      +K G I N+ S AA    +D    +Y +TK  +   + SLY E  
Sbjct: 120 AQYGILKTVTEIXKVQKNGYIFNVASRAAKYGFADG--GIYGSTKFALLGLAESLYRELA 177
Query: 228 KSGIDV 233
             GI V
Sbjct: 178 PLGIRV 183

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 91/187 (48%), Gaps = 14/187 (7%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G   ++TG + G+GKS A + A     +V+  R+ +   D ++S+  +  K   +++ V 
Sbjct: 7   GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKE---DEANSVLEEIKKVGGEAIAV- 62
Query: 113 FSGDL---DEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
             GD+    + +  ++ AI+    + V+INN G+  P +   HE+       +I  N+ G
Sbjct: 63  -KGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSS--HEMSLSDWNKVIDTNLTG 119
Query: 169 TTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
               ++  +   ++   KG ++N+ S     IP  PL+  YAA+K  +   + +L +EY 
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSS-VHEKIPW-PLFVHYAASKGGMKLMTETLALEYA 177
Query: 228 KSGIDVQ 234
             GI V 
Sbjct: 178 PKGIRVN 184

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 91/187 (48%), Gaps = 14/187 (7%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G   ++TG + G+GKS A + A     +V+  R+ +   D ++S+  +  K   +++ V 
Sbjct: 7   GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKE---DEANSVLEEIKKVGGEAIAV- 62
Query: 113 FSGDL---DEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
             GD+    + +  ++ AI+    + V+INN G+  P +   HE+       +I  N+ G
Sbjct: 63  -KGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSS--HEMSLSDWNKVIDTNLTG 119
Query: 169 TTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
               ++  +   ++   KG ++N+ S     IP  PL+  YAA+K  +   + +L +EY 
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSS-VHEKIPW-PLFVHYAASKGGMKLMTETLALEYA 177
Query: 228 KSGIDVQ 234
             GI V 
Sbjct: 178 PKGIRVN 184

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 24/197 (12%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVL----------VGRNPDKLKDVSDSI----- 97
           G  A +TG   G G+S A +LA  G +++           V   P   +D+ ++      
Sbjct: 15  GRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVED 74
Query: 98  QAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVL 157
           Q + A T++  V  D +  L E V    E    LDV  ++ N G+   + R +   D+  
Sbjct: 75  QGRKALTRVLDVRDDAA--LRELVADGMEQFGRLDV--VVANAGV-LSWGRVWELTDE-Q 128
Query: 158 LKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLYSVYAATKAYID 216
              +I VN+ GT +  +A +P M++    G+IV + S A   + + P    Y+A+K  + 
Sbjct: 129 WDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAG--LKATPGNGHYSASKHGLT 186
Query: 217 QFSRSLYVEYRKSGIDV 233
             + +L +E  + GI V
Sbjct: 187 ALTNTLAIELGEYGIRV 203

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 18/171 (10%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A++TG + GIG++ A  LA+ G  L L  R+ D+L+ ++  +       Q + V V F  
Sbjct: 5   AVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELM------QEQGVEV-FYH 57
Query: 116 DLD----EGVERI-KEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
            LD    E VE   K+ +E   DV V++ N G+ Y + R      +     +I+VN+ G 
Sbjct: 58  HLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGY-FKRLEELS-EEEFHEMIEVNLLGV 115
Query: 170 TKVTQAVLPGMLKRKKG-AIVNIGSGAAIVIPSDPLY-SVYAATKAYIDQF 218
            +  +A L   LKR  G A+V     +A +IP    Y S   A +A +  F
Sbjct: 116 WRTLKAFLDS-LKRTGGLALVTTSDVSARLIPYGGGYVSTKWAARALVRTF 165

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 18/171 (10%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A++TG + GIG++ A  LA+ G  L L  R+ D+L+ ++  +       Q + V V F  
Sbjct: 27  AVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELM------QEQGVEV-FYH 79
Query: 116 DLD----EGVERI-KEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
            LD    E VE   K+ +E   DV V++ N G+ Y + R      +     +I+VN+ G 
Sbjct: 80  HLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGY-FKRLEELS-EEEFHEMIEVNLLGV 137
Query: 170 TKVTQAVLPGMLKRKKG-AIVNIGSGAAIVIPSDPLY-SVYAATKAYIDQF 218
            +  +A L   LKR  G A+V     +A +IP    Y S   A +A +  F
Sbjct: 138 WRTLKAFLDS-LKRTGGLALVTTSDVSARLIPYGGGYVSTKWAARALVRTF 187

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 12/193 (6%)
Query: 50  RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSV 109
           R  G  A++TG T GIG + A +  + G  +++ GR+ D  +  + S+       QI+  
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVG---TPDQIQFF 59
Query: 110 VVDFSGDLDEGVERIKEAIEGL--DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVE 167
             D S   ++G  ++ +A E     V  L+NN GI+    +   E      + L+ VN++
Sbjct: 60  QHDSSD--EDGWTKLFDATEKAFGPVSTLVNNAGIA--VNKSVEETTTAEWRKLLAVNLD 115
Query: 168 GTTKVTQAVLPGMLKRKKGA-IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
           G    T+  +  M  +  GA I+N+ S    V   DP    Y A+K  +   S+S  ++ 
Sbjct: 116 GVFFGTRLGIQRMKNKGLGASIINMSSIEGFV--GDPSLGAYNASKGAVRIMSKSAALDC 173
Query: 227 RKSGIDVQCQVLF 239
                DV+   + 
Sbjct: 174 ALKDYDVRVNTVH 186

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 14/106 (13%)
Query: 135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGS- 193
            ++NN G  +P  +   E      + L+++N+ GT  +T+  LP  L++ +G ++NI S 
Sbjct: 85  CVVNNAG-HHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALP-YLRKSQGNVINISSL 142
Query: 194 ----GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
               G A  +P       Y ATK  +   +++L ++    G+ V C
Sbjct: 143 VGAIGQAQAVP-------YVATKGAVTAMTKALALDESPYGVRVNC 181

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  A+VT  + G+G + A +LA+ G  L+L  RN +KL+  +  I +  +  Q+  V  D
Sbjct: 7   GKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGD 66
Query: 113 FS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFH 151
               GD+D   E+ ++ + G D  +L+ + G   P  RF  
Sbjct: 67  IREPGDIDRLFEKARD-LGGAD--ILVYSTGGPRP-GRFME 103

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 81/194 (41%), Gaps = 23/194 (11%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVV 111
           G  ALVTG + GIG++ A +LA  G L  +  G   ++ ++    IQ+            
Sbjct: 7   GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGS------AF 60
Query: 112 DFSGDLD--EGVERIKEAIE--------GLDVGVLINNVGISYPYARFFHEVDQVLLKNL 161
               +L+   GVE +  +++             +LINN GI  P A F  E  +      
Sbjct: 61  SIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIG-PGA-FIEETTEQFFDRX 118
Query: 162 IKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRS 221
           + VN +    + Q  L  +  R    I+NI S A  +  S P +  Y+ TK  I+  + +
Sbjct: 119 VSVNAKAPFFIIQQALSRL--RDNSRIINISSAATRI--SLPDFIAYSXTKGAINTXTFT 174
Query: 222 LYVEYRKSGIDVQC 235
           L  +    GI V  
Sbjct: 175 LAKQLGARGITVNA 188

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 91/179 (50%), Gaps = 12/179 (6%)
Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI-QAKYAKTQIKSVVVDFSG 115
           L+TG   G+GK +A   AK G  +V+     +  KD + ++ + K A  +      D + 
Sbjct: 326 LITGAGAGLGKEYAKWFAKYGAKVVV-----NDFKDATKTVDEIKAAGGEAWPDQHDVAK 380
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
           D +  ++ + +    +D  +L+NN GI     R F ++ +    ++ +V++ GT  +++ 
Sbjct: 381 DSEAIIKNVIDKYGTID--ILVNNAGILRD--RSFAKMSKQEWDSVQQVHLIGTFNLSRL 436
Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQ 234
             P  ++++ G I+NI S + I    +   + Y+++KA I   S+++ +E  K+ I V 
Sbjct: 437 AWPYFVEKQFGRIINITSTSGIY--GNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVN 493

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           AL+TG   GIG++ A  LA  G+ +  +GR   ++++V+D I    A  Q  ++  D S 
Sbjct: 31  ALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVG--AGGQAIALEADVSD 88
Query: 116 DLDEGVERIKEAIEGL-----DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
           +L     + + A+  L      + +++ N GI+  +A    ++        I VN+ GT 
Sbjct: 89  EL-----QXRNAVRDLVLKFGHLDIVVANAGINGVWAP-IDDLKPFEWDETIAVNLRGTF 142
Query: 171 KVTQAVLPGMLKRKKGAIVNIGS 193
                 +P + +R  GAIV + S
Sbjct: 143 LTLHLTVPYLKQRGGGAIVVVSS 165

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 25/156 (16%)
Query: 50  RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR----NPDKLKDV---SDSIQAKYA 102
           R  G    +TG + GIGK+ A + AK G N+V+  +    +P  L  +   ++ I+A   
Sbjct: 42  RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGG 101
Query: 103 KTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVG-------ISYPYARFFHEVDQ 155
           K     V V     +   VE+  +   G+D  +L+NN         +  P  R       
Sbjct: 102 KALPCIVDVRDEQQISAAVEKAIKKFGGID--ILVNNASAISLTNTLDTPTKR------- 152
Query: 156 VLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNI 191
             L  ++ VN  GT   ++A +P + K K   I+NI
Sbjct: 153 --LDLMMNVNTRGTYLASKACIPYLKKSKVAHILNI 186

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 17/169 (10%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G   LVTG    IG + A +LA+ G  + L+  N + L+    S++ K    + +S V D
Sbjct: 7   GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCD 64
Query: 113 FS------GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNV 166
            +      G +D  V    +      +  L NN G    +A    +        ++ +NV
Sbjct: 65  VTSEEAVIGTVDSVVRDFGK------IDFLFNNAGYQGAFAPV-QDYPSDDFARVLTINV 117
Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYI 215
            G   V +AV   M+ +  G IVN  S A +  P  P  + Y  +K  I
Sbjct: 118 TGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP--PNMAAYGTSKGAI 164

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 8/181 (4%)
Query: 57  LVTGPTDGIGKSFAFQLAKTGLNL-VLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           LVTG + GIG++ A QLA  G N+ V   R+    ++  ++I A     ++ S  V    
Sbjct: 30  LVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANRE 89
Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ- 174
              E +E  + A  G   GV ++N GI+   A  F  +       +I  N++    V Q 
Sbjct: 90  QCREVLEH-EIAQHGAWYGV-VSNAGIARDAA--FPALSNDDWDAVIHTNLDSFYNVIQP 145
Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQ 234
            ++P +  R+ G I+ + S + ++     +   Y+A KA I   +++L +E  K  I V 
Sbjct: 146 CIMPMIGARQGGRIITLSSVSGVMGNRGQVN--YSAAKAGIIGATKALAIELAKRKITVN 203
Query: 235 C 235
           C
Sbjct: 204 C 204

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 22/190 (11%)
Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  AL+TG   G G+  A + AK G  +V+V R         D   A+    +I    + 
Sbjct: 9   GKVALITGAGSGFGEGMAKRFAKGGAKVVIVDR---------DKAGAERVAGEIGDAALA 59
Query: 113 FSGDLDEGVERIKEAIEGLD----VGVLINNVGISY-PYARFFHEVDQVLLKNLIKVNVE 167
            + D+ +  +        L     V +L+NN GI + P      E ++     ++ VNV 
Sbjct: 60  VAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEE--FDRIVGVNVR 117
Query: 168 GTTKVTQAVLPGM----LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
           G   +T  ++P       K ++  I+N+ S  A      P  + Y ATK ++   +++L 
Sbjct: 118 GVYLMTSKLIPHFKENGAKGQECVILNVASTGAGR--PRPNLAWYNATKGWVVSVTKALA 175
Query: 224 VEYRKSGIDV 233
           +E   + I V
Sbjct: 176 IELAPAKIRV 185

>pdb|1A27|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C-Terminal Deletion Mutant Complexed With Estradiol And Nadp+ Length = 289

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 26/180 (14%)
Query: 57  LVTGPTDGIGKSFAFQLAK----------TGLNLVLVGRNPDKLKDVSDSIQAKYAKTQI 106
           L+TG + GIG   A +LA           T  +L   GR    L + + ++       + 
Sbjct: 6   LITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGR----LWEAARALACPPGSLET 61
Query: 107 KSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEVDQVLLKNLIKV 164
             + V  S  +    ER+ E      V VL+ N G+    P       + +  + +++ V
Sbjct: 62  LQLDVRDSKSVAAARERVTEG----RVDVLVCNAGLGLLGP----LEALGEDAVASVLDV 113
Query: 165 NVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYV 224
           NV GT ++ QA LP M +R  G ++  GS   ++    P   VY A+K  ++    SL V
Sbjct: 114 NVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM--GLPFNDVYCASKFALEGLCESLAV 171

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 57  LVTGPTDGIGKSFAFQLAKTGLN-------LVLVGRNPDKLKDVSDSIQAKYAKTQIKSV 109
           L+TG   GIG++ A + A+   +       LVL  R    L+ +S   +A+ A T   + 
Sbjct: 6   LITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITA 65
Query: 110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARF--FHEVDQVLLKNLIKVNVE 167
            +    D+      I E    +D   L+NN G+     RF    ++ +      +  N++
Sbjct: 66  DISDMADVRRLTTHIVERYGHID--CLVNNAGV----GRFGALSDLTEEDFDYTMNTNLK 119
Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAA 196
           GT  +TQA+   M ++  G I  I S AA
Sbjct: 120 GTFFLTQALFALMERQHSGHIFFITSVAA 148

>pdb|1IOL|A Chain A, Estrogenic 17-beta Hydroxysteroid Dehydrogenase Complexed 17-beta- Estradiol Length = 327

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 57  LVTGPTDGIGKSFAFQLAK----------TGLNLVLVGRNPDKLKDVSDSIQAKYAKTQI 106
           L+TG + GIG   A +LA           T  +L   GR    L + + ++       + 
Sbjct: 6   LITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGR----LWEAARALACPPGSLET 61
Query: 107 KSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEVDQVLLKNLIKV 164
             + V  S  +    ER+ E      V VL+ N G+    P       + +  + ++++V
Sbjct: 62  LQLDVRDSKSVAAARERVTEG----RVDVLVCNAGLGLLGP----LEALGEDAVASVLEV 113
Query: 165 NVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYV 224
           NV GT ++ QA LP M +R  G ++  GS   ++    P   VY A+K  ++    SL V
Sbjct: 114 NVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM--GLPFNDVYCASKFALEGLCESLAV 171

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 80/183 (43%), Gaps = 45/183 (24%)
Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK-------DVSDSIQAKYAKTQIKSV 109
           LVTG   GIG + A   A  G  + +  R+ +  +       D++D+ Q + A  +I   
Sbjct: 25  LVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFLAVKCDITDTEQVEQAYKEI--- 81
Query: 110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLI 162
                       E     +E     VLI N G++          DQ+L++       +++
Sbjct: 82  ------------EETHGPVE-----VLIANAGVTK---------DQLLMRMSEEDFTSVV 115
Query: 163 KVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSL 222
           + N+ GT +V +     ML+ KKG +V I S   + +      + YAA+KA +  F+RSL
Sbjct: 116 ETNLTGTFRVVKRANRAMLRAKKGRVVLISS--VVGLLGSAGQANYAASKAGLVGFARSL 173
Query: 223 YVE 225
             E
Sbjct: 174 ARE 176

>pdb|1FDU|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221l Complexed With Estradiol And Nadp+ Length = 327

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 26/180 (14%)
Query: 57  LVTGPTDGIGKSFAFQLAK----------TGLNLVLVGRNPDKLKDVSDSIQAKYAKTQI 106
           L+TG + GIG   A +LA           T  +L   GR    L + + ++       + 
Sbjct: 6   LITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGR----LWEAARALACPPGSLET 61
Query: 107 KSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEVDQVLLKNLIKV 164
             + V  S  +    ER+ E      V VL+ N G+    P       + +  + +++ V
Sbjct: 62  LQLDVRDSKSVAAARERVTEG----RVDVLVCNAGLGLLGP----LEALGEDAVASVLDV 113
Query: 165 NVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYV 224
           NV GT ++ QA LP M +R  G ++  GS   ++    P   VY A+K  ++    SL V
Sbjct: 114 NVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM--GLPFNDVYCASKFALEGLCESLAV 171

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 46  AKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVL---------VGRNPDKLKDVSDS 96
           A  LR  G   LVTG   G+G+++A   A+ G  +V+         VG+       V + 
Sbjct: 2   ASPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEE 61
Query: 97  IQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD-VGVLINNVGISYPYARFFHEVDQ 155
           I+ +  K      V ++   ++ G + +K A++    + V++NN GI     R F  +  
Sbjct: 62  IRRRGGK-----AVANYD-SVEAGEKLVKTALDTFGRIDVVVNNAGILRD--RSFSRISD 113
Query: 156 VLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYI 215
                + +V++ G+ +VT+A      K+  G I+   S + I    +   + Y+A K  +
Sbjct: 114 EDWDIIQRVHLRGSFQVTRAAWDHXKKQNYGRIIXTASASGIY--GNFGQANYSAAKLGL 171
Query: 216 DQFSRSLYVEYRKSGIDVQCQVL 238
              + +L +E RK+  ++ C  +
Sbjct: 172 LGLANTLVIEGRKN--NIHCNTI 192

>pdb|1FDW|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221q Complexed With Estradiol Length = 327

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 26/180 (14%)
Query: 57  LVTGPTDGIGKSFAFQLAK----------TGLNLVLVGRNPDKLKDVSDSIQAKYAKTQI 106
           L+TG + GIG   A +LA           T  +L   GR    L + + ++       + 
Sbjct: 6   LITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGR----LWEAARALACPPGSLET 61
Query: 107 KSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEVDQVLLKNLIKV 164
             + V  S  +    ER+ E      V VL+ N G+    P       + +  + +++ V
Sbjct: 62  LQLDVRDSKSVAAARERVTEG----RVDVLVCNAGLGLLGP----LEALGEDAVASVLDV 113
Query: 165 NVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYV 224
           NV GT ++ QA LP M +R  G ++  GS   ++    P   VY A+K  ++    SL V
Sbjct: 114 NVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM--GLPFNDVYCASKFALEGLCESLAV 171

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 136 LINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGML---KRKKGAIVNIG 192
           L+NN GI+      F ++       ++ VN+ GT   TQAVL   L    R   +I+NI 
Sbjct: 111 LVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAXLASDARASRSIINIT 170
Query: 193 SGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           S +A+    + L   Y  +KA +  FS+ L +   ++GI V
Sbjct: 171 SVSAVXTSPERLD--YCXSKAGLAAFSQGLALRLAETGIAV 209

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	255
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	4e-43
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	7e-39
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	8e-39
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	2e-38
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	4e-38
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	3e-37
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	5e-37
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	1e-36
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	5e-36
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	6e-36
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	6e-36
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	8e-36
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	1e-35
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	2e-35
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	4e-35
1xkq_A	280	Short-chain reductase family member (5D234); parra	7e-35
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	7e-35
1xhl_A	297	Short-chain dehydrogenase/reductase family member	2e-34
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	2e-34
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	4e-34
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	4e-34
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	4e-34
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	8e-34
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	1e-33
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	1e-33
1spx_A	278	Short-chain reductase family member (5L265); paral	2e-33
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	5e-33
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	6e-33
1xq1_A	266	Putative tropinone reducatse; structural genomics,	8e-33
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	1e-32
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	1e-32
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	5e-32
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	5e-32
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	6e-32
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-32
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	8e-32
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	1e-31
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	1e-31
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	1e-31
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	3e-31
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	5e-31
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	5e-31
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	7e-31
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	8e-31
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	8e-31
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	1e-30
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	2e-30
3cxt_A	291	Dehydrogenase with different specificities; rossma	2e-30
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	3e-30
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	4e-30
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	4e-30
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	5e-30
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	7e-30
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	7e-30
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	1e-29
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	2e-29
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	2e-29
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	2e-29
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	3e-29
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	3e-29
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	3e-29
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	3e-29
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	3e-29
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	4e-29
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	4e-29
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	5e-29
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	8e-29
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	9e-29
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	1e-28
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	1e-28
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	1e-28
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	1e-28
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	1e-28
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	2e-28
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	2e-28
4dqx_A	277	Probable oxidoreductase protein; structural genomi	3e-28
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	3e-28
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	4e-28
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-28
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	1e-27
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	1e-27
3imf_A	257	Short chain dehydrogenase; structural genomics, in	1e-27
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	2e-27
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	2e-27
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	3e-27
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	3e-27
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	5e-27
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	5e-27
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	6e-27
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	6e-27
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	7e-27
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	1e-26
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	1e-26
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	3e-26
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	4e-26
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	4e-26
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	6e-26
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	7e-26
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	7e-26
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	8e-26
3rih_A	293	Short chain dehydrogenase or reductase; structural	9e-26
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	1e-25
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	1e-25
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	1e-25
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	2e-25
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	2e-25
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	2e-25
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	2e-25
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-25
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	3e-25
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	3e-25
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	3e-25
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	3e-25
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	4e-25
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	5e-25
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	5e-25
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	5e-25
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	7e-25
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	8e-25
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	1e-24
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	1e-24
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	1e-24
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	1e-24
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	1e-24
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-24
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	2e-24
4e4y_A	244	Short chain dehydrogenase family protein; structur	2e-24
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	2e-24
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	3e-24
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	3e-24
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	4e-24
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	4e-24
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	5e-24
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	6e-24
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	6e-24
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	7e-24
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	9e-24
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	9e-24
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	1e-23
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-23
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	1e-23
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	2e-23
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	3e-23
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	4e-23
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	4e-23
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	6e-23
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-23
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	7e-23
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	9e-23
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	1e-22
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	1e-22
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	1e-22
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	1e-22
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	1e-22
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	2e-22
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	2e-22
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	3e-22
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	4e-22
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	2e-21
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	2e-21
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	2e-21
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	5e-21
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	6e-21
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	1e-20
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	3e-20
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	3e-20
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	4e-20
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	5e-20
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	9e-20
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	1e-19
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	1e-19
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	2e-19
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	5e-19
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	2e-18
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	9e-18
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	1e-17
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-17
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	3e-17
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	4e-17
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	4e-16
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	7e-16
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	2e-15
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	9e-15
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	9e-14
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	1e-10
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	2e-10
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	6e-10
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	1e-08
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	8e-04
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	8e-04

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  145 bits (368), Expect = 4e-43
 Identities = 33/182 (18%), Positives = 67/182 (36%), Gaps = 17/182 (9%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            ++TG + G+G   A      G    L GR+  KL  V++ +              D + 
Sbjct: 4   IVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNV-----GYRARDLAS 58

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
             ++++  E++           ++++ G    Y     E D   ++ LI+ N+     V 
Sbjct: 59  HQEVEQLFEQLDSIPS-----TVVHSAGSG--YFGLLQEQDPEQIQTLIENNLSSAINVL 111

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           + ++     +    +V I S AA         S Y A K  +     S+ +E +   + +
Sbjct: 112 RELVKRYKDQ-PVNVVMIMSTAAQQ--PKAQESTYCAVKWAVKGLIESVRLELKGKPMKI 168

Query: 234 QC 235
             
Sbjct: 169 IA 170

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  133 bits (337), Expect = 7e-39
 Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 21/180 (11%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            L+TG T G+G +FA  L   G +L+L GR    L +++  + A+        +  D + 
Sbjct: 3   VLITGATGGLGGAFARALK--GHDLLLSGRRAGALAELAREVGARA-------LPADLA- 52

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
           D +   + + E    LD+  L++ VG +        E  + L++ ++  ++         
Sbjct: 53  D-ELEAKALLEEAGPLDL--LVHAVGKAGR--ASVREAGRDLVEEMLAAHLLTA----AF 103

Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
           VL     +K    V  G+    V    P ++ YAA K  ++ +  +   E  + G+ +  
Sbjct: 104 VLKHARFQKGARAVFFGAYPRYV--QVPGFAAYAAAKGALEAYLEAARKELLREGVHLVL 161

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  134 bits (340), Expect = 8e-39
 Identities = 40/188 (21%), Positives = 75/188 (39%), Gaps = 14/188 (7%)

Query: 56  ALVTGPTDGIGKSFAFQLAKT---GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
            ++TG + G G++ A QLA+    G  +++  R+   L+ + + + A+    ++     D
Sbjct: 9   CVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAAD 68

Query: 113 FS--GDLDEGVERIKEA--IEGLDVGVLINNVGISYPYAR-FFHEVDQVLLKNLIKVNVE 167
                 +   +  ++E    EGL   +LINN       ++ F +  D   + N   +N+ 
Sbjct: 69  LGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLT 128

Query: 168 GTTKVTQAVLPGMLKRK--KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
               +T   L            +VNI S  A+       + +Y A KA  D   + L  E
Sbjct: 129 SMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ--PYKGWGLYCAGKAARDMLYQVLAAE 186

Query: 226 YRKSGIDV 233
                + V
Sbjct: 187 EP--SVRV 192

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  133 bits (337), Expect = 2e-38
 Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 14/183 (7%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAK-TQIKSVVVDFS 114
           A++TG + GIG   A  LA  G  +VL+ R+   L+ V D I        +   + +D +
Sbjct: 10  AIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDIT 69

Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEVDQVLLKNLIKVNVEGTT 170
                D  ++ I +    +D+  L+N   +      +       ++     +++NV    
Sbjct: 70  DCTKADTEIKDIHQKYGAVDI--LVNAAAMFMDGSLSEPVDNFRKI-----MEINVIAQY 122

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
            + + V   M  +K G I N+ S AA          +Y +TK  +   + SLY E    G
Sbjct: 123 GILKTVTEIMKVQKNGYIFNVASRAAKYG--FADGGIYGSTKFALLGLAESLYRELAPLG 180

Query: 231 IDV 233
           I V
Sbjct: 181 IRV 183

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  133 bits (338), Expect = 4e-38
 Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 10/181 (5%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            +VTG + GIG+  A+ LAK G ++V+  R+ + L+ V        A      +      
Sbjct: 31  VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAA-SAHYIAGTMED 89

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
               ++ V +  + + GLD  +LI N   +          D   ++  ++VN      +T
Sbjct: 90  MTFAEQFVAQAGKLMGGLD--MLILNHITNTS--LNLFHDDIHHVRKSMEVNFLSYVVLT 145

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
            A LP MLK+  G+IV + S A  V  + P+ + Y+A+K  +D F  S+  EY  S ++V
Sbjct: 146 VAALP-MLKQSNGSIVVVSSLAGKV--AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNV 202

Query: 234 Q 234
            
Sbjct: 203 S 203

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  131 bits (332), Expect = 3e-37
 Identities = 48/186 (25%), Positives = 88/186 (47%), Gaps = 10/186 (5%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGL---NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSV 109
               L+TG + GIGK+ A +  +       L+L  R  +KL+++  +I  ++   ++   
Sbjct: 33  KKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVA 92

Query: 110 VVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVE 167
            +D +    +   +E + +  + +D+  L+NN G +    R   ++    ++++   NV 
Sbjct: 93  QLDITQAEKIKPFIENLPQEFKDIDI--LVNNAGKALGSDRV-GQIATEDIQDVFDTNVT 149

Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
               +TQAVLP    +  G IVN+GS A       P  S+Y A+K  +  F+ SL  E  
Sbjct: 150 ALINITQAVLPIFQAKNSGDIVNLGSIAGRDAY--PTGSIYCASKFAVGAFTDSLRKELI 207

Query: 228 KSGIDV 233
            + I V
Sbjct: 208 NTKIRV 213

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  129 bits (327), Expect = 5e-37
 Identities = 35/180 (19%), Positives = 72/180 (40%), Gaps = 14/180 (7%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            +VTG   G+G++    L + G  + ++GR   +L+     +        +  +V D + 
Sbjct: 6   IIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGN-----AVIGIVADLAH 60

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
             D+D       E     +  ++++  G                ++ +++ N+  T  V 
Sbjct: 61  HEDVDVAFAAAVEWGGLPE--LVLHCAGTG--EFGPVGVYTAEQIRRVMESNLVSTILVA 116

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           Q  +  +   + G + N+ S AA V       S+Y A+K  +  F  SL  E + S + +
Sbjct: 117 QQTVRLI-GERGGVLANVLSSAAQV--GKANESLYCASKWGMRGFLESLRAELKDSPLRL 173

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  129 bits (327), Expect = 1e-36
 Identities = 44/182 (24%), Positives = 77/182 (42%), Gaps = 8/182 (4%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           ALVTG + GIG + A  L + GL +V   R    +++++   ++      +     D S 
Sbjct: 35  ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN 94

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
             D+      I+    G+D  + INN G++ P             K++  VNV   +  T
Sbjct: 95  EEDILSMFSAIRSQHSGVD--ICINNAGLARP--DTLLSGSTSGWKDMFNVNVLALSICT 150

Query: 174 QAVLPGMLKRK--KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           +     M +R    G I+NI S +   +    +   Y+ATK  +   +  L  E R++  
Sbjct: 151 REAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQT 210

Query: 232 DV 233
            +
Sbjct: 211 HI 212

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  128 bits (323), Expect = 5e-36
 Identities = 54/178 (30%), Positives = 91/178 (51%), Gaps = 8/178 (4%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVTG T GIGK+ A  L   G N+++ GR  + + +    I+A+Y    ++ VV D   
Sbjct: 13  ALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGT 72

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
             ++G + + E    +D  +LINN+GI       + ++       L +VN+    ++T++
Sbjct: 73  --EQGCQDVIEKYPKVD--ILINNLGI--FEPVEYFDIPDEDWFKLFEVNIMSGVRLTRS 126

Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
            L  M++RK+G ++ I S AAI+       + Y+ATK      SRSL      + + V
Sbjct: 127 YLKKMIERKEGRVIFIASEAAIMPS--QEMAHYSATKTMQLSLSRSLAELTTGTNVTV 182

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  127 bits (322), Expect = 6e-36
 Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 13/194 (6%)

Query: 43  LRPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYA 102
           L P  +     S   +TG T G G++ A + A+ G +LVL GR  ++L+ ++  +    A
Sbjct: 13  LVPRGSHM--SSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELS---A 67

Query: 103 KTQIKSVVVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKN 160
           KT++  + +D      +   V+ + E    L    LINN G++          D      
Sbjct: 68  KTRVLPLTLDVRDRAAMSAAVDNLPEEFATLR--GLINNAGLALGTDP-AQSCDLDDWDT 124

Query: 161 LIKVNVEGTTKVTQAVLPGMLKRKKGA-IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFS 219
           ++  N++G    T+ +LP ++    GA IVN+GS A       P   VY  TKA+++QFS
Sbjct: 125 MVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPY--PGSHVYGGTKAFVEQFS 182

Query: 220 RSLYVEYRKSGIDV 233
            +L  + + +G+ V
Sbjct: 183 LNLRCDLQGTGVRV 196

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  127 bits (320), Expect = 6e-36
 Identities = 40/181 (22%), Positives = 70/181 (38%), Gaps = 13/181 (7%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
             V G  D IG   A + A  G  +    RN +KL  +   I+A  A  +I +  +D   
Sbjct: 10  VAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEA--AGGRIVARSLDAR- 66

Query: 116 DLDEGVERIKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
           + DE V     A +    L+  V I NVG +        E    + + + ++        
Sbjct: 67  NEDE-VTAFLNAADAHAPLE--VTIFNVGANVN--FPILETTDRVFRKVWEMACWAGFVS 121

Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
            +     ML   +G I   G+ A++       ++ +A+ K  +   ++S+  E     I 
Sbjct: 122 GRESARLMLAHGQGKIFFTGATASLRG--GSGFAAFASAKFGLRAVAQSMARELMPKNIH 179

Query: 233 V 233
           V
Sbjct: 180 V 180

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  127 bits (321), Expect = 8e-36
 Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 10/182 (5%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSV-VV 111
               L+TG + GIG+  A +L   G  ++L  R   +++ ++  I+        + + V 
Sbjct: 4   DKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVT 63

Query: 112 DFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
           D    +    +   +    +D  VL+NN G+          V     + +I VN++G   
Sbjct: 64  DRH-SVAAFAQAAVDTWGRID--VLVNNAGVM--PLSPLAAVKVDEWERMIDVNIKGVLW 118

Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
              AVLP M  ++ G I+NIGS  A+ +   P  +VY ATK  +   S  L  E   + I
Sbjct: 119 GIGAVLPIMEAQRSGQIINIGSIGALSVV--PTAAVYCATKFAVRAISDGLRQE--STNI 174

Query: 232 DV 233
            V
Sbjct: 175 RV 176

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  126 bits (318), Expect = 1e-35
 Identities = 41/180 (22%), Positives = 83/180 (46%), Gaps = 12/180 (6%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           A++TG + GIG++ A  LA+ G  L L  R+ D+L+ ++  +  +    ++    +D S 
Sbjct: 5   AVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG-VEVFYHHLDVSK 63

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              ++E  +++ E    +DV  ++ N G+ Y   +   E+ +     +I+VN+ G  +  
Sbjct: 64  AESVEEFSKKVLERFGDVDV--VVANAGLGYF--KRLEELSEEEFHEMIEVNLLGVWRTL 119

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           +A L  + +    A+V     +A +IP       Y +TK       R+  +E     +  
Sbjct: 120 KAFLDSLKRTGGLALVTTSDVSARLIPY---GGGYVSTKWAARALVRTFQIE--NPDVRF 174

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  125 bits (317), Expect = 2e-35
 Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 12/180 (6%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            LVTG T G G+    +  + G  ++  GR  ++L+++ D +        +    +D   
Sbjct: 3   VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDN-----LYIAQLDVRN 57

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              ++E +  +      +D+  L+NN G++       H+      + +I  N +G   +T
Sbjct: 58  RAAIEEMLASLPAEWCNIDI--LVNNAGLALGMEPA-HKASVEDWETMIDTNNKGLVYMT 114

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           +AVLPGM++R  G I+NIGS A          +VY ATKA++ QFS +L  +   + + V
Sbjct: 115 RAVLPGMVERNHGHIINIGSTAGSWPY--AGGNVYGATKAFVRQFSLNLRTDLHGTAVRV 172

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  124 bits (314), Expect = 4e-35
 Identities = 42/180 (23%), Positives = 81/180 (45%), Gaps = 14/180 (7%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            L+TG + GIG++ A  L   G  + L+ R+  +L+ ++  ++          +  D   
Sbjct: 8   VLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALP------LPGDVRE 61

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
            GD    V  ++EA   L    L+NN G+     +  HE+     + ++  N+ G     
Sbjct: 62  EGDWARAVAAMEEAFGELSA--LVNNAGVGV--MKPVHELTLEEWRLVLDTNLTGAFLGI 117

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           +  +P +L+R  G IVN+GS A          + Y A+K  +   + +  ++ R++ + V
Sbjct: 118 RHAVPALLRRGGGTIVNVGSLAGKNPF--KGGAAYNASKFGLLGLAGAAMLDLREANVRV 175

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  125 bits (316), Expect = 7e-35
 Identities = 51/183 (27%), Positives = 92/183 (50%), Gaps = 9/183 (4%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAK-YAKTQIKSVVVDFS 114
            ++TG ++GIG++ A   A+ G N+ + GR+ ++L++    I     ++ Q+ SVV D +
Sbjct: 9   VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT 68

Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEVDQVLLKNLIKVNVEGTT 170
                D+ +    +    +D  VL+NN G +    +     +    +    +K+N++   
Sbjct: 69  TEDGQDQIINSTLKQFGKID--VLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVI 126

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
           ++T+ V P  L   KG IVN+ S  A      P +  YA  KA +DQ++RS  ++  K G
Sbjct: 127 EMTKKVKP-HLVASKGEIVNVSSIVAGPQA-QPDFLYYAIAKAALDQYTRSTAIDLAKFG 184

Query: 231 IDV 233
           I V
Sbjct: 185 IRV 187

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  124 bits (315), Expect = 7e-35
 Identities = 45/184 (24%), Positives = 84/184 (45%), Gaps = 17/184 (9%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           ALVTG + GIG +   +LA  G  +    RN  +L +  +  + K     ++  V D   
Sbjct: 24  ALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLS 81

Query: 115 -GDLDEGVERIKEAIEG-LDVGVLINNVGISY--PYARFFHEV-DQVLLKNLIKVNVEGT 169
             + D+ ++ +    +G L+  +L+NN G+        F  +  + +     +  N E  
Sbjct: 82  RTERDKLMQTVAHVFDGKLN--ILVNNAGVVIHKEAKDFTEKDYNII-----MGTNFEAA 134

Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
             ++Q   P +   + G ++ + S A     + P  S+Y+A+K  I+Q ++SL  E+ K 
Sbjct: 135 YHLSQIAYPLLKASQNGNVIFLSSIAGFS--ALPSVSLYSASKGAINQMTKSLACEWAKD 192

Query: 230 GIDV 233
            I V
Sbjct: 193 NIRV 196

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  124 bits (313), Expect = 2e-34
 Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 7/181 (3%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAK-TQIKSVVVDFS 114
            ++TG ++GIG+S A   AK G  + + GRN D+L++    I        +I +VV D +
Sbjct: 29  VIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVT 88

Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
                D+ +         +D  +L+NN G +        +    L +   K+N +   ++
Sbjct: 89  EASGQDDIINTTLAKFGKID--ILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEM 146

Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
           TQ     ++K  KG IVN+ S  A        Y  YA  KA +DQ++R   ++  + G+ 
Sbjct: 147 TQKTKEHLIKT-KGEIVNVSSIVAGPQA-HSGYPYYACAKAALDQYTRCTAIDLIQHGVR 204

Query: 233 V 233
           V
Sbjct: 205 V 205

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  123 bits (311), Expect = 2e-34
 Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 17/184 (9%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           ALVTG + GIG     +LA  G ++    RN  +L D     ++K    ++++ V D S 
Sbjct: 12  ALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSS 69

Query: 115 -GDLDEGVERIKEAIEG-LDVGVLINNVGISY--PYARFFHEV-DQVLLKNLIKVNVEGT 169
             +  E +  +     G L+  +L+NN GI        +  E    +     + +N E  
Sbjct: 70  RSERQELMNTVANHFHGKLN--ILVNNAGIVIYKEAKDYTVEDYSLI-----MSINFEAA 122

Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
             ++    P +   ++G +V I S +  +  + P  +VY ATK  +DQ +R L  E+ K 
Sbjct: 123 YHLSVLAHPFLKASERGNVVFISSVSGAL--AVPYEAVYGATKGAMDQLTRCLAFEWAKD 180

Query: 230 GIDV 233
            I V
Sbjct: 181 NIRV 184

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  122 bits (309), Expect = 4e-34
 Identities = 42/186 (22%), Positives = 74/186 (39%), Gaps = 21/186 (11%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            +      GIG   + +L K  L   ++    +    +++ ++A   K  I     D + 
Sbjct: 8   VIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAE-LKAINPKVNITFHTYDVTV 66

Query: 116 DLDEGVERIKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
            + E  + +K+  +    +D  +LIN  GI        H++++      I +N  G    
Sbjct: 67  PVAESKKLLKKIFDQLKTVD--ILINGAGILDD-----HQIERT-----IAINFTGLVNT 114

Query: 173 TQAVLPGMLKRKKG---AIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
           T A+L    KRK G    I NI S       +     VY+A+KA +  F+ SL      +
Sbjct: 115 TTAILDFWDKRKGGPGGIIANICSVTGFN--AIHQVPVYSASKAAVVSFTNSLAKLAPIT 172

Query: 230 GIDVQC 235
           G+    
Sbjct: 173 GVTAYS 178

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  122 bits (309), Expect = 4e-34
 Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 9/180 (5%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           A++TG + GIG + A   AK G ++VLV R  D+L + + S++ K+   ++  V VD + 
Sbjct: 10  AVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF-GVRVLEVAVDVAT 68

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              +D  VE ++ +  G D+  L+NN G          E      +   ++ V    ++ 
Sbjct: 69  PEGVDAVVESVRSSFGGADI--LVNNAGT--GSNETIMEAADEKWQFYWELLVMAAVRLA 124

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           + ++PGM  R  GAI++  S  A+         +Y  TKA +  FS++L  E  K  I V
Sbjct: 125 RGLVPGMRARGGGAIIHNASICAVQPL--WYEPIYNVTKAALMMFSKTLATEVIKDNIRV 182

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  123 bits (310), Expect = 4e-34
 Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 8/181 (4%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAK-TQIKSVVVDFS 114
            LVTG   GIGK  A  L   G ++++VGRNPDKL      ++A  A    I+    D +
Sbjct: 14  YLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDIT 73

Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
              +    V+ +      L    +++  G S        +VD    +  + +NV GT  V
Sbjct: 74  NEDETARAVDAVTAWHGRLH--GVVHCAGGSENIGP-ITQVDSEAWRRTVDLNVNGTMYV 130

Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
            +     M++   G+ V I S AA    +   +  Y  TK+ +D   +    E   S + 
Sbjct: 131 LKHAAREMVRGGGGSFVGISSIAASN--THRWFGAYGVTKSAVDHLMQLAADELGASWVR 188

Query: 233 V 233
           V
Sbjct: 189 V 189

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  121 bits (307), Expect = 8e-34
 Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 7/182 (3%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  A+VT  + G+G + A +LA+ G  L+L  RN +KL+  +  I +  +  Q+  V  D
Sbjct: 7   GKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGD 66

Query: 113 FSGDLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
                   ++R+ E    L    +L+ + G   P    F E+         ++       
Sbjct: 67  IRE--PGDIDRLFEKARDLGGADILVYSTGG--PRPGRFMELGVEDWDESYRLLARSAVW 122

Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           V +     M+++  G +V IGS    + P   L ++    +  +    R+L +E    G+
Sbjct: 123 VGRRAAEQMVEKGWGRMVYIGSVTL-LRPWQDL-ALSNIMRLPVIGVVRTLALELAPHGV 180

Query: 232 DV 233
            V
Sbjct: 181 TV 182

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  121 bits (305), Expect = 1e-33
 Identities = 57/183 (31%), Positives = 90/183 (49%), Gaps = 11/183 (6%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  AL+TG + GIG++ A  LA  G  + +  R  +KL+ + D + A  A  ++  + +D
Sbjct: 7   GKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTA--AGAKVHVLELD 64

Query: 113 FS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
            +    +D  V    EA+ GLD  +L+NN GI         + D      +I  N+ G  
Sbjct: 65  VADRQGVDAAVASTVEALGGLD--ILVNNAGIM--LLGPVEDADTTDWTRMIDTNLLGLM 120

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
            +T+A LP +  R KG +V + S A  V       +VY ATK  ++ FS +L  E  + G
Sbjct: 121 YMTRAALPHL-LRSKGTVVQMSSIAGRVNV--RNAAVYQATKFGVNAFSETLRQEVTERG 177

Query: 231 IDV 233
           + V
Sbjct: 178 VRV 180

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  121 bits (306), Expect = 1e-33
 Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 16/180 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            ++TG + GIG++ A + ++ G  L+L+ R  ++LK +                 VD + 
Sbjct: 19  VVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL--------NLPNTLCAQVDVTD 70

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
               D  + R ++     D   ++NN G+           +    + +  VNV G     
Sbjct: 71  KYTFDTAITRAEKIYGPADA--IVNNAGMMLL--GQIDTQEANEWQRMFDVNVLGLLNGM 126

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           QAVL  M  R  G I+NI S A       P ++ Y  TK  +   S ++  E   S + V
Sbjct: 127 QAVLAPMKARNCGTIINISSIAGKKTF--PDHAAYCGTKFAVHAISENVREEVAASNVRV 184

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  121 bits (305), Expect = 2e-33
 Identities = 50/183 (27%), Positives = 91/183 (49%), Gaps = 9/183 (4%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAK-YAKTQIKSVVVDFS 114
           A++TG ++GIG++ A   A+ G  + + GR+ ++L++    I A   ++  + SVV D +
Sbjct: 9   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 68

Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARF--FHEVDQVLLKNLIKVNVEGTT 170
                DE +         LD  +L+NN G + P ++               + +N+    
Sbjct: 69  TDAGQDEILSTTLGKFGKLD--ILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVI 126

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
            +T+  +P  L   KG IVNI S A+ +  + P +  Y+  KA IDQ++R+  ++  + G
Sbjct: 127 ALTKKAVP-HLSSTKGEIVNISSIASGLH-ATPDFPYYSIAKAAIDQYTRNTAIDLIQHG 184

Query: 231 IDV 233
           I V
Sbjct: 185 IRV 187

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  119 bits (302), Expect = 5e-33
 Identities = 44/180 (24%), Positives = 80/180 (44%), Gaps = 10/180 (5%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            +++G    +G + A + A+ G +LVL  R  ++L+DV+  +     +    SV  D + 
Sbjct: 14  VVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRAL--SVGTDITD 71

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              +   V+   +A   +D  V+INN          F       +++ I++ V G  ++ 
Sbjct: 72  DAQVAHLVDETMKAYGRVD--VVINNAFRVPSMKP-FANTTFEHMRDAIELTVFGALRLI 128

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           Q   P + +  KGA+VN+ S       S   Y  Y   K+ +   S++L  E  + GI V
Sbjct: 129 QGFTPAL-EESKGAVVNVNSMVVRH--SQAKYGAYKMAKSALLAMSQTLATELGEKGIRV 185

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  119 bits (301), Expect = 6e-33
 Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 7/180 (3%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           A+VTG    IG +    LA+ G  +++   +        + ++ +       SVV+D + 
Sbjct: 16  AIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDV--SSVVMDVTN 73

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              +   V  + E    +D+  L+   GI     +   ++        + +N+ G  +  
Sbjct: 74  TESVQNAVRSVHEQEGRVDI--LVACAGICISEVKA-EDMTDGQWLKQVDINLNGMFRSC 130

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           QAV   ML++K+G IV IGS + +++      + Y A+KA + Q+ RSL  E+   GI  
Sbjct: 131 QAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRA 190

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  119 bits (301), Expect = 8e-33
 Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 15/188 (7%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
               LVTG T GIG +   + A  G  +    RN  +L +     Q K    Q+   V D
Sbjct: 14  AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF--QVTGSVCD 71

Query: 113 FS--GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHE-VDQVLLKNLIKVNVE 167
            S   + ++ ++ +     G  + +LINN+G     P   +  E          I  N+E
Sbjct: 72  ASLRPEREKLMQTVSSMF-GGKLDILINNLGAIRSKPTLDYTAEDFSFH-----ISTNLE 125

Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
               ++Q   P +     G I+ + S A +V  S  + S+Y+ATK  ++Q +R+L  E+ 
Sbjct: 126 SAYHLSQLAHPLLKASGCGNIIFMSSIAGVV--SASVGSIYSATKGALNQLARNLACEWA 183

Query: 228 KSGIDVQC 235
             GI    
Sbjct: 184 SDGIRANA 191

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  119 bits (300), Expect = 1e-32
 Identities = 51/186 (27%), Positives = 80/186 (43%), Gaps = 17/186 (9%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           A+VTG + GIG + A +L   G  +VL  R+ +KL+ V   I A  A  + +S   D S 
Sbjct: 32  AVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVA--AGGEAESHACDLSH 89

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFH----EVDQVLLKNLIKVNVEGT 169
              +      +  A    DV  L+NN G+ +           E D +     I VN++  
Sbjct: 90  SDAIAAFATGVLAAHGRCDV--LVNNAGVGWFGGPLHTMKPAEWDAL-----IAVNLKAP 142

Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
             + +A  P M+  K+G I+NI S A          + Y A+K  ++    S   E R+ 
Sbjct: 143 YLLLRAFAPAMIAAKRGHIINISSLAGKNP--VADGAAYTASKWGLNGLMTSAAEELRQH 200

Query: 230 GIDVQC 235
            + V  
Sbjct: 201 QVRVSL 206

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  119 bits (300), Expect = 1e-32
 Identities = 37/185 (20%), Positives = 74/185 (40%), Gaps = 14/185 (7%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           A+VTG + GIG +    L + G  +    R+ ++L+    +++ ++   ++ + V D   
Sbjct: 11  AVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLD 70

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEV-DQVLLKNLIKVNVEGTT 170
              +    E  +  +      +L+NN G      +A    E   +      +++      
Sbjct: 71  ALQVRAFAEACERTLGCAS--ILVNNAGQGRVSTFAETTDEAWSEE-----LQLKFFSVI 123

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
              +A LP +  R   AIV + S  A     +P     +A +A +    RS+  E+   G
Sbjct: 124 HPVRAFLPQLESRADAAIVCVNSLLASQ--PEPHMVATSAARAGVKNLVRSMAFEFAPKG 181

Query: 231 IDVQC 235
           + V  
Sbjct: 182 VRVNG 186

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  117 bits (296), Expect = 5e-32
 Identities = 48/182 (26%), Positives = 73/182 (40%), Gaps = 14/182 (7%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           A+VTG   G+G++ A  LA  G  + L GR  D L++ +  I           V  D + 
Sbjct: 31  AIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGD-----DALCVPTDVTD 85

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              +        E    +D  VL NN G   P A    ++     K ++  N+ G    T
Sbjct: 86  PDSVRALFTATVEKFGRVD--VLFNNAGTGAP-AIPMEDLTFAQWKQVVDTNLTGPFLCT 142

Query: 174 QAVLPGMLKRKK--GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           Q     M  ++   G I+N GS +A      P  + Y ATK  I   ++S  ++ R   I
Sbjct: 143 QEAFRVMKAQEPRGGRIINNGSISATS--PRPYSAPYTATKHAITGLTKSTSLDGRVHDI 200

Query: 232 DV 233
             
Sbjct: 201 AC 202

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  116 bits (294), Expect = 5e-32
 Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 9/184 (4%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAK-YAKTQIKSVVVDFS 114
            LVTG   GIG + A   A  G ++VL+GR    L +VSD I++    +  I ++ ++ +
Sbjct: 17  ILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENA 76

Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
                 E   R++     LD   L++N  I  P      ++       ++ VNV  T  +
Sbjct: 77  TAQQYRELAARVEHEFGRLD--GLLHNASIIGPRTP-LEQLPDEDFMQVMHVNVNATFML 133

Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR-KSGI 231
           T+A+LP + + +  +I    S           +  Y  +K   +   ++L  E    + +
Sbjct: 134 TRALLPLLKRSEDASIAFTSSSVGRK--GRANWGAYGVSKFATEGLMQTLADELEGVTAV 191

Query: 232 DVQC 235
               
Sbjct: 192 RANS 195

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  118 bits (297), Expect = 6e-32
 Identities = 41/188 (21%), Positives = 74/188 (39%), Gaps = 14/188 (7%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           A VTG  +G+G     QL   G  + +     D +     +++A+ +  ++  V +D + 
Sbjct: 11  AFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVAS 70

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
                   + ++     +   +L NN G++    +   E        L+ VN+ G     
Sbjct: 71  REGFKMAADEVEARFGPVS--ILCNNAGVN--LFQPIEESSYDDWDWLLGVNLHGVVNGV 126

Query: 174 QAVLPGMLKRKK------GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
              +P M++R K      G +VN  S AA +  +     +Y  TK  +   S SL+    
Sbjct: 127 TTFVPRMVERVKAGEQKGGHVVNTASMAAFL--AAGSPGIYNTTKFAVRGLSESLHYSLL 184

Query: 228 KSGIDVQC 235
           K  I V  
Sbjct: 185 KYEIGVSV 192

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  117 bits (295), Expect = 7e-32
 Identities = 49/182 (26%), Positives = 78/182 (42%), Gaps = 10/182 (5%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           ALVTG   G+G+  A  L+  G ++V+ GR PD L   +  I  +     +++VV D   
Sbjct: 36  ALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTG-NIVRAVVCDVGD 94

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              +      ++     LD  +L+NN G + P      EV       ++  N+ G    T
Sbjct: 95  PDQVAALFAAVRAEFARLD--LLVNNAGSNVPPVP-LEEVTFEQWNGIVAANLTGAFLCT 151

Query: 174 QAVLPGMLKR--KKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           Q     M  +  + G I+N GS +A      P  + Y ATK  I   ++S  ++ R   I
Sbjct: 152 QHAFRMMKAQTPRGGRIINNGSISAQT--PRPNSAPYTATKHAITGLTKSTALDGRMHDI 209

Query: 232 DV 233
             
Sbjct: 210 AC 211

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  116 bits (293), Expect = 8e-32
 Identities = 51/184 (27%), Positives = 90/184 (48%), Gaps = 11/184 (5%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            LVTG +DGIG+  A   A+ G  ++L+GRN +KL+ V+  I  +  + Q +  ++D   
Sbjct: 15  ILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGR-QPQWFILDLLT 73

Query: 116 ----DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
               +  +  +RI      LD   +++N G+         E +  + +++++VNV  T  
Sbjct: 74  CTSENCQQLAQRIAVNYPRLD--GVLHNAGLLGDVCP-MSEQNPQVWQDVMQVNVNATFM 130

Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           +TQA+LP +LK   G++V   S           +  YAA+K   +   + L  EY +  +
Sbjct: 131 LTQALLPLLLKSDAGSLVFTSSSVGRQ--GRANWGAYAASKFATEGMMQVLADEY-QQRL 187

Query: 232 DVQC 235
            V C
Sbjct: 188 RVNC 191

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  116 bits (292), Expect = 1e-31
 Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 5/180 (2%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVT  TDGIG + A +LA+ G ++V+  R  + +     ++Q +          V  + 
Sbjct: 17  ALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAE 76

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
           D +  V        G+D  +L++N  ++ P+     +  + +   ++ VNV+ T  +T+A
Sbjct: 77  DRERLVAMAVNLHGGVD--ILVSNAAVN-PFFGNIIDATEEVWDKILHVNVKATVLMTKA 133

Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
           V+P M KR  G+++ + S  A      P    Y  +K  +   +++L VE     I V C
Sbjct: 134 VVPEMEKRGGGSVLIVSSVGAYH--PFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNC 191

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  115 bits (290), Expect = 1e-31
 Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 19/188 (10%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLN-------LVLVGRNPDKLKDVSDSIQAKYAKTQIKS 108
            L+TG   GIG++ A + A+   +       LVL  R    L+ +S   +A+ A T   +
Sbjct: 5   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 64

Query: 109 VVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARF-FHEVDQVLLKNLIKVN 165
             +    D+      I E    +D   L+NN G+      +     + D       +  N
Sbjct: 65  ADISDMADVRRLTTHIVERYGHIDC--LVNNAGVGRFGALSDLTEEDFDYT-----MNTN 117

Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
           ++GT  +TQA+   M ++  G I  I S AA         S+Y  +K        ++ + 
Sbjct: 118 LKGTFFLTQALFALMERQHSGHIFFITSVAATKA--FRHSSIYCMSKFGQRGLVETMRLY 175

Query: 226 YRKSGIDV 233
            RK  + +
Sbjct: 176 ARKCNVRI 183

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  116 bits (292), Expect = 1e-31
 Identities = 57/197 (28%), Positives = 89/197 (45%), Gaps = 15/197 (7%)

Query: 44  RPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAK 103
           +  K++   G   L+TG   GIG+  A++ AK    LVL   N   L++ +   +   AK
Sbjct: 24  KRRKSVT--GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAK 81

Query: 104 TQIKSVVVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNL 161
             + + VVD S   D+    +++K  I G DV +L+NN G+ Y             ++  
Sbjct: 82  --VHTFVVDCSNREDIYSSAKKVKAEI-G-DVSILVNNAGVVY--TSDLFATQDPQIEKT 135

Query: 162 IKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRS 221
            +VNV      T+A LP M K   G IV + S A  V  S P    Y ++K     F ++
Sbjct: 136 FEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV--SVPFLLAYCSSKFAAVGFHKT 193

Query: 222 LYVE---YRKSGIDVQC 235
           L  E    + +G+   C
Sbjct: 194 LTDELAALQITGVKTTC 210

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  115 bits (289), Expect = 3e-31
 Identities = 45/184 (24%), Positives = 74/184 (40%), Gaps = 17/184 (9%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVG--RNPDKLKDVSDSIQAKYAKTQIKSVVVDF 113
            LVTG + GIGKS    L     + V+ G  R+   LK + +    +        VV D 
Sbjct: 5   ILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDR-----FFYVVGDI 59

Query: 114 S--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
           +    L + V    +    +D   L+ N G+  P     +E+D    K L  +N      
Sbjct: 60  TEDSVLKQLVNAAVKGHGKID--SLVANAGVLEPVQN-VNEIDVNAWKKLYDINFFSIVS 116

Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           +    LP  LK+  G +V + S A  +      +  Y ++KA ++ F+ +L  E R   +
Sbjct: 117 LVGIALP-ELKKTNGNVVFVSSDACNM--YFSSWGAYGSSKAALNHFAMTLANEER--QV 171

Query: 232 DVQC 235
               
Sbjct: 172 KAIA 175

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  115 bits (290), Expect = 5e-31
 Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 17/185 (9%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           AL+TG   GIG++ A  LA  G+ +  +GR   ++++V+D I    A  Q  ++  D S 
Sbjct: 31  ALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVG--AGGQAIALEADVSD 88

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEV-----DQVLLKNLIKVNVEG 168
              +   V  +      LD+  ++ N GI+  +A    ++     D+      I VN+ G
Sbjct: 89  ELQMRNAVRDLVLKFGHLDI--VVANAGINGVWAPI-DDLKPFEWDET-----IAVNLRG 140

Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
           T       +P + +R  GAIV + S       + P  + Y ATKA      + L +E  K
Sbjct: 141 TFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGK 200

Query: 229 SGIDV 233
             I V
Sbjct: 201 HHIRV 205

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  114 bits (287), Expect = 5e-31
 Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 15/179 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVTG   GIG+     L  +G  +V V R    L  ++           I+ V VD   
Sbjct: 10  ALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG------IEPVCVDLG- 62

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
           D D   E+    I  +D  +L+NN  +       F EV +        VN+    +V+Q 
Sbjct: 63  DWDA-TEKALGGIGPVD--LLVNNAALVIMQP--FLEVTKEAFDRSFSVNLRSVFQVSQM 117

Query: 176 VLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           V   M+ R   G+IVN+ S  A V  + P    Y++TK  +   ++++ +E     I V
Sbjct: 118 VARDMINRGVPGSIVNVSSMVAHV--TFPNLITYSSTKGAMTMLTKAMAMELGPHKIRV 174

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  114 bits (287), Expect = 7e-31
 Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 7/180 (3%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            L+TG   G+G++ A +LA  G  L LV  + + L+    ++       ++ + V D S 
Sbjct: 16  VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD 75

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              ++  V    E    +D     NN GI                  ++ +N+ G     
Sbjct: 76  EAQVEAYVTATTERFGRID--GFFNNAGIEGKQNP-TESFTAAEFDKVVSINLRGVFLGL 132

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           + VL  M ++  G +VN  S   I        S YAA K  +   +R+  VEY + GI +
Sbjct: 133 EKVLKIMREQGSGMVVNTASVGGIR--GIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRI 190

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  113 bits (286), Expect = 8e-31
 Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 17/183 (9%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           A VTG   GIG       A +G  L+L+ R    L   +  + A  A      +V D + 
Sbjct: 14  AAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAA----RIVADVTD 69

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEV-DQVLLKNLIKVNVEGTT 170
              +        EA+  + +  L+N+ GI+              QV     + VNV+G  
Sbjct: 70  AEAMTAAAAEA-EAVAPVSI--LVNSAGIARLHDALETDDATWRQV-----MAVNVDGMF 121

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
             ++A    M+ R  GAIVN+GS +  ++      S Y A+K  + Q +R+L  E+   G
Sbjct: 122 WASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRG 181

Query: 231 IDV 233
           + V
Sbjct: 182 VRV 184

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  113 bits (286), Expect = 8e-31
 Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 15/179 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            LVTG   GIG+     L  TG  +V V R    L  +            I+ V VD   
Sbjct: 10  VLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG------IEPVCVDLG- 62

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
           D +   ER   ++  +D  +L+NN  ++    + F EV +       +VN+    +V+Q 
Sbjct: 63  DWEA-TERALGSVGPVD--LLVNNAAVALL--QPFLEVTKEAFDRSFEVNLRAVIQVSQI 117

Query: 176 VLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           V  G++ R   GAIVN+ S  +    +   +SVY +TK  +D  ++ + +E     I V
Sbjct: 118 VARGLIARGVPGAIVNVSSQCSQR--AVTNHSVYCSTKGALDMLTKVMALELGPHKIRV 174

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  113 bits (285), Expect = 1e-30
 Identities = 55/184 (29%), Positives = 82/184 (44%), Gaps = 16/184 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           AL+TG T GIG   A   A  G  LVL GR+  +L     ++  ++    + +V +D + 
Sbjct: 23  ALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGT-DVHTVAIDLAE 81

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEV-DQVLLKNLIKVNVEGTT 170
                E   R  EA  GLD  VL+NN GIS+  P      ++ D       I VN+    
Sbjct: 82  PDAPAELARRAAEAFGGLD--VLVNNAGISHPQPVVDTDPQLFDAT-----IAVNLRAPA 134

Query: 171 KVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
            +  AV   M+   + GAI+ + S AA+     P +  Y  +KA +   ++ L  E    
Sbjct: 135 LLASAVGKAMVAAGEGGAIITVASAAALA--PLPDHYAYCTSKAGLVMATKVLARELGPH 192

Query: 230 GIDV 233
           GI  
Sbjct: 193 GIRA 196

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  113 bits (285), Expect = 2e-30
 Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 9/180 (5%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            LVTG    IG + A +LA+ G  + L+  N + L+    S++      + +S V D + 
Sbjct: 10  CLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVRE--KGVEARSYVCDVTS 67

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              +   V+ +      +D   L NN G    +A    +        ++ +NV G   V 
Sbjct: 68  EEAVIGTVDSVVRDFGKIDF--LFNNAGYQGAFAPV-QDYPSDDFARVLTINVTGAFHVL 124

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           +AV   M+ +  G IVN  S A +     P  + Y  +K  I   + +  ++     I V
Sbjct: 125 KAVSRQMITQNYGRIVNTASMAGVK--GPPNMAAYGTSKGAIIALTETAALDLAPYNIRV 182

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  111 bits (281), Expect = 3e-30
 Identities = 37/179 (20%), Positives = 77/179 (43%), Gaps = 16/179 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A+VTG T G+G      L++    +  +GRNP+ L  +++    +  ++     +V    
Sbjct: 8   AVVTGATGGMGIEIVKDLSRDH-IVYALGRNPEHLAALAEIEGVEPIESD----IVK--- 59

Query: 116 DLDEGVERIKEAIEGLD-VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
             +   E   + ++ LD V  L++   ++                  + +NV    ++++
Sbjct: 60  --EVLEEGGVDKLKNLDHVDTLVHAAAVARD--TTIEAGSVAEWHAHLDLNVIVPAELSR 115

Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
            +LP + +   G ++ I SGA       P  ++YAA+K  +   + +   E   +GI V
Sbjct: 116 QLLPAL-RAASGCVIYINSGAGNGP--HPGNTIYAASKHALRGLADAFRKEEANNGIRV 171

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  112 bits (282), Expect = 4e-30
 Identities = 47/186 (25%), Positives = 76/186 (40%), Gaps = 15/186 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            +VTG + GIG+  A QL K G  + + GR+ D L+ V+   Q+     Q   VV D S 
Sbjct: 8   CVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQS--LGGQCVPVVCDSSQ 65

Query: 115 -GDLDEGVERI-KEAIEGLDVGVLINNVGISYPYARF-----FHEVDQVLLKNLIKVNVE 167
             ++    E++ +E    LD  VL+NN               F E    +  ++  V + 
Sbjct: 66  ESEVRSLFEQVDREQQGRLD--VLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLR 123

Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
           G    +      M+   +G IV I S  ++    +     Y   KA  D+ +     E R
Sbjct: 124 GHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNV---PYGVGKAACDKLAADCAHELR 180

Query: 228 KSGIDV 233
           + G+  
Sbjct: 181 RHGVSC 186

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  112 bits (283), Expect = 4e-30
 Identities = 31/177 (17%), Positives = 70/177 (39%), Gaps = 6/177 (3%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           A VTG + GIG + A   A+ G ++ +   +    +      +        K+   + S 
Sbjct: 37  ASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKT--YGVHSKAYKCNISD 94

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              ++E + + ++    +DV   + N G+++         +      +I V++ G    +
Sbjct: 95  PKSVEETISQQEKDFGTIDV--FVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCS 152

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
             +     K  KG+++   S +  ++    L + Y   KA     ++SL +E+    
Sbjct: 153 HNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPFA 209

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  111 bits (281), Expect = 5e-30
 Identities = 47/186 (25%), Positives = 75/186 (40%), Gaps = 23/186 (12%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           A++TG   GIGK  A   A  G ++V+   N D    V D IQ    +    +   D + 
Sbjct: 14  AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQA--FACRCDITS 71

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGIS------YPYARFFHEVDQVLLKNLIKVNVE 167
             +L    +     +  +D+  L+NN G         P A F     +       ++NV 
Sbjct: 72  EQELSALADFAISKLGKVDI--LVNNAGGGGPKPFDMPMADF----RRA-----YELNVF 120

Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
               ++Q V P M K   G I+ I S AA     +   + YA++KA      R++  +  
Sbjct: 121 SFFHLSQLVAPEMEKNGGGVILTITSMAAEN--KNINMTSYASSKAAASHLVRNMAFDLG 178

Query: 228 KSGIDV 233
           +  I V
Sbjct: 179 EKNIRV 184

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  111 bits (281), Expect = 7e-30
 Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 15/180 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           A++TG T GIG + A +    G  + + GR  D L      I           +  D + 
Sbjct: 32  AVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGG-----AVGIQADSAN 86

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
             +LD   E++K     +D  VL  N G          EV +    +    NV+G     
Sbjct: 87  LAELDRLYEKVKAEAGRID--VLFVNAGG-GSMLP-LGEVTEEQYDDTFDRNVKGVLFTV 142

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           Q  LP +   +  ++V  GS A       P +SVYAA+KA +  F+R+  ++ +  GI +
Sbjct: 143 QKALPLL--ARGSSVVLTGSTAGST--GTPAFSVYAASKAALRSFARNWILDLKDRGIRI 198

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  111 bits (280), Expect = 7e-30
 Identities = 49/187 (26%), Positives = 76/187 (40%), Gaps = 22/187 (11%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           A+VTG + GIG + A  L K G  + +   +    + V   ++         +V VD + 
Sbjct: 15  AIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENG-----GFAVEVDVTK 69

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFH----EVDQVLLKNLIKVNVEGT 169
              +D  +++  +A+ G D  +L  N G+S            E D         VN  G 
Sbjct: 70  RASVDAAMQKAIDALGGFD--LLCANAGVS-TMRPAVDITDEEWDFN-----FDVNARGV 121

Query: 170 TKVTQAVLPGMLK-RKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
               Q      L    KG IVN  S AA V    PL + Y+A+K  +  ++++L  E   
Sbjct: 122 FLANQIACRHFLASNTKGVIVNTASLAAKV--GAPLLAHYSASKFAVFGWTQALAREMAP 179

Query: 229 SGIDVQC 235
             I V C
Sbjct: 180 KNIRVNC 186

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  110 bits (278), Expect = 1e-29
 Identities = 42/180 (23%), Positives = 81/180 (45%), Gaps = 14/180 (7%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            ++T    GIG++ A   A+ G  ++    N  KL+++      +       + V+D + 
Sbjct: 9   IILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQ-------TRVLDVTK 61

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
              + +++    +E LDV  L N  G  +       + ++      + +NV     + +A
Sbjct: 62  K--KQIDQFANEVERLDV--LFNVAGFVHH--GTVLDCEEKDWDFSMNLNVRSMYLMIKA 115

Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
            LP ML +K G I+N+ S A+ V        VY+ TKA +   ++S+  ++ + GI   C
Sbjct: 116 FLPKMLAQKSGNIINMSSVASSVK-GVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNC 174

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  110 bits (277), Expect = 2e-29
 Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 9/180 (5%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            +VTG   GIG++ A + A     +V V    D+L  +   ++      ++  V  D S 
Sbjct: 10  VIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRG--MGKEVLGVKADVSK 67

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
             D++E V R  E    +DV  L NN GI         EV   L + ++ VN+      +
Sbjct: 68  KKDVEEFVRRTFETYSRIDV--LCNNAGIMDGVTPV-AEVSDELWERVLAVNLYSAFYSS 124

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           +AV+P MLK+ KG IVN  S A I        + Y   K  +   +RS+   Y   GI  
Sbjct: 125 RAVIPIMLKQGKGVIVNTASIAGIR--GGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRA 182

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  110 bits (278), Expect = 2e-29
 Identities = 47/190 (24%), Positives = 80/190 (42%), Gaps = 26/190 (13%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           ALVTG + GIG+  A  L + G  + +  R+ +   D +  + A       +++  D S 
Sbjct: 32  ALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG---DCQAIPADLSS 88

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARF----FHEVDQVLLKNLIKVNVE 167
                   + + E    LD  +L+NN G S+      +    + +V        +++NV 
Sbjct: 89  EAGARRLAQALGELSARLD--ILVNNAGTSWGAALESYPVSGWEKV--------MQLNVT 138

Query: 168 GTTKVTQAVLPGMLK----RKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
                 Q +LP + +         ++NIGS A I    +  Y+ Y  +KA + Q SR L 
Sbjct: 139 SVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYA-YGPSKAALHQLSRMLA 197

Query: 224 VEYRKSGIDV 233
            E     I+V
Sbjct: 198 KELVGEHINV 207

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  110 bits (278), Expect = 2e-29
 Identities = 39/178 (21%), Positives = 68/178 (38%), Gaps = 8/178 (4%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           A+VTG + GIG++ A   A+ G  +V+  RN + L +++D I       +  ++  D   
Sbjct: 11  AIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAG--GGGEAAALAGDVGD 68

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
               +  VE       GLD     NN G           +     +  +  N+       
Sbjct: 69  EALHEALVELAVRRFGGLD--TAFNNAGALGAMGE-ISSLSVEGWRETLDTNLTSAFLAA 125

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           +  +P +     G++    S            + YAA+KA +    ++L VE    GI
Sbjct: 126 KYQVPAIAALGGGSLTFTSSFVGHTA-GFAGVAPYAASKAGLIGLVQALAVELGARGI 182

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  109 bits (275), Expect = 3e-29
 Identities = 25/185 (13%), Positives = 52/185 (28%), Gaps = 23/185 (12%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           ALVT      G +    L + G  +V    +  D  +      +            +   
Sbjct: 4   ALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTI------ALAEQ 57

Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARF-FHEV-----DQVLLKNLIKVNVEG 168
              +  V+   +  E +D   +++N  I  P  R            Q+      +     
Sbjct: 58  -KPERLVDATLQHGEAIDT--IVSNDYIPRPMNRLPLEGTSEADIRQM-----FEALSIF 109

Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
              + Q+ +  +      +++ I S             +Y   +A       S      +
Sbjct: 110 PILLLQSAIAPLRAAGGASVIFITSSVGKK--PLAYNPLYGPARAATVALVESAAKTLSR 167

Query: 229 SGIDV 233
            GI +
Sbjct: 168 DGILL 172

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  109 bits (275), Expect = 3e-29
 Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 11/181 (6%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           ALVTG   GIGK+ A +L K G  + +   N    K V+  I          +V VD S 
Sbjct: 5   ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHA--VAVKVDVSD 62

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              +   VE+ ++ + G D  V++NN G++         +   ++  +  +NV+G     
Sbjct: 63  RDQVFAAVEQARKTLGGFD--VIVNNAGVAPS--TPIESITPEIVDKVYNINVKGVIWGI 118

Query: 174 QAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
           QA +    K    G I+N  S A  V   +P  +VY+++K  +   +++   +    GI 
Sbjct: 119 QAAVEAFKKEGHGGKIINACSQAGHV--GNPELAVYSSSKFAVRGLTQTAARDLAPLGIT 176

Query: 233 V 233
           V
Sbjct: 177 V 177

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  109 bits (276), Expect = 3e-29
 Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 20/186 (10%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           ALVTG + G+G   A  LA+ G ++V+  RN ++  + +  +  KY   +  +   D S 
Sbjct: 24  ALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV-ETMAFRCDVSN 82

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARF----FHEVDQVLLKNLIKVNVE 167
             ++ + +E +KE    LD   ++N  GI+   P   F    F +V        I+VN+ 
Sbjct: 83  YEEVKKLLEAVKEKFGKLD--TVVNAAGINRRHPAEEFPLDEFRQV--------IEVNLF 132

Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
           GT  V +     + +    +I+NIGS     + + P  S YAA+K  +   +++L  E+ 
Sbjct: 133 GTYYVCREAFSLLRESDNPSIINIGSLTVEEV-TMPNISAYAASKGGVASLTKALAKEWG 191

Query: 228 KSGIDV 233
           + GI V
Sbjct: 192 RYGIRV 197

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  109 bits (276), Expect = 3e-29
 Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 23/188 (12%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           AL+TG + GIGK  A   A+ G  + +  R+ D L+ V+D I     K     +  D + 
Sbjct: 35  ALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKA--LPIRCDVTQ 92

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGIS-------YPYARFFHEVDQVLLKNLIKVNV 166
              +   ++++   + G+D  + + N GI         P   F     ++        NV
Sbjct: 93  PDQVRGMLDQMTGELGGID--IAVCNAGIVSVQAMLDMPLEEF----QRI-----QDTNV 141

Query: 167 EGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
            G     QA    M+ +   G I+   S +  +I      S Y  +KA +   ++++ VE
Sbjct: 142 TGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVE 201

Query: 226 YRKSGIDV 233
                I V
Sbjct: 202 LAPHQIRV 209

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  110 bits (277), Expect = 3e-29
 Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 11/183 (6%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           A+VTG   GIG + A + A+ G  LVL   +   L+   + ++ +        VV D   
Sbjct: 34  AVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGF--DAHGVVCDVRH 91

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
             ++    +     + G+D  V+ +N GI    A    +++    + +I +++ G+    
Sbjct: 92  LDEMVRLADEAFRLLGGVD--VVFSNAGIV--VAGPLAQMNHDDWRWVIDIDLWGSIHAV 147

Query: 174 QAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
           +A LP +L++   G I    S A +V   +     Y   K  +   + +L  E + +GI 
Sbjct: 148 EAFLPRLLEQGTGGHIAFTASFAGLV--PNAGLGTYGVAKYGVVGLAETLAREVKPNGIG 205

Query: 233 VQC 235
           V  
Sbjct: 206 VSV 208

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  110 bits (278), Expect = 4e-29
 Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 18/188 (9%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKT---QIKSVVVD 112
           A+VTG   GIGK+   +L + G N+V+  R  ++LK  +D +QA    T   ++  +  +
Sbjct: 21  AIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCN 80

Query: 113 FS--GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARF-FHEVDQVLLKNLIKVNVE 167
                +++  V+   +    ++   L+NN G  +  P           V     ++ N+ 
Sbjct: 81  IRNEEEVNNLVKSTLDTFGKIN--FLVNNGGGQFLSPAEHISSKGWHAV-----LETNLT 133

Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
           GT  + +AV    +K   G+IVNI           PL     A +A +   ++SL +E+ 
Sbjct: 134 GTFYMCKAVYSSWMKEHGGSIVNI---IVPTKAGFPLAVHSGAARAGVYNLTKSLALEWA 190

Query: 228 KSGIDVQC 235
            SGI + C
Sbjct: 191 CSGIRINC 198

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  109 bits (275), Expect = 4e-29
 Identities = 42/188 (22%), Positives = 82/188 (43%), Gaps = 23/188 (12%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           A+VTG   GIG++ A   AK G ++V+     +  + V+ +I+   A  +   +  + + 
Sbjct: 15  AIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQ--AGGKAIGLECNVTD 72

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGIS------YPYARFFHEVDQVLLKNLIKVNVE 167
               +  ++   +    + V  L+NN G         P + F    +        K+N+ 
Sbjct: 73  EQHREAVIKAALDQFGKITV--LVNNAGGGGPKPFDMPMSDF----EWA-----FKLNLF 121

Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
              +++Q   P M K   GAI+NI S A     ++   + Y ++KA ++  +R++  +  
Sbjct: 122 SLFRLSQLAAPHMQKAGGGAILNISSMAGEN--TNVRMASYGSSKAAVNHLTRNIAFDVG 179

Query: 228 KSGIDVQC 235
             GI V  
Sbjct: 180 PMGIRVNA 187

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  110 bits (276), Expect = 5e-29
 Identities = 52/186 (27%), Positives = 91/186 (48%), Gaps = 16/186 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           A++TG T GIG + A  LAK G N+VL G   PD+++ V+D +    +   +     D +
Sbjct: 28  AVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSS-GTVLHHPADMT 86

Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEV-DQVLLKNLIKVNVEGT 169
              ++ + +  + +   G D+  L+NN G+ +      F  E  D++     I VN+  +
Sbjct: 87  KPSEIADMMAMVADRFGGADI--LVNNAGVQFVEKIEDFPVEQWDRI-----IAVNLSSS 139

Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
               +  +P M K+  G I+NI S   +V  + P  S Y A K  I   ++++ +E  +S
Sbjct: 140 FHTIRGAIPPMKKKGWGRIINIASAHGLV--ASPFKSAYVAAKHGIMGLTKTVALEVAES 197

Query: 230 GIDVQC 235
           G+ V  
Sbjct: 198 GVTVNS 203

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  108 bits (273), Expect = 8e-29
 Identities = 47/192 (24%), Positives = 74/192 (38%), Gaps = 33/192 (17%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           ALVTG   G+G ++A  LA  G  ++L       L +  D++  K        V  D + 
Sbjct: 12  ALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAH--GVAFDVTD 69

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARF----FHEVDQVLLKNLIKVNVE 167
              ++    ++      +D  +LINN GI Y  P        + +V        I  N+ 
Sbjct: 70  ELAIEAAFSKLDAEGIHVD--ILINNAGIQYRKPMVELELENWQKV--------IDTNLT 119

Query: 168 GTTKVTQAVLPGMLKRKK-GAIVNIGS-----GAAIVIPSDPLYSVYAATKAYIDQFSRS 221
               V+++    M+ R   G I+NIGS         V P       Y A K  I   + S
Sbjct: 120 SAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAP-------YTAAKGGIKMLTCS 172

Query: 222 LYVEYRKSGIDV 233
           +  E+ +  I  
Sbjct: 173 MAAEWAQFNIQT 184

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  108 bits (272), Expect = 9e-29
 Identities = 43/182 (23%), Positives = 73/182 (40%), Gaps = 21/182 (11%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           ALVTG + GIG++ A  L   G  + +  RNP++                   +  D   
Sbjct: 5   ALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAA----------QSLGAVPLPTDLEK 54

Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEV-DQVLLKNLIKVNVEGTTK 171
            D    V+R  EA+ GL V  L++   ++   P     +E   +V     + ++++    
Sbjct: 55  DDPKGLVKRALEALGGLHV--LVHAAAVNVRKPALELSYEEWRRV-----LYLHLDVAFL 107

Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           + QA  P M +   G ++ IGS              Y   K  +   +R+L  E+ + GI
Sbjct: 108 LAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGI 167

Query: 232 DV 233
            V
Sbjct: 168 RV 169

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  108 bits (273), Expect = 1e-28
 Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 15/180 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI--QAKYAKTQIKSVVVDF 113
           A++TG   GIG   +  LA+ G  +VL       L   + S+   A +        VVD 
Sbjct: 14  AIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVH-------HVVDL 66

Query: 114 S--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
           +    +   ++   +    LD+  + NN   S P      ++   +  +   VN  GT  
Sbjct: 67  TNEVSVRALIDFTIDTFGRLDI--VDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTML 124

Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           + +  +P ++    GAIVNI S  A    +  + + YA TKA I+  +R +  +Y + G+
Sbjct: 125 MCKYAIPRLISAGGGAIVNISSATAHA--AYDMSTAYACTKAAIETLTRYVATQYGRHGV 182

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  109 bits (274), Expect = 1e-28
 Identities = 39/189 (20%), Positives = 76/189 (40%), Gaps = 22/189 (11%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           A +TG   G+GK     L+  G   V+  R  D LK  ++ I ++    ++ ++  D   
Sbjct: 29  AFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN-KVHAIQCDVRD 87

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARF----FHEVDQVLLKNLIKVNVE 167
              +   V  + +     +  ++INN   ++  P  R     +  +          + + 
Sbjct: 88  PDMVQNTVSELIKVAGHPN--IVINNAAGNFISPTERLSPNAWKTI--------TDIVLN 137

Query: 168 GTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
           GT  VT  +   ++K +K  A ++I +  A            A+ KA ++  S+SL  E+
Sbjct: 138 GTAFVTLEIGKQLIKAQKGAAFLSITTIYAET--GSGFVVPSASAKAGVEAMSKSLAAEW 195

Query: 227 RKSGIDVQC 235
            K G+    
Sbjct: 196 GKYGMRFNV 204

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  108 bits (271), Expect = 1e-28
 Identities = 44/183 (24%), Positives = 75/183 (40%), Gaps = 21/183 (11%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
               LV   + GIG++ A  L++ G  + +  RN + LK                     
Sbjct: 19  DKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVV------------- 65

Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
              DL + ++ + E ++ +D  +L+ N G   P A FF E+     K  I        K+
Sbjct: 66  --CDLRKDLDLLFEKVKEVD--ILVLNAGG--PKAGFFDELTNEDFKEAIDSLFLNMIKI 119

Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
            +  LP M ++  G IV I S  +++ P + L     + +  +  F ++L  E    GI 
Sbjct: 120 VRNYLPAMKEKGWGRIVAITS-FSVISPIENL-YTSNSARMALTGFLKTLSFEVAPYGIT 177

Query: 233 VQC 235
           V C
Sbjct: 178 VNC 180

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  108 bits (271), Expect = 1e-28
 Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 19/182 (10%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           A+V G T G+G +   +L + G  ++L GRN   +  + +    +     + ++  D + 
Sbjct: 11  AIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPR-----VHALRSDIAD 65

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARF--FHEVDQVLLKNLIKVNVEGTTK 171
             ++        + +  +D  +L  N G+    +    F +V +        VN +G   
Sbjct: 66  LNEIAVLGAAAGQTLGAID--LLHINAGV----SELEPFDQVSEASYDRQFAVNTKGAFF 119

Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
             Q + P +  R+ G+IV   S A       P  SVY+A+KA +  F+  L  E    GI
Sbjct: 120 TVQRLTPLI--REGGSIVFTSSVADEG--GHPGMSVYSASKAALVSFASVLAAELLPRGI 175

Query: 232 DV 233
            V
Sbjct: 176 RV 177

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  108 bits (272), Expect = 1e-28
 Identities = 39/187 (20%), Positives = 70/187 (37%), Gaps = 31/187 (16%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK-------DVSDSIQAKYAKTQIKS 108
           ALVTG   GIG +    L   G  + +  R    +        D+ ++            
Sbjct: 31  ALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHLPGDLREA------------ 78

Query: 109 VVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
                    D     +   +  LD+  ++NN G+         E         + VNVE 
Sbjct: 79  ------AYADGLPGAVAAGLGRLDI--VVNNAGVISR--GRITETTDADWSLSLGVNVEA 128

Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
             ++ +A +P M     GAIVN+ S   +     P +++Y  TKA +   ++ + +++  
Sbjct: 129 PFRICRAAIPLMAAAGGGAIVNVASCWGLR--PGPGHALYCLTKAALASLTQCMGMDHAP 186

Query: 229 SGIDVQC 235
            GI +  
Sbjct: 187 QGIRINA 193

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  107 bits (271), Expect = 2e-28
 Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 14/181 (7%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           AL+TG   GIG++FA    + G  + +   + ++ +  +  I          +V +D + 
Sbjct: 11  ALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPA-----AYAVQMDVTR 65

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              +D  +    E   GLD  +L+NN  +         E+ +   + L  +NV GT    
Sbjct: 66  QDSIDAAIAATVEHAGGLD--ILVNNAALFDL--APIVEITRESYEKLFAINVAGTLFTL 121

Query: 174 QAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
           QA    M+ + + G I+N+ S A      + L ++Y ATKA +   ++S  ++  K  I+
Sbjct: 122 QAAARQMIAQGRGGKIINMASQAGRR--GEALVAIYCATKAAVISLTQSAGLDLIKHRIN 179

Query: 233 V 233
           V
Sbjct: 180 V 180

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  108 bits (272), Expect = 2e-28
 Identities = 37/188 (19%), Positives = 69/188 (36%), Gaps = 21/188 (11%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           A +TG   GIG   A    + G + V+  R+  ++   +  +       +   + +D   
Sbjct: 30  AFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG-RRCLPLSMDVRA 88

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARF----FHEVDQVLLKNLIKVNVE 167
              +   V++  +    +D  +LIN    ++  P        F  V        + ++  
Sbjct: 89  PPAVMAAVDQALKEFGRID--ILINCAAGNFLCPAGALSFNAFKTV--------MDIDTS 138

Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
           GT  V++ +     +   G IVNI +          L     + KA +D  +R L VE+ 
Sbjct: 139 GTFNVSRVLYEKFFRDHGGVIVNITATLGNR--GQALQVHAGSAKAAVDAMTRHLAVEWG 196

Query: 228 KSGIDVQC 235
              I V  
Sbjct: 197 PQNIRVNS 204

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  107 bits (270), Expect = 3e-28
 Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            +VTG   GIG++ A   AK G  +V+   N D    V++ I +K        V VD S 
Sbjct: 30  CIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSK-----AFGVRVDVSS 84

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
             D +  VE+       +DV  L+NN G           + +     ++ VNV+G    +
Sbjct: 85  AKDAESMVEKTTAKWGRVDV--LVNNAGFGTT--GNVVTIPEETWDRIMSVNVKGIFLCS 140

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           + V+P M +   G+I+N  S  A    +    + Y A+K  I   +R++ +++ K GI V
Sbjct: 141 KYVIPVMRRNGGGSIINTTSYTATS--AIADRTAYVASKGAISSLTRAMAMDHAKEGIRV 198

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  107 bits (269), Expect = 3e-28
 Identities = 54/188 (28%), Positives = 76/188 (40%), Gaps = 26/188 (13%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            +VTG   GIG+++A  LA+ G  +V+   N +  + V+  I A        SV VD S 
Sbjct: 12  GIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTA--ISVAVDVSD 69

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
                   +R      G+D   L+NN  I              LL          + VN+
Sbjct: 70  PESAKAMADRTLAEFGGIDY--LVNNAAIFGGMK------LDFLLTIDPEYYKKFMSVNL 121

Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV-YAATKAYIDQFSRSLYVE 225
           +G    T+AV   M KR  GAIVN  S AA +      YS  Y   K  I+  ++ L  E
Sbjct: 122 DGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL------YSNYYGLAKVGINGLTQQLSRE 175

Query: 226 YRKSGIDV 233
                I +
Sbjct: 176 LGGRNIRI 183

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  106 bits (268), Expect = 4e-28
 Identities = 46/189 (24%), Positives = 74/189 (39%), Gaps = 23/189 (12%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           ALVTG + G+GK+ A +LA+ G N+V+   R+     + ++ I+    K     V  +  
Sbjct: 7   ALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKV--LVVKANVG 64

Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARF----FHEVDQVLLKNLIKVNV 166
               + E  ++I E    LDV   +NN       P        +           + +N 
Sbjct: 65  QPAKIKEMFQQIDETFGRLDV--FVNNAASGVLRPVMELEETHWDWT--------MNINA 114

Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
           +      Q     M K   G IV+I S  +I       Y+    +KA ++  +R L VE 
Sbjct: 115 KALLFCAQEAAKLMEKNGGGHIVSISSLGSIR--YLENYTTVGVSKAALEALTRYLAVEL 172

Query: 227 RKSGIDVQC 235
               I V  
Sbjct: 173 SPKQIIVNA 181

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score =  107 bits (270), Expect = 7e-28
 Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 10/183 (5%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKT---QIKSVVVD 112
            L+TG + G G+  A  LA  G  +    R+       +    A +A+     ++++ +D
Sbjct: 8   ILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELD 67

Query: 113 FS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
                 +D  +++I      +DV  LI+N G  +                L  +NV  T 
Sbjct: 68  VQSQVSVDRAIDQIIGEDGRIDV--LIHNAG--HMVFGPAEAFTPEQFAELYDINVLSTQ 123

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
           +V +A LP M ++K G ++ I S ++    + P  + Y A KA +D  +     E  + G
Sbjct: 124 RVNRAALPHMRRQKHGLLIWISSSSS-AGGTPPYLAPYFAAKAAMDAIAVQYARELSRWG 182

Query: 231 IDV 233
           I+ 
Sbjct: 183 IET 185

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  106 bits (266), Expect = 1e-27
 Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 14/181 (7%)

Query: 55  WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           W LVTG + G G++ A      G  ++   R  + L D    + A Y   + +++ +D +
Sbjct: 8   W-LVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDD----LVAAYP-DRAEAISLDVT 61

Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
               +D     +      +DV  L+NN G        F E  +  L++L +++V G  ++
Sbjct: 62  DGERIDVVAADVLARYGRVDV--LVNNAG--RTQVGAFEETTERELRDLFELHVFGPARL 117

Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
           T+A+LP M +R  G++VNI S    +  S   +S Y+ATKA ++Q S  L  E    GI 
Sbjct: 118 TRALLPQMRERGSGSVVNISSFGGQL--SFAGFSAYSATKAALEQLSEGLADEVAPFGIK 175

Query: 233 V 233
           V
Sbjct: 176 V 176

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  105 bits (264), Expect = 1e-27
 Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 8/181 (4%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           A+VTG + G G + A +    G  +  +  + + L++ + +    YA  ++  V  D + 
Sbjct: 5   AIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYA-DKVLRVRADVAD 63

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYAR-FFHEVDQVLLKNLIKVNVEGTTKV 172
            GD++  +    E    +DV  L+NN GI+        H         ++ VNV G    
Sbjct: 64  EGDVNAAIAATMEQFGAIDV--LVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLG 121

Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
            +AVLP ML +  G IVNI S A++V  + P  S Y  +K  + Q ++S+ V+Y  SGI 
Sbjct: 122 CRAVLPHMLLQGAGVIVNIASVASLV--AFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIR 179

Query: 233 V 233
            
Sbjct: 180 C 180

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  105 bits (264), Expect = 1e-27
 Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 18/185 (9%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            ++TG + G+GK  A + AK G  +V+ GR  +KL++    I+      QI +V +D   
Sbjct: 9   VIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQ--FPGQILTVQMDVRN 66

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARF-FHEVDQVLLKNLIKVNVEGTT 170
             D+ + +E+I E    +D  +LINN   ++  P      +  + V     I + + GT 
Sbjct: 67  TDDIQKMIEQIDEKFGRID--ILINNAAGNFICPAEDLSVNGWNSV-----INIVLNGTF 119

Query: 171 KVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY-RK 228
             +QA+    +++  KG I+N+ +  A    + P     AA KA +   +++L VE+ RK
Sbjct: 120 YCSQAIGKYWIEKGIKGNIINMVATYAWD--AGPGVIHSAAAKAGVLAMTKTLAVEWGRK 177

Query: 229 SGIDV 233
            GI V
Sbjct: 178 YGIRV 182

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  105 bits (264), Expect = 2e-27
 Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 16/186 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           A+VTG T GIG   A  LA  G ++VL G     +++ V   + A++   ++     D S
Sbjct: 7   AVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG-VKVLYDGADLS 65

Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEV-DQVLLKNLIKVNVEGT 169
               +   V+     +  +D+  L+NN GI +      F  E  D +     + +N+   
Sbjct: 66  KGEAVRGLVDNAVRQMGRIDI--LVNNAGIQHTALIEDFPTEKWDAI-----LALNLSAV 118

Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
              T A LP M K+  G I+NI S   +V  +    S Y A K  +  F++   +E    
Sbjct: 119 FHGTAAALPHMKKQGFGRIINIASAHGLV--ASANKSAYVAAKHGVVGFTKVTALETAGQ 176

Query: 230 GIDVQC 235
           GI    
Sbjct: 177 GITANA 182

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  105 bits (264), Expect = 2e-27
 Identities = 45/189 (23%), Positives = 75/189 (39%), Gaps = 22/189 (11%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A VTG + GIG + A  LA  G+ +    R+   +    D ++A        S  V  + 
Sbjct: 27  AFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTD 86

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNVEG 168
           ++   V    E    +   +L+N+ G +                       +++  N+ G
Sbjct: 87  EVHAAVAAAVERFGPIG--ILVNSAGRN---------GGGETADLDDALWADVLDTNLTG 135

Query: 169 TTKVTQAVLP--GMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
             +VT+ VL   GM +   G IVNI S            + Y A+K  +  F++S+  E 
Sbjct: 136 VFRVTREVLRAGGMREAGWGRIVNIASTGGKQ--GVMYAAPYTASKHGVVGFTKSVGFEL 193

Query: 227 RKSGIDVQC 235
            K+GI V  
Sbjct: 194 AKTGITVNA 202

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  104 bits (263), Expect = 3e-27
 Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 13/183 (7%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLV--GRNPDKLKDVSDSIQAKYAKTQIKSVVVDF 113
           A+VTG   GIG+  + +LA  G ++ +    +  ++  +    I+A   K     V +D 
Sbjct: 5   AMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKA--VFVGLDV 62

Query: 114 S--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
           +   + D  ++   E + G D  VL+NN GI+    +   EV +  LK +  VNV     
Sbjct: 63  TDKANFDSAIDEAAEKLGGFD--VLVNNAGIAQI--KPLLEVTEEDLKQIYSVNVFSVFF 118

Query: 172 VTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
             QA      +   KG I+N  S AAI     P+ S Y+ TK  +   +++   E    G
Sbjct: 119 GIQAASRKFDELGVKGKIINAASIAAIQ--GFPILSAYSTTKFAVRGLTQAAAQELAPKG 176

Query: 231 IDV 233
             V
Sbjct: 177 HTV 179

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  104 bits (262), Expect = 3e-27
 Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 21/185 (11%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           ALVTG   GIG++FA  L   G  + LV  N +       ++  ++   +   +  D + 
Sbjct: 10  ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD 69

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              L +   ++ +    LD  +L+NN G++     +    ++      +++N+      T
Sbjct: 70  QQQLRDTFRKVVDHFGRLD--ILVNNAGVNNE-KNW----EKT-----LQINLVSVISGT 117

Query: 174 QAVLPGMLKRKKG---AIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRS--LYVEYRK 228
              L  M K+  G    I+N+ S A ++        VY A+K  I  F+RS  L      
Sbjct: 118 YLGLDYMSKQNGGEGGIIINMSSLAGLM--PVAQQPVYCASKHGIVGFTRSAALAANLMN 175

Query: 229 SGIDV 233
           SG+ +
Sbjct: 176 SGVRL 180

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  104 bits (261), Expect = 5e-27
 Identities = 46/188 (24%), Positives = 72/188 (38%), Gaps = 29/188 (15%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            ++TG + GIG             +V   R+               A   I +V  D S 
Sbjct: 31  VVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS-----------ADPDIHTVAGDISK 79

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEV-----DQVLLKNLIKVNVEG 168
               D  V    E    +D   L+NN G+     + F E+     D       + VNV G
Sbjct: 80  PETADRIVREGIERFGRIDS--LVNNAGVFLA--KPFVEMTQEDYDHN-----LGVNVAG 130

Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
              +TQ     MLK+  G IV+I +      +   P   + + TK  ++  +RSL +E+ 
Sbjct: 131 FFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSA-LASLTKGGLNAVTRSLAMEFS 189

Query: 228 KSGIDVQC 235
           +SG+ V  
Sbjct: 190 RSGVRVNA 197

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  104 bits (262), Expect = 5e-27
 Identities = 51/182 (28%), Positives = 75/182 (41%), Gaps = 17/182 (9%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI--QAKYAKTQIKSVVVDF 113
           A+VTG   GIG + A +LA  G +++    + D     +  I   A           VD 
Sbjct: 32  AIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAA-------CRVDV 84

Query: 114 S--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
           S    +   V+    A  G+D   L+ N G+ +       +        +I +N+ G   
Sbjct: 85  SDEQQIIAMVDACVAAFGGVDK--LVANAGVVHL--ASLIDTTVEDFDRVIAINLRGAWL 140

Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
            T+   P M++R  GAIVN+ S A  V  +      Y  +KA I Q SR    E R SGI
Sbjct: 141 CTKHAAPRMIERGGGAIVNLSSLAGQV--AVGGTGAYGMSKAGIIQLSRITAAELRSSGI 198

Query: 232 DV 233
             
Sbjct: 199 RS 200

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  103 bits (260), Expect = 6e-27
 Identities = 50/185 (27%), Positives = 75/185 (40%), Gaps = 18/185 (9%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           ALVTG T GIG   A  LA+ G N+VL G            I       +      D S 
Sbjct: 7   ALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIAR--HGVKAVHHPADLSD 62

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEV-DQVLLKNLIKVNVEGTT 170
              ++      +    G+D+  L+NN GI +  P  +F  E  D++     I +N+    
Sbjct: 63  VAQIEALFALAEREFGGVDI--LVNNAGIQHVAPVEQFPLESWDKI-----IALNLSAVF 115

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
             T+  LPGM  R  G I+NI S   +V       + Y A K  +   ++ + +E   S 
Sbjct: 116 HGTRLALPGMRARNWGRIINIASVHGLV--GSTGKAAYVAAKHGVVGLTKVVGLETATSN 173

Query: 231 IDVQC 235
           +    
Sbjct: 174 VTCNA 178

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  103 bits (259), Expect = 6e-27
 Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 20/186 (10%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           A++TG  +GIG++ A + A  G ++ +    P    +   +I+      ++ +V  D S 
Sbjct: 10  AVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRN--LGRRVLTVKCDVSQ 65

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFH----EVDQVLLKNLIKVNVEGT 169
            GD++   +++       D+  L+NN GI YP   F      +  +       ++NV+  
Sbjct: 66  PGDVEAFGKQVISTFGRCDI--LVNNAGI-YPLIPFDELTFEQWKKT-----FEINVDSG 117

Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
             + +A +PGM +   G I+N+ S    +      Y+ Y +TKA    F+R+L  +  K 
Sbjct: 118 FLMAKAFVPGMKRNGWGRIINLTSTTYWL--KIEAYTHYISTKAANIGFTRALASDLGKD 175

Query: 230 GIDVQC 235
           GI V  
Sbjct: 176 GITVNA 181

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  103 bits (260), Expect = 7e-27
 Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 16/184 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           AL+TG   G G+  A + AK G  +V+V R+    + V+  I          +V  D S 
Sbjct: 12  ALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDA-----ALAVAADISK 66

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
             D+D  VE        +D  +L+NN GI +   +    V+      ++ VNV G   +T
Sbjct: 67  EADVDAAVEAALSKFGKVD--ILVNNAGIGHK-PQNAELVEPEEFDRIVGVNVRGVYLMT 123

Query: 174 QAVLPGMLKRKKGA----IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
             ++P   +         I+N+ S  A      P  + Y ATK ++   +++L +E   +
Sbjct: 124 SKLIPHFKENGAKGQECVILNVASTGAGR--PRPNLAWYNATKGWVVSVTKALAIELAPA 181

Query: 230 GIDV 233
            I V
Sbjct: 182 KIRV 185

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  102 bits (258), Expect = 1e-26
 Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 22/188 (11%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVTG + GIG   A  LA  G  +V    +    +   +S++ K  K +   + +    
Sbjct: 8   ALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIE 67

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNVEG 168
            +      IK     +D  +L+NN GI+    R     D ++++       ++I  N+  
Sbjct: 68  SIQNFFAEIKAENLAID--ILVNNAGIT----R-----DNLMMRMSEDEWQSVINTNLSS 116

Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
             ++++  + GM+K++ G I++IGS   +V    +P  + Y A KA +  FS+SL  E  
Sbjct: 117 IFRMSKECVRGMMKKRWGRIISIGS---VVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVA 173

Query: 228 KSGIDVQC 235
              I V  
Sbjct: 174 SRNITVNV 181

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  102 bits (258), Expect = 1e-26
 Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 26/185 (14%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            LVTG   GIG++ A   A+ G  + L    P+  K+V+++I   +         VD   
Sbjct: 9   VLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGGAF-------FQVDLED 60

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEV-----DQVLLKNLIKVNVEG 168
             +    VE    A+  +DV  L+NN  I+ P       V      +V     ++VN+  
Sbjct: 61  ERERVRFVEEAAYALGRVDV--LVNNAAIAAP--GSALTVRLPEWRRV-----LEVNLTA 111

Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
              ++      M K   GAIVN+ S   +   ++   + Y A+K  +   +RSL ++   
Sbjct: 112 PMHLSALAAREMRKVGGGAIVNVASVQGLF--AEQENAAYNASKGGLVNLTRSLALDLAP 169

Query: 229 SGIDV 233
             I V
Sbjct: 170 LRIRV 174

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  102 bits (256), Expect = 3e-26
 Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 30/189 (15%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A+VTG   GIG++ A   A+ G +++  GR  D +K+V+D I       +   VV D + 
Sbjct: 34  AVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEA--VVADLAD 90

Query: 116 DLDEGVERIKEAIE---GLDVGVLINNVGISY--PYARFFHEV-DQVLLKNLIKVNVEGT 169
              EG   + E +     +DV  L+NN GI    P          +V     + VN++  
Sbjct: 91  L--EGAANVAEELAATRRVDV--LVNNAGIIARAPAEEVSLGRWREV-----LTVNLDAA 141

Query: 170 TKVTQAVLPGMLKRKKGAIVNIGS-----GAAIVIPSDPLYSVYAATKAYIDQFSRSLYV 224
             ++++    ML    G IV I S     G   V         YAA+K  +   +R+L  
Sbjct: 142 WVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAA-------YAASKHAVVGLTRALAS 194

Query: 225 EYRKSGIDV 233
           E+   G+ V
Sbjct: 195 EWAGRGVGV 203

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  101 bits (255), Expect = 4e-26
 Identities = 37/180 (20%), Positives = 73/180 (40%), Gaps = 14/180 (7%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            +VTG   GIG         +G  +V+  ++    + +   +           ++ D + 
Sbjct: 12  VVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVF------ILCDVTQ 65

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
             D+   V         LD   ++NN G   P  R   E      + L+++N+ GT  +T
Sbjct: 66  EDDVKTLVSETIRRFGRLD--CVVNNAGHHPPPQR-PEETSAQGFRQLLELNLLGTYTLT 122

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           +  LP + ++ +G ++NI S    +         Y ATK  +   +++L ++    G+ V
Sbjct: 123 KLALPYL-RKSQGNVINISSLVGAI--GQAQAVPYVATKGAVTAMTKALALDESPYGVRV 179

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  101 bits (255), Expect = 4e-26
 Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 26/191 (13%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           ALVTG T GIG   A +L K GL + +  R  + L+     ++   A  +      D   
Sbjct: 25  ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE--AGVEADGRTCDVRS 82

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
             +++  V  + E    +D  VL+NN G                 +       ++++ N+
Sbjct: 83  VPEIEALVAAVVERYGPVD--VLVNNAGRP----G-----GGATAELADELWLDVVETNL 131

Query: 167 EGTTKVTQAVLP--GMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYV 224
            G  +VT+ VL   GML+R  G IVNI S            + Y+A+K  +  F+++L +
Sbjct: 132 TGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ--GVVHAAPYSASKHGVVGFTKALGL 189

Query: 225 EYRKSGIDVQC 235
           E  ++GI V  
Sbjct: 190 ELARTGITVNA 200

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  101 bits (255), Expect = 6e-26
 Identities = 49/190 (25%), Positives = 88/190 (46%), Gaps = 26/190 (13%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           ALVTG   GIG+  A  LAK+  +++ + R       V D I++     +      D S 
Sbjct: 47  ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKS--FGYESSGYAGDVSK 104

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
             ++ E + +I    + +D  +L+NN GI+    R     D + L+       ++++ N+
Sbjct: 105 KEEISEVINKILTEHKNVD--ILVNNAGIT----R-----DNLFLRMKNDEWEDVLRTNL 153

Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYVE 225
                +TQ +   M+  + G I+NI S   IV +  +   + Y+++KA +  F++SL  E
Sbjct: 154 NSLFYITQPISKRMINNRYGRIINISS---IVGLTGNVGQANYSSSKAGVIGFTKSLAKE 210

Query: 226 YRKSGIDVQC 235
                I V  
Sbjct: 211 LASRNITVNA 220

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  101 bits (253), Expect = 7e-26
 Identities = 51/191 (26%), Positives = 72/191 (37%), Gaps = 26/191 (13%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            +VTG T GIG+  A   A+ G N+ + GR+   +      +    +  ++  V  D S 
Sbjct: 13  VVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGS-GKVIGVQTDVSD 71

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
               D    R  E   G+DV  +  N G+           D  L          +  VNV
Sbjct: 72  RAQCDALAGRAVEEFGGIDV--VCANAGVF---------PDAPLATMTPEQLNGIFAVNV 120

Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV--IPSDPLYSVYAATKAYIDQFSRSLYV 224
            GT    QA L  ++    G +V   S   I   I   P +S Y ATKA    F R+  +
Sbjct: 121 NGTFYAVQACLDALIASGSGRVVLTSS---ITGPITGYPGWSHYGATKAAQLGFMRTAAI 177

Query: 225 EYRKSGIDVQC 235
           E     I V  
Sbjct: 178 ELAPHKITVNA 188

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  101 bits (253), Expect = 7e-26
 Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 20/173 (11%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           A+VTG + GIG +    L + G  +V V  +     +VSD  +             D + 
Sbjct: 17  AIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFKI------------DVTN 64

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
             ++ E VE+  +    +D+  L+NN GI        H     + + +I VNV G+  + 
Sbjct: 65  EEEVKEAVEKTTKKYGRIDI--LVNNAGIEQY--SPLHLTPTEIWRRIIDVNVNGSYLMA 120

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
           +  +P ML    G+I+NI S  +    +    + Y  +K  +   +RS+ ++Y
Sbjct: 121 KYTIPVMLAIGHGSIINIASVQSYA--ATKNAAAYVTSKHALLGLTRSVAIDY 171

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  101 bits (253), Expect = 8e-26
 Identities = 38/196 (19%), Positives = 75/196 (38%), Gaps = 29/196 (14%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-------PDKLKDVSDSIQAKYAKTQIKS 108
             +TG + GIG + A + A+ G N+ +  ++       P  +   + ++ A  A  Q  +
Sbjct: 9   LFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNA--AGGQGLA 66

Query: 109 VVVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISY-------PYARFFHEVDQVLLK 159
           +  D      +   V    +   G+D+  L+NN    +       P  RF    D +   
Sbjct: 67  LKCDIREEDQVRAAVAATVDTFGGIDI--LVNNASAIWLRGTLDTPMKRF----DLM--- 117

Query: 160 NLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFS 219
              +VN  G+    QA LP +L+     I+ +    ++       ++ Y   K  +   +
Sbjct: 118 --QQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVT 175

Query: 220 RSLYVEYRKSGIDVQC 235
             L  E+   G+ +  
Sbjct: 176 LGLAAEFGPQGVAINA 191

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  101 bits (254), Expect = 9e-26
 Identities = 51/191 (26%), Positives = 79/191 (41%), Gaps = 26/191 (13%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            LVTG T GIG+  A   A+ G N+ +  R+P +L  V+  +    A   +  V +D S 
Sbjct: 44  VLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGA-GNVIGVRLDVSD 102

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
            G   +    + +A   LDV  +  N GI           +  L          ++ VNV
Sbjct: 103 PGSCADAARTVVDAFGALDV--VCANAGIF----P-----EARLDTMTPEQLSEVLDVNV 151

Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV--IPSDPLYSVYAATKAYIDQFSRSLYV 224
           +GT    QA L  +    +G ++   S   I   +   P +S Y A+KA    F R+  +
Sbjct: 152 KGTVYTVQACLAPLTASGRGRVILTSS---ITGPVTGYPGWSHYGASKAAQLGFMRTAAI 208

Query: 225 EYRKSGIDVQC 235
           E    G+ V  
Sbjct: 209 ELAPRGVTVNA 219

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  100 bits (251), Expect = 1e-25
 Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 22/187 (11%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
            ++TG + G+GKS A + A     +V+  R   D+   V + I+      +  +V  D +
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKK--VGGEAIAVKGDVT 67

Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEV-----DQVLLKNLIKVNVE 167
              D+   V+   +    LD  V+INN G+  P +   HE+     ++V     I  N+ 
Sbjct: 68  VESDVINLVQSAIKEFGKLD--VMINNAGLENPVS--SHEMSLSDWNKV-----IDTNLT 118

Query: 168 GTTKVTQAVLPGMLK-RKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
           G    ++  +   ++   KG ++N+ S    +    PL+  YAA+K  +   + +L +EY
Sbjct: 119 GAFLGSREAIKYFVENDIKGTVINMSSVHEKI--PWPLFVHYAASKGGMKLMTETLALEY 176

Query: 227 RKSGIDV 233
              GI V
Sbjct: 177 APKGIRV 183

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  100 bits (251), Expect = 1e-25
 Identities = 33/185 (17%), Positives = 66/185 (35%), Gaps = 24/185 (12%)

Query: 56  ALVTGPTD--GIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
            +VTG +   G+G   A   A+ G  + +         ++    ++  Y   + K+    
Sbjct: 23  VVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY-GIKAKAYKCQ 81

Query: 113 FS--GDLDEGVERIKEAIEGLDVGVLINNVGIS-------YPYARFFHEVDQVLLKNLIK 163
                  ++ V+ +      +D    I N G +            +    + V     ++
Sbjct: 82  VDSYESCEKLVKDVVADFGQIDA--FIANAGATADSGILDGSVEAW----NHV-----VQ 130

Query: 164 VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
           V++ GT    +AV     +R  G++V   S +  +       + Y   KA     +RSL 
Sbjct: 131 VDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLA 190

Query: 224 VEYRK 228
            E+R 
Sbjct: 191 NEWRD 195

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  100 bits (250), Expect = 1e-25
 Identities = 27/186 (14%), Positives = 48/186 (25%), Gaps = 33/186 (17%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK------DVSDSIQAKYAKTQIKSV 109
            LV G +  +G            N + +    +           S   + K         
Sbjct: 25  ILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHSFTIKDSGEEEIKSV------- 77

Query: 110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
                      +E+I      +D    +   G          +     +K +I +N+   
Sbjct: 78  -----------IEKINSKSIKVD--TFVCAAGGWSGGNA-SSDEFLKSVKGMIDMNLYSA 123

Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY--R 227
                     +   + G  V  G+ AA+          Y ATKA      + L  E    
Sbjct: 124 FASAHIGAKLL--NQGGLFVLTGASAALNRT--SGMIAYGATKAATHHIIKDLASENGGL 179

Query: 228 KSGIDV 233
            +G   
Sbjct: 180 PAGSTS 185

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  101 bits (254), Expect = 2e-25
 Identities = 42/189 (22%), Positives = 75/189 (39%), Gaps = 16/189 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKS------- 108
             +TG + GIGK+ A + AK G N+V+  +       +  +I    A  +I++       
Sbjct: 48  VFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYT--AAEEIEAVGGKALP 105

Query: 109 VVVD--FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNV 166
            +VD      +   VE+  +   G+D+  L+NN            +     L  ++ VN 
Sbjct: 106 CIVDVRDEQQISAAVEKAIKKFGGIDI--LVNNASAISL--TNTLDTPTKRLDLMMNVNT 161

Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
            GT   ++A +P + K K   I+NI     +       +  Y   K  +  +   +  E+
Sbjct: 162 RGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEF 221

Query: 227 RKSGIDVQC 235
            K  I V  
Sbjct: 222 -KGEIAVNA 229

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 99.5 bits (249), Expect = 2e-25
 Identities = 46/188 (24%), Positives = 85/188 (45%), Gaps = 29/188 (15%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           +L+TG + GIG + A  L K G  +++ G N +KLK + ++++           V + + 
Sbjct: 17  SLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDN-----YTIEVCNLAN 71

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLL-------KNLIKVNVEG 168
              E    +      LD  +L+ N GI+          D + +         +I +N++ 
Sbjct: 72  --KEECSNLISKTSNLD--ILVCNAGIT---------SDTLAIRMKDQDFDKVIDINLKA 118

Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
              + +  +  M++++ G I+NI S   IV I  +P  + Y A+KA +   ++SL  E  
Sbjct: 119 NFILNREAIKKMIQKRYGRIINISS---IVGIAGNPGQANYCASKAGLIGMTKSLSYEVA 175

Query: 228 KSGIDVQC 235
             GI V  
Sbjct: 176 TRGITVNA 183

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =   99 bits (250), Expect = 2e-25
 Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 29/190 (15%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           ALVTG T GIG++ A      G  + L G   DKLK+++  +        +     + S 
Sbjct: 30  ALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKD-----VFVFSANLSD 84

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
              + +  E  +  +EG+D  +L+NN GI+    R     D + ++       +++ VN+
Sbjct: 85  RKSIKQLAEVAEREMEGID--ILVNNAGIT----R-----DGLFVRMQDQDWDDVLAVNL 133

Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYVE 225
              + +T+ ++  M++R+ G I+NI S   IV +  +P  + Y A KA +  FS++L  E
Sbjct: 134 TAASTLTRELIHSMMRRRYGRIINITS---IVGVVGNPGQTNYCAAKAGLIGFSKALAQE 190

Query: 226 YRKSGIDVQC 235
                I V C
Sbjct: 191 IASRNITVNC 200

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  100 bits (251), Expect = 2e-25
 Identities = 41/194 (21%), Positives = 74/194 (38%), Gaps = 30/194 (15%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKS------- 108
             ++G + GIG + A ++A  G N+ LV ++ +    +  +I    A  +I+        
Sbjct: 12  MFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYT--AAKEIEEAGGQALP 69

Query: 109 VVVD--FSGDLDEGVERIKEAIEGLDVGVLINNVGI-------SYPYARFFHEVDQVLLK 159
           +V D      +   V +  E   G+D+   +NN            P  RF    D +   
Sbjct: 70  IVGDIRDGDAVAAAVAKTVEQFGGIDI--CVNNASAINLGSIEEVPLKRF----DLM--- 120

Query: 160 NLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFS 219
               + V GT  V+Q+ +P M  R    I+ +     +  P     + Y   K  +   +
Sbjct: 121 --NGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRL-EPKWLRPTPYMMAKYGMTLCA 177

Query: 220 RSLYVEYRKSGIDV 233
             +  E R +GI  
Sbjct: 178 LGIAEELRDAGIAS 191

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =   99 bits (250), Expect = 2e-25
 Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 16/183 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQ-IKSVVVDF 113
           A VTG + GIG + A +LA  G  + L      ++ + V   I+    +   I++   D 
Sbjct: 34  AFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRD- 92

Query: 114 SGDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARF-FHEVDQVLLKNLIKVNVEGTT 170
           +  +++ +    EA+ GLD+  L+N+ GI +  P       + D+V     + VN     
Sbjct: 93  AEAIEQAIRETVEALGGLDI--LVNSAGIWHSAPLEETTVADFDEV-----MAVNFRAPF 145

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
              ++    +     G I+ IGS  A ++P  P  S+Y+A+KA +   ++ L  +    G
Sbjct: 146 VAIRSASRHL--GDGGRIITIGSNLAELVPW-PGISLYSASKAALAGLTKGLARDLGPRG 202

Query: 231 IDV 233
           I V
Sbjct: 203 ITV 205

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 99.6 bits (249), Expect = 3e-25
 Identities = 44/195 (22%), Positives = 82/195 (42%), Gaps = 27/195 (13%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            +VTG   GIG +F   +A  G N+ ++ R+     +V++ +  ++   + K+   D S 
Sbjct: 17  IIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSN 75

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGIS-------YPYARFFHEVDQVLLKNLIKVNV 166
              + + +++I   +  +    LI N G+S         +  F      V       VNV
Sbjct: 76  TDIVTKTIQQIDADLGPIS--GLIANAGVSVVKPATELTHEDF----AFV-----YDVNV 124

Query: 167 EGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLY-----SVYAATKAYIDQFSR 220
            G     +AV    L++++ G+IV   S ++ +I    L        Y ++KA      +
Sbjct: 125 FGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVK 184

Query: 221 SLYVEYRKSGIDVQC 235
            L  E+  +GI V  
Sbjct: 185 GLAAEWASAGIRVNA 199

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 99.6 bits (249), Expect = 3e-25
 Identities = 54/184 (29%), Positives = 79/184 (42%), Gaps = 12/184 (6%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVG--RNPDKLKDVSDSIQAKYAKTQ-IKSVVVD 112
            LVTG + GIG +     A+ G   V V    N +    V  +I     +   I   V +
Sbjct: 29  VLVTGGSRGIGAAVCRLAARQGWR-VGVNYAANREAADAVVAAITESGGEAVAIPGDVGN 87

Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
            + D+      +      LD   L+NN GI     R   E+    ++ +++VNV G+   
Sbjct: 88  AA-DIAAMFSAVDRQFGRLDG--LVNNAGIVDYPQRV-DEMSVERIERMLRVNVTGSILC 143

Query: 173 TQAVLPGMLKRKK---GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
               +  M +      GAIVN+ S AA ++ S   Y  YAA+KA ID F+  L  E    
Sbjct: 144 AAEAVRRMSRLYSGQGGAIVNVSSMAA-ILGSATQYVDYAASKAAIDTFTIGLAREVAAE 202

Query: 230 GIDV 233
           GI V
Sbjct: 203 GIRV 206

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 99.2 bits (248), Expect = 3e-25
 Identities = 35/184 (19%), Positives = 65/184 (35%), Gaps = 19/184 (10%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A+VT      G   A +L++ G  +     +  +  ++       +A+T  +   +    
Sbjct: 4   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL-----EAFAETYPQLKPMSEQ- 57

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGI---SYPYARFFHEV-DQVLLKNLIKVNVEGTTK 171
           +  E +E +  A   +DV  L++N        P  ++  E          ++        
Sbjct: 58  EPAELIEAVTSAYGQVDV--LVSNDIFAPEFQPIDKYAVEDYRGA-----VEALQIRPFA 110

Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           +  AV   M KRK G I+ I S            S Y + +A     + +L  E  +  I
Sbjct: 111 LVNAVASQMKKRKSGHIIFITSATPFG--PWKELSTYTSARAGACTLANALSKELGEYNI 168

Query: 232 DVQC 235
            V  
Sbjct: 169 PVFA 172

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 99.5 bits (249), Expect = 3e-25
 Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 26/190 (13%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           A+VTG + GIG++ A +LA+ G  ++         + +  + +   A  + +  V++ + 
Sbjct: 31  AIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQ--AGLEGRGAVLNVND 88

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
              +D  VE   +    L+  VL+NN GI+    +     DQ+ ++        +I  N+
Sbjct: 89  ATAVDALVESTLKEFGALN--VLVNNAGIT----Q-----DQLAMRMKDDEWDAVIDTNL 137

Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYVE 225
           +   ++++AVL  M+K + G IVNI S   +V    +P    YAA KA +   +R+L  E
Sbjct: 138 KAVFRLSRAVLRPMMKARGGRIVNITS---VVGSAGNPGQVNYAAAKAGVAGMTRALARE 194

Query: 226 YRKSGIDVQC 235
               GI V C
Sbjct: 195 IGSRGITVNC 204

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 98.8 bits (247), Expect = 4e-25
 Identities = 42/192 (21%), Positives = 70/192 (36%), Gaps = 22/192 (11%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
            L+TG + GIG + A   A+ G  + L GR  P  + +   S++A            D +
Sbjct: 10  VLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRA--DGGDAAFFAADLA 67

Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFF----HEVDQVLLKNLIKVNVEG 168
                 + V+       G+D  VLINN G                D V     +  N+  
Sbjct: 68  TSEACQQLVDEFVAKFGGID--VLINNAGGLVGRKPLPEIDDTFYDAV-----MDANIRS 120

Query: 169 TTKVTQAVLPGMLKR-----KKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
               T+  LP +        +  A+++ GS A       P   +Y A KA++    ++  
Sbjct: 121 VVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGG-PGAGLYGAAKAFLHNVHKNWV 179

Query: 224 VEYRKSGIDVQC 235
             + K G+    
Sbjct: 180 DFHTKDGVRFNI 191

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score =  100 bits (250), Expect = 5e-25
 Identities = 44/187 (23%), Positives = 77/187 (41%), Gaps = 20/187 (10%)

Query: 56  ALVTGPTDGIGKSFAFQLAKT---GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
            L+TG + GIG   A +LA        +    R+      + ++ +A          +  
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ- 63

Query: 113 FSGDLD----EGVER-IKEAIEG-LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNV 166
               LD    + V    +   EG +DV  L+ N G+          + +  + +++ VNV
Sbjct: 64  ----LDVRDSKSVAAARERVTEGRVDV--LVCNAGLGLLGP--LEALGEDAVASVLDVNV 115

Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
            GT ++ QA LP M +R  G ++  GS   ++    P   VY A+K  ++    SL V  
Sbjct: 116 VGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM--GLPFNDVYCASKFALEGLCESLAVLL 173

Query: 227 RKSGIDV 233
              G+ +
Sbjct: 174 LPFGVHL 180

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 98.3 bits (246), Expect = 5e-25
 Identities = 45/189 (23%), Positives = 80/189 (42%), Gaps = 30/189 (15%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            L+TG   GIG++     AK G  LV        L++ ++++ A         VV+D + 
Sbjct: 8   VLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGA-------HPVVMDVAD 60

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
              ++ G       +  LD   +++  GI+    R     D    K        +++VN+
Sbjct: 61  PASVERGFAEALAHLGRLD--GVVHYAGIT----R-----DNFHWKMPLEDWELVLRVNL 109

Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
            G+  V +A    M ++  G+IV   S    V   +   + YAA+ A +   +R+L +E 
Sbjct: 110 TGSFLVAKAASEAMREKNPGSIVLTAS---RVYLGNLGQANYAASMAGVVGLTRTLALEL 166

Query: 227 RKSGIDVQC 235
            + GI V  
Sbjct: 167 GRWGIRVNT 175

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 99.2 bits (248), Expect = 5e-25
 Identities = 47/184 (25%), Positives = 77/184 (41%), Gaps = 12/184 (6%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A++TG   GIG++ A    + G  +V+     D  + V ++I +    + +   V     
Sbjct: 19  AIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTK--- 75

Query: 116 DLDEGVER-IKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
             DE V   +   I     LD+  +  NVG+         E      K ++ +NV G   
Sbjct: 76  --DEDVRNLVDTTIAKHGKLDI--MFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFL 131

Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           V +     M+  KKG+IV   S ++     + +  VY ATK  +   + SL  E  + GI
Sbjct: 132 VAKHAARVMIPAKKGSIVFTASISSFT-AGEGVSHVYTATKHAVLGLTTSLCTELGEYGI 190

Query: 232 DVQC 235
            V C
Sbjct: 191 RVNC 194

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 98.4 bits (246), Expect = 7e-25
 Identities = 35/182 (19%), Positives = 69/182 (37%), Gaps = 13/182 (7%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVL---VGRNPDKLKDVSDSIQAKYAKTQ-IKSVVV 111
            ++ G    +G   A   A   +NLVL     ++ D    + D ++ + AK    +S + 
Sbjct: 14  IVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLS 73

Query: 112 DFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
           +   ++ +  +  ++    +D+   IN VG      +   E  +     +  +N +    
Sbjct: 74  NEE-EVAKLFDFAEKEFGKVDI--AINTVGKVLK--KPIVETSEAEFDAMDTINNKVAYF 128

Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
             +     M     G I+ I +           YS YA  KA ++ ++R+   E  K  I
Sbjct: 129 FIKQAAKHM--NPNGHIITIATSLLAA--YTGFYSTYAGNKAPVEHYTRAASKELMKQQI 184

Query: 232 DV 233
            V
Sbjct: 185 SV 186

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 98.0 bits (245), Expect = 8e-25
 Identities = 38/181 (20%), Positives = 66/181 (36%), Gaps = 12/181 (6%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
            +V G    IG++ A + A+ G N+VL      +        I+         ++  D +
Sbjct: 11  IVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSA--LAIKADLT 68

Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
              +++  +    +    +    L++  G          E+D+     ++ VN+      
Sbjct: 69  NAAEVEAAISAAADKFGEIH--GLVHVAGGLIARKT-IAEMDEAFWHQVLDVNLTSLFLT 125

Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
            +  LP M   K GAIV   S A       P    YA +K  +  F+R L  E     I 
Sbjct: 126 AKTALPKM--AKGGAIVTFSSQAGRDGGG-PGALAYATSKGAVMTFTRGLAKEV-GPKIR 181

Query: 233 V 233
           V
Sbjct: 182 V 182

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 97.6 bits (244), Expect = 1e-24
 Identities = 45/180 (25%), Positives = 71/180 (39%), Gaps = 13/180 (7%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI--QAKYAKTQIKSVVVDF 113
            ++TG   G+G   A Q    G  +VL     ++    +  +   A+Y        V   
Sbjct: 8   VIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLD----VTIE 63

Query: 114 SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
             D    V   +E    +D   L+NN GIS     F         + ++++N+ G     
Sbjct: 64  E-DWQRVVAYAREEFGSVDG--LVNNAGISTG--MFLETESVERFRKVVEINLTGVFIGM 118

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           + V+P M     G+IVNI S A ++     L S Y A+K  +   S+   VE     I V
Sbjct: 119 KTVIPAMKDAGGGSIVNISSAAGLM--GLALTSSYGASKWGVRGLSKLAAVELGTDRIRV 176

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 97.6 bits (244), Expect = 1e-24
 Identities = 50/190 (26%), Positives = 98/190 (51%), Gaps = 29/190 (15%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           ALVTG + GIGK+ A  LA+ G  ++    +    + +SD +         K + ++ + 
Sbjct: 12  ALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDN-----GKGMALNVTN 66

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
              ++  ++ I +   G+D  +L+NN GI+    R     D +L++       ++++ N+
Sbjct: 67  PESIEAVLKAITDEFGGVD--ILVNNAGIT----R-----DNLLMRMKEEEWSDIMETNL 115

Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYVE 225
               ++++AVL GM+K+++G I+N+GS   +V    +   + YAA KA +  F++S+  E
Sbjct: 116 TSIFRLSKAVLRGMMKKRQGRIINVGS---VVGTMGNAGQANYAAAKAGVIGFTKSMARE 172

Query: 226 YRKSGIDVQC 235
               G+ V  
Sbjct: 173 VASRGVTVNT 182

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 98.0 bits (245), Expect = 1e-24
 Identities = 45/187 (24%), Positives = 76/187 (40%), Gaps = 17/187 (9%)

Query: 56  ALVTGPTD-GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
            LVT     GIG + A +    G ++V+   +  +L +  D +       ++++VV D +
Sbjct: 25  VLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADL-GLGRVEAVVCDVT 83

Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARFFHEV-DQVLLKNLIKVNVEGT 169
               +D  + +  E    LD  VL+NN G+    P      E  D+V     + V +   
Sbjct: 84  STEAVDALITQTVEKAGRLD--VLVNNAGLGGQTPVVDMTDEEWDRV-----LNVTLTSV 136

Query: 170 TKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
            + T+A L         G IVN  S       +    S YAA KA +   +R   +E  +
Sbjct: 137 MRATRAALRYFRGVDHGGVIVNNASVLGWR--AQHSQSHYAAAKAGVMALTRCSAIEAVE 194

Query: 229 SGIDVQC 235
            G+ +  
Sbjct: 195 FGVRINA 201

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 97.6 bits (244), Expect = 1e-24
 Identities = 51/190 (26%), Positives = 76/190 (40%), Gaps = 28/190 (14%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           ALVTG   GIGK+ A +LA  G  +++   N +  K  + SI  K      +++  D S 
Sbjct: 9   ALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKK-----ARAIAADISD 63

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
            G +      I+    G+D  +L+NN  I                         +I VN+
Sbjct: 64  PGSVKALFAEIQALTGGID--ILVNNASIV----P-----FVAWDDVDLDHWRKIIDVNL 112

Query: 167 EGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
            GT  VT+A    M    K G +++I S         P  + Y A K  +  F+R+L  E
Sbjct: 113 TGTFIVTRAGTDQMRAAGKAGRVISIASNTFFA--GTPNMAAYVAAKGGVIGFTRALATE 170

Query: 226 YRKSGIDVQC 235
             K  I    
Sbjct: 171 LGKYNITANA 180

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 98.1 bits (245), Expect = 1e-24
 Identities = 38/176 (21%), Positives = 69/176 (39%), Gaps = 15/176 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           AL+TG   G+G++   +    G  + ++ ++ ++L+++  +            VV D   
Sbjct: 8   ALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGN-----AVGVVGDVRS 62

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKN---LIKVNVEGTT 170
             D     ER   A   +D   LI N GI           +  +      +  VNV+G  
Sbjct: 63  LQDQKRAAERCLAAFGKID--TLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYI 120

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
              +A LP ++   +G++V   S A      +    +Y ATK  +    R +  E 
Sbjct: 121 HAVKACLPALVSS-RGSVVFTISNAGFY--PNGGGPLYTATKHAVVGLVRQMAFEL 173

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 97.6 bits (244), Expect = 2e-24
 Identities = 52/189 (27%), Positives = 80/189 (42%), Gaps = 25/189 (13%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           A+VTG + GIG + A +LA  G  +V+         ++V+  I+A  A  +  +   D S
Sbjct: 30  AIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEA--AGGKALTAQADVS 87

Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISY--PYARF----FHEVDQVLLKNLIKVNV 166
               +       +EA  G+DV  L+NN GI      A      F  V        I VN+
Sbjct: 88  DPAAVRRLFATAEEAFGGVDV--LVNNAGIMPLTTIAETGDAVFDRV--------IAVNL 137

Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
           +GT    +     +  R  G I+N+ +    +    P Y +YAA KA ++  +  L  E 
Sbjct: 138 KGTFNTLREAAQRL--RVGGRIINMSTSQVGL--LHPSYGIYAAAKAGVEAMTHVLSKEL 193

Query: 227 RKSGIDVQC 235
           R   I V  
Sbjct: 194 RGRDITVNA 202

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 96.9 bits (242), Expect = 2e-24
 Identities = 34/179 (18%), Positives = 64/179 (35%), Gaps = 9/179 (5%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK-DVSDSIQAKYAKTQIKSVVVDFS 114
             +TG   GIG +    LA+ G  ++ + R    ++ D+S     + A   + +V+    
Sbjct: 4   IAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETA---VAAVLDRCG 60

Query: 115 GDLDEGVER--IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
           G LD  V    +        + V +N  G+S         + +      + V     T+ 
Sbjct: 61  GVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQP 120

Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
             A LP +     G        A     +   +  YA +K  +   +R   V++   G+
Sbjct: 121 GAAELPMVEAMLAGDEARAIELAEQQGQT---HLAYAGSKYAVTCLARRNVVDWAGRGV 176

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 96.8 bits (242), Expect = 2e-24
 Identities = 37/180 (20%), Positives = 72/180 (40%), Gaps = 23/180 (12%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            LVTG + GIGK+    L +   + V+              IQ  ++   +K +  D + 
Sbjct: 7   YLVTGGSKGIGKAVVELLLQNKNHTVINID-----------IQQSFSAENLKFIKADLT- 54

Query: 116 DLDEGVERIKEAIE--GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              + +  + + I+    D   +  N GI         ++D   +K ++ +NV  +    
Sbjct: 55  KQQD-ITNVLDIIKNVSFD--GIFLNAGILIK--GSIFDIDIESIKKVLDLNVWSSIYFI 109

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           + +   +  +   +IV  GS    +  + P    Y  +K  I Q ++SL ++  K  I V
Sbjct: 110 KGLENNL--KVGASIVFNGSDQCFI--AKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRV 165

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 96.8 bits (242), Expect = 2e-24
 Identities = 41/181 (22%), Positives = 78/181 (43%), Gaps = 8/181 (4%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A++TG T GIG + A +  + G  +++ GR+ D  +  + S+         +    D   
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSD-ED 67

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
              +  +  ++A   +    L+NN GI+    +   E      + L+ VN++G    T+ 
Sbjct: 68  GWTKLFDATEKAFGPVS--TLVNNAGIAVN--KSVEETTTAEWRKLLAVNLDGVFFGTRL 123

Query: 176 VLPGMLKRKKG-AIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQ 234
            +  M  +  G +I+N+ S    V   DP    Y A+K  +   S+S  ++      DV+
Sbjct: 124 GIQRMKNKGLGASIINMSSIEGFV--GDPSLGAYNASKGAVRIMSKSAALDCALKDYDVR 181

Query: 235 C 235
            
Sbjct: 182 V 182

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 96.9 bits (242), Expect = 3e-24
 Identities = 37/178 (20%), Positives = 73/178 (41%), Gaps = 31/178 (17%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK-------DVSDSIQAKYAKTQIKS 108
            +VTG + GIG++ A +    G  ++ +  +            DV++  Q K +   I  
Sbjct: 11  VIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYDHIECDVTNPDQVKAS---IDH 67

Query: 109 VVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
           +  ++ G +                 VL+NN GI          +     + +I VN+ G
Sbjct: 68  IFKEY-GSIS----------------VLVNNAGIESYGK--IESMSMGEWRRIIDVNLFG 108

Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
               ++  +P M++ +  +IVNI S  A +       S Y  +K  +   ++S+ ++Y
Sbjct: 109 YYYASKFAIPYMIRSRDPSIVNISSVQASI--ITKNASAYVTSKHAVIGLTKSIALDY 164

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 96.4 bits (241), Expect = 3e-24
 Identities = 58/190 (30%), Positives = 98/190 (51%), Gaps = 25/190 (13%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           +LVTG T GIG++ A +LA  G  +++ G + ++ K V++ I  KY   +   V ++   
Sbjct: 10  SLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYG-VKAHGVEMNLLS 68

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
              +++  E I   ++G+D+  L+NN GI+    R     D++ L+        ++KVN+
Sbjct: 69  EESINKAFEEIYNLVDGIDI--LVNNAGIT----R-----DKLFLRMSLLDWEEVLKVNL 117

Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYVE 225
            GT  VTQ  L  M+K++ G IVNI S   +V    +     Y+ TKA +  F++SL  E
Sbjct: 118 TGTFLVTQNSLRKMIKQRWGRIVNISS---VVGFTGNVGQVNYSTTKAGLIGFTKSLAKE 174

Query: 226 YRKSGIDVQC 235
                + V  
Sbjct: 175 LAPRNVLVNA 184

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 96.9 bits (242), Expect = 4e-24
 Identities = 37/180 (20%), Positives = 76/180 (42%), Gaps = 10/180 (5%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQ-IKSVVVDF 113
           ALVTG   GIG+  A +L + G  +++    + +  ++V  +I+   +    +K+ V   
Sbjct: 32  ALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVV 91

Query: 114 SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
             D+    E   +    LD+  + +N G+   +     +V       +  +N  G   V 
Sbjct: 92  -EDIVRMFEEAVKIFGKLDI--VCSNSGV-VSFGHV-KDVTPEEFDRVFTINTRGQFFVA 146

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           +     +     G ++ +GS         P ++VY+ +K  I+ F+R + ++     I V
Sbjct: 147 REAYKHL--EIGGRLILMGSITGQAKAV-PKHAVYSGSKGAIETFARCMAIDMADKKITV 203

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 96.1 bits (240), Expect = 5e-24
 Identities = 41/195 (21%), Positives = 66/195 (33%), Gaps = 46/195 (23%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK--------DVSDSIQAKYAKTQIK 107
             VTG   GIG + A    + G  +    +   + +        DV+D+ Q         
Sbjct: 10  VWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQV-------- 61

Query: 108 SVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------N 160
                      +  +R+    E LD   L+N  GI                +        
Sbjct: 62  ----------AQVCQRLLAETERLDA--LVNAAGIL---------RMGATDQLSKEDWQQ 100

Query: 161 LIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSR 220
              VNV G   + Q  +    +++ GAIV + S AA         S Y A+KA +   + 
Sbjct: 101 TFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHT--PRIGMSAYGASKAALKSLAL 158

Query: 221 SLYVEYRKSGIDVQC 235
           S+ +E   SG+    
Sbjct: 159 SVGLELAGSGVRCNV 173

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 95.7 bits (239), Expect = 6e-24
 Identities = 45/182 (24%), Positives = 75/182 (41%), Gaps = 17/182 (9%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI--QAKYAKTQIKSVVVDF 113
           ALV+G   G+G S    +   G  +V      ++ K ++  +   A+Y       V +D 
Sbjct: 10  ALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARY-------VHLDV 62

Query: 114 S--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
           +        V+    A  GL V  L+NN GI         +      + ++ VN+ G   
Sbjct: 63  TQPAQWKAAVDTAVTAFGGLHV--LVNNAGILNI--GTIEDYALTEWQRILDVNLTGVFL 118

Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
             +AV+  M +  +G+I+NI S   +          Y ATK  +   ++S  +E   SGI
Sbjct: 119 GIRAVVKPMKEAGRGSIINISSIEGLA--GTVACHGYTATKFAVRGLTKSTALELGPSGI 176

Query: 232 DV 233
            V
Sbjct: 177 RV 178

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 97.1 bits (242), Expect = 6e-24
 Identities = 37/215 (17%), Positives = 64/215 (29%), Gaps = 41/215 (19%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKY------------- 101
           ALVTG    +G+S A  L   G  + L   R+  +   +S ++ A+              
Sbjct: 49  ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 108

Query: 102 -AKTQIKSVVVDFSGDLDEGVER-IKEAIE---GLDVGVLINNVGISYP----------- 145
            A   +          L       +          D  VL+NN    YP           
Sbjct: 109 VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCD--VLVNNASSFYPTPLLRNDEDGH 166

Query: 146 -YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGML------KRKKGAIVNIGSGAAIV 198
                  E  +    +L   N      + +A    +       +    +I+N+       
Sbjct: 167 EPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQ 226

Query: 199 IPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
                 Y++Y   K  ++  +RS  +E     I V
Sbjct: 227 --PLLGYTIYTMAKGALEGLTRSAALELAPLQIRV 259

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 96.1 bits (240), Expect = 7e-24
 Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 10/180 (5%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAK-TQIKSVVVDF 113
           AL TG   GIG+  A +L + G ++V+  G +    ++V   ++   A+   I++ +   
Sbjct: 24  ALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKP 83

Query: 114 SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
           S ++    ++      GLD   +++N G+   +     EV Q L   +  +N  G   V 
Sbjct: 84  S-EVVALFDKAVSHFGGLDF--VMSNSGM-EVWCDE-LEVTQELFDKVFNLNTRGQFFVA 138

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           Q  L     R+ G I+   S AA++    P +++YA +KA ++ F R+  V+    G+ V
Sbjct: 139 QQGLKHC--RRGGRIILTSSIAAVMTGI-PNHALYAGSKAAVEGFCRAFAVDCGAKGVTV 195

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 95.7 bits (239), Expect = 9e-24
 Identities = 38/180 (21%), Positives = 72/180 (40%), Gaps = 10/180 (5%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAK-TQIKSVVVDF 113
           ALVTG   GIG + A  L + G  +V+    +    + V   I+A  +    IK+ +   
Sbjct: 21  ALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQ- 79

Query: 114 SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
             ++ +  ++       LD+   ++N G+   +     +V +     +  +N  G   V 
Sbjct: 80  VPEIVKLFDQAVAHFGHLDI--AVSNSGV-VSFGHL-KDVTEEEFDRVFSLNTRGQFFVA 135

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           +     +   + G IV   S  +      P +S+Y+ +K  +D F R    +     I V
Sbjct: 136 REAYRHL--TEGGRIVLTSSNTSKDFSV-PKHSLYSGSKGAVDSFVRIFSKDCGDKKITV 192

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 95.8 bits (239), Expect = 9e-24
 Identities = 36/198 (18%), Positives = 68/198 (34%), Gaps = 24/198 (12%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIK-----SV 109
           A++TG    IG S A +L + G  +V+  R +    + +   + A  A + +      S+
Sbjct: 14  AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL 73

Query: 110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKN--------- 160
                   ++ ++    A    DV  L+NN    YP      +                 
Sbjct: 74  SSSLLDCCEDIIDCSFRAFGRCDV--LVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAE 131

Query: 161 LIKVNVEGTTKVTQAVLP-----GMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYI 215
           L   N      + +A        G  + +  ++VN+      +    P + VY   K  +
Sbjct: 132 LFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDL--PLPGFCVYTMAKHAL 189

Query: 216 DQFSRSLYVEYRKSGIDV 233
              +R+  +E     I V
Sbjct: 190 GGLTRAAALELAPRHIRV 207

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 94.9 bits (237), Expect = 1e-23
 Identities = 53/191 (27%), Positives = 98/191 (51%), Gaps = 26/191 (13%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKY--AKTQIKSVVVD 112
           AL+TG + GIG++ A +LA+ G  L +  G+N +K ++V++  + +       + + +++
Sbjct: 4   ALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLE 63

Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVN 165
                   V +  E + GLD   L+NN GI+    R     D +L++        +++ N
Sbjct: 64  AE-AATALVHQAAEVLGGLDT--LVNNAGIT----R-----DTLLVRMKDEDWEAVLEAN 111

Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYV 224
           +    + T+  +  M+K + G IVNI S   +V I  +P  + Y A+KA +  F+R++  
Sbjct: 112 LSAVFRTTREAVKLMMKARFGRIVNITS---VVGILGNPGQANYVASKAGLIGFTRAVAK 168

Query: 225 EYRKSGIDVQC 235
           EY + GI V  
Sbjct: 169 EYAQRGITVNA 179

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 94.9 bits (237), Expect = 1e-23
 Identities = 42/184 (22%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI--QAKYAKTQIKSVVVDF 113
           ALVTG   G+G      L   G  +     N    + ++  +  ++ +       V  D 
Sbjct: 9   ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMF-------VRHDV 61

Query: 114 S--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
           S   D    +  ++  +  L+  VL+NN GI  P               L+K+N E    
Sbjct: 62  SSEADWTLVMAAVQRRLGTLN--VLVNNAGILLP--GDMETGRLEDFSRLLKINTESVFI 117

Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
             Q  +  M K   G+I+N+ S ++ +      Y+ Y+A+KA +   +R+  +  RK G 
Sbjct: 118 GCQQGIAAM-KETGGSIINMASVSSWL--PIEQYAGYSASKAAVSALTRAAALSCRKQGY 174

Query: 232 DVQC 235
            ++ 
Sbjct: 175 AIRV 178

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 95.3 bits (238), Expect = 1e-23
 Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 20/190 (10%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQ-IKSVVVDF 113
           A+VTG   GIG   A  LA +G ++ + G  + + +  V   +    A+   +++ + D 
Sbjct: 32  AIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADL 91

Query: 114 SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEV-----DQVLLKNLIKVNVEG 168
           S      V+ +      +D   L+NN GI+      F ++     D +     + VN+ G
Sbjct: 92  S-SHQATVDAVVAEFGRID--CLVNNAGIASIVRDDFLDLKPENFDTI-----VGVNLRG 143

Query: 169 TTKVTQAVLPGMLK---RKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
           T   TQAVL  ML    R   +I+NI S +A++  + P    Y  +KA +  FS+ L + 
Sbjct: 144 TVFFTQAVLKAMLASDARASRSIINITSVSAVM--TSPERLDYCMSKAGLAAFSQGLALR 201

Query: 226 YRKSGIDVQC 235
             ++GI V  
Sbjct: 202 LAETGIAVFE 211

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 95.5 bits (238), Expect = 2e-23
 Identities = 37/215 (17%), Positives = 64/215 (29%), Gaps = 41/215 (19%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKY------------- 101
           ALVTG    +G+S A  L   G  + L   R+  +   +S ++ A+              
Sbjct: 12  ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 71

Query: 102 -AKTQIKSVVVDFSGDLDEGVER-IKEAIE---GLDVGVLINNVGISYP----------- 145
            A   +          L       +          DV  L+NN    YP           
Sbjct: 72  VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDV--LVNNASSFYPTPLLRNDEDGH 129

Query: 146 -YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGML------KRKKGAIVNIGSGAAIV 198
                  E  +    +L   N      + +A    +       +    +I+N+       
Sbjct: 130 EPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQ 189

Query: 199 IPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
                 Y++Y   K  ++  +RS  +E     I V
Sbjct: 190 PL--LGYTIYTMAKGALEGLTRSAALELAPLQIRV 222

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 93.5 bits (233), Expect = 3e-23
 Identities = 23/182 (12%), Positives = 53/182 (29%), Gaps = 17/182 (9%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            LV G    +G             +  +    ++    S  ++          +   F+ 
Sbjct: 10  VLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVK----------MTDSFTE 59

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
             D+    + + +    V  ++   G          +        + K ++  +T  +  
Sbjct: 60  QADQVTAEVGKLLGDQKVDAILCVAGGWAGGNA-KSKSLFKNCDLMWKQSIWTSTISSHL 118

Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR--KSGIDV 233
               +  ++ G +   G+ AA+     P    Y   K  + Q  +SL  +     SG   
Sbjct: 119 ATKHL--KEGGLLTLAGAKAALD--GTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAA 174

Query: 234 QC 235
             
Sbjct: 175 IA 176

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 93.8 bits (234), Expect = 4e-23
 Identities = 42/206 (20%), Positives = 77/206 (37%), Gaps = 49/206 (23%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQI-----KSVV 110
           ALVTG   GIG++ + +LA  G  +     +    ++    +    +K         +  
Sbjct: 10  ALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQ 69

Query: 111 VDFSGDLDEGVERIKEAIE--GLDVGVLINNVGISYPYARFFHEVDQVLLK-------NL 161
            D S +       +++          V+++  GI     +     D+ LL         +
Sbjct: 70  ADVS-EARAARCLLEQVQACFSRPPSVVVSCAGI----TQ-----DEFLLHMSEDDWDKV 119

Query: 162 IKVNVEGTTKVTQAVLPGMLK-RKKGAIVNIGSGAAIVIPSDPLYSV-----------YA 209
           I VN++GT  VTQA    ++    +G+I+NI S             +           YA
Sbjct: 120 IAVNLKGTFLVTQAAAQALVSNGCRGSIINISS-------------IVGKVGNVGQTNYA 166

Query: 210 ATKAYIDQFSRSLYVEYRKSGIDVQC 235
           A+KA +   +++   E  + GI    
Sbjct: 167 ASKAGVIGLTQTAARELGRHGIRCNS 192

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 93.3 bits (233), Expect = 4e-23
 Identities = 56/191 (29%), Positives = 93/191 (48%), Gaps = 27/191 (14%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           A+VTG + G+GK+ A++L   G N+VL G      L   ++  +A  A   +     D  
Sbjct: 8   AIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKA--AGINVVVAKGDVK 65

Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVN 165
              D++  V+   +A   +D+  L+NN GI+    R     D ++LK       +++  N
Sbjct: 66  NPEDVENMVKTAMDAFGRIDI--LVNNAGIT----R-----DTLMLKMSEKDWDDVLNTN 114

Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYV 224
           ++     T+AV   MLK+K G I+NI S   I  I  +   + YAA+KA +  F++S+  
Sbjct: 115 LKSAYLCTKAVSKIMLKQKSGKIINITS---IAGIIGNAGQANYAASKAGLIGFTKSIAK 171

Query: 225 EYRKSGIDVQC 235
           E+   GI    
Sbjct: 172 EFAAKGIYCNA 182

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 92.8 bits (231), Expect = 6e-23
 Identities = 24/182 (13%), Positives = 57/182 (31%), Gaps = 17/182 (9%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            +V G    +G +      K G  ++ +  + +   D +  +              +++ 
Sbjct: 6   VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDG----------NKNWTE 55

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
                +E+   +++G  V  +    G     +    +        +IK +V  +    + 
Sbjct: 56  QEQSILEQTASSLQGSQVDGVFCVAGGWAGGSA-SSKDFVKNADLMIKQSVWSSAIAAKL 114

Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR--KSGIDV 233
               +  +  G +   G+ AA+     P    Y   KA +   + SL  +         V
Sbjct: 115 ATTHL--KPGGLLQLTGAAAAMG--PTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAV 170

Query: 234 QC 235
             
Sbjct: 171 LT 172

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 92.5 bits (231), Expect = 7e-23
 Identities = 54/191 (28%), Positives = 93/191 (48%), Gaps = 27/191 (14%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           ALVTG + GIG+S A QLA+ G N+ +    + +K + V + I+A        ++  + +
Sbjct: 7   ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKA--KGVDSFAIQANVA 64

Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVN 165
              ++   ++ +      LDV  L+NN GI+    R     D +L++       ++I  N
Sbjct: 65  DADEVKAMIKEVVSQFGSLDV--LVNNAGIT----R-----DNLLMRMKEQEWDDVIDTN 113

Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYV 224
           ++G     Q   P ML+++ GAI+N+ S   +V    +P  + Y ATKA +   ++S   
Sbjct: 114 LKGVFNCIQKATPQMLRQRSGAIINLSS---VVGAVGNPGQANYVATKAGVIGLTKSAAR 170

Query: 225 EYRKSGIDVQC 235
           E    GI V  
Sbjct: 171 ELASRGITVNA 181

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 92.5 bits (231), Expect = 7e-23
 Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 27/191 (14%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           ALVTG + GIG++ A  LAK G N+V+    N  K  +V D I+     +   +V  D +
Sbjct: 7   ALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKK--LGSDAIAVRADVA 64

Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVN 165
              D+   V++  +    +D+  L+NN G++    +     D +L++        +I  N
Sbjct: 65  NAEDVTNMVKQTVDVFGQVDI--LVNNAGVT----K-----DNLLMRMKEEEWDTVINTN 113

Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYV 224
           ++G    T+AV   M++++ G IVNI S   +V +  +P  + Y A KA +   +++   
Sbjct: 114 LKGVFLCTKAVSRFMMRQRHGRIVNIAS---VVGVTGNPGQANYVAAKAGVIGLTKTSAK 170

Query: 225 EYRKSGIDVQC 235
           E     I V  
Sbjct: 171 ELASRNITVNA 181

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 93.5 bits (233), Expect = 9e-23
 Identities = 38/200 (19%), Positives = 69/200 (34%), Gaps = 24/200 (12%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIK-----SV 109
           A+VTG    IG++ A +L +TG  +V+    + +    ++D +  + + T +      + 
Sbjct: 26  AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTN 85

Query: 110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKN--------L 161
                   +E +     A    D  VL+NN    YP      + +              L
Sbjct: 86  SNVLPASCEEIINSCFRAFGRCD--VLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAEL 143

Query: 162 IKVNVEGTTKVTQAVLPGM------LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYI 215
           I  N      +T +                 +IVN+        P    +S+Y   K  +
Sbjct: 144 IGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMV-DQPC-MAFSLYNMGKHAL 201

Query: 216 DQFSRSLYVEYRKSGIDVQC 235
              ++S  +E    GI V  
Sbjct: 202 VGLTQSAALELAPYGIRVNG 221

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 92.6 bits (231), Expect = 1e-22
 Identities = 28/173 (16%), Positives = 58/173 (33%), Gaps = 16/173 (9%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            L+TG +  +G   A +L + G  +++  R           ++   A      +  DFS 
Sbjct: 30  ILITGASQRVGLHCALRLLEHGHRVIISYRTEH---ASVTELRQAGAVA----LYGDFSC 82

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              +   ++ +K     L    +++N            E D      +  V++     + 
Sbjct: 83  ETGIMAFIDLLKTQTSSLRA--VVHNASEWLA-ETPGEEADN--FTRMFSVHMLAPYLIN 137

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
               P +   +   IV+I             +  Y ATKA ++  + S    +
Sbjct: 138 LHCEPLLTASEVADIVHISDDVTRK--GSSKHIAYCATKAGLESLTLSFAARF 188

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 92.6 bits (231), Expect = 1e-22
 Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 47/201 (23%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           A VTG   G+G + + +L   G+ + +      D +       +   A    K+  VD +
Sbjct: 28  AFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERD--AGRDFKAYAVDVA 85

Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVN 165
                +   E++      +DV  LINN GI+    R     D   +K        +++ +
Sbjct: 86  DFESCERCAEKVLADFGKVDV--LINNAGIT----R-----DATFMKMTKGDWDAVMRTD 134

Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV-----------YAATKAY 214
           ++    VT+  + GM++R+ G IVNIG             SV           YA+ KA 
Sbjct: 135 LDAMFNVTKQFIAGMVERRFGRIVNIG-------------SVNGSRGAFGQANYASAKAG 181

Query: 215 IDQFSRSLYVEYRKSGIDVQC 235
           I  F+++L +E  K GI V  
Sbjct: 182 IHGFTKTLALETAKRGITVNT 202

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score = 92.2 bits (230), Expect = 1e-22
 Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 17/186 (9%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQ-IKSVVVDF 113
           ALVTG + GIG++ A +LA  G  + +  G   ++ ++    IQ+       I + +   
Sbjct: 10  ALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLES- 68

Query: 114 SGDLDEGVERIKEAIE------GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVE 167
              ++     +   ++        D+  LINN GI  P A    E  +     ++ VN +
Sbjct: 69  LHGVEALYSSLDNELQNRTGSTKFDI--LINNAGI-GPGAFI-EETTEQFFDRMVSVNAK 124

Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
               + Q  L  +  R    I+NI S A  +  S P +  Y+ TK  I+  + +L  +  
Sbjct: 125 APFFIIQQALSRL--RDNSRIINISSAATRI--SLPDFIAYSMTKGAINTMTFTLAKQLG 180

Query: 228 KSGIDV 233
             GI V
Sbjct: 181 ARGITV 186

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 92.2 bits (230), Expect = 1e-22
 Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 47/201 (23%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           A VTG   GIG S   +L K G  +V   G N  +     +  +A        +   +  
Sbjct: 16  AYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKA--LGFDFYASEGNVG 73

Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVN 165
                 +  +++K  +  +DV  L+NN GI+    R     D V  K        +I  N
Sbjct: 74  DWDSTKQAFDKVKAEVGEIDV--LVNNAGIT----R-----DVVFRKMTREDWQAVIDTN 122

Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV-----------YAATKAY 214
           +     VT+ V+ GM++R  G I+NI              SV           Y+  KA 
Sbjct: 123 LTSLFNVTKQVIDGMVERGWGRIINIS-------------SVNGQKGQFGQTNYSTAKAG 169

Query: 215 IDQFSRSLYVEYRKSGIDVQC 235
           I  F+ SL  E    G+ V  
Sbjct: 170 IHGFTMSLAQEVATKGVTVNT 190

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 92.6 bits (231), Expect = 1e-22
 Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 27/191 (14%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           ALVTG + GIG++ A +LA  G  + +    +     +V  +I A  A  +  +V  D S
Sbjct: 31  ALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAA--AGGEAFAVKADVS 88

Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVN 165
              +++     + E    LDV  L+NN GI     R     D +LL+       +++ +N
Sbjct: 89  QESEVEALFAAVIERWGRLDV--LVNNAGI----TR-----DTLLLRMKRDDWQSVLDLN 137

Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYV 224
           + G    ++A    MLK++ G I+NI S   +V    +P  + Y+A KA +   ++++  
Sbjct: 138 LGGVFLCSRAAAKIMLKQRSGRIINIAS---VVGEMGNPGQANYSAAKAGVIGLTKTVAK 194

Query: 225 EYRKSGIDVQC 235
           E    GI V  
Sbjct: 195 ELASRGITVNA 205

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 91.4 bits (228), Expect = 2e-22
 Identities = 55/191 (28%), Positives = 93/191 (48%), Gaps = 27/191 (14%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
            +VTG + GIGK+ A  L K G  +++   R+    ++VS  I+A     Q  +   D S
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEA--YGGQAITFGGDVS 61

Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVN 165
              D++  ++   +A   +DV  ++NN GI+    R     D +L++        +I +N
Sbjct: 62  KEADVEAMMKTAIDAWGTIDV--VVNNAGIT----R-----DTLLIRMKKSQWDEVIDLN 110

Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYV 224
           + G    TQA    M+K++KG I+NI S   +V +  +   + YAA KA +  FS++   
Sbjct: 111 LTGVFLCTQAATKIMMKKRKGRIINIAS---VVGLIGNIGQANYAAAKAGVIGFSKTAAR 167

Query: 225 EYRKSGIDVQC 235
           E     I+V  
Sbjct: 168 EGASRNINVNV 178

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 91.5 bits (228), Expect = 2e-22
 Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 21/190 (11%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           AL+T  T G+GK    +L   G ++ +    +   ++ + ++ +    + +++ V  D +
Sbjct: 10  ALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKD--VEERLQFVQADVT 67

Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVN 165
              DL + VE        +D   LINN G             + L+         +I+ N
Sbjct: 68  KKEDLHKIVEEAMSHFGKIDF--LINNAG--PYVFE-----RKKLVDYEEDEWNEMIQGN 118

Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
           +     + + V+P M K+  G I+N G   A   P     S +AA K  +   ++++  E
Sbjct: 119 LTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYE 178

Query: 226 YRKSGIDVQC 235
             + GI    
Sbjct: 179 EAEYGITANM 188

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 91.7 bits (228), Expect = 3e-22
 Identities = 45/195 (23%), Positives = 78/195 (40%), Gaps = 21/195 (10%)

Query: 56  ALVTGPTDGIGKSFAFQLAKT---GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
            L+TG   G+G      L        +L    RN ++ K++ D +   ++   I  + + 
Sbjct: 24  ILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKNHSNIHILEIDLR 82

Query: 113 FSGDLDEGVERIKEA--IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
                D+ V  I+     +GL+V  L NN GI+   AR    V    L + ++ N     
Sbjct: 83  NFDAYDKLVADIEGVTKDQGLNV--LFNNAGIAPKSARI-TAVRSQELLDTLQTNTVVPI 139

Query: 171 KVTQAVLPGMLKRKK-----------GAIVNIGSGAA-IVIPSDPLYSVYAATKAYIDQF 218
            + +A LP + K  K            AI+N+ S    I   +D     Y  +K+ ++  
Sbjct: 140 MLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAA 199

Query: 219 SRSLYVEYRKSGIDV 233
           ++SL V+     I  
Sbjct: 200 TKSLSVDLYPQRIMC 214

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 91.1 bits (227), Expect = 4e-22
 Identities = 40/189 (21%), Positives = 72/189 (38%), Gaps = 30/189 (15%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            LVTG   GIG++     A+ G +LV V R    L +          + +  +VV D S 
Sbjct: 9   ILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEA-----VAALEAEAIAVVADVSD 63

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
              ++       E    L    + +  G+    A        +           +++VN+
Sbjct: 64  PKAVEAVFAEALEEFGRLH--GVAHFAGV----AH-----SALSWNLPLEAWEKVLRVNL 112

Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
            G+  V +     +   + G++V  GS A +        + YAA K  +   +R+L +E 
Sbjct: 113 TGSFLVARKAGEVL--EEGGSLVLTGSVAGLGAFGL---AHYAAGKLGVVGLARTLALEL 167

Query: 227 RKSGIDVQC 235
            + G+ V  
Sbjct: 168 ARKGVRVNV 176

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 89.5 bits (223), Expect = 2e-21
 Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 24/194 (12%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLV-------------GRNPDKLKDVSDSIQAKYA 102
           A +TG   G G++ A ++A  G +++ V               +PD L +    ++A  A
Sbjct: 14  AFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEA--A 71

Query: 103 KTQIKSVVVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKN 160
             +I + VVD      L + V+    A+  LD  +++ N G++ P  + + ++     ++
Sbjct: 72  NRRIVAAVVDTRDFDRLRKVVDDGVAALGRLD--IIVANAGVAAP--QAWDDITPEDFRD 127

Query: 161 LIKVNVEGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFS 219
           ++ +NV GT     A  P +++  + G+I+ I S A +     P    Y A+K  +   +
Sbjct: 128 VMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK--MQPFMIHYTASKHAVTGLA 185

Query: 220 RSLYVEYRKSGIDV 233
           R+   E  K  I V
Sbjct: 186 RAFAAELGKHSIRV 199

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 87.7 bits (218), Expect = 2e-21
 Identities = 22/179 (12%), Positives = 57/179 (31%), Gaps = 33/179 (18%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK-DVSDSIQAKYAKTQIKSVVVDFS 114
            L+ G +  +G +   +L K    ++  GR+   +  D+++                   
Sbjct: 6   ILLIGASGTLGSAVKERLEKKA-EVITAGRHSGDVTVDITNI------------------ 46

Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
               + ++++ E +  +D   +++  G +        E+        I   + G   +  
Sbjct: 47  ----DSIKKMYEQVGKVDA--IVSATGSATFSP--LTELTPEKNAVTISSKLGGQINLVL 98

Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
             +  +    KG+                  +  A     +  F++S  +E    GI +
Sbjct: 99  LGIDSL--NDKGSFTLTTGIMMED--PIVQGASAAMANGAVTAFAKSAAIEM-PRGIRI 152

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 89.6 bits (223), Expect = 2e-21
 Identities = 40/193 (20%), Positives = 78/193 (40%), Gaps = 22/193 (11%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLV------------GRNPDKLKDVSDSIQAKYAK 103
           A +TG   G G+S A  LA+ G +++ +               PD L +    ++A    
Sbjct: 31  AFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEA--LG 88

Query: 104 TQIKSVVVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNL 161
            +I +  VD      +   V+     +  LD  +++ N  ++    R  + +D    +++
Sbjct: 89  RRIIASQVDVRDFDAMQAAVDDGVTQLGRLD--IVLANAALASEGTR-LNRMDPKTWRDM 145

Query: 162 IKVNVEGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSR 220
           I VN+ G     +  +P ++  K+ G+IV   S   +          Y A+K  +    R
Sbjct: 146 IDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLR--GAENIGNYIASKHGLHGLMR 203

Query: 221 SLYVEYRKSGIDV 233
           ++ +E     I V
Sbjct: 204 TMALELGPRNIRV 216

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 87.8 bits (218), Expect = 5e-21
 Identities = 42/198 (21%), Positives = 79/198 (39%), Gaps = 26/198 (13%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVG--RNPDKLKDVSDSIQAKYAKTQIKSVVVDF 113
            +VTG   GIG     QL K      ++   R+ +K  ++          +++  + +  
Sbjct: 6   VVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL-----KSIKDSRVHVLPLTV 60

Query: 114 S--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
           +    LD  V ++ E +    + +LINN G+   Y     E ++ ++   + VN      
Sbjct: 61  TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNT-EPNRAVIAEQLDVNTTSVVL 119

Query: 172 VTQAVLPGMLK-----------RKKGAIVNIGSGAA-IVIPSDPLYSV----YAATKAYI 215
           +TQ +LP +               + A++ I SG   I   +          Y  +KA I
Sbjct: 120 LTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAI 179

Query: 216 DQFSRSLYVEYRKSGIDV 233
           + F R+L V+ +   + V
Sbjct: 180 NMFGRTLAVDLKDDNVLV 197

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 87.8 bits (218), Expect = 6e-21
 Identities = 38/203 (18%), Positives = 67/203 (33%), Gaps = 55/203 (27%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK-DVSDSIQAKYAKTQIKSVVVDFS 114
            +++G   GIG +    L   G  +V +     ++  D+S +   K A   I  V+   S
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQA---IADVLAKCS 60

Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
             +D                 L+   G+              +L N++ VN  G T++  
Sbjct: 61  KGMD----------------GLVLCAGLGPQTK---------VLGNVVSVNYFGATELMD 95

Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPL--------------------------YSVY 208
           A LP + K  + A V I S A+  +  D                               Y
Sbjct: 96  AFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAY 155

Query: 209 AATKAYIDQFSRSLYVEYRKSGI 231
           A +K  +    R     + ++G+
Sbjct: 156 AGSKNALTVAVRKRAAAWGEAGV 178

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 87.6 bits (218), Expect = 1e-20
 Identities = 45/197 (22%), Positives = 79/197 (40%), Gaps = 26/197 (13%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLV----------------GRNPDKLKDVSDSIQA 99
           A VTG   G G+S A +LA+ G +++ V                   P+ L + +D ++ 
Sbjct: 14  AFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKG 73

Query: 100 KYAKTQIKSVVVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVL 157
                +I +  VD      L   V+   E +  LD+  ++ N GI         +  +  
Sbjct: 74  --HNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDI--IVANAGIG-NGGDTLDKTSEED 128

Query: 158 LKNLIKVNVEGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKAYID 216
              +I +N+ G  K  +A +P M+   + G+I+   S   +   + P    Y A K  + 
Sbjct: 129 WTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLK--AYPHTGHYVAAKHGVV 186

Query: 217 QFSRSLYVEYRKSGIDV 233
              R+  VE  +  I V
Sbjct: 187 GLMRAFGVELGQHMIRV 203

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 85.7 bits (213), Expect = 3e-20
 Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 37/190 (19%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            LVTG   GIG + A   A  G  + +  R+ +                   +V  D + 
Sbjct: 24  VLVTGGNRGIGLAIARAFADAGDKVAITYRSGE-------------PPEGFLAVKCDITD 70

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
              +++  + I+E    ++V  LI N G++    +     DQ+L++       ++++ N+
Sbjct: 71  TEQVEQAYKEIEETHGPVEV--LIANAGVT----K-----DQLLMRMSEEDFTSVVETNL 119

Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IPSDPLYSVYAATKAYIDQFSRSLYVE 225
            GT +V +     ML+ KKG +V I S   +V +      + YAA+KA +  F+RSL  E
Sbjct: 120 TGTFRVVKRANRAMLRAKKGRVVLISS---VVGLLGSAGQANYAASKAGLVGFARSLARE 176

Query: 226 YRKSGIDVQC 235
                I    
Sbjct: 177 LGSRNITFNV 186

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 85.7 bits (213), Expect = 3e-20
 Identities = 45/189 (23%), Positives = 76/189 (40%), Gaps = 35/189 (18%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            LVTG   GIG + A +LA  G  + +  R                A   +  V VD + 
Sbjct: 18  VLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG-------------APKGLFGVEVDVTD 64

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
              +D     ++E    ++V  L++N G+S          D  L++        +I  N+
Sbjct: 65  SDAVDRAFTAVEEHQGPVEV--LVSNAGLS----A-----DAFLMRMTEEKFEKVINANL 113

Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
            G  +V Q     M + K G ++ IGS + +        + YAA+KA +   +RS+  E 
Sbjct: 114 TGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW--GIGNQANYAASKAGVIGMARSIAREL 171

Query: 227 RKSGIDVQC 235
            K+ +    
Sbjct: 172 SKANVTANV 180

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 86.0 bits (214), Expect = 4e-20
 Identities = 49/199 (24%), Positives = 79/199 (39%), Gaps = 36/199 (18%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGR------------NPDKLKDVSDSIQAKYAK 103
           AL+TG   G+G+S A  LA+ G ++ +  R              D L +    ++     
Sbjct: 13  ALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEK--TG 70

Query: 104 TQIKSVVVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARF-------FHEVD 154
            +  S  VD      L+  V   ++ + G+D+   I N GIS   A         + EV 
Sbjct: 71  RRCISAKVDVKDRAALESFVAEAEDTLGGIDI--AITNAGIS-TIALLPEVESAQWDEV- 126

Query: 155 QVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAY 214
                  I  N+ GT     AV PGM+KR  G IV + S       ++   + Y ++K  
Sbjct: 127 -------IGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHS--ANFAQASYVSSKWG 177

Query: 215 IDQFSRSLYVEYRKSGIDV 233
           +   ++    +    GI V
Sbjct: 178 VIGLTKCAAHDLVGYGITV 196

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 85.7 bits (213), Expect = 5e-20
 Identities = 41/196 (20%), Positives = 74/196 (37%), Gaps = 29/196 (14%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLV------------GRNPDKLKDVSDSIQAKYAK 103
           A +TG   G G++ A +LA  G +++ V               P++L      ++     
Sbjct: 16  AFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVED--IG 73

Query: 104 TQIKSVVVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEV-DQVLLKN 160
           ++I +   D      L   ++   + +  LD  +++ N GI+        +    V    
Sbjct: 74  SRIVARQADVRDRESLSAALQAGLDELGRLD--IVVANAGIAPM--SAGDDGWHDV---- 125

Query: 161 LIKVNVEGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIV--IPSDPLYSVYAATKAYIDQ 217
            I VN+ G     +  +P ++K+   G+IV I S A +     +DP    Y A K  +  
Sbjct: 126 -IDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVG 184

Query: 218 FSRSLYVEYRKSGIDV 233
             R          I V
Sbjct: 185 LMRVYANLLAGQMIRV 200

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 85.3 bits (212), Expect = 9e-20
 Identities = 56/187 (29%), Positives = 81/187 (43%), Gaps = 23/187 (12%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSV---VVD 112
           ALVTG   GIG++ A   A+ G ++ +    P + +D      A+  K  I+      V 
Sbjct: 52  ALVTGGDSGIGRAAAIAYAREGADVAINYL-PAEEED------AQQVKALIEECGRKAVL 104

Query: 113 FSGDL-DEG-----VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNV 166
             GDL DE      V + +EA+ GLD+  L    G          ++     +    VNV
Sbjct: 105 LPGDLSDESFARSLVHKAREALGGLDI--LALVAGKQTAIPEI-KDLTSEQFQQTFAVNV 161

Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
                +TQ  +P +   K  +I+   S  A   PS P    YAATKA I  +SR L  + 
Sbjct: 162 FALFWITQEAIPLL--PKGASIITTSSIQAY-QPS-PHLLDYAATKAAILNYSRGLAKQV 217

Query: 227 RKSGIDV 233
            + GI V
Sbjct: 218 AEKGIRV 224

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 84.5 bits (210), Expect = 1e-19
 Identities = 47/194 (24%), Positives = 84/194 (43%), Gaps = 24/194 (12%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLV-------------GRNPDKLKDVSDSIQAKYA 102
           A +TG   G G+S A +LA  G +++                 +P+ L + +  ++ +  
Sbjct: 18  AFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGR 77

Query: 103 KTQIKSVVVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKN 160
           K    + V+D      L E V    E    LD  V++ N G+         E+       
Sbjct: 78  K--ALTRVLDVRDDAALRELVADGMEQFGRLD--VVVANAGVLSW--GRVWELTDEQWDT 131

Query: 161 LIKVNVEGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFS 219
           +I VN+ GT +  +A +P M++    G+IV + S A +   + P    Y+A+K  +   +
Sbjct: 132 VIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLK--ATPGNGHYSASKHGLTALT 189

Query: 220 RSLYVEYRKSGIDV 233
            +L +E  + GI V
Sbjct: 190 NTLAIELGEYGIRV 203

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 84.6 bits (210), Expect = 1e-19
 Identities = 38/202 (18%), Positives = 67/202 (33%), Gaps = 35/202 (17%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLV------------GRNPDKLKDVSDSIQAKYAK 103
            LVTG   G G+S A +LA+ G +++L                   L++    ++     
Sbjct: 13  VLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEK--TG 70

Query: 104 TQIKSVVVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEV-DQVLLKN 160
            +  +  VD      +   +         LD  V++ N GI    A    +         
Sbjct: 71  RKAYTAEVDVRDRAAVSRELANAVAEFGKLD--VVVANAGICPLGAHLPVQAFADA---- 124

Query: 161 LIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV---------IPSDPLYSVYAAT 211
              V+  G      A LP +      +I+  GS A ++          P  P  + Y+  
Sbjct: 125 -FDVDFVGVINTVHAALPYLTSG--ASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYA 181

Query: 212 KAYIDQFSRSLYVEYRKSGIDV 233
           K  +D ++  L  +     I  
Sbjct: 182 KQLVDSYTLQLAAQLAPQSIRA 203

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 84.6 bits (210), Expect = 2e-19
 Identities = 45/200 (22%), Positives = 85/200 (42%), Gaps = 37/200 (18%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLV------------GRNPDKLKDVSDSIQAKYAK 103
           A +TG   G G++ A +LA+ G ++V +              +P++LK+    ++ +  +
Sbjct: 49  AFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRR 108

Query: 104 TQIKSVVVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARF-------FHEVD 154
             I +   D      L   V+        +D  +L++NVGIS             + ++ 
Sbjct: 109 --IIARQADVRDLASLQAVVDEALAEFGHID--ILVSNVGIS-NQGEVVSLTDQQWSDI- 162

Query: 155 QVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATKA 213
                  ++ N+ G     +AVLP M++R + G+++ + S   +     P  S YAA+K 
Sbjct: 163 -------LQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLR--GAPGQSHYAASKH 213

Query: 214 YIDQFSRSLYVEYRKSGIDV 233
            +     SL  E  +  I V
Sbjct: 214 GVQGLMLSLANEVGRHNIRV 233

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 84.7 bits (210), Expect = 5e-19
 Identities = 39/200 (19%), Positives = 74/200 (37%), Gaps = 48/200 (24%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A+VTG   GIG + A   A+ G  +V +  +        + ++    K    ++ +D + 
Sbjct: 216 AVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-----EDLKRVADKVGGTALTLDVT- 269

Query: 116 DLDEGVERIKEAIE--GLDVGVLINNVGISYPYARFFHEVDQVLLK-------NLIKVNV 166
             D   +      E  G  V +L+NN GI+    R     D++L          +I VN+
Sbjct: 270 ADDAVDKITAHVTEHHGGKVDILVNNAGIT----R-----DKLLANMDEKRWDAVIAVNL 320

Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV-----------YAATKAYI 215
               ++T+ ++      + G ++ + S             +           YA TKA +
Sbjct: 321 LAPQRLTEGLVGNGTIGEGGRVIGLSS-------------MAGIAGNRGQTNYATTKAGM 367

Query: 216 DQFSRSLYVEYRKSGIDVQC 235
              + +L       GI +  
Sbjct: 368 IGLAEALAPVLADKGITINA 387

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 82.0 bits (203), Expect = 2e-18
 Identities = 45/194 (23%), Positives = 86/194 (44%), Gaps = 28/194 (14%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVL--VGRNPDKLKDVSDSIQAKYAKTQIKSV---- 109
            LVTG   G+G+++A   A+ G  +V+  +G +         S  A     +I+      
Sbjct: 12  VLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKG--VGKGSSAADKVVEEIRRRGGKA 69

Query: 110 VVDFSGDLDEGVERIKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNV 166
           V ++   ++ G + +K A++    +DV  ++NN GI     R F  +       + +V++
Sbjct: 70  VANY-DSVEAGEKLVKTALDTFGRIDV--VVNNAGILRD--RSFSRISDEDWDIIQRVHL 124

Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY-----SVYAATKAYIDQFSRS 221
            G+ +VT+A    M K+  G I+   S +        +Y     + Y+A K  +   + +
Sbjct: 125 RGSFQVTRAAWDHMKKQNYGRIIMTASASG-------IYGNFGQANYSAAKLGLLGLANT 177

Query: 222 LYVEYRKSGIDVQC 235
           L +E RK+ I    
Sbjct: 178 LVIEGRKNNIHCNT 191

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 81.4 bits (201), Expect = 9e-18
 Identities = 43/192 (22%), Positives = 80/192 (41%), Gaps = 24/192 (12%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVL---------VGRNPDKLKDVSDSIQAKYAKTQI 106
           A+VTG   G+G+ +A   A+ G  +V+          G +      V D I+    +   
Sbjct: 22  AVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE--- 78

Query: 107 KSVVVDFSGDLDEGVERIKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIK 163
               V     + +G + I+ AI+    +D+  L+NN GI     R   +  +     +  
Sbjct: 79  ---AVADYNSVIDGAKVIETAIKAFGRVDI--LVNNAGILRD--RSLVKTSEQDWNLVND 131

Query: 164 VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
           V+++G+ K TQA  P M K+  G I+   S + I    +     Y A K  +   + ++ 
Sbjct: 132 VHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIY--GNFGQVNYTAAKMGLIGLANTVA 189

Query: 224 VEYRKSGIDVQC 235
           +E  ++ +    
Sbjct: 190 IEGARNNVLCNV 201

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 78.9 bits (195), Expect = 1e-17
 Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 13/144 (9%)

Query: 56  ALVTGPTDGIGKSFAFQLAK-TGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           ALVTG   GIG +    L +    ++VL  R+  + +     +QA+      +   +D  
Sbjct: 7   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLS--PRFHQLDID 64

Query: 115 GDLD---EGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
            DL       + +++   GLD  VL+NN GI++  A        +  +  +K N  GT  
Sbjct: 65  -DLQSIRALRDFLRKEYGGLD--VLVNNAGIAFKVAD--PTPFHIQAEVTMKTNFFGTRD 119

Query: 172 VTQAVLPGMLKRKKGAIVNIGSGA 195
           V   +LP  L + +G +VN+ S  
Sbjct: 120 VCTELLP--LIKPQGRVVNVSSIM 141

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 80.1 bits (198), Expect = 2e-17
 Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 20/188 (10%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVV 111
               L+TG   G+GK +A   AK G  +V+   N         D I+A   +        
Sbjct: 322 DKVVLITGAGAGLGKEYAKWFAKYGAKVVV---NDFKDATKTVDEIKAAGGE------AW 372

Query: 112 DFSGDLDEGVERI-KEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVE 167
               D+ +  E I K  I+    +D+  L+NN GI     R F ++ +    ++ +V++ 
Sbjct: 373 PDQHDVAKDSEAIIKNVIDKYGTIDI--LVNNAGILRD--RSFAKMSKQEWDSVQQVHLI 428

Query: 168 GTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR 227
           GT  +++   P  ++++ G I+NI S + I    +   + Y+++KA I   S+++ +E  
Sbjct: 429 GTFNLSRLAWPYFVEKQFGRIINITSTSGIY--GNFGQANYSSSKAGILGLSKTMAIEGA 486

Query: 228 KSGIDVQC 235
           K+ I V  
Sbjct: 487 KNNIKVNI 494

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 79.7 bits (197), Expect = 3e-17
 Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 34/197 (17%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVL---------VGRNPDKLKDVSDSIQAKYAKTQI 106
            ++TG   G+GK ++ + AK G  +V+          G N      V D I         
Sbjct: 11  VIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV--- 67

Query: 107 KSVVVDFSGDLDEGVERIKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIK 163
              V D+  ++ +G + ++ A++    + V  +INN GI         ++ +   K +I 
Sbjct: 68  --AVADY-NNVLDGDKIVETAVKNFGTVHV--IINNAGILRD--ASMKKMTEKDYKLVID 120

Query: 164 VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY-----SVYAATKAYIDQF 218
           V++ G   VT+A  P   K+K G IVN  S A        LY     + YA+ K+ +  F
Sbjct: 121 VHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAG-------LYGNFGQANYASAKSALLGF 173

Query: 219 SRSLYVEYRKSGIDVQC 235
           + +L  E  K  I    
Sbjct: 174 AETLAKEGAKYNIKANA 190

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 77.6 bits (192), Expect = 4e-17
 Identities = 51/187 (27%), Positives = 80/187 (42%), Gaps = 24/187 (12%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSV---VVD 112
            L+TG   GIG++ +   AK G N+ +       L +  D   A   K  ++      V 
Sbjct: 50  VLITGGDSGIGRAVSIAFAKEGANIAIA-----YLDEEGD---ANETKQYVEKEGVKCVL 101

Query: 113 FSGDL-DEG-----VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNV 166
             GDL DE      V+     +  L++  L+NNV   YP       +    L+   ++N+
Sbjct: 102 LPGDLSDEQHCKDIVQETVRQLGSLNI--LVNNVAQQYPQQGL-EYITAEQLEKTFRINI 158

Query: 167 EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY 226
                VT+A L  +  ++   I+N  S  A    ++ L   Y+ATK  I  F+RSL    
Sbjct: 159 FSYFHVTKAALSHL--KQGDVIINTASIVA-YEGNETLID-YSATKGAIVAFTRSLSQSL 214

Query: 227 RKSGIDV 233
            + GI V
Sbjct: 215 VQKGIRV 221

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 75.4 bits (185), Expect = 4e-16
 Identities = 35/171 (20%), Positives = 63/171 (36%), Gaps = 34/171 (19%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A+VTG   GIG     QL+  G+ +VL  R+  K  +  + ++    +  +    +D + 
Sbjct: 15  AVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHE-NVVFHQLDVTD 73

Query: 116 DLD---EGVERIKEAIEGLDVGVLINNVGISYP--------------------------- 145
            +       + IK     LD+  L+NN G++                             
Sbjct: 74  PIATMSSLADFIKTHFGKLDI--LVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEK 131

Query: 146 -YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGA 195
             A+        L +  +K+N  G   VT+ ++P +       IVN+ S  
Sbjct: 132 PEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSST 182

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 74.2 bits (183), Expect = 7e-16
 Identities = 39/194 (20%), Positives = 75/194 (38%), Gaps = 24/194 (12%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI--QAKYAKTQIKSVV 110
           G+ A+V+G   G+G++   +L   GL +V+     +K K ++D +  +A++  T + S  
Sbjct: 30  GASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTS-- 87

Query: 111 VDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYP---YARFFHEVDQVLLKNLIKVNVE 167
                 +   +E   +         ++ + G         R     D       I + + 
Sbjct: 88  ---EDSVLAAIEAANQLGRLRY--AVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLN 142

Query: 168 GTTKVTQAVLPGMLKRK------KGAIVNIGSGAAIV--IPSDPLYSVYAATKAYIDQFS 219
           GT  V + V   +   +      +GA+V   S A     I      + YAA KA +   +
Sbjct: 143 GTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQ----TAYAAAKAGVIGLT 198

Query: 220 RSLYVEYRKSGIDV 233
            +   +   +GI V
Sbjct: 199 IAAARDLSSAGIRV 212

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 72.3 bits (178), Expect = 2e-15
 Identities = 33/176 (18%), Positives = 65/176 (36%), Gaps = 29/176 (16%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI--QAKYAKTQIKSVV 110
               +VTG + G+G +    LA+ G  ++ +   P   ++ +  +    ++    + +  
Sbjct: 7   SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTN-- 64

Query: 111 VDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFF-----HEVDQVLLKNLIKVN 165
                D    +   K+    +    L+N  G +    +       H +D       + VN
Sbjct: 65  ---EADATAALAFAKQEFGHVH--GLVNCAGTAPG-EKILGRSGPHALDS--FARTVAVN 116

Query: 166 VEGTTKVTQAVLPGMLKRK------KGAIVNIGSGAAIVIPSDPLY--SVYAATKA 213
           + GT  + +     M + +      +G IVN  S AA     D     + YAA+K 
Sbjct: 117 LIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAF----DGQIGQAAYAASKG 168

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 70.8 bits (174), Expect = 9e-15
 Identities = 41/198 (20%), Positives = 79/198 (39%), Gaps = 31/198 (15%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI--QAKYAKTQIKSVV 110
           G  A++TG   G+G + A +L   G + VL+       +  +  +     +A   + S  
Sbjct: 12  GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS-- 69

Query: 111 VDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFF-------HEVDQVLLKNLIK 163
                D+   +   K     +D  V +N  GI+   ++ +       H ++    + ++ 
Sbjct: 70  ---EKDVQTALALAKGKFGRVD--VAVNCAGIAVA-SKTYNLKKGQTHTLED--FQRVLD 121

Query: 164 VNVEGTTKVTQAVLPGMLKRK------KGAIVNIGSGAAIVIPSDPLY--SVYAATKAYI 215
           VN+ GT  V + V   M + +      +G I+N  S AA     +     + Y+A+K  I
Sbjct: 122 VNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAF----EGQVGQAAYSASKGGI 177

Query: 216 DQFSRSLYVEYRKSGIDV 233
              +  +  +    GI V
Sbjct: 178 VGMTLPIARDLAPIGIRV 195

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 68.6 bits (168), Expect = 9e-14
 Identities = 52/207 (25%), Positives = 74/207 (35%), Gaps = 44/207 (21%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVL--VGRNPDKLKDVSDSIQAKYAKTQIKS----- 108
            +VTG   GIG++ A   A  G  +V+  +G   D     S    A+    +I +     
Sbjct: 30  VIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDG-SPASGGSAAQSVVDEITAAGGEA 88

Query: 109 -VVVDFSGDLDEGVERIKEAIE---GLDVGVLINNVGISYPYARFFH-----EVDQVLLK 159
                   D D+    I+ A+E   GLD  VL+NN GI     R        E D V   
Sbjct: 89  VADGSNVADWDQAAGLIQTAVETFGGLD--VLVNNAGIVRD--RMIANTSEEEFDAV--- 141

Query: 160 NLIKVNVEGTTKVTQAVLPGM------LKRKKGAIVNIGSGAAIVIPSDPLY-----SVY 208
             I V+++G     +             K   G I+N  SGA        L        Y
Sbjct: 142 --IAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAG-------LQGSVGQGNY 192

Query: 209 AATKAYIDQFSRSLYVEYRKSGIDVQC 235
           +A KA I   +     E  + G+ V  
Sbjct: 193 SAAKAGIATLTLVGAAEMGRYGVTVNA 219

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 58.8 bits (143), Expect = 1e-10
 Identities = 40/192 (20%), Positives = 72/192 (37%), Gaps = 37/192 (19%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVTG   G+G++ A  L   G  +V++    +            Y +  +         
Sbjct: 5   ALVTGGASGLGRAAALALKARGYRVVVLDLRREGE-------DLIYVEGDVTR------- 50

Query: 116 DLDEGVER-IKEAIEGLDVGVLINNVGISYPYARFF-----HEVDQVLLKNLIKVNVEGT 169
             +E V R +  A E   +  +++  G+     +       H ++    + +++VN+ GT
Sbjct: 51  --EEDVRRAVARAQEEAPLFAVVSAAGVGLA-EKILGKEGPHGLES--FRRVLEVNLLGT 105

Query: 170 TKVTQAVLPGMLKRK------KGAIVNIGSGAAIVIPSDPLY--SVYAATKAYIDQFSRS 221
             V +     M +        +G IVN  S AA     +     + YAA+K  +   +  
Sbjct: 106 FNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAF----EGQIGQAAYAASKGGVVALTLP 161

Query: 222 LYVEYRKSGIDV 233
              E    GI V
Sbjct: 162 AARELAGWGIRV 173

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 58.4 bits (142), Expect = 2e-10
 Identities = 29/177 (16%), Positives = 64/177 (36%), Gaps = 33/177 (18%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
            + A+VTG   G+G +   +L   G  +V++    + +              + +    D
Sbjct: 9   DAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV--------VADLGDRARFAAAD 60

Query: 113 FSGDLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFF-----HEVDQVLLKNLIKVNV 166
            +   +  V    +  E +  + +++N  G      R         +     + ++ +N+
Sbjct: 61  VT--DEAAVASALDLAETMGTLRIVVNCAGTGNA-IRVLSRDGVFSLAA--FRKIVDINL 115

Query: 167 EGTTKVTQAVLPGMLKRK--------KGAIVNIGSGAAIVIPSDPLY--SVYAATKA 213
            G+  V +     + K +        +G I+N  S AA     D     + Y+A+K 
Sbjct: 116 VGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAF----DGQIGQAAYSASKG 168

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 57.2 bits (139), Expect = 6e-10
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 9/90 (10%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            ++TG   G+G   A +LA+ G  +++  R+  K +  + ++       Q++   +D   
Sbjct: 19  VVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAG-----QVEVRELDLQ- 72

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYP 145
           DL   V R  + + G D  VLINN GI   
Sbjct: 73  DLS-SVRRFADGVSGAD--VLINNAGIMAV 99

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 53.3 bits (128), Expect = 1e-08
 Identities = 29/146 (19%), Positives = 51/146 (34%), Gaps = 19/146 (13%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  A+V   T  +G   A  LA  G  +VL GR  DK +  +DS+  ++   ++     +
Sbjct: 119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF---KVNVTAAE 175

Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
            + D         EA++G         +G+          + Q   +N   + +      
Sbjct: 176 TADD-----ASRAEAVKGAHFVFTAGAIGLE--------LLPQAAWQNESSIEIVADYNA 222

Query: 173 TQ-AVLPGMLKRKKGAIVN--IGSGA 195
                + G+    KG         GA
Sbjct: 223 QPPLGIGGIDATDKGKEYGGKRAFGA 248

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 38.5 bits (90), Expect = 8e-04
 Identities = 24/185 (12%), Positives = 61/185 (32%), Gaps = 43/185 (23%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
           ++ G +  +G +   +    G  +  V R+P+K+K  ++ ++                 D
Sbjct: 8   VLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKV-------------KKAD 54

Query: 117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAV 176
           +   ++ + E  +G D   +I+     +               ++    ++    +   V
Sbjct: 55  VSS-LDEVCEVCKGAD--AVISAFNPGWNN------------PDIYDETIKVYLTIIDGV 99

Query: 177 LPGMLKRKKGAIVNIGS-GAAIVIPSDPLYS-------VYAATKAYIDQFSRSLYVEYRK 228
               + R     + +G  G+  + P   L         +    KA  + +   L    ++
Sbjct: 100 KKAGVNR----FLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFY---LNFLMKE 152

Query: 229 SGIDV 233
             ID 
Sbjct: 153 KEIDW 157

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 38.4 bits (90), Expect = 8e-04
 Identities = 31/181 (17%), Positives = 63/181 (34%), Gaps = 45/181 (24%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
            + G T  +GKS    L+ T   +    R  +++   ++              V     D
Sbjct: 4   FIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNN--------------VKAVHFD 49

Query: 117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAV 176
           +D   E + + + G+D   +IN  G                 K+L+KV++ G  K+ QA 
Sbjct: 50  VDWTPEEMAKQLHGMD--AIINVSGSG--------------GKSLLKVDLYGAVKLMQAA 93

Query: 177 LPGMLKRKKGAIVNIGSGAA-----IVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
               +KR     + + +  +      +         Y   K + D +        +++ +
Sbjct: 94  EKAEVKR----FILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLT------KETNL 143

Query: 232 D 232
           D
Sbjct: 144 D 144

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	255
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.97
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.97
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.97
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.97
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.97
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.97
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.96
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.96
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.95
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.95
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.94
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.94
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.93
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.93
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.91
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.89
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.89
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.89
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.89
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.89
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.88
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.88
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.88
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.88
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.87
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.87
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.87
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.87
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.86
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.86
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.86
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.86
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.85
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.85
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.85
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.85
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.85
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.84
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.84
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.84
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.84
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.84
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.84
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.83
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.83
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.83
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.83
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.83
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.82
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.82
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.82
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.82
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.82
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.82
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.82
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.81
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.81
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.81
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.81
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.81
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.81
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.8
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.8
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.8
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.8
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.8
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.79
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.79
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.79
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.79
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.78
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.78
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.77
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.77
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.77
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.77
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.76
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.75
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.75
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.74
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.73
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.73
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.73
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.7
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.7
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.7
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.67
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.67
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.66
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.65
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.62
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.61
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.58
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.56
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.55
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.55
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.55
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.54
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.53
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.5
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.49
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.47
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.46
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.39
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.22
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.16
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.06
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	99.01
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.91
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.86
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.74
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.73
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.67
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.65
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.65
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.63
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.63
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.62
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.58
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.57
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.57
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.56
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.5
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.46
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.45
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.38
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.37
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.36
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.36
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.36
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.35
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.35
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.34
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.34
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.34
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.33
4eye_A	342	Probable oxidoreductase; structural genomics, niai	98.29
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.24
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.18
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	98.15
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.12
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.12
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	98.11
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.1
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	98.09
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.08
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.06
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.99
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.97
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.95
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.93
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.9
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.89
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.87
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.85
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.8
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.76
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.75
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.72
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.71
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.7
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.7
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.68
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.67
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.67
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.66
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.63
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.62
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.62
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.61
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.59
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.56
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.56
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.55
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	97.54
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.52
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.51
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.5
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.49
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.49
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.48
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.45
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.45
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	97.42
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.42
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.42
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	97.41
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.41
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.41
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.38
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.38
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.36
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	97.34
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.34
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	97.32
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	97.3
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.28
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.26
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.26
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	97.25
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	97.2
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.19
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	97.18
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.18
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.18
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	97.17
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.17
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.09
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	97.07
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	97.06
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.02
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.01
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.0
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.0
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.97
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.96
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.96
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.94
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.94
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.91
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.89
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.88
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.84
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.81
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	96.75
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.75
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.69
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.68
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.66
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.64
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.62
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.61
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.6
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	96.57
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.56
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.54
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.53
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	96.53
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.53
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.52
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	96.51
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.45
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.43
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.43
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	96.41
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.4
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.4
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	96.38
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.33
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.31
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.31
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.29
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.29
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	96.27
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	96.26
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	96.25
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.25
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.24
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.23
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.19
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	96.18
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.18
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.17
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	96.15
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	96.14
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.13
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.12
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.12
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.11
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.09
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.08
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.06
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	96.06
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.05
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.04
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	96.04
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.03
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.0
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	95.99
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	95.99
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	95.99
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	95.99
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	95.97
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	95.95
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	95.95
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	95.92
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	95.91
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	95.91
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.91

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=1.6e-48  Score=323.29  Aligned_cols=195  Identities=27%  Similarity=0.271  Sum_probs=178.7

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      .+++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.+  .+...+.+|++|  ++++.++++.+
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~~   80 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG--KEVLGVKADVSKKKDVEEFVRRTFE   80 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999999999998763  567889999998  46788889999


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .++++|  +||||||+... ..++.+.+.|+|++++++|+.|+++++|+++|+|+++++|+||++||.++..  +.|+..
T Consensus        81 ~~G~iD--iLVNNAGi~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~--~~~~~~  155 (254)
T 4fn4_A           81 TYSRID--VLCNNAGIMDG-VTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIR--GGFAGA  155 (254)
T ss_dssp             HHSCCC--EEEECCCCCCT-TCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC--SSSSCH
T ss_pred             HcCCCC--EEEECCcccCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcC--CCCCCh
Confidence            998655  99999998643 3568999999999999999999999999999999999999999999999998  778899


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      +|++||+|+.+|+|+|+.|++++|||||+|+||+|+|||.+...
T Consensus       156 ~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~  199 (254)
T 4fn4_A          156 PYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSS  199 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCS
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCccccccc
Confidence            99999999999999999999999999999999999999976543

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=1.4e-47  Score=317.81  Aligned_cols=193  Identities=24%  Similarity=0.325  Sum_probs=177.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.+  .+...+.+|++|  ++++.++++.+.
T Consensus         6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (255)
T 4g81_D            6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG--YDAHGVAFDVTDELAIEAAFSKLDAE   83 (255)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999999999999999998864  467889999998  457777888888


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECCccccccCCCCCch
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      +++  +|+||||||+...  .++.+.+.|+|++++++|+.|+++++|+++|+|+++ ++|+||++||..+..  +.|+..
T Consensus        84 ~G~--iDiLVNNAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~--~~~~~~  157 (255)
T 4g81_D           84 GIH--VDILINNAGIQYR--KPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQA--ARPTVA  157 (255)
T ss_dssp             TCC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS--BCTTCH
T ss_pred             CCC--CcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcC--CCCCch
Confidence            885  5599999999754  679999999999999999999999999999999765 579999999999988  778999


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      +|++||+|+.+|+|+|+.|++++|||||+|+||+|+|||.+...
T Consensus       158 ~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~  201 (255)
T 4g81_D          158 PYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALI  201 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhccc
Confidence            99999999999999999999999999999999999999988765

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=3.1e-46  Score=307.16  Aligned_cols=189  Identities=24%  Similarity=0.307  Sum_probs=164.9

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      ++++||+++||||++|||+++|++|+++|++|++++|+..  ++..+++.+.+  .+...+.+|++|+  +.   +++.+
T Consensus         5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g--~~~~~~~~Dv~d~--~~---v~~~~   75 (247)
T 4hp8_A            5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDG--GNASALLIDFADP--LA---AKDSF   75 (247)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTT--CCEEEEECCTTST--TT---TTTSS
T ss_pred             cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhC--CcEEEEEccCCCH--HH---HHHHH
Confidence            4688999999999999999999999999999999999865  45566666653  4678899999985  11   22222


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCchh
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ....+|+||||||+...  .++.+.++++|++++++|+.|+|+++|+++|+|++++ .|+||++||..+..  +.++..+
T Consensus        76 ~~g~iDiLVNNAGi~~~--~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~--g~~~~~~  151 (247)
T 4hp8_A           76 TDAGFDILVNNAGIIRR--ADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQ--GGIRVPS  151 (247)
T ss_dssp             TTTCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS--CCSSCHH
T ss_pred             HhCCCCEEEECCCCCCC--CCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCC--CCCCChH
Confidence            23357799999999754  6789999999999999999999999999999998775 79999999999998  7889999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      |++||+|+.+|+|+|+.|++++|||||+|+||+|+|||.+...
T Consensus       152 Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~  194 (247)
T 4hp8_A          152 YTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALR  194 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcc
Confidence            9999999999999999999999999999999999999998764

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=8e-46  Score=309.91  Aligned_cols=188  Identities=27%  Similarity=0.339  Sum_probs=166.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      +++||++|||||++|||+++|++|+++|++|++++|+++++++..+++     +.+...+.+|++|  ++++.++++.+.
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~-----g~~~~~~~~Dv~~~~~v~~~~~~~~~~  100 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-----GGGAVGIQADSANLAELDRLYEKVKAE  100 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999998888776     3456788999998  467788888998


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|+||||||+...  .++.+.++|+|++++++|+.|+++++|+++|+|++  +|+||++||..+..  +.|...+
T Consensus       101 ~G~--iDiLVNNAG~~~~--~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~--~G~IInisS~~~~~--~~~~~~~  172 (273)
T 4fgs_A          101 AGR--IDVLFVNAGGGSM--LPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR--GSSVVLTGSTAGST--GTPAFSV  172 (273)
T ss_dssp             HSC--EEEEEECCCCCCC--CCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGGS--CCTTCHH
T ss_pred             cCC--CCEEEECCCCCCC--CChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCeEEEEeehhhcc--CCCCchH
Confidence            885  6699999998754  67999999999999999999999999999999954  58999999999988  7899999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      |++||+|+.+|+|+|+.|++++|||||+|+||+++||+++++.
T Consensus       173 Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~  215 (273)
T 4fgs_A          173 YAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELA  215 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC-------
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhh
Confidence            9999999999999999999999999999999999999987664

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=1.2e-44  Score=301.22  Aligned_cols=192  Identities=20%  Similarity=0.257  Sum_probs=166.5

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIK  125 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~  125 (255)
                      +++++||+++||||++|||+++|++|+++|++|++++|++++.+ ..+++.+.+  .+...+.+|++|  ++++.++++.
T Consensus         2 ~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~v~~~~   78 (258)
T 4gkb_A            2 DLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQRQ--PRATYLPVELQDDAQCRDAVAQTI   78 (258)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHHC--TTCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhcC--CCEEEEEeecCCHHHHHHHHHHHH
Confidence            46788999999999999999999999999999999999988754 445555553  456788999998  4577888899


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCc
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~  205 (255)
                      +.++++|  +||||||+...   ...+.+.|+|++.+++|+.++++++|+++|+|+++ +|+||++||..+..  +.|+.
T Consensus        79 ~~~G~iD--iLVNnAGi~~~---~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~--~~~~~  150 (258)
T 4gkb_A           79 ATFGRLD--GLVNNAGVNDG---IGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-RGAIVNISSKTAVT--GQGNT  150 (258)
T ss_dssp             HHHSCCC--EEEECCCCCCC---CCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTHHHH--CCSSC
T ss_pred             HHhCCCC--EEEECCCCCCC---CCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEeehhhcc--CCCCc
Confidence            9998655  99999998643   24578999999999999999999999999999654 59999999999998  78899


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      .+|++||+|+.+|+|+|+.|++++|||||+|+||+|+|||.+++.
T Consensus       151 ~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~  195 (258)
T 4gkb_A          151 SGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWI  195 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC----
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhh
Confidence            999999999999999999999999999999999999999987654

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=2.9e-45  Score=300.80  Aligned_cols=181  Identities=28%  Similarity=0.364  Sum_probs=158.2

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      ++||+++||||++|||+++|++|+++|++|++++|+++++++.        ...++..+.+|++|+  +.++++.+++++
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~--------~~~~~~~~~~Dv~~~--~~v~~~~~~~g~   78 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP--------RHPRIRREELDITDS--QRLQRLFEALPR   78 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC--------CCTTEEEEECCTTCH--HHHHHHHHHCSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh--------hcCCeEEEEecCCCH--HHHHHHHHhcCC
Confidence            5799999999999999999999999999999999998776532        145688899999985  667778888885


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchH
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA  210 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~a  210 (255)
                        +|+||||||+..    ++++.+.++|++++++|+.|+++++|+++|+|+++ +|+||++||..+..  +.|+..+|++
T Consensus        79 --iDiLVNNAGi~~----~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~--~~~~~~~Y~a  149 (242)
T 4b79_A           79 --LDVLVNNAGISR----DREEYDLATFERVLRLNLSAAMLASQLARPLLAQR-GGSILNIASMYSTF--GSADRPAYSA  149 (242)
T ss_dssp             --CSEEEECCCCCC----GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CEEEEEECCGGGTS--CCSSCHHHHH
T ss_pred             --CCEEEECCCCCC----CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeeccccC--CCCCCHHHHH
Confidence              559999999863    46789999999999999999999999999988654 69999999999998  7889999999


Q ss_pred             HHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          211 TKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       211 sK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      ||+|+.+|+|+|+.|++++|||||+|+||+|+|||.+...
T Consensus       150 sKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~  189 (242)
T 4b79_A          150 SKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLK  189 (242)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----C
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhccc
Confidence            9999999999999999999999999999999999987654

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=3.6e-44  Score=296.00  Aligned_cols=185  Identities=20%  Similarity=0.294  Sum_probs=163.8

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~  130 (255)
                      +|+||||||++|||+++|++|+++|++|++++|+++++++..++      ..+...+.+|++|  ++++.++++.+.+++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~   75 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE------RPNLFYFHGDVADPLTLKKFVEYAMEKLQR   75 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT------CTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh------cCCEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            58999999999999999999999999999999998877655433      3457888999998  457888888999986


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchH
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA  210 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~a  210 (255)
                      +|  +||||||+...  .++.+.+.|+|++++++|+.|+++++|+++|+|+++ +|+||++||..+..  +.|+..+|++
T Consensus        76 iD--iLVNNAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~G~IInisS~~~~~--~~~~~~~Y~a  148 (247)
T 3ged_A           76 ID--VLVNNACRGSK--GILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN-KGRIINIASTRAFQ--SEPDSEAYAS  148 (247)
T ss_dssp             CC--EEEECCCCCCC--CGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCGGGTS--CCTTCHHHHH
T ss_pred             CC--EEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCcEEEEeeccccc--CCCCCHHHHH
Confidence            55  99999999754  679999999999999999999999999999999875 59999999999998  7889999999


Q ss_pred             HHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhhh
Q 025260          211 TKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLVM  251 (255)
Q Consensus       211 sK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~  251 (255)
                      ||+|+.+|+|+|+.|+++ |||||+|+||+++|++.+++.+
T Consensus       149 sKaal~~ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~~  188 (247)
T 3ged_A          149 AKGGIVALTHALAMSLGP-DVLVNCIAPGWINVTEQQEFTQ  188 (247)
T ss_dssp             HHHHHHHHHHHHHHHHTT-TSEEEEEEECSBCCCC---CCH
T ss_pred             HHHHHHHHHHHHHHHHCC-CCEEEEEecCcCCCCCcHHHHH
Confidence            999999999999999997 9999999999999999887654

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=2.8e-44  Score=299.75  Aligned_cols=186  Identities=20%  Similarity=0.234  Sum_probs=163.9

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      ++++||+++||||++|||+++|++|+++|++|++++|+.++.            ..+...+.+|+++  ++++.++++.+
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~   74 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG------------LPEELFVEADLTTKEGCAIVAEATRQ   74 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT------------SCTTTEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC------------CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            478899999999999999999999999999999999986531            1122467899997  45777788888


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC-Cc
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP-LY  205 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~-~~  205 (255)
                      .++++  |+||||||+......++.+.+.|+|++++++|+.++++++|+++|+|+++++|+||++||..+..  +.| +.
T Consensus        75 ~~G~i--DilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~--~~~~~~  150 (261)
T 4h15_A           75 RLGGV--DVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVL--PLPEST  150 (261)
T ss_dssp             HTSSC--SEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTTC
T ss_pred             HcCCC--CEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhcc--CCCCcc
Confidence            88864  59999999875544678999999999999999999999999999999999999999999999987  555 57


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      ..|++||+|+.+|+++|+.|++++|||||+|+||+|+|||.+++.
T Consensus       151 ~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~  195 (261)
T 4h15_A          151 TAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLA  195 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhh
Confidence            899999999999999999999999999999999999999987654

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=5.7e-42  Score=285.74  Aligned_cols=195  Identities=15%  Similarity=0.140  Sum_probs=172.0

Q ss_pred             cccCCcEEEEECCCC--chHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHH
Q 025260           49 LRKYGSWALVTGPTD--GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERI  124 (255)
Q Consensus        49 ~~~~gk~vlITGas~--gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~  124 (255)
                      ++++||+++||||+|  |||+++|++|+++|++|++++|+++.++++.+++.+.+ ..+...+.+|+++  ++++.++++
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~   80 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN-QPEAHLYQIDVQSDEEVINGFEQI   80 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT-CSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCcEEEEEccCCCHHHHHHHHHHH
Confidence            357799999999875  99999999999999999999999999999888877654 4567889999998  457788888


Q ss_pred             HHHhcCCCccEEEEecCCCCC--cccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC
Q 025260          125 KEAIEGLDVGVLINNVGISYP--YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD  202 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~  202 (255)
                      .+.++++|  +||||||+...  ...++.+.+.++|+..+++|+.+++.+++.+.|.|.  ++|+||++||..+..  +.
T Consensus        81 ~~~~G~iD--~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~--~~G~IVnisS~~~~~--~~  154 (256)
T 4fs3_A           81 GKDVGNID--GVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMP--EGGSIVATTYLGGEF--AV  154 (256)
T ss_dssp             HHHHCCCS--EEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCT--TCEEEEEEECGGGTS--CC
T ss_pred             HHHhCCCC--EEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCEEEEEecccccc--Cc
Confidence            88888655  99999998643  223567889999999999999999999999999774  469999999999998  78


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      |+...|++||+|+.+|+|+|+.|++++|||||+|+||+++||+.+...
T Consensus       155 ~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~  202 (256)
T 4fs3_A          155 QNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVG  202 (256)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhcc
Confidence            899999999999999999999999999999999999999999987654

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=9.3e-42  Score=285.81  Aligned_cols=196  Identities=19%  Similarity=0.271  Sum_probs=178.6

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      ++++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+..++..+.+|++|  ++++.++++.+
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER   83 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            4577999999999999999999999999999999999999999999999876656668999999998  35677788888


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .+++  +|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..  +.++..
T Consensus        84 ~~g~--id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~  157 (265)
T 3lf2_A           84 TLGC--ASILVNNAGQGRV--STFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQ--PEPHMV  157 (265)
T ss_dssp             HHCS--CSEEEECCCCCCC--BCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTS--CCTTBH
T ss_pred             HcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCC--CCCCch
Confidence            8885  5599999998754  668899999999999999999999999999999988899999999999988  778899


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      .|++||+|+++|+++|+.|++++||+||+|+||+++||+.+...
T Consensus       158 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~  201 (265)
T 3lf2_A          158 ATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRF  201 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhh
Confidence            99999999999999999999999999999999999999876643

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=4.7e-41  Score=280.17  Aligned_cols=193  Identities=22%  Similarity=0.293  Sum_probs=174.5

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIK  125 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~  125 (255)
                      .++++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++..+.+|++|  ++++.++++.
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~   84 (256)
T 3gaf_A            7 PFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA--GGKAIGLECNVTDEQHREAVIKAAL   84 (256)
T ss_dssp             TTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999999999998888765  4568889999998  3567778888


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCc
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~  205 (255)
                      +.+++  +|+||||||+...  .++ +.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..  +.++.
T Consensus        85 ~~~g~--id~lv~nAg~~~~--~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~  157 (256)
T 3gaf_A           85 DQFGK--ITVLVNNAGGGGP--KPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGEN--TNVRM  157 (256)
T ss_dssp             HHHSC--CCEEEECCCCCCC--CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTC--CCTTC
T ss_pred             HHcCC--CCEEEECCCCCCC--CCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcC--CCCCc
Confidence            88885  5599999998754  446 88999999999999999999999999999998899999999999988  77889


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ..|++||+|+++|+++++.|++++||+||+|+||+++|++.+..
T Consensus       158 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~  201 (256)
T 3gaf_A          158 ASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATV  201 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhc
Confidence            99999999999999999999999999999999999999987654

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=5.3e-41  Score=278.64  Aligned_cols=190  Identities=25%  Similarity=0.403  Sum_probs=171.8

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      ++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++..     ....+.+|++|  ++++.++++.+
T Consensus         5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~Dv~d~~~v~~~~~~~~~   79 (248)
T 3op4_A            5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD-----NGKGMALNVTNPESIEAVLKAITD   79 (248)
T ss_dssp             TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG-----GEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-----cceEEEEeCCCHHHHHHHHHHHHH
Confidence            456799999999999999999999999999999999999988888777643     35778999998  35777788888


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .+++  +|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|+|++++.|+||++||..+..  +.++..
T Consensus        80 ~~g~--iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~--~~~~~~  153 (248)
T 3op4_A           80 EFGG--VDILVNNAGITRD--NLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTM--GNAGQA  153 (248)
T ss_dssp             HHCC--CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH--CCTTCH
T ss_pred             HcCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC--CCCCCh
Confidence            8885  5599999998754  568899999999999999999999999999999988899999999999988  778899


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .|++||+|+++|+++++.|++++||+||+|+||+++|++.+..
T Consensus       154 ~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~  196 (248)
T 3op4_A          154 NYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL  196 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc
Confidence            9999999999999999999999999999999999999998754

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.9e-41  Score=281.87  Aligned_cols=198  Identities=24%  Similarity=0.306  Sum_probs=166.9

Q ss_pred             cccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHH
Q 025260           47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERI  124 (255)
Q Consensus        47 ~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~  124 (255)
                      ...+++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.+ ...+..+.+|++|  ++++.++++
T Consensus        27 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~  105 (281)
T 4dry_A           27 GKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT-GNIVRAVVCDVGDPDQVAALFAAV  105 (281)
T ss_dssp             -------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCeEEEEEcCCCCHHHHHHHHHHH
Confidence            3445779999999999999999999999999999999999999999998887765 3346889999998  457777888


Q ss_pred             HHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC--CcEEEEECCccccccCCC
Q 025260          125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK--KGAIVNIGSGAAIVIPSD  202 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~--~g~iv~vsS~~~~~~~~~  202 (255)
                      .+.+++  +|+||||||+... ..++.+.+.++|++.+++|+.|+++++++++|.|++++  .|+||++||..+..  +.
T Consensus       106 ~~~~g~--iD~lvnnAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~--~~  180 (281)
T 4dry_A          106 RAEFAR--LDLLVNNAGSNVP-PVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQT--PR  180 (281)
T ss_dssp             HHHHSC--CSEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTC--CC
T ss_pred             HHHcCC--CCEEEECCCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCC--CC
Confidence            888885  5599999998643 25688999999999999999999999999999998875  69999999999988  77


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      ++...|++||+|+++|+++++.|++++||+||+|+||+++|+|.+.+.
T Consensus       181 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~  228 (281)
T 4dry_A          181 PNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMS  228 (281)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhc
Confidence            889999999999999999999999999999999999999999987654

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=8.1e-41  Score=279.68  Aligned_cols=194  Identities=25%  Similarity=0.291  Sum_probs=174.7

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIK  125 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~  125 (255)
                      -++++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+ ..++..+.+|++|  ++++.++++.
T Consensus         5 m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (262)
T 3pk0_A            5 MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG-SGKVIGVQTDVSDRAQCDALAGRAV   83 (262)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS-SSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999999999999887654 3578899999998  4567778888


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccc-ccCCCCC
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAI-VIPSDPL  204 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~-~~~~~~~  204 (255)
                      +.+++  +|+||||||+...  .++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+. .  +.++
T Consensus        84 ~~~g~--id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~--~~~~  157 (262)
T 3pk0_A           84 EEFGG--IDVVCANAGVFPD--APLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPIT--GYPG  157 (262)
T ss_dssp             HHHSC--CSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTB--CCTT
T ss_pred             HHhCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccC--CCCC
Confidence            88885  5599999998754  56889999999999999999999999999999998888999999999886 5  6688


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ...|++||+|+++|+++++.|++++||+||+|+||++.|++...
T Consensus       158 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  201 (262)
T 3pk0_A          158 WSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLE  201 (262)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHT
T ss_pred             ChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccc
Confidence            89999999999999999999999999999999999999997654

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=6.7e-41  Score=278.67  Aligned_cols=193  Identities=18%  Similarity=0.161  Sum_probs=163.7

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      ++++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++++.  +.++..+.+|++|.  +++.++++.+
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA--GGRIVARSLDARNEDEVTAFLNAADA   80 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECcCCCHHHHHHHHHHHHh
Confidence            3467999999999999999999999999999999999999999999998876  45788999999983  4666677766


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      . +  ++|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..  +.++..
T Consensus        81 ~-g--~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~  153 (252)
T 3h7a_A           81 H-A--PLEVTIFNVGANVN--FPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLR--GGSGFA  153 (252)
T ss_dssp             H-S--CEEEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTC--CCTTCH
T ss_pred             h-C--CceEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcC--CCCCCc
Confidence            6 5  57799999999754  568899999999999999999999999999999988889999999999988  778899


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceE-EEeeeeeeeeCCcchhh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDV-QCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v-~~v~Pg~v~T~~~~~~~  250 (255)
                      .|++||+|+++|+++|+.|++++||+| |+++||+++|+|.+...
T Consensus       154 ~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~  198 (252)
T 3h7a_A          154 AFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERR  198 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------------
T ss_pred             cHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccc
Confidence            999999999999999999999999999 99999999999987653

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=7.2e-41  Score=280.70  Aligned_cols=193  Identities=29%  Similarity=0.420  Sum_probs=176.3

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      ++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.+++..+..+.+|+++.  +.++++.+.+
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~   83 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTE--QGCQDVIEKY   83 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSH--HHHHHHHHHC
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCH--HHHHHHHHhc
Confidence            45779999999999999999999999999999999999999999999998887777888999999975  5566777777


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++  +|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..  +.++...|
T Consensus        84 g~--id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~Y  157 (267)
T 3t4x_A           84 PK--VDILINNLGIFEP--VEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIM--PSQEMAHY  157 (267)
T ss_dssp             CC--CSEEEECCCCCCC--CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTS--CCTTCHHH
T ss_pred             CC--CCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhcc--CCCcchHH
Confidence            64  5699999999754  568899999999999999999999999999999998889999999999988  77889999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ++||+|+++|+++++.|+.++||+||+|+||+++|++.+.+
T Consensus       158 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~  198 (267)
T 3t4x_A          158 SATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETM  198 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHH
Confidence            99999999999999999999999999999999999987654

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.9e-40  Score=277.99  Aligned_cols=194  Identities=30%  Similarity=0.398  Sum_probs=175.2

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      ++++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++..+.+|++|.  +++.++++.+
T Consensus        16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~   94 (266)
T 4egf_A           16 LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF-GTDVHTVAIDLAEPDAPAELARRAAE   94 (266)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999999988887643 45688999999974  5777888888


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCc
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~  205 (255)
                      .+++  +|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..  +.++.
T Consensus        95 ~~g~--id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~  168 (266)
T 4egf_A           95 AFGG--LDVLVNNAGISHP--QPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALA--PLPDH  168 (266)
T ss_dssp             HHTS--CSEEEEECCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--CCTTC
T ss_pred             HcCC--CCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhcc--CCCCC
Confidence            8885  5599999999754  5688999999999999999999999999999998776 68999999999988  77889


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ..|++||+|+++|+++++.|++++||+||+|+||++.|++.+..
T Consensus       169 ~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  212 (266)
T 4egf_A          169 YAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRV  212 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhh
Confidence            99999999999999999999999999999999999999987654

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=3.5e-40  Score=278.36  Aligned_cols=191  Identities=25%  Similarity=0.334  Sum_probs=171.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCC------------hhhHHHHHHHHHhhcCCceEEEEEEECCC--
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN------------PDKLKDVSDSIQAKYAKTQIKSVVVDFSG--  115 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--  115 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+            .+.+++..+++.+.  +.++..+.+|++|  
T Consensus         7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~   84 (281)
T 3s55_A            7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT--GRRCISAKVDVKDRA   84 (281)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc--CCeEEEEeCCCCCHH
Confidence            4679999999999999999999999999999999997            55666666666654  4568889999998  


Q ss_pred             CcHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcc
Q 025260          116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGA  195 (255)
Q Consensus       116 ~~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~  195 (255)
                      ++++.++++.+.+++  +|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||..
T Consensus        85 ~v~~~~~~~~~~~g~--id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~  160 (281)
T 3s55_A           85 ALESFVAEAEDTLGG--IDIAITNAGISTI--ALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSML  160 (281)
T ss_dssp             HHHHHHHHHHHHHTC--CCEEEECCCCCCC--CCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             HHHHHHHHHHHhcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChh
Confidence            457778888888885  5599999998754  568899999999999999999999999999999988899999999999


Q ss_pred             ccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          196 AIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       196 ~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      +..  +.++...|++||+|+++|+++|+.|++++||+||+|+||++.|||.+.
T Consensus       161 ~~~--~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  211 (281)
T 3s55_A          161 GHS--ANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHN  211 (281)
T ss_dssp             GGS--CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSS
T ss_pred             hcC--CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccc
Confidence            988  778899999999999999999999999999999999999999999764

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=1.2e-40  Score=279.99  Aligned_cols=193  Identities=23%  Similarity=0.356  Sum_probs=175.2

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      ++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.  +.++..+.+|++|  ++++.++++.+
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~   99 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV--GHDAEAVAFDVTSESEIIEAFARLDE   99 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999999999998765  3467888999998  35677777877


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .+++  +|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..  +.++..
T Consensus       100 ~~g~--iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~--~~~~~~  173 (271)
T 4ibo_A          100 QGID--VDILVNNAGIQFR--KPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSEL--ARATVA  173 (271)
T ss_dssp             HTCC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--BCTTCH
T ss_pred             HCCC--CCEEEECCCCCCC--CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCC--CCCCch
Confidence            7775  5599999998754  568899999999999999999999999999999988889999999999988  678899


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .|++||+|+++|+++|+.|++++||+||+|+||++.|+|.+..
T Consensus       174 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  216 (271)
T 4ibo_A          174 PYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQAL  216 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhc
Confidence            9999999999999999999999999999999999999998765

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.9e-40  Score=276.55  Aligned_cols=189  Identities=25%  Similarity=0.323  Sum_probs=164.4

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHhc
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAIE  129 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~  129 (255)
                      ++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++..+.+|++|  ++++.++++.+.++
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   80 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA--GGTALAQVLDVTDRHSVAAFAQAAVDTWG   80 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999999999999999999988775  4567889999998  35677788888888


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhch
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA  209 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~  209 (255)
                      +  +|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||..+..  +.++...|+
T Consensus        81 ~--iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~--~~~~~~~Y~  154 (264)
T 3tfo_A           81 R--IDVLVNNAGVMPL--SPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALS--VVPTAAVYC  154 (264)
T ss_dssp             C--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC--CCTTCHHHH
T ss_pred             C--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcc--cCCCChhHH
Confidence            5  5599999999754  568899999999999999999999999999999988899999999999988  778899999


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      +||+|+++|+++|+.|+ + ||+||+|+||+++|+|.+...
T Consensus       155 asKaal~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~  193 (264)
T 3tfo_A          155 ATKFAVRAISDGLRQES-T-NIRVTCVNPGVVESELAGTIT  193 (264)
T ss_dssp             HHHHHHHHHHHHHHHHC-S-SEEEEEEEECCC---------
T ss_pred             HHHHHHHHHHHHHHHhC-C-CCEEEEEecCCCcCccccccc
Confidence            99999999999999998 4 999999999999999987654

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.2e-40  Score=278.34  Aligned_cols=196  Identities=23%  Similarity=0.278  Sum_probs=172.9

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++..+.+|++|  ++++.++++.+
T Consensus        24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (283)
T 3v8b_A           24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA--GGQAIALEADVSDELQMRNAVRDLVL  101 (283)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4567999999999999999999999999999999999999999998888654  4568889999998  35777888888


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .+++  +|+||||||+... ..++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+....+.++..
T Consensus       102 ~~g~--iD~lVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~  178 (283)
T 3v8b_A          102 KFGH--LDIVVANAGINGV-WAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGAT  178 (283)
T ss_dssp             HHSC--CCEEEECCCCCCC-BCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCH
T ss_pred             HhCC--CCEEEECCCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCch
Confidence            8885  5599999998643 256889999999999999999999999999999998888999999999886633457789


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .|++||+|+++|+++++.|++++||+||+|+||+++|++.+..
T Consensus       179 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  221 (283)
T 3v8b_A          179 AYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNT  221 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCT
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCccccc
Confidence            9999999999999999999999999999999999999998754

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=4.4e-40  Score=277.28  Aligned_cols=191  Identities=23%  Similarity=0.365  Sum_probs=171.3

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeC-------------ChhhHHHHHHHHHhhcCCceEEEEEEECCC-
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-------------NPDKLKDVSDSIQAKYAKTQIKSVVVDFSG-  115 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-  115 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|             +.+.+++..+++.+.  +.++..+.+|++| 
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~   85 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA--NRRIVAAVVDTRDF   85 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCH
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCCCH
Confidence            467999999999999999999999999999999998             677777777777654  4568889999998 


Q ss_pred             -CcHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECC
Q 025260          116 -DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGS  193 (255)
Q Consensus       116 -~~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS  193 (255)
                       ++++.++++.+.+++  +|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||
T Consensus        86 ~~v~~~~~~~~~~~g~--id~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS  161 (277)
T 3tsc_A           86 DRLRKVVDDGVAALGR--LDIIVANAGVAAP--QAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISS  161 (277)
T ss_dssp             HHHHHHHHHHHHHHSC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             HHHHHHHHHHHHHcCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEcc
Confidence             457777888888885  5599999999754  5688999999999999999999999999999998876 799999999


Q ss_pred             ccccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          194 GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       194 ~~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ..+..  +.++...|++||+|+++|+++|+.|++++||+||+|+||+++|+|.+.
T Consensus       162 ~~~~~--~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  214 (277)
T 3tsc_A          162 AAGMK--MQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSG  214 (277)
T ss_dssp             GGGTS--CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSH
T ss_pred             HhhCC--CCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccc
Confidence            99988  778899999999999999999999999999999999999999999765

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=1.2e-40  Score=276.73  Aligned_cols=194  Identities=24%  Similarity=0.283  Sum_probs=166.8

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCC-ceEEEEEEECCC--CcHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAK-TQIKSVVVDFSG--DLDEGVERIK  125 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~--~~~~~~~~~~  125 (255)
                      +++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++.+..+. .++..+.+|++|  ++++.++++.
T Consensus         3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (250)
T 3nyw_A            3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH   82 (250)
T ss_dssp             --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence            3467999999999999999999999999999999999999999999998876544 678889999998  3567778888


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCc
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~  205 (255)
                      +.++  ++|+||||||+...  .++ +.+.++|++.+++|+.|++.++++++|.|++++.|+||++||..+..  +.+..
T Consensus        83 ~~~g--~iD~lvnnAg~~~~--~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~  155 (250)
T 3nyw_A           83 QKYG--AVDILVNAAAMFMD--GSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKY--GFADG  155 (250)
T ss_dssp             HHHC--CEEEEEECCCCCCC--CCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC---------CCT
T ss_pred             HhcC--CCCEEEECCCcCCC--CCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcC--CCCCC
Confidence            8777  46699999999754  345 77889999999999999999999999999988899999999999887  44558


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ..|++||+|+++|+++|+.|++++||+||+|+||+++|+|.+..
T Consensus       156 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~  199 (250)
T 3nyw_A          156 GIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKA  199 (250)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHT
T ss_pred             cchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhc
Confidence            89999999999999999999999999999999999999987654

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.4e-40  Score=279.44  Aligned_cols=192  Identities=25%  Similarity=0.338  Sum_probs=173.9

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.+  .++..+.+|++|  ++++.++++.+.
T Consensus        25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (270)
T 3ftp_A           25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAG--LEGRGAVLNVNDATAVDALVESTLKE  102 (270)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHT--CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            4779999999999999999999999999999999999999999888887763  456778899997  457777888888


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..  +.++...
T Consensus       103 ~g~--iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~  176 (270)
T 3ftp_A          103 FGA--LNVLVNNAGITQD--QLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSA--GNPGQVN  176 (270)
T ss_dssp             HSC--CCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH--CCTTBHH
T ss_pred             cCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC--CCCCchh
Confidence            885  5599999998754  568889999999999999999999999999999988899999999999988  7788999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |++||+|+++|+++|+.|++++||+||+|+||+++|++.+.+
T Consensus       177 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  218 (270)
T 3ftp_A          177 YAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL  218 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc
Confidence            999999999999999999999999999999999999987654

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=4.6e-40  Score=277.73  Aligned_cols=197  Identities=25%  Similarity=0.275  Sum_probs=175.7

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCC-ceEEEEEEECCC--CcHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAK-TQIKSVVVDFSG--DLDEGVERI  124 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~--~~~~~~~~~  124 (255)
                      .++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.+.. .++..+.+|++|  ++++.++++
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   85 (281)
T 3svt_A            6 QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAV   85 (281)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999999999999998876432 378899999998  356777888


Q ss_pred             HHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                      .+.+++  +|+||||||+... ..++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..  +.++
T Consensus        86 ~~~~g~--id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~  160 (281)
T 3svt_A           86 TAWHGR--LHGVVHCAGGSEN-IGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASN--THRW  160 (281)
T ss_dssp             HHHHSC--CCEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS--CCTT
T ss_pred             HHHcCC--CCEEEECCCcCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcC--CCCC
Confidence            888885  5599999998433 3568899999999999999999999999999999998899999999999988  7788


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ...|++||+|+++|+++++.|++++||+||+|+||++.|++.+..
T Consensus       161 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~  205 (281)
T 3svt_A          161 FGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAI  205 (281)
T ss_dssp             CTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc
Confidence            899999999999999999999999999999999999999998764

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=6.8e-40  Score=277.27  Aligned_cols=193  Identities=24%  Similarity=0.323  Sum_probs=171.1

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCC----------------hhhHHHHHHHHHhhcCCceEEEEEEE
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN----------------PDKLKDVSDSIQAKYAKTQIKSVVVD  112 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~----------------~~~~~~~~~~~~~~~~~~~~~~~~~d  112 (255)
                      .+++||+++||||++|||+++|++|+++|++|++++|+                .+++++..+++.+.  +.++..+.+|
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D   84 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH--NRRIVTAEVD   84 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT--TCCEEEEECC
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc--CCceEEEEcC
Confidence            34679999999999999999999999999999999987                66777777777654  4568899999


Q ss_pred             CCC--CcHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEE
Q 025260          113 FSG--DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIV  189 (255)
Q Consensus       113 ~~~--~~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv  189 (255)
                      ++|  ++++.++++.+.+++  +|+||||||+... ..++.+.+.++|++++++|+.|+++++++++|+|++++ .|+||
T Consensus        85 v~~~~~v~~~~~~~~~~~g~--id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv  161 (286)
T 3uve_A           85 VRDYDALKAAVDSGVEQLGR--LDIIVANAGIGNG-GDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSII  161 (286)
T ss_dssp             TTCHHHHHHHHHHHHHHHSC--CCEEEECCCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred             CCCHHHHHHHHHHHHHHhCC--CCEEEECCcccCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEE
Confidence            998  457777888888885  5599999998754 23478899999999999999999999999999998765 79999


Q ss_pred             EECCccccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          190 NIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       190 ~vsS~~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++||..+..  +.++...|++||+|+++|+++|+.|++++||+||+|+||+++|+|.+.
T Consensus       162 ~isS~~~~~--~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  218 (286)
T 3uve_A          162 LTSSVGGLK--AYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHN  218 (286)
T ss_dssp             EECCGGGTS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSS
T ss_pred             EECchhhcc--CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccc
Confidence            999999988  778899999999999999999999999999999999999999999864

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=6.6e-40  Score=276.63  Aligned_cols=191  Identities=24%  Similarity=0.340  Sum_probs=171.9

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeC-------------ChhhHHHHHHHHHhhcCCceEEEEEEECCC-
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-------------NPDKLKDVSDSIQAKYAKTQIKSVVVDFSG-  115 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-  115 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|             +.+++++..+++.+.  +.++..+.+|++| 
T Consensus        12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~   89 (280)
T 3pgx_A           12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ--GRKALTRVLDVRDD   89 (280)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT--TCCEEEEECCTTCH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEEcCCCCH
Confidence            467999999999999999999999999999999998             677788888777665  4567889999998 


Q ss_pred             -CcHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECC
Q 025260          116 -DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGS  193 (255)
Q Consensus       116 -~~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS  193 (255)
                       ++++.++++.+.+++  +|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|+|++++ .|+||++||
T Consensus        90 ~~v~~~~~~~~~~~g~--id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  165 (280)
T 3pgx_A           90 AALRELVADGMEQFGR--LDVVVANAGVLSW--GRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSS  165 (280)
T ss_dssp             HHHHHHHHHHHHHHCC--CCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred             HHHHHHHHHHHHHcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcc
Confidence             357777888888885  5599999999754  5688999999999999999999999999999998875 799999999


Q ss_pred             ccccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          194 GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       194 ~~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ..+..  +.++...|++||+|+++|+++|+.|++++||+||+|+||+++||+.+.
T Consensus       166 ~~~~~--~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  218 (280)
T 3pgx_A          166 SAGLK--ATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEP  218 (280)
T ss_dssp             GGGTS--CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCH
T ss_pred             hhhcc--CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccch
Confidence            99988  778899999999999999999999999999999999999999999875

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=4.1e-40  Score=274.82  Aligned_cols=191  Identities=24%  Similarity=0.271  Sum_probs=172.9

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEE-eCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHh
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAI  128 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~  128 (255)
                      +||+++||||++|||+++|++|+++|++|++. +|+.+.+++..+++.+.  +.++..+.+|++|  ++++.++++.+.+
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL--GVKVLVVKANVGQPAKIKEMFQQIDETF   80 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            48999999999999999999999999999997 89999999888888765  4568889999998  3577778888888


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++  +|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|+|++++.|+||++||..+..  +.++...|
T Consensus        81 g~--id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~--~~~~~~~Y  154 (258)
T 3oid_A           81 GR--LDVFVNNAASGVL--RPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIR--YLENYTTV  154 (258)
T ss_dssp             SC--CCEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTS--BCTTCHHH
T ss_pred             CC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCC--CCCCcHHH
Confidence            85  5599999998654  568899999999999999999999999999999998899999999999988  67889999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++.+...
T Consensus       155 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~  196 (258)
T 3oid_A          155 GVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFP  196 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCT
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcc
Confidence            999999999999999999999999999999999999987653

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=5.3e-40  Score=276.86  Aligned_cols=191  Identities=26%  Similarity=0.310  Sum_probs=170.9

Q ss_pred             cccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHH
Q 025260           47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERI  124 (255)
Q Consensus        47 ~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~  124 (255)
                      ..++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++..+.+|++|  ++++.++++
T Consensus        21 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~   95 (277)
T 4dqx_A           21 QSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-----GSKAFGVRVDVSSAKDAESMVEKT   95 (277)
T ss_dssp             -CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHH
Confidence            345677999999999999999999999999999999999998888777664     4467889999998  456777888


Q ss_pred             HHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                      .+.+++  +|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..  +.++
T Consensus        96 ~~~~g~--iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~  169 (277)
T 4dqx_A           96 TAKWGR--VDVLVNNAGFGTT--GNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATS--AIAD  169 (277)
T ss_dssp             HHHHSC--CCEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTS--CCTT
T ss_pred             HHHcCC--CCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCc--CCCC
Confidence            888885  5599999998754  568899999999999999999999999999999988889999999999988  7788


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ...|++||+|+++|+++++.|++++||+||+|+||+++|++..+
T Consensus       170 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  213 (277)
T 4dqx_A          170 RTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTK  213 (277)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhh
Confidence            99999999999999999999999999999999999999998443

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.3e-40  Score=280.40  Aligned_cols=193  Identities=25%  Similarity=0.354  Sum_probs=173.9

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCC---cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL---NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI  124 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~---~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~  124 (255)
                      +++||+++||||++|||+++|++|+++|+   +|++++|+.+.+++..+++.+.+++.++..+.+|++|.  ++++++++
T Consensus        30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  109 (287)
T 3rku_A           30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL  109 (287)
T ss_dssp             HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred             hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            36799999999999999999999999998   99999999999999999998877677899999999984  45566666


Q ss_pred             HHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                      .+.+++  +|+||||||+... ..++.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++..  +.++
T Consensus       110 ~~~~g~--iD~lVnnAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~--~~~~  184 (287)
T 3rku_A          110 PQEFKD--IDILVNNAGKALG-SDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRD--AYPT  184 (287)
T ss_dssp             CGGGCS--CCEEEECCCCCCC-CCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS--CCTT
T ss_pred             HHhcCC--CCEEEECCCcCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcC--CCCC
Confidence            666664  5699999998653 2568899999999999999999999999999999988899999999999988  7788


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      ...|++||+|+++|+++|+.|++++||+||+|+||+|+|++..
T Consensus       185 ~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~  227 (287)
T 3rku_A          185 GSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSL  227 (287)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcccc
Confidence            9999999999999999999999999999999999999999853

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=6.6e-40  Score=275.44  Aligned_cols=190  Identities=23%  Similarity=0.309  Sum_probs=171.1

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      .+++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++..+.+|++|  ++++.++++.+
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-----GRGAVHHVVDLTNEVSVRALIDFTID   81 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCCeEEEECCCCCHHHHHHHHHHHHH
Confidence            3577999999999999999999999999999999999999988887766     3456778899998  45777788888


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .+++  +|+||||||+......++.+.+.++|++.+++|+.|+++++++++|+|++++.|+||++||..+..  +.++..
T Consensus        82 ~~g~--id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~--~~~~~~  157 (271)
T 3tzq_B           82 TFGR--LDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHA--AYDMST  157 (271)
T ss_dssp             HHSC--CCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS--BCSSCH
T ss_pred             HcCC--CCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcC--CCCCCh
Confidence            8885  559999999874434567899999999999999999999999999999998899999999999988  678899


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      .|++||+|+++|+++++.|++++||+||+|+||++.||+.+
T Consensus       158 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~  198 (271)
T 3tzq_B          158 AYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLE  198 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCcccc
Confidence            99999999999999999999999999999999999999987

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=2.4e-40  Score=274.55  Aligned_cols=189  Identities=28%  Similarity=0.354  Sum_probs=170.2

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++..+.+|++|  ++++.++++.+.
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   77 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----GKKARAIAADISDPGSVKALFAEIQAL   77 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            356999999999999999999999999999999999999888877766     3467889999998  457777888888


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCch
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      +++  +|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|+|++++ .|+||++||..+..  +.++..
T Consensus        78 ~g~--id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~  151 (247)
T 3rwb_A           78 TGG--IDILVNNASIVPF--VAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFA--GTPNMA  151 (247)
T ss_dssp             HSC--CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH--TCTTCH
T ss_pred             CCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhcc--CCCCch
Confidence            885  5599999999754  5688999999999999999999999999999998876 79999999999988  778899


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .|++||+|+++|+++++.|++++||+||+|+||+++|++.+..
T Consensus       152 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~  194 (247)
T 3rwb_A          152 AYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKAS  194 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCcccccc
Confidence            9999999999999999999999999999999999999987654

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=4.7e-40  Score=276.10  Aligned_cols=195  Identities=24%  Similarity=0.322  Sum_probs=174.1

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeC-ChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERI  124 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~  124 (255)
                      .++++||+++||||++|||+++|++|+++|++|++.+| +.+.+++..+++.+.  +.++..+.+|++|  ++++.++++
T Consensus        23 ~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~v~~~~~~~  100 (269)
T 4dmm_A           23 ALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA--GGEAFAVKADVSQESEVEALFAAV  100 (269)
T ss_dssp             -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHH
Confidence            34578999999999999999999999999999999998 677777777777765  4467889999998  457777888


Q ss_pred             HHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                      .+.+++  +|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||.++..  +.++
T Consensus       101 ~~~~g~--id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~  174 (269)
T 4dmm_A          101 IERWGR--LDVLVNNAGITRD--TLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEM--GNPG  174 (269)
T ss_dssp             HHHHSC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHH--CCTT
T ss_pred             HHHcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC--CCCC
Confidence            888885  5599999998754  568899999999999999999999999999999988889999999999988  7788


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      ...|++||+|+++|+++|+.|++++||+||+|+||+++|+|.+...
T Consensus       175 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~  220 (269)
T 4dmm_A          175 QANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELA  220 (269)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccccc
Confidence            9999999999999999999999999999999999999999987654

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=1.6e-39  Score=276.76  Aligned_cols=192  Identities=20%  Similarity=0.313  Sum_probs=171.2

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCC------------hhhHHHHHHHHHhhcCCceEEEEEEECCC--
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN------------PDKLKDVSDSIQAKYAKTQIKSVVVDFSG--  115 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--  115 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+            .+++++..+++.+.  +.++..+.+|++|  
T Consensus        25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~  102 (299)
T 3t7c_A           25 KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL--GRRIIASQVDVRDFD  102 (299)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCHH
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc--CCceEEEECCCCCHH
Confidence            4779999999999999999999999999999999987            67777777777665  4568899999998  


Q ss_pred             CcHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCc
Q 025260          116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSG  194 (255)
Q Consensus       116 ~~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~  194 (255)
                      ++++.++++.+.+++  +|+||||||+... ..++.+.+.++|++.+++|+.|+++++++++|.|++++ .|+||++||.
T Consensus       103 ~v~~~~~~~~~~~g~--iD~lv~nAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~  179 (299)
T 3t7c_A          103 AMQAAVDDGVTQLGR--LDIVLANAALASE-GTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSI  179 (299)
T ss_dssp             HHHHHHHHHHHHHSC--CCEEEECCCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCG
T ss_pred             HHHHHHHHHHHHhCC--CCEEEECCCCCCC-CCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECCh
Confidence            457777888888885  5599999998754 23478899999999999999999999999999988765 7999999999


Q ss_pred             cccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          195 AAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       195 ~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++..  +.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|+|.+.
T Consensus       180 ~~~~--~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  231 (299)
T 3t7c_A          180 GGLR--GAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLN  231 (299)
T ss_dssp             GGTS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSS
T ss_pred             hhcc--CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccc
Confidence            9988  778899999999999999999999999999999999999999999864

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=7.9e-40  Score=273.94  Aligned_cols=193  Identities=23%  Similarity=0.301  Sum_probs=173.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      .++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++..+.+|++|  ++++.++++.+.
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT--GRRALSVGTDITDDAQVAHLVDETMKA   85 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            367999999999999999999999999999999999999999999988765  4568889999998  356777888888


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|+||||||+... ..++.+.+.++|++.+++|+.++++++++++|.|++++ |+||++||..+..  +.++...
T Consensus        86 ~g~--id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~--~~~~~~~  159 (264)
T 3ucx_A           86 YGR--VDVVINNAFRVPS-MKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRH--SQAKYGA  159 (264)
T ss_dssp             TSC--CSEEEECCCSCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGC--CCTTCHH
T ss_pred             cCC--CcEEEECCCCCCC-CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhcc--CCCccHH
Confidence            875  5599999998633 35688999999999999999999999999999998765 9999999999988  7788999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      |++||+|+++|+++++.|++++||+||+|+||++.||+.+...
T Consensus       160 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~  202 (264)
T 3ucx_A          160 YKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYF  202 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHH
Confidence            9999999999999999999999999999999999999987653

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=8e-40  Score=272.12  Aligned_cols=195  Identities=25%  Similarity=0.325  Sum_probs=171.0

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEEC--CC--CcHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF--SG--DLDEGVER  123 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~--~~--~~~~~~~~  123 (255)
                      ...++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.+ ......+.+|+  +|  ++++.+++
T Consensus         7 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   85 (252)
T 3f1l_A            7 QDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET-GRQPQWFILDLLTCTSENCQQLAQR   85 (252)
T ss_dssp             TTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCCceEEEEecccCCHHHHHHHHHH
Confidence            345779999999999999999999999999999999999999999988887765 33567788888  65  34566677


Q ss_pred             HHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC
Q 025260          124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP  203 (255)
Q Consensus       124 ~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~  203 (255)
                      +.+.+++  +|+||||||+... ..++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..  +.+
T Consensus        86 ~~~~~g~--id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~--~~~  160 (252)
T 3f1l_A           86 IAVNYPR--LDGVLHNAGLLGD-VCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQ--GRA  160 (252)
T ss_dssp             HHHHCSC--CSEEEECCCCCCC-CSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTS--CCT
T ss_pred             HHHhCCC--CCEEEECCccCCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhcc--CCC
Confidence            7777775  5599999998543 2568899999999999999999999999999999988899999999999988  778


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      +...|++||+|+++|+++|+.|+++. |+||+|+||+++|+|.+..
T Consensus       161 ~~~~Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~  205 (252)
T 3f1l_A          161 NWGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASA  205 (252)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhh
Confidence            89999999999999999999999887 9999999999999987653

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=5.8e-40  Score=276.90  Aligned_cols=191  Identities=25%  Similarity=0.319  Sum_probs=171.3

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~  128 (255)
                      +++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++..+.+|++|  ++++.++++.+.+
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA--GHDVDGSSCDVTSTDEVHAAVAAAVERF   99 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            56899999999999999999999999999999999999999999988765  4568889999998  3567778888888


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhh--hhhhCCCcEEEEECCccccccCCCCCch
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLP--GMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp--~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      ++  +|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|  .|++++.|+||++||..+..  +.++..
T Consensus       100 g~--id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~--~~~~~~  173 (279)
T 3sju_A          100 GP--IGILVNSAGRNGG--GETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQ--GVMYAA  173 (279)
T ss_dssp             CS--CCEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTS--CCTTCH
T ss_pred             CC--CcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhcc--CCCCCh
Confidence            85  5599999998754  5688999999999999999999999999999  68888889999999999988  778899


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .|++||+|+++|+++|+.|++++||+||+|+||++.|+|.+..
T Consensus       174 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~  216 (279)
T 3sju_A          174 PYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERV  216 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHH
Confidence            9999999999999999999999999999999999999998764

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=1.7e-39  Score=269.30  Aligned_cols=189  Identities=29%  Similarity=0.378  Sum_probs=169.8

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      ++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++..+.+|++|.  +++.++++.+.+
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   82 (247)
T 2jah_A            5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA--GAKVHVLELDVADRQGVDAAVASTVEAL   82 (247)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            56999999999999999999999999999999999999988888888764  34678899999973  466777777777


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++  +|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|++++ |+||++||..+..  +.++...|
T Consensus        83 g~--id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~--~~~~~~~Y  155 (247)
T 2jah_A           83 GG--LDILVNNAGIMLL--GPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRV--NVRNAAVY  155 (247)
T ss_dssp             SC--CSEEEECCCCCCC--CCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTC--CCTTCHHH
T ss_pred             CC--CCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcC--CCCCCcHH
Confidence            75  5599999998743  5688899999999999999999999999999998776 9999999999988  67888999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++||+|+++|+++++.|++++||+||+|+||+++|+|.+.
T Consensus       156 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  195 (247)
T 2jah_A          156 QATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGH  195 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGG
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhc
Confidence            9999999999999999999999999999999999999764

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=7.1e-40  Score=276.10  Aligned_cols=190  Identities=27%  Similarity=0.276  Sum_probs=170.9

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      .+++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++..+.+|++|.  +++.++++.+
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~   99 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-----GCGAAACRVDVSDEQQIIAMVDACVA   99 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCcceEEEecCCCHHHHHHHHHHHHH
Confidence            3477999999999999999999999999999999999999888877766     34577889999983  5677788888


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .+++  +|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..  +.++..
T Consensus       100 ~~g~--iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~--~~~~~~  173 (277)
T 3gvc_A          100 AFGG--VDKLVANAGVVHL--ASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQV--AVGGTG  173 (277)
T ss_dssp             HHSS--CCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS--CCTTBH
T ss_pred             HcCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc--CCCCch
Confidence            8885  5599999999754  568899999999999999999999999999999998899999999999988  778899


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .|++||+|+++|+++++.|++++||+||+|+||++.||+.+..
T Consensus       174 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~  216 (277)
T 3gvc_A          174 AYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTA  216 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHh
Confidence            9999999999999999999999999999999999999987654

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-39  Score=268.62  Aligned_cols=187  Identities=19%  Similarity=0.194  Sum_probs=160.1

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHhc
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAIE  129 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~  129 (255)
                      .+|+++||||++|||+++|++|+++|++|++++|+++++++..+++.     ..+..+.+|++|  ++++.++++.+.++
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~g   76 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG-----NAVIGIVADLAHHEDVDVAFAAAVEWGG   76 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----GGEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-----CCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            37999999999999999999999999999999999999888877762     248889999997  45677788888887


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhch
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA  209 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~  209 (255)
                      +  +|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|++++ |+||++||..+..  +.++...|+
T Consensus        77 ~--id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~--~~~~~~~Y~  149 (235)
T 3l6e_A           77 L--PELVLHCAGTGEF--GPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQV--GKANESLYC  149 (235)
T ss_dssp             S--CSEEEEECCCC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCS--SCSSHHHHH
T ss_pred             C--CcEEEECCCCCCC--CChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcC--CCCCCcHHH
Confidence            5  5599999999643  5688899999999999999999999999999997654 6999999999988  778899999


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      +||+|+++|+++|+.|++++||+||+|+||+++|+|.+...
T Consensus       150 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~  190 (235)
T 3l6e_A          150 ASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTD  190 (235)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC-----
T ss_pred             HHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccC
Confidence            99999999999999999999999999999999999987653

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=3.7e-40  Score=276.27  Aligned_cols=194  Identities=27%  Similarity=0.426  Sum_probs=163.2

Q ss_pred             CCcccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHH
Q 025260           45 PAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVE  122 (255)
Q Consensus        45 ~~~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~  122 (255)
                      |..-.+++||+++||||++|||+++|++|+++|++|++.+|+.+++++..+++     +.++..+.+|++|  ++++.++
T Consensus        19 ~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~   93 (266)
T 3grp_A           19 PGSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-----GKDVFVFSANLSDRKSIKQLAE   93 (266)
T ss_dssp             --CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHH
T ss_pred             CcchhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEeecCCHHHHHHHHH
Confidence            33344678999999999999999999999999999999999998888776654     4568889999998  3567778


Q ss_pred             HHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC
Q 025260          123 RIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD  202 (255)
Q Consensus       123 ~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~  202 (255)
                      ++.+.+++  +|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..  +.
T Consensus        94 ~~~~~~g~--iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~--~~  167 (266)
T 3grp_A           94 VAEREMEG--IDILVNNAGITRD--GLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVV--GN  167 (266)
T ss_dssp             HHHHHHTS--CCEEEECCCCC-------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC--------
T ss_pred             HHHHHcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcC--CC
Confidence            88888885  5599999998754  567889999999999999999999999999999988889999999999988  77


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ++...|++||+|+++|+++++.|++++||+||+|+||++.|++.+..
T Consensus       168 ~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~  214 (266)
T 3grp_A          168 PGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL  214 (266)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc
Confidence            88999999999999999999999999999999999999999987654

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=1.7e-39  Score=273.57  Aligned_cols=196  Identities=21%  Similarity=0.304  Sum_probs=173.1

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      ++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.+  .++..+.+|++|  ++++.++++.+
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~  105 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG--GKALPIRCDVTQPDQVRGMLDQMTG  105 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999999998887653  457788999998  45777888888


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCc
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~  205 (255)
                      .+++  +|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|.|++++ +|+||++||..+......+..
T Consensus       106 ~~g~--iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~  181 (276)
T 3r1i_A          106 ELGG--IDIAVCNAGIVSV--QAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQV  181 (276)
T ss_dssp             HHSC--CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCC
T ss_pred             HcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCc
Confidence            8885  5599999998754  5688999999999999999999999999999998876 489999999988763222467


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      ..|++||+|+++|+++++.|++++||+||+|+||+|+|++.+...
T Consensus       182 ~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~  226 (276)
T 3r1i_A          182 SHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLA  226 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGG
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccch
Confidence            899999999999999999999999999999999999999987653

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.9e-40  Score=275.89  Aligned_cols=191  Identities=20%  Similarity=0.191  Sum_probs=171.8

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~  128 (255)
                      ++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.  +.++..+.+|++|  ++++.++++.+.+
T Consensus         6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (280)
T 3tox_A            6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG--GGEAAALAGDVGDEALHEALVELAVRRF   83 (280)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT--TCCEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            56999999999999999999999999999999999999999988888654  4568889999998  3567778888888


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccc-ccCCCCCchh
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAI-VIPSDPLYSV  207 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~-~~~~~~~~~~  207 (255)
                      ++  +|+||||||+... ..++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+. .  +.++...
T Consensus        84 g~--iD~lvnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~~  158 (280)
T 3tox_A           84 GG--LDTAFNNAGALGA-MGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA--GFAGVAP  158 (280)
T ss_dssp             SC--CCEEEECCCCCCS-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTB--CCTTCHH
T ss_pred             CC--CCEEEECCCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcC--CCCCchh
Confidence            85  5599999998643 256889999999999999999999999999999999889999999999987 4  5678899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      |++||+|+++|+++|+.|++++||+||+|+||++.||+...
T Consensus       159 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~  199 (280)
T 3tox_A          159 YAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFA  199 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhh
Confidence            99999999999999999999999999999999999999765

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.3e-39  Score=274.92  Aligned_cols=195  Identities=25%  Similarity=0.327  Sum_probs=159.6

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeC-ChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      +++||+++||||++|||+++|++|+++|++|++++| +.+.+++..+++.+.  +.++..+.+|++|  ++++.++++.+
T Consensus        26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~  103 (280)
T 4da9_A           26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL--GARVIFLRADLADLSSHQATVDAVVA  103 (280)
T ss_dssp             CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT--TCCEEEEECCTTSGGGHHHHHHHHHH
T ss_pred             ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999995 778888888888765  4568889999997  45778888888


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC---CcEEEEECCccccccCCCC
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK---KGAIVNIGSGAAIVIPSDP  203 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~---~g~iv~vsS~~~~~~~~~~  203 (255)
                      .+++  +|+||||||+......++.+.+.++|++.+++|+.|+++++++++|.|++++   .|+||++||..+..  +.+
T Consensus       104 ~~g~--iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~--~~~  179 (280)
T 4da9_A          104 EFGR--IDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVM--TSP  179 (280)
T ss_dssp             HHSC--CCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC---------
T ss_pred             HcCC--CCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhcc--CCC
Confidence            8885  5599999998433345688999999999999999999999999999998765   78999999999988  778


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      +...|++||+|+++|+++++.|++++||+||+|+||+++|++.+...
T Consensus       180 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~  226 (280)
T 4da9_A          180 ERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVS  226 (280)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcc
Confidence            89999999999999999999999999999999999999999987653

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.1e-39  Score=275.44  Aligned_cols=193  Identities=25%  Similarity=0.394  Sum_probs=168.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeC-ChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      ++++|+++||||++|||+++|++|+++|++|++++| +.+.+++..+++.+.. ..++..+.+|++|  ++++.++++.+
T Consensus        22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~  100 (281)
T 3v2h_A           22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLS-SGTVLHHPADMTKPSEIADMMAMVAD  100 (281)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTC-SSCEEEECCCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhcc-CCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence            466999999999999999999999999999999999 6677777777776543 4568889999998  35677788888


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .+++  +|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..  +.++..
T Consensus       101 ~~g~--iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~  174 (281)
T 3v2h_A          101 RFGG--ADILVNNAGVQFV--EKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLV--ASPFKS  174 (281)
T ss_dssp             HTSS--CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTCH
T ss_pred             HCCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCccccc--CCCCch
Confidence            7775  5599999998754  568899999999999999999999999999999988899999999999988  778899


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .|++||+|+++|+++++.|++++||+||+|+||+++||+.+..
T Consensus       175 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~  217 (281)
T 3v2h_A          175 AYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQ  217 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhh
Confidence            9999999999999999999999999999999999999997654

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=9.5e-40  Score=270.70  Aligned_cols=191  Identities=27%  Similarity=0.388  Sum_probs=170.8

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeC-ChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHh
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAI  128 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~  128 (255)
                      .+|+++||||++|||+++|++|+++|++|++.+| +.+.+++..+++.+.  +.++..+.+|++|  ++++.++++.+.+
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   80 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK--GVDSFAIQANVADADEVKAMIKEVVSQF   80 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5899999999999999999999999999999887 567778888887765  4567889999998  3567778888888


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++  +|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|+|++++.|+||++||..+..  +.++...|
T Consensus        81 g~--id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~Y  154 (246)
T 3osu_A           81 GS--LDVLVNNAGITRD--NLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAV--GNPGQANY  154 (246)
T ss_dssp             SC--CCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH--CCTTCHHH
T ss_pred             CC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC--CCCCChHH
Confidence            85  5599999998754  568899999999999999999999999999999988899999999999988  77889999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      ++||+|+++|+++++.|++++||+||+|+||++.|++.+.+.
T Consensus       155 ~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~  196 (246)
T 3osu_A          155 VATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALS  196 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSC
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccC
Confidence            999999999999999999999999999999999999987543

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=7e-40  Score=278.19  Aligned_cols=194  Identities=25%  Similarity=0.320  Sum_probs=174.2

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+ ..++..+.+|++|  ++++.++++.+
T Consensus        37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~  115 (293)
T 3rih_A           37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG-AGNVIGVRLDVSDPGSCADAARTVVD  115 (293)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS-SSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC-CCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999999988887653 3578899999998  35677788888


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccc-ccCCCCCc
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAI-VIPSDPLY  205 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~-~~~~~~~~  205 (255)
                      .+++  +|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+. .  +.++.
T Consensus       116 ~~g~--iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~--~~~~~  189 (293)
T 3rih_A          116 AFGA--LDVVCANAGIFPE--ARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVT--GYPGW  189 (293)
T ss_dssp             HHSC--CCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTB--BCTTC
T ss_pred             HcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccC--CCCCC
Confidence            8885  4599999998754  56889999999999999999999999999999998888999999999886 5  56788


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ..|++||+|+++|+++++.|++++||+||+|+||++.|++.+..
T Consensus       190 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~  233 (293)
T 3rih_A          190 SHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM  233 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc
Confidence            99999999999999999999999999999999999999987543

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.7e-39  Score=273.07  Aligned_cols=190  Identities=25%  Similarity=0.289  Sum_probs=163.2

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~  128 (255)
                      +++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++     ..++..+.+|++|  ++++.++++.+.+
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  100 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI-----GDDALCVPTDVTDPDSVRALFTATVEKF  100 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----TSCCEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence            56999999999999999999999999999999999999888887776     2457889999997  4577778888888


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC--CcEEEEECCccccccCCCCCch
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK--KGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~--~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      ++  +|+||||||+... ..++.+.+.++|++.+++|+.|+++++++++|.|++++  .|+||++||..+..  +.++..
T Consensus       101 g~--iD~lVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~--~~~~~~  175 (272)
T 4dyv_A          101 GR--VDVLFNNAGTGAP-AIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATS--PRPYSA  175 (272)
T ss_dssp             SC--CCEEEECCCCCCC-SSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTS--CCTTCH
T ss_pred             CC--CCEEEECCCCCCC-CCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcC--CCCCch
Confidence            85  5599999998643 24688999999999999999999999999999998876  69999999999988  778899


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      .|++||+|+++|+++++.|++++||+||+|+||+++|+|.+.+.
T Consensus       176 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~  219 (272)
T 4dyv_A          176 PYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMK  219 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC--------
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhc
Confidence            99999999999999999999999999999999999999987654

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=3.8e-39  Score=270.26  Aligned_cols=197  Identities=25%  Similarity=0.318  Sum_probs=171.5

Q ss_pred             CcccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHH
Q 025260           46 AKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVER  123 (255)
Q Consensus        46 ~~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~  123 (255)
                      ++..+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++..+.+|++|.  +++.+++
T Consensus        14 ~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~   92 (267)
T 1vl8_A           14 KEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLEA   92 (267)
T ss_dssp             ---CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHHHHH
Confidence            34455789999999999999999999999999999999999998888888773332 34678889999973  5667777


Q ss_pred             HHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcc-ccccCCC
Q 025260          124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGA-AIVIPSD  202 (255)
Q Consensus       124 ~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~-~~~~~~~  202 (255)
                      +.+.+++  +|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.. +..  +.
T Consensus        93 ~~~~~g~--iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~--~~  166 (267)
T 1vl8_A           93 VKEKFGK--LDTVVNAAGINRR--HPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV--TM  166 (267)
T ss_dssp             HHHHHSC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC--CS
T ss_pred             HHHHcCC--CCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc--CC
Confidence            8787875  5599999998753  567889999999999999999999999999999888889999999988 776  66


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ++...|++||+|+++|+++++.|++++||+||+|+||+++|+|.+..
T Consensus       167 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  213 (267)
T 1vl8_A          167 PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAV  213 (267)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHH
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccccc
Confidence            78899999999999999999999999999999999999999997654

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.1e-39  Score=276.09  Aligned_cols=195  Identities=19%  Similarity=0.267  Sum_probs=171.7

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh-------hHHHHHHHHHhhcCCceEEEEEEECCC--CcH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD-------KLKDVSDSIQAKYAKTQIKSVVVDFSG--DLD  118 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~  118 (255)
                      .++++||+++||||++|||+++|++|+++|++|++++|+.+       .+++..+++.+.  +.++..+.+|++|  +++
T Consensus         4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~   81 (285)
T 3sc4_A            4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA--GGQALPIVGDIRDGDAVA   81 (285)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH--TSEEEEEECCTTSHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHH
Confidence            45677999999999999999999999999999999999987       467777777665  4578899999998  457


Q ss_pred             HHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccc
Q 025260          119 EGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV  198 (255)
Q Consensus       119 ~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~  198 (255)
                      +.++++.+.+++  +|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||..+..
T Consensus        82 ~~~~~~~~~~g~--id~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~  157 (285)
T 3sc4_A           82 AAVAKTVEQFGG--IDICVNNASAINL--GSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLE  157 (285)
T ss_dssp             HHHHHHHHHHSC--CSEEEECCCCCCC--CCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCS
T ss_pred             HHHHHHHHHcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhcc
Confidence            778888888885  5599999999754  568899999999999999999999999999999988889999999998877


Q ss_pred             cCCC-CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeee-eeeeCCcchhh
Q 025260          199 IPSD-PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLF-LLCFYNLNDLV  250 (255)
Q Consensus       199 ~~~~-~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg-~v~T~~~~~~~  250 (255)
                        +. ++...|++||+|+++|+++|+.|++++||+||+|+|| .+.|++.++..
T Consensus       158 --~~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~  209 (285)
T 3sc4_A          158 --PKWLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLL  209 (285)
T ss_dssp             --GGGSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHH
T ss_pred             --CCCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhc
Confidence              43 6678999999999999999999999999999999999 79999887654

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=1.7e-39  Score=270.86  Aligned_cols=190  Identities=26%  Similarity=0.308  Sum_probs=169.1

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~  128 (255)
                      ++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.  +.++..+.+|++|  ++++.++++.+.+
T Consensus         4 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (257)
T 3imf_A            4 MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF--PGQILTVQMDVRNTDDIQKMIEQIDEKF   81 (257)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS--TTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            56999999999999999999999999999999999999999988887654  3468889999998  4577778888888


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhh-CCCcEEEEECCccccccCCCCCchh
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK-RKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~-~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++  +|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|+|++ ++.|+||++||..+..  +.++...
T Consensus        82 g~--id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~  155 (257)
T 3imf_A           82 GR--IDILINNAAGNFI--CPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWD--AGPGVIH  155 (257)
T ss_dssp             SC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGS--CCTTCHH
T ss_pred             CC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhcc--CCCCcHH
Confidence            85  5599999998754  56889999999999999999999999999999954 4579999999999988  7788999


Q ss_pred             chHHHHHHHHHHHHHHHHHc-cCCceEEEeeeeeeeeCCcch
Q 025260          208 YAATKAYIDQFSRSLYVEYR-KSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~-~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      |++||+|+++|+++|+.|++ ++||+||+|+||++.|++...
T Consensus       156 Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~  197 (257)
T 3imf_A          156 SAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGAD  197 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-
T ss_pred             HHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchh
Confidence            99999999999999999997 779999999999999997543

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=2.4e-39  Score=270.27  Aligned_cols=189  Identities=24%  Similarity=0.334  Sum_probs=169.6

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++     ......+.+|++|.  +++.++++.+.
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~   79 (259)
T 4e6p_A            5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-----GPAAYAVQMDVTRQDSIDAAIAATVEH   79 (259)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            356999999999999999999999999999999999999888877776     33578899999983  56677778887


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCch
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      +++  +|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|.|++++ +|+||++||..+..  +.++..
T Consensus        80 ~g~--id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~  153 (259)
T 4e6p_A           80 AGG--LDILVNNAALFDL--APIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRR--GEALVA  153 (259)
T ss_dssp             SSS--CCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--CCTTBH
T ss_pred             cCC--CCEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhcc--CCCCCh
Confidence            775  5599999998754  5688999999999999999999999999999998766 79999999999988  778899


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .|++||+|+++|+++++.|++++||+||+|+||++.||+.+..
T Consensus       154 ~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~  196 (259)
T 4e6p_A          154 IYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGV  196 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhh
Confidence            9999999999999999999999999999999999999997765

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=2e-39  Score=271.79  Aligned_cols=195  Identities=23%  Similarity=0.266  Sum_probs=172.9

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      .+++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+..++.++..+.+|++|.  +++.++++.+
T Consensus         9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   88 (267)
T 1iy8_A            9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   88 (267)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            34679999999999999999999999999999999999999888888887664455788899999983  5667777878


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .+++  +|+||||||+... ..++.+.+.++|++++++|+.|++.+++.++|.|++++.|+||++||..+..  +.++..
T Consensus        89 ~~g~--id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~  163 (267)
T 1iy8_A           89 RFGR--IDGFFNNAGIEGK-QNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR--GIGNQS  163 (267)
T ss_dssp             HHSC--CSEEEECCCCCCC-CBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS--BCSSBH
T ss_pred             HcCC--CCEEEECCCcCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcc--CCCCCc
Confidence            7875  5599999998643 1457889999999999999999999999999999888889999999999887  678889


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      .|++||+|+++|+++++.|++++||+||+|+||++.|++.+.
T Consensus       164 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  205 (267)
T 1iy8_A          164 GYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVEN  205 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhc
Confidence            999999999999999999999999999999999999998765

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=4.1e-40  Score=277.26  Aligned_cols=192  Identities=26%  Similarity=0.294  Sum_probs=171.5

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      ++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.  +.++..+.+|++|.  +++.++++.+
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS--GGTAQELAGDLSEAGAGTDLIERAEA  106 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT--TCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999999988888765  45678899999974  4556666665


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      . +  ++|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..  +.+...
T Consensus       107 ~-g--~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~--~~~~~~  179 (275)
T 4imr_A          107 I-A--PVDILVINASAQIN--ATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLR--PKSVVT  179 (275)
T ss_dssp             H-S--CCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTBH
T ss_pred             h-C--CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC--CCCCch
Confidence            5 4  56699999998754  568899999999999999999999999999999988889999999999988  667788


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .|++||+|+++|+++++.|++++||+||+|+||+++|++.+..
T Consensus       180 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  222 (275)
T 4imr_A          180 AYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADR  222 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccc
Confidence            8999999999999999999999999999999999999987654

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=1.4e-39  Score=274.35  Aligned_cols=189  Identities=18%  Similarity=0.221  Sum_probs=171.7

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      ++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++..+.+|++|.  +++.++++.+.+
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  103 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT-GRRCLPLSMDVRAPPAVMAAVDQALKEF  103 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            679999999999999999999999999999999999999998888887654 45688999999983  567778888888


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++  +|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||..+..  +.++...|
T Consensus       104 g~--id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~Y  177 (277)
T 4fc7_A          104 GR--IDILINCAAGNFL--CPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNR--GQALQVHA  177 (277)
T ss_dssp             SC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHH--TCTTCHHH
T ss_pred             CC--CCEEEECCcCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC--CCCCcHHH
Confidence            85  5599999998754  568899999999999999999999999999999888889999999999988  77889999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                      ++||+|+++|+++++.|++++||+||+|+||++.|++.
T Consensus       178 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~  215 (277)
T 4fc7_A          178 GSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEG  215 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchh
Confidence            99999999999999999999999999999999999864

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=1.4e-39  Score=273.79  Aligned_cols=195  Identities=18%  Similarity=0.265  Sum_probs=165.8

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhh-------HHHHHHHHHhhcCCceEEEEEEECCC--CcHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK-------LKDVSDSIQAKYAKTQIKSVVVDFSG--DLDE  119 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~  119 (255)
                      ++++||+++||||++|||+++|++|+++|++|++++|+.++       +++..+++.+.  +.++..+.+|++|  ++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~   79 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA--GGQGLALKCDIREEDQVRA   79 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH--TSEEEEEECCTTCHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHH
Confidence            45679999999999999999999999999999999999764       56666666655  4578899999998  3567


Q ss_pred             HHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc
Q 025260          120 GVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI  199 (255)
Q Consensus       120 ~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~  199 (255)
                      .++++.+.+++  +|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+...
T Consensus        80 ~~~~~~~~~g~--iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~  155 (274)
T 3e03_A           80 AVAATVDTFGG--IDILVNNASAIWL--RGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNP  155 (274)
T ss_dssp             HHHHHHHHHSC--CCEEEECCCCCCC--CCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCH
T ss_pred             HHHHHHHHcCC--CCEEEECCCcccC--CCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCC
Confidence            77888888885  5599999999754  5688899999999999999999999999999999888899999999988772


Q ss_pred             CCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeee-eeeeCCcchh
Q 025260          200 PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLF-LLCFYNLNDL  249 (255)
Q Consensus       200 ~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg-~v~T~~~~~~  249 (255)
                      ...++...|++||+|+++|+++++.|++++||+||+|+|| .++|+|.+..
T Consensus       156 ~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~  206 (274)
T 3e03_A          156 AWWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINML  206 (274)
T ss_dssp             HHHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC------
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhc
Confidence            1146678999999999999999999999999999999999 6999988543

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=3.2e-39  Score=275.20  Aligned_cols=192  Identities=22%  Similarity=0.295  Sum_probs=174.3

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~  128 (255)
                      ++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++..+.+|++|  ++++.++++.+.+
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  106 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ--GFDAHGVVCDVRHLDEMVRLADEAFRLL  106 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHhC
Confidence            67999999999999999999999999999999999999999999888765  4568889999998  3566777788877


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCchh
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++  +|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|.|++++ .|+||++||..+..  +.++...
T Consensus       107 g~--id~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~  180 (301)
T 3tjr_A          107 GG--VDVVFSNAGIVVA--GPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLV--PNAGLGT  180 (301)
T ss_dssp             SS--CSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS--CCTTBHH
T ss_pred             CC--CCEEEECCCcCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC--CCCCchH
Confidence            75  5599999999854  5688999999999999999999999999999998876 79999999999998  7788999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      |++||+|+++|+++|+.|+++.||+|++|+||+++|++.++..
T Consensus       181 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~  223 (301)
T 3tjr_A          181 YGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSE  223 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccc
Confidence            9999999999999999999999999999999999999987643

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=2.2e-39  Score=269.92  Aligned_cols=186  Identities=23%  Similarity=0.283  Sum_probs=166.9

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++..+.+|++|  ++++.++++.+.
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIADLNEIAVLGAAAGQT   79 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHH
Confidence            356999999999999999999999999999999999999888877765     3468889999998  356677778787


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|+|++  +|+||++||.++..  +.++...
T Consensus        80 ~g~--id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~--~~~~~~~  151 (255)
T 4eso_A           80 LGA--IDLLHINAGVSEL--EPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE--GGSIVFTSSVADEG--GHPGMSV  151 (255)
T ss_dssp             HSS--EEEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCGGGSS--BCTTBHH
T ss_pred             hCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--CCEEEEECChhhcC--CCCCchH
Confidence            774  6699999999754  56889999999999999999999999999999855  58999999999988  7788999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      |++||+|+++|+++|+.|++++||+||+|+||+++||+.+.
T Consensus       152 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  192 (255)
T 4eso_A          152 YSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGV  192 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCccccc
Confidence            99999999999999999999999999999999999998753

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-39  Score=267.45  Aligned_cols=193  Identities=24%  Similarity=0.338  Sum_probs=173.3

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++++.  +.++..+.+|++|.  +++.++++.+.
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK--GFKARGLVLNISDIESIQNFFAEIKAE   79 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            456999999999999999999999999999999999999999988888765  35688899999973  46666777776


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|++|||||+...  .++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..  +.++...
T Consensus        80 ~~~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~  153 (247)
T 3lyl_A           80 NLA--IDILVNNAGITRD--NLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSA--GNPGQTN  153 (247)
T ss_dssp             TCC--CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH--CCTTCHH
T ss_pred             cCC--CCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc--CCCCcHH
Confidence            664  6699999998754  567889999999999999999999999999999988889999999999988  7788999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      |++||+|+++|+++++.|++++||+||+++||++.|++.+...
T Consensus       154 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~  196 (247)
T 3lyl_A          154 YCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLT  196 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhcc
Confidence            9999999999999999999999999999999999999987653

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=2.7e-39  Score=267.78  Aligned_cols=195  Identities=21%  Similarity=0.238  Sum_probs=169.7

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEEC--CC--CcHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF--SG--DLDEGVERI  124 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~--~~--~~~~~~~~~  124 (255)
                      ..++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.+ ......+.+|+  ++  ++++.++++
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~d~d~~~~~~~~~~~~~~   88 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG-QPQPLIIALNLENATAQQYRELAARV   88 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-SCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC-CCCceEEEeccccCCHHHHHHHHHHH
Confidence            34679999999999999999999999999999999999999999999988765 23344555555  65  346667777


Q ss_pred             HHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                      .+.+++  +|+||||||+... ..++.+.+.++|++.+++|+.|++.++++++|+|++++.|+||++||..+..  +.++
T Consensus        89 ~~~~g~--id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~  163 (247)
T 3i1j_A           89 EHEFGR--LDGLLHNASIIGP-RTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRK--GRAN  163 (247)
T ss_dssp             HHHHSC--CSEEEECCCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTS--CCTT
T ss_pred             HHhCCC--CCEEEECCccCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcC--CCCC
Confidence            777775  5599999998643 3568899999999999999999999999999999888889999999999988  7788


Q ss_pred             chhchHHHHHHHHHHHHHHHHHcc-CCceEEEeeeeeeeeCCcchh
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRK-SGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~-~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ...|++||+|+++|+++|+.|+.+ .||+||+|+||+++|+|.++.
T Consensus       164 ~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~  209 (247)
T 3i1j_A          164 WGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQA  209 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhc
Confidence            999999999999999999999976 799999999999999987654

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=7.6e-39  Score=269.21  Aligned_cols=193  Identities=22%  Similarity=0.315  Sum_probs=167.0

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK  125 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~  125 (255)
                      .++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.  +.++..+.+|++|.  +++.++++.
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   93 (273)
T 1ae1_A           16 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSRTERDKLMQTVA   93 (273)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHH
Confidence            34577999999999999999999999999999999999999888888887664  34678899999973  466667777


Q ss_pred             HHh-cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          126 EAI-EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       126 ~~~-~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                      +.+ +  ++|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..  +.++
T Consensus        94 ~~~~g--~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~--~~~~  167 (273)
T 1ae1_A           94 HVFDG--KLNILVNNAGVVIH--KEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS--ALPS  167 (273)
T ss_dssp             HHTTS--CCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTS--CCTT
T ss_pred             HHcCC--CCcEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcC--CCCC
Confidence            777 5  46699999998743  567889999999999999999999999999999888889999999999988  6788


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ...|++||+|+++|+++++.|++++||+||+|+||++.||+.+.
T Consensus       168 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  211 (273)
T 1ae1_A          168 VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVET  211 (273)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhh
Confidence            89999999999999999999999999999999999999999764

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=7.8e-39  Score=269.19  Aligned_cols=192  Identities=27%  Similarity=0.328  Sum_probs=166.6

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK  125 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~  125 (255)
                      .++++||+++||||++|||+++|++|+++|++|++++|+ +..++..+++.+.  +.++..+.+|++|.  +++. .+..
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~-~~~~  101 (273)
T 3uf0_A           26 PFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG--GGSAEAVVADLADLEGAANV-AEEL  101 (273)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTT--TCEEEEEECCTTCHHHHHHH-HHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHH-HHHH
Confidence            346789999999999999999999999999999999976 5566677777654  45688899999984  2333 3333


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCc
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~  205 (255)
                      +.++  ++|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..  +.++.
T Consensus       102 ~~~g--~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~--~~~~~  175 (273)
T 3uf0_A          102 AATR--RVDVLVNNAGIIAR--APAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQ--GGRNV  175 (273)
T ss_dssp             HHHS--CCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCSSC
T ss_pred             HhcC--CCcEEEECCCCCCC--CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcC--CCCCC
Confidence            3445  46699999999754  568899999999999999999999999999999988899999999999988  77889


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ..|++||+|+++|+++++.|++++||+||+|+||++.|++.+..
T Consensus       176 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  219 (273)
T 3uf0_A          176 AAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAAL  219 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhc
Confidence            99999999999999999999999999999999999999998765

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=5.6e-39  Score=266.01  Aligned_cols=191  Identities=27%  Similarity=0.358  Sum_probs=170.0

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeC-ChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      ++||+++||||++|||+++|++|+++|++|++++| +++++++..+++.+.  +.++..+.+|++|.  +++.++++.+.
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL--GSDAIAVRADVANAEDVTNMVKQTVDV   79 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45899999999999999999999999999999999 888888888887664  34578889999973  56777778888


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|+||||||+...  .++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..  +.++...
T Consensus        80 ~g~--id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~  153 (246)
T 2uvd_A           80 FGQ--VDILVNNAGVTKD--NLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVT--GNPGQAN  153 (246)
T ss_dssp             HSC--CCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH--CCTTBHH
T ss_pred             cCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcC--CCCCCch
Confidence            875  5599999998753  567889999999999999999999999999999888889999999999887  6788899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |++||+|+.+|+++++.|+.++||+||+|+||+++|++.+..
T Consensus       154 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  195 (246)
T 2uvd_A          154 YVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVL  195 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhc
Confidence            999999999999999999999999999999999999997653

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=1.5e-38  Score=265.90  Aligned_cols=193  Identities=26%  Similarity=0.282  Sum_probs=167.2

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~  128 (255)
                      ++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++..+.+|++|  ++++.++++.+.+
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~  104 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA--GGEAESHACDLSHSDAIAAFATGVLAAH  104 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh--CCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence            67999999999999999999999999999999999999999998888765  4568889999997  3567778888888


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++  +|+||||||+... ..++.+.+.++|++.+++|+.|++++++.++|.|++++.|+||++||..+..  +.++...|
T Consensus       105 g~--id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~Y  179 (262)
T 3rkr_A          105 GR--CDVLVNNAGVGWF-GGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKN--PVADGAAY  179 (262)
T ss_dssp             SC--CSEEEECCCCCCC-SSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSC--CCTTCHHH
T ss_pred             CC--CCEEEECCCccCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcC--CCCCCchH
Confidence            85  5599999998432 2567889999999999999999999999999999988899999999999988  77889999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      ++||+|+++|+++++.|++++||+|++|+||+++|+|.+...
T Consensus       180 ~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~  221 (262)
T 3rkr_A          180 TASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS  221 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc
Confidence            999999999999999999999999999999999999987654

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=9.2e-39  Score=266.79  Aligned_cols=193  Identities=24%  Similarity=0.310  Sum_probs=171.5

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK  125 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~  125 (255)
                      .++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.  +.++..+.+|++|.  +++.++++.
T Consensus         4 ~~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   81 (260)
T 2ae2_A            4 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTVA   81 (260)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            34567999999999999999999999999999999999999888888887654  34678899999973  466677777


Q ss_pred             HHh-cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          126 EAI-EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       126 ~~~-~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                      +.+ +  ++|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..  +.++
T Consensus        82 ~~~~g--~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~  155 (260)
T 2ae2_A           82 NHFHG--KLNILVNNAGIVIY--KEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL--AVPY  155 (260)
T ss_dssp             HHTTT--CCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS--CCTT
T ss_pred             HHcCC--CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc--CCCC
Confidence            777 5  46699999998743  557889999999999999999999999999999888889999999999887  6788


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ...|++||+|+++|+++++.|++++||+||+|+||++.|++.+.
T Consensus       156 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  199 (260)
T 2ae2_A          156 EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEM  199 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhh
Confidence            89999999999999999999999999999999999999998654

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.3e-39  Score=269.03  Aligned_cols=193  Identities=19%  Similarity=0.167  Sum_probs=155.9

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      ++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++..+.+|++|  ++++.++++.+
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   77 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-----GAAVRFRNADVTNEADATAALAFAKQ   77 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3467999999999999999999999999999999999998888777665     3356788999998  35777788888


Q ss_pred             HhcCCCccEEEEecCCCCCcc--cccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC------CCcEEEEECCccccc
Q 025260          127 AIEGLDVGVLINNVGISYPYA--RFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR------KKGAIVNIGSGAAIV  198 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~------~~g~iv~vsS~~~~~  198 (255)
                      .+++  +|+||||||+.....  ....+.+.++|++.+++|+.|+++++++++|.|+++      +.|+||++||..+..
T Consensus        78 ~~g~--id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~  155 (257)
T 3tpc_A           78 EFGH--VHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFD  155 (257)
T ss_dssp             HHSC--CCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH
T ss_pred             HcCC--CCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhcc
Confidence            8885  559999999875421  112367899999999999999999999999999875      579999999999988


Q ss_pred             cCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          199 IPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       199 ~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                        +.++...|++||+|+++|+++++.|++++||+||+|+||++.|++.+...
T Consensus       156 --~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~  205 (257)
T 3tpc_A          156 --GQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMP  205 (257)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC------
T ss_pred             --CCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCC
Confidence              77889999999999999999999999999999999999999999986543

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=3.7e-39  Score=270.21  Aligned_cols=187  Identities=24%  Similarity=0.295  Sum_probs=165.7

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      .+.+|+++||||++|||+++|++|+++|++|++++|+.+++++..        ......+.+|++|  ++++.++++.+.
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~~~~~~~   84 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN--------LPNTLCAQVDVTDKYTFDTAITRAEKI   84 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC--------CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh--------cCCceEEEecCCCHHHHHHHHHHHHHH
Confidence            466999999999999999999999999999999999987665431        2367889999998  356777788888


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++  ++|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++..  +.++...
T Consensus        85 ~g--~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~--~~~~~~~  158 (266)
T 3p19_A           85 YG--PADAIVNNAGMMLL--GQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKK--TFPDHAA  158 (266)
T ss_dssp             HC--SEEEEEECCCCCCC--CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS--CCTTCHH
T ss_pred             CC--CCCEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCC--CCCCCch
Confidence            87  46699999999754  568899999999999999999999999999999988889999999999988  7788999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      |++||+|+++|+++|+.|++++||+||+|+||+++|++.+...
T Consensus       159 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~  201 (266)
T 3p19_A          159 YCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTT  201 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCS
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhccc
Confidence            9999999999999999999999999999999999999987643

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=7.4e-39  Score=268.95  Aligned_cols=199  Identities=20%  Similarity=0.228  Sum_probs=168.2

Q ss_pred             cCCcccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeC-ChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHH
Q 025260           44 RPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEG  120 (255)
Q Consensus        44 ~~~~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~  120 (255)
                      .....++++||+++||||++|||+++|++|+++|++|++++| +++..++..+++.+.  +.++..+.+|++|.  +++.
T Consensus        20 ~~~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~   97 (271)
T 4iin_A           20 FQSNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK--GYKAAVIKFDAASESDFIEA   97 (271)
T ss_dssp             ----CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHH
T ss_pred             hhhhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHH
Confidence            334466788999999999999999999999999999999999 455566666666554  45688899999983  5667


Q ss_pred             HHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC
Q 025260          121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP  200 (255)
Q Consensus       121 ~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~  200 (255)
                      ++++.+.+++  +|+||||||+...  .++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..  
T Consensus        98 ~~~~~~~~g~--id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--  171 (271)
T 4iin_A           98 IQTIVQSDGG--LSYLVNNAGVVRD--KLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGER--  171 (271)
T ss_dssp             HHHHHHHHSS--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH--
T ss_pred             HHHHHHhcCC--CCEEEECCCcCCC--cccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcC--
Confidence            7777777775  5599999999764  567789999999999999999999999999999988889999999999988  


Q ss_pred             CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          201 SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       201 ~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      +.++...|++||+|+++|+++++.|++++||+||+|+||+++|++.+...
T Consensus       172 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~  221 (271)
T 4iin_A          172 GNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLK  221 (271)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------
T ss_pred             CCCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhc
Confidence            77889999999999999999999999999999999999999999987654

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=7.9e-39  Score=274.86  Aligned_cols=194  Identities=23%  Similarity=0.293  Sum_probs=169.7

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+.+..+..+.+|++|.  ++++++.+.+.
T Consensus         5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (319)
T 3ioy_A            5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR   84 (319)
T ss_dssp             CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            3569999999999999999999999999999999999999999999988776556899999999983  46677777777


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC------CCcEEEEECCccccccCC
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR------KKGAIVNIGSGAAIVIPS  201 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~------~~g~iv~vsS~~~~~~~~  201 (255)
                      ++  ++|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|+++      +.|+||++||.++..  +
T Consensus        85 ~g--~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~--~  158 (319)
T 3ioy_A           85 FG--PVSILCNNAGVNLF--QPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFL--A  158 (319)
T ss_dssp             TC--CEEEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTC--C
T ss_pred             CC--CCCEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccccccc--C
Confidence            76  56799999998754  568899999999999999999999999999999875      579999999999998  7


Q ss_pred             CCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       202 ~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .++...|++||+|+++|+++|+.|+.+.||+|++|+||+|.|++.+..
T Consensus       159 ~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  206 (319)
T 3ioy_A          159 AGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASD  206 (319)
T ss_dssp             CSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-------
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCccccc
Confidence            788999999999999999999999999999999999999999998754

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=1.2e-38  Score=266.12  Aligned_cols=192  Identities=26%  Similarity=0.340  Sum_probs=162.0

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIK  125 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~  125 (255)
                      .++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++..+.+|++|  ++++.++++.
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~   78 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-----GDAALAVAADISKEADVDAAVEAAL   78 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHH
Confidence            46678999999999999999999999999999999999999888877765     3467889999998  3567778888


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC----CcEEEEECCccccccCC
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK----KGAIVNIGSGAAIVIPS  201 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~----~g~iv~vsS~~~~~~~~  201 (255)
                      +.+++  +|+||||||+... ..++.+.+.++|++.+++|+.++++++++++|.|++++    .|+||++||..+..  +
T Consensus        79 ~~~g~--id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--~  153 (261)
T 3n74_A           79 SKFGK--VDILVNNAGIGHK-PQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGR--P  153 (261)
T ss_dssp             HHHSC--CCEEEECCCCCCC-SCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTS--C
T ss_pred             HhcCC--CCEEEECCccCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcC--C
Confidence            88875  5599999998753 35577889999999999999999999999999998764    67999999999988  7


Q ss_pred             CCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       202 ~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .+....|++||+|+++|+++|+.|++++||+||+++||+++|++.+.+
T Consensus       154 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  201 (261)
T 3n74_A          154 RPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTF  201 (261)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhh
Confidence            788999999999999999999999999999999999999999998765

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=9.1e-39  Score=274.25  Aligned_cols=190  Identities=24%  Similarity=0.333  Sum_probs=169.5

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCC------------hhhHHHHHHHHHhhcCCceEEEEEEECCC--
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN------------PDKLKDVSDSIQAKYAKTQIKSVVVDFSG--  115 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--  115 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+            .+++++..+++.+.  +.++..+.+|++|  
T Consensus        43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~  120 (317)
T 3oec_A           43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ--GRRIIARQADVRDLA  120 (317)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCCCHH
Confidence            3679999999999999999999999999999999886            66677777777654  4568899999998  


Q ss_pred             CcHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCc
Q 025260          116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSG  194 (255)
Q Consensus       116 ~~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~  194 (255)
                      ++++.++++.+.+++  +|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|++++ .|+||++||.
T Consensus       121 ~v~~~~~~~~~~~g~--iD~lVnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~  196 (317)
T 3oec_A          121 SLQAVVDEALAEFGH--IDILVSNVGISNQ--GEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSST  196 (317)
T ss_dssp             HHHHHHHHHHHHHSC--CCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCG
T ss_pred             HHHHHHHHHHHHcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcH
Confidence            457777888888885  5599999998754  5688999999999999999999999999999998875 6999999999


Q ss_pred             cccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          195 AAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       195 ~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      .+..  +.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++..
T Consensus       197 ~~~~--~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  247 (317)
T 3oec_A          197 VGLR--GAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMAL  247 (317)
T ss_dssp             GGSS--CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHH
T ss_pred             HhcC--CCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCcccc
Confidence            9988  77889999999999999999999999999999999999999999864

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=4.2e-39  Score=268.64  Aligned_cols=196  Identities=21%  Similarity=0.217  Sum_probs=168.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHH---cCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAK---TGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI  124 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~---~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~  124 (255)
                      +++||+++||||++|||+++|++|++   +|++|++++|+++++++..+++.+.+++.++..+.+|++|.  +++.++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence            35699999999999999999999999   89999999999999999888887765556788999999984  34555555


Q ss_pred             HH--HhcCCCccEEEEecCCCCCccccccc-CCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC--CCcEEEEECCcccccc
Q 025260          125 KE--AIEGLDVGVLINNVGISYPYARFFHE-VDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR--KKGAIVNIGSGAAIVI  199 (255)
Q Consensus       125 ~~--~~~~~~id~lv~nag~~~~~~~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~--~~g~iv~vsS~~~~~~  199 (255)
                      .+  .++++|+|+||||||+......++.+ .+.++|++++++|+.|+++++++++|.|+++  +.|+||++||..+.. 
T Consensus        83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~-  161 (259)
T 1oaa_A           83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ-  161 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS-
T ss_pred             HhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC-
Confidence            55  33444555999999986432234667 7899999999999999999999999999877  579999999999988 


Q ss_pred             CCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          200 PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       200 ~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                       +.++...|++||+|+++|+++++.|+.  +|+||+|+||+++|+|.+..
T Consensus       162 -~~~~~~~Y~asKaa~~~~~~~la~e~~--~i~vn~v~PG~v~T~~~~~~  208 (259)
T 1oaa_A          162 -PYKGWGLYCAGKAARDMLYQVLAAEEP--SVRVLSYAPGPLDNDMQQLA  208 (259)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHCT--TEEEEEEECCSBSSHHHHHH
T ss_pred             -CCCCccHHHHHHHHHHHHHHHHHhhCC--CceEEEecCCCcCcchHHHH
Confidence             778899999999999999999999996  39999999999999997654

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=9.4e-39  Score=266.72  Aligned_cols=192  Identities=24%  Similarity=0.300  Sum_probs=165.7

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhh-HHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK-LKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      ++||+++||||++|||+++|++|+++|++|++++|++++ +++..+++.+.. +.++..+.+|++|.  +++.++++.+.
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~   80 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhcc-CCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            458999999999999999999999999999999999887 888877776542 23577889999973  56677777787


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..  +.++...
T Consensus        81 ~g~--iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~  154 (260)
T 1x1t_A           81 MGR--IDILVNNAGIQHT--ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLV--ASANKSA  154 (260)
T ss_dssp             HSC--CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTCHH
T ss_pred             cCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCc--CCCCCch
Confidence            875  5599999998653  567889999999999999999999999999999888889999999999987  6788899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |++||+|+++|+++++.|++++||+||+|+||+++||+.+..
T Consensus       155 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  196 (260)
T 1x1t_A          155 YVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQ  196 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHh
Confidence            999999999999999999999999999999999999997653

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=1.3e-38  Score=266.19  Aligned_cols=194  Identities=28%  Similarity=0.393  Sum_probs=171.8

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      ++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.. +.++..+.+|++|.  +++.++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF-GVRVLEVAVDVATPEGVDAVVESVRS   81 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            44679999999999999999999999999999999999998888888876642 23578889999973  5667777777


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .+++  +|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..  +.++..
T Consensus        82 ~~g~--id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~  155 (263)
T 3ai3_A           82 SFGG--ADILVNNAGTGSN--ETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQ--PLWYEP  155 (263)
T ss_dssp             HHSS--CSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTCH
T ss_pred             HcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC--CCCCcc
Confidence            7775  5599999998753  567889999999999999999999999999999888889999999999988  678889


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .|++||+|+++|+++++.|++++||+||+|+||++.||+.+..
T Consensus       156 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  198 (263)
T 3ai3_A          156 IYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKT  198 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhh
Confidence            9999999999999999999999999999999999999986643

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=9.4e-39  Score=267.06  Aligned_cols=191  Identities=23%  Similarity=0.284  Sum_probs=170.1

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      ++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++..+.+|++|.  +++.++++.+.+
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (262)
T 1zem_A            5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVRDF   82 (262)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            56999999999999999999999999999999999999888888888654  34678899999973  466777788878


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++  +|+||||||+... ..++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..  +.++...|
T Consensus        83 g~--id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~Y  157 (262)
T 1zem_A           83 GK--IDFLFNNAGYQGA-FAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK--GPPNMAAY  157 (262)
T ss_dssp             SC--CCEEEECCCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS--CCTTBHHH
T ss_pred             CC--CCEEEECCCCCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc--CCCCCchH
Confidence            75  5599999998622 2567889999999999999999999999999999888889999999999887  67888999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++||+|+.+|+++++.|++++||+||+|+||++.|+|.+.
T Consensus       158 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  197 (262)
T 1zem_A          158 GTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWE  197 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhh
Confidence            9999999999999999999999999999999999998754

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=2.9e-38  Score=264.52  Aligned_cols=193  Identities=21%  Similarity=0.231  Sum_probs=169.5

Q ss_pred             ccCCcEEEEECCC-CchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           50 RKYGSWALVTGPT-DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        50 ~~~gk~vlITGas-~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      .++||+++||||+ +|||+++|++|+++|++|++++|+.+++++..+++.+.+ ..++..+.+|++|  ++++.++++.+
T Consensus        19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (266)
T 3o38_A           19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALITQTVE   97 (266)
T ss_dssp             TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            3679999999998 599999999999999999999999999999998887654 4578999999998  45677788888


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECCccccccCCCCCc
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS~~~~~~~~~~~~  205 (255)
                      .+++  +|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|+++ +.|+||++||..+..  +.++.
T Consensus        98 ~~g~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~  171 (266)
T 3o38_A           98 KAGR--LDVLVNNAGLGGQ--TPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR--AQHSQ  171 (266)
T ss_dssp             HHSC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTC--CCTTC
T ss_pred             HhCC--CcEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcC--CCCCC
Confidence            8875  5599999998754  568899999999999999999999999999999877 678999999999988  77889


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ..|++||+|+++|+++++.|+.++||+||+|+||+++|++.+..
T Consensus       172 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  215 (266)
T 3o38_A          172 SHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKT  215 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhcc
Confidence            99999999999999999999999999999999999999998764

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.5e-38  Score=267.87  Aligned_cols=189  Identities=21%  Similarity=0.257  Sum_probs=164.5

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCC------------hhhHHHHHHHHHhhcCCceEEEEEEECCC
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN------------PDKLKDVSDSIQAKYAKTQIKSVVVDFSG  115 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  115 (255)
                      ..+++||+++||||++|||+++|++|+++|++|++++|+            .+++++..+++.+.  +.++..+.+|++|
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~   85 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI--GSRIVARQADVRD   85 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH--TCCEEEEECCTTC
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc--CCeEEEEeCCCCC
Confidence            345779999999999999999999999999999999987            67777777777665  3568899999998


Q ss_pred             --CcHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEEC
Q 025260          116 --DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIG  192 (255)
Q Consensus       116 --~~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vs  192 (255)
                        ++++.++++.+.+++  +|+||||||+...      ..+.++|++++++|+.|+++++++++|+|++++ .|+||++|
T Consensus        86 ~~~v~~~~~~~~~~~g~--id~lv~nAg~~~~------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~is  157 (278)
T 3sx2_A           86 RESLSAALQAGLDELGR--LDIVVANAGIAPM------SAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLIS  157 (278)
T ss_dssp             HHHHHHHHHHHHHHHCC--CCEEEECCCCCCC------SSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHcCC--CCEEEECCCCCCC------CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEc
Confidence              356777888888885  5599999998643      125789999999999999999999999998765 79999999


Q ss_pred             CccccccCCC----CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          193 SGAAIVIPSD----PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       193 S~~~~~~~~~----~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      |.++..  +.    ++...|++||+|+++|+++|+.|++++||+||+|+||+|+|||.+.
T Consensus       158 S~~~~~--~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  215 (278)
T 3sx2_A          158 SSAGLA--GVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINN  215 (278)
T ss_dssp             CGGGTS--CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSS
T ss_pred             cHHhcC--CCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchh
Confidence            999887  44    6678999999999999999999999999999999999999999874

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=2.2e-38  Score=266.01  Aligned_cols=189  Identities=20%  Similarity=0.257  Sum_probs=166.3

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeC-ChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      +++||+++||||++|||+++|++|+++|++|+++++ +.+.+++..+++.+.  +.++..+.+|++|  ++++.++++.+
T Consensus        15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   92 (270)
T 3is3_A           15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL--GSDAIAIKADIRQVPEIVKLFDQAVA   92 (270)
T ss_dssp             CCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999775 566677777877765  4567889999998  45777788888


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcc-ccccCCCCCc
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGA-AIVIPSDPLY  205 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~-~~~~~~~~~~  205 (255)
                      .+++  +|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|+|++  +|+||++||.. +..  +.++.
T Consensus        93 ~~g~--id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~--~~~~~  164 (270)
T 3is3_A           93 HFGH--LDIAVSNSGVVSF--GHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTSKDF--SVPKH  164 (270)
T ss_dssp             HHSC--CCEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTTTTC--CCTTC
T ss_pred             HcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchhccC--CCCCC
Confidence            8885  5599999999754  56889999999999999999999999999999965  68999999988 444  56788


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ..|++||+|+++|+++|+.|++++||+||+|+||+++|+|.++
T Consensus       165 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  207 (270)
T 3is3_A          165 SLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHE  207 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhh
Confidence            9999999999999999999999999999999999999999864

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=1.6e-38  Score=265.08  Aligned_cols=188  Identities=25%  Similarity=0.291  Sum_probs=168.0

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhh--HHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK--LKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      ||+++||||++|||+++|++|+++|++|++++|+.++  +++..+++.+.  +.++..+.+|++|.  +++.++++.+.+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA--DQKAVFVGLDVTDKANFDSAIDEAAEKL   79 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            7999999999999999999999999999999999887  77777777654  34678899999973  566778888888


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCC-cEEEEECCccccccCCCCCchh
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~-g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++  +|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++. |+||++||..+..  +.++...
T Consensus        80 g~--iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~  153 (258)
T 3a28_C           80 GG--FDVLVNNAGIAQI--KPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQ--GFPILSA  153 (258)
T ss_dssp             TC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTS--CCTTCHH
T ss_pred             CC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhcc--CCCCchh
Confidence            75  5599999998754  56788999999999999999999999999999988776 9999999999887  6788899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      |++||+|+++|+++++.|++++||+||+|+||+++|+|.+.
T Consensus       154 Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~  194 (258)
T 3a28_C          154 YSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQ  194 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhh
Confidence            99999999999999999999999999999999999998765

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=1.9e-38  Score=264.84  Aligned_cols=192  Identities=21%  Similarity=0.261  Sum_probs=168.9

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      ++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+..+..++..+.+|++|.  +++.++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            34679999999999999999999999999999999999998888888876543233678899999974  3555566665


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .++   +|+||||||+...  .++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..  +.++..
T Consensus        83 ~~g---id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~  155 (260)
T 2z1n_A           83 LGG---ADILVYSTGGPRP--GRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLR--PWQDLA  155 (260)
T ss_dssp             TTC---CSEEEECCCCCCC--BCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTBH
T ss_pred             hcC---CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcC--CCCCCc
Confidence            555   6699999998643  567889999999999999999999999999999888889999999999988  678889


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      .|++||+|+++|+++++.|++++||+||+|+||++.||+.+
T Consensus       156 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  196 (260)
T 2z1n_A          156 LSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVR  196 (260)
T ss_dssp             HHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhh
Confidence            99999999999999999999999999999999999999976

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=2.6e-38  Score=262.52  Aligned_cols=186  Identities=24%  Similarity=0.323  Sum_probs=158.9

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh-hhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      ++||+++||||++|||+++|++|+++|++|++++|++ +++++   ++.+.  +.++..+.+|++|.  +++.++++.+.
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (249)
T 2ew8_A            5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNL--GRRVLTVKCDVSQPGDVEAFGKQVIST   79 (249)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhc--CCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            5699999999999999999999999999999999998 66554   33332  34678899999973  46677777777


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..  +.++...
T Consensus        80 ~g~--id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~  153 (249)
T 2ew8_A           80 FGR--CDILVNNAGIYPL--IPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL--KIEAYTH  153 (249)
T ss_dssp             HSC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS--CCSSCHH
T ss_pred             cCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc--CCCCchh
Confidence            775  5599999998754  567889999999999999999999999999999888889999999999988  6788899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      |++||+|+++|+++++.|++++||+||+|+||++.|++.+
T Consensus       154 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  193 (249)
T 2ew8_A          154 YISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTE  193 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccch
Confidence            9999999999999999999999999999999999999976

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.7e-39  Score=268.07  Aligned_cols=190  Identities=25%  Similarity=0.332  Sum_probs=160.7

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEE-eCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIK  125 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~  125 (255)
                      +.++||+++||||++|||+++|++|+++|++|++. .|+.+..++..+++.+.  +.++..+.+|++|  ++++.++++.
T Consensus        23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~  100 (267)
T 3u5t_A           23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA--GGKALTAQADVSDPAAVRRLFATAE  100 (267)
T ss_dssp             ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            44679999999999999999999999999999998 56667777777777665  3467889999998  3567778888


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCc
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~  205 (255)
                      +.++  ++|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|.|++  +|+||++||..+..  +.++.
T Consensus       101 ~~~g--~iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~--~~~~~  172 (267)
T 3u5t_A          101 EAFG--GVDVLVNNAGIMPL--TTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV--GGRIINMSTSQVGL--LHPSY  172 (267)
T ss_dssp             HHHS--CEEEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCTHHHH--CCTTC
T ss_pred             HHcC--CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeChhhcc--CCCCc
Confidence            8887  46699999999754  56889999999999999999999999999999954  48999999999888  67889


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ..|++||+|+++|+++|+.|++++||+||+|+||+++|++.++
T Consensus       173 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  215 (267)
T 3u5t_A          173 GIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLE  215 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC------
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccc
Confidence            9999999999999999999999999999999999999999754

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=2.5e-38  Score=263.57  Aligned_cols=189  Identities=25%  Similarity=0.355  Sum_probs=168.4

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~  130 (255)
                      +|+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.  +.++..+.+|++|.  +++.++++.+.+++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDRDQVFAAVEQARKTLGG   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999999999999888888887664  34578889999973  46677777777775


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCchhch
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYA  209 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~Y~  209 (255)
                        +|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..  +.++...|+
T Consensus        80 --id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~Y~  153 (256)
T 1geg_A           80 --FDVIVNNAGVAPS--TPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV--GNPELAVYS  153 (256)
T ss_dssp             --CCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--CCTTBHHHH
T ss_pred             --CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcC--CCCCchhHH
Confidence              5599999998643  5678899999999999999999999999999998877 79999999999887  678889999


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      +||+|+++|+++++.|++++||+||+|+||++.|++.+..
T Consensus       154 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  193 (256)
T 1geg_A          154 SSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEI  193 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhh
Confidence            9999999999999999999999999999999999987653

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=1.7e-38  Score=264.35  Aligned_cols=187  Identities=24%  Similarity=0.268  Sum_probs=166.2

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~  128 (255)
                      ++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++..+.+|++|  ++++.++++.+.+
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999998877766554     2357888999997  3566777777777


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++  +|+||||||+...  .++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..  +.++...|
T Consensus        78 g~--iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~Y  151 (254)
T 1hdc_A           78 GS--VDGLVNNAGISTG--MFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM--GLALTSSY  151 (254)
T ss_dssp             SC--CCEEEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTCHHH
T ss_pred             CC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc--CCCCchhH
Confidence            75  5599999998753  457889999999999999999999999999999888889999999999887  67888999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++||+|+++|+++++.|+.++||+||+|+||++.|++.+.
T Consensus       152 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  191 (254)
T 1hdc_A          152 GASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAE  191 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccc
Confidence            9999999999999999999999999999999999998664

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.2e-38  Score=263.42  Aligned_cols=192  Identities=22%  Similarity=0.274  Sum_probs=167.1

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCC-hhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERI  124 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~  124 (255)
                      .++++||+++||||++|||+++|++|+++|++|++++++ .+.+++..+++.+.  +.++..+.+|++|  ++++.++++
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~  103 (271)
T 3v2g_A           26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA--GGRAVAIRADNRDAEAIEQAIRET  103 (271)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHH
Confidence            345779999999999999999999999999999998655 56677777777665  4567889999998  356777888


Q ss_pred             HHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                      .+.+++  +|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|.|++  .|+||++||..+... +.++
T Consensus       104 ~~~~g~--iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~~~~~-~~~~  176 (271)
T 3v2g_A          104 VEALGG--LDILVNSAGIWHS--APLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD--GGRIITIGSNLAELV-PWPG  176 (271)
T ss_dssp             HHHHSC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGGGTCC-CSTT
T ss_pred             HHHcCC--CcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChhhccC-CCCC
Confidence            888885  5599999998754  56889999999999999999999999999999854  689999999877652 3678


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.+.
T Consensus       177 ~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~  220 (271)
T 3v2g_A          177 ISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPA  220 (271)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCS
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccc
Confidence            89999999999999999999999999999999999999999754

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=6.7e-38  Score=261.50  Aligned_cols=192  Identities=24%  Similarity=0.298  Sum_probs=170.3

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.  +.++..+.+|++|.  +++.++++.+.
T Consensus        11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (260)
T 2zat_A           11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE--GLSVTGTVCHVGKAEDRERLVAMAVNL   88 (260)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            466999999999999999999999999999999999999888888887664  34577889999973  46667777777


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|+||||||+... ..++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..  +.++...
T Consensus        89 ~g~--iD~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~  163 (260)
T 2zat_A           89 HGG--VDILVSNAAVNPF-FGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYH--PFPNLGP  163 (260)
T ss_dssp             HSC--CCEEEECCCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS--CCTTBHH
T ss_pred             cCC--CCEEEECCCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcC--CCCCchh
Confidence            775  5599999998532 2457788999999999999999999999999999888889999999999987  6788899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      |++||+|+++|+++++.|++++||+||+|+||++.|++.+.
T Consensus       164 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  204 (260)
T 2zat_A          164 YNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQV  204 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchh
Confidence            99999999999999999999999999999999999999764

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-38  Score=260.86  Aligned_cols=184  Identities=21%  Similarity=0.282  Sum_probs=162.7

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      ++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +  +..+.+|++|.  +++.++++.+.+
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~--~~~~~~D~~~~~~~~~~~~~~~~~~   75 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----G--AHPVVMDVADPASVERGFAEALAHL   75 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----T--CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----C--CEEEEecCCCHHHHHHHHHHHHHHc
Confidence            56899999999999999999999999999999999988777655433     1  56788999973  466777788888


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++  +|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||.. ..  +.++...|
T Consensus        76 g~--id~lvn~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~--~~~~~~~Y  148 (245)
T 1uls_A           76 GR--LDGVVHYAGITRD--NFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YL--GNLGQANY  148 (245)
T ss_dssp             SS--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GG--CCTTCHHH
T ss_pred             CC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hc--CCCCchhH
Confidence            75  5599999998753  567889999999999999999999999999999888889999999988 66  66788999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++||+|+.+|+++++.|++++||+||+|+||+++|++.+.
T Consensus       149 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  188 (245)
T 1uls_A          149 AASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK  188 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhh
Confidence            9999999999999999999999999999999999999764

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1e-38  Score=265.71  Aligned_cols=193  Identities=23%  Similarity=0.282  Sum_probs=169.7

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEe-CChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIK  125 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~  125 (255)
                      ...++|+++||||++|||+++|++|+++|++|++.+ |+.+..++..+++.+.  ..++..+.+|++|  ++++.++++.
T Consensus         9 ~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   86 (256)
T 3ezl_A            9 MVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL--GFDFYASEGNVGDWDSTKQAFDKVK   86 (256)
T ss_dssp             ----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeeEEEecCCCCHHHHHHHHHHHH
Confidence            346799999999999999999999999999999988 7777777777777665  3467889999997  3567777787


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCc
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~  205 (255)
                      +.++  ++|+||||||+...  .++.+.+.++|++.+++|+.|++++++.++|.|++++.|+||++||..+..  +.++.
T Consensus        87 ~~~g--~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~  160 (256)
T 3ezl_A           87 AEVG--EIDVLVNNAGITRD--VVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK--GQFGQ  160 (256)
T ss_dssp             HHTC--CEEEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGG--SCSCC
T ss_pred             HhcC--CCCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcc--CCCCC
Confidence            7777  46799999998754  568889999999999999999999999999999988889999999999988  77889


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ..|++||+|+++|+++++.|++++||+|++++||+++|++.+..
T Consensus       161 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  204 (256)
T 3ezl_A          161 TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI  204 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccccc
Confidence            99999999999999999999999999999999999999987654

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=5.6e-38  Score=266.26  Aligned_cols=188  Identities=21%  Similarity=0.193  Sum_probs=165.0

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEe-CChhhHHHHHHHHHhhcCCceEEEEEEECCCC-------------
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD-------------  116 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-------------  116 (255)
                      ++||+++||||++|||+++|++|+++|++|++++ |+.+++++..+++.+.. +.++..+.+|+++.             
T Consensus         7 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (291)
T 1e7w_A            7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADGSAP   85 (291)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCCCC----CCC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhc-CCeeEEEEeecCCcccccccccccccc
Confidence            5699999999999999999999999999999999 99999988888886333 34678889999863             


Q ss_pred             ------cHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCC--------------HHHHHhHhHHhhhHHHHHHHHH
Q 025260          117 ------LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVD--------------QVLLKNLIKVNVEGTTKVTQAV  176 (255)
Q Consensus       117 ------~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~--------------~~~~~~~~~~N~~~~~~l~~~~  176 (255)
                            +++.++++.+.+++  +|+||||||+...  .++.+.+              .++|++++++|+.+++++++++
T Consensus        86 ~~~~~~v~~~~~~~~~~~g~--iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  161 (291)
T 1e7w_A           86 VTLFTRCAELVAACYTHWGR--CDVLVNNASSFYP--TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAF  161 (291)
T ss_dssp             BCHHHHHHHHHHHHHHHHSC--CCEEEECCCCCCC--CCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHhcCC--CCEEEECCCCCCC--CChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHH
Confidence                  35666777777775  5599999998754  4577788              8999999999999999999999


Q ss_pred             hhhhhhCC------CcEEEEECCccccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          177 LPGMLKRK------KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       177 lp~~~~~~------~g~iv~vsS~~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                      +|.|++++      .|+||++||..+..  +.++...|++||+|+.+|+++|+.|++++||+||+|+||+++|+|
T Consensus       162 ~~~m~~~~~~~~~~~g~Iv~isS~~~~~--~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~  234 (291)
T 1e7w_A          162 AHRVAGTPAKHRGTNYSIINMVDAMTNQ--PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD  234 (291)
T ss_dssp             HHHHHTSCGGGSCSCEEEEEECCTTTTS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG
T ss_pred             HHHHHhcCCCCCCCCcEEEEEechhhcC--CCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc
Confidence            99998877      69999999999988  778899999999999999999999999999999999999999998

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2.5e-38  Score=266.48  Aligned_cols=193  Identities=23%  Similarity=0.291  Sum_probs=169.1

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK  125 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~  125 (255)
                      .++++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.  + ++..+.+|++|.  +++.++++.
T Consensus        24 ~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~-~~~~~~~Dv~d~~~v~~~~~~~~  100 (276)
T 2b4q_A           24 YFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY--G-DCQAIPADLSSEAGARRLAQALG  100 (276)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS--S-CEEECCCCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--C-ceEEEEeeCCCHHHHHHHHHHHH
Confidence            44578999999999999999999999999999999999999888887777542  2 678889999973  456667777


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCC----cEEEEECCccccccCC
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK----GAIVNIGSGAAIVIPS  201 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~----g~iv~vsS~~~~~~~~  201 (255)
                      +.+++  +|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.    |+||++||..+..  +
T Consensus       101 ~~~g~--iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~--~  174 (276)
T 2b4q_A          101 ELSAR--LDILVNNAGTSWG--AALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGIS--A  174 (276)
T ss_dssp             HHCSC--CSEEEECCCCCCC--CCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTC--C
T ss_pred             HhcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcC--C
Confidence            77764  5699999998754  56788899999999999999999999999999987665    9999999999887  6


Q ss_pred             CCCch-hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          202 DPLYS-VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       202 ~~~~~-~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .+... .|++||+|+++|+++++.|++++||+||+|+||++.|++.+..
T Consensus       175 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  223 (276)
T 2b4q_A          175 MGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHI  223 (276)
T ss_dssp             CCCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHH
T ss_pred             CCCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhc
Confidence            67777 9999999999999999999999999999999999999998653

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=3.5e-38  Score=262.07  Aligned_cols=193  Identities=27%  Similarity=0.318  Sum_probs=153.0

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIK  125 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~  125 (255)
                      .++++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  ..++..+.+|++|  ++++.++++.
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   81 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD--GGTAISVAVDVSDPESAKAMADRTL   81 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            46678999999999999999999999999999999999999999998888765  4568889999998  4567778888


Q ss_pred             HHhcCCCccEEEEecCCCCC-cccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          126 EAIEGLDVGVLINNVGISYP-YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                      +.+++  +|+||||||+... ...++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..++.     +
T Consensus        82 ~~~g~--id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----~  154 (253)
T 3qiv_A           82 AEFGG--IDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL-----Y  154 (253)
T ss_dssp             HHHSC--CCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------
T ss_pred             HHcCC--CCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC-----C
Confidence            88875  5599999998531 23457788999999999999999999999999999988899999999988763     3


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ...|++||+|+++|+++++.|+.++||+|++++||++.|++.+..
T Consensus       155 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  199 (253)
T 3qiv_A          155 SNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTT  199 (253)
T ss_dssp             -----CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-----------
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhc
Confidence            567999999999999999999999999999999999999987654

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=5.9e-38  Score=266.89  Aligned_cols=195  Identities=26%  Similarity=0.369  Sum_probs=170.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcC-CceEEEEEEECCCC--cHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYA-KTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.+. ..++..+.+|++|.  +++.++++.+
T Consensus        23 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  102 (297)
T 1xhl_A           23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA  102 (297)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence            46799999999999999999999999999999999999999888888866432 12688899999973  5667777888


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC-CCc
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD-PLY  205 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~-~~~  205 (255)
                      .+++  +|+||||||+....+..+.+.+.++|++.+++|+.|++.++++++|.|++++ |+||++||..+..  +. ++.
T Consensus       103 ~~g~--iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~--~~~~~~  177 (297)
T 1xhl_A          103 KFGK--IDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGP--QAHSGY  177 (297)
T ss_dssp             HHSC--CCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSS--SCCTTS
T ss_pred             hcCC--CCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhcc--CCCCCc
Confidence            8875  5599999998654222277899999999999999999999999999998776 9999999998877  55 778


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ..|++||+|+++|+++++.|++++||+||+|+||++.|++.+..
T Consensus       178 ~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~  221 (297)
T 1xhl_A          178 PYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAM  221 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHT
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcccccc
Confidence            99999999999999999999999999999999999999987653

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=4.1e-39  Score=269.37  Aligned_cols=191  Identities=18%  Similarity=0.205  Sum_probs=162.5

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCC---hhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN---PDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVE  122 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~  122 (255)
                      .++++||+++||||++|||+++|++|+++|++|++++|+   .+.+++..+++.+.  +.++..+.+|++|  ++++.++
T Consensus         6 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~   83 (262)
T 3ksu_A            6 YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ--GAKVALYQSDLSNEEEVAKLFD   83 (262)
T ss_dssp             CSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT--TCEEEEEECCCCSHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHH
Confidence            345779999999999999999999999999999998765   45667777777655  4578899999998  4567778


Q ss_pred             HHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC
Q 025260          123 RIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD  202 (255)
Q Consensus       123 ~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~  202 (255)
                      ++.+.+++  +|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|  ++.|+||++||..+..  +.
T Consensus        84 ~~~~~~g~--iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m--~~~g~iv~isS~~~~~--~~  155 (262)
T 3ksu_A           84 FAEKEFGK--VDIAINTVGKVLK--KPIVETSEAEFDAMDTINNKVAYFFIKQAAKHM--NPNGHIITIATSLLAA--YT  155 (262)
T ss_dssp             HHHHHHCS--EEEEEECCCCCCS--SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTE--EEEEEEEEECCCHHHH--HH
T ss_pred             HHHHHcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhh--cCCCEEEEEechhhcc--CC
Confidence            88888874  6699999998754  568899999999999999999999999999999  3468999999998887  66


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++...|++||+|+.+|+++|+.|++++||+||+|+||+++|++.+.
T Consensus       156 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  201 (262)
T 3ksu_A          156 GFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYG  201 (262)
T ss_dssp             CCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHT
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc
Confidence            7788999999999999999999999999999999999999998754

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=6.2e-38  Score=264.22  Aligned_cols=192  Identities=27%  Similarity=0.333  Sum_probs=170.6

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.  +.++..+.+|++|.  +++.++++.+.
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   96 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVVER   96 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999999999888888888664  34578889999973  46667777777


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhh--hhhCCCcEEEEECCccccccCCCCCc
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPG--MLKRKKGAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~--~~~~~~g~iv~vsS~~~~~~~~~~~~  205 (255)
                      +++  +|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|.  |++++.|+||++||..+..  +.++.
T Consensus        97 ~g~--iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~--~~~~~  170 (277)
T 2rhc_B           97 YGP--VDVLVNNAGRPGG--GATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ--GVVHA  170 (277)
T ss_dssp             TCS--CSEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTS--CCTTC
T ss_pred             hCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECcccccc--CCCCC
Confidence            775  5599999998653  55788999999999999999999999999999  9887789999999999887  67888


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ..|++||+|+++|+++++.|++++||+||+|+||++.|++.+..
T Consensus       171 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  214 (277)
T 2rhc_B          171 APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASV  214 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhh
Confidence            99999999999999999999999999999999999999987653

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=4.4e-38  Score=263.99  Aligned_cols=192  Identities=24%  Similarity=0.323  Sum_probs=168.7

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEe-CChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      +++|+++||||++|||+++|++|+++|++|++.+ |+.+..++..+++.+.  +.++..+.+|++|  ++++.++++.+.
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~  100 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA--GRDFKAYAVDVADFESCERCAEKVLAD  100 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTT--TCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999998 6666666666666543  4567889999998  457777888888


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|+||||||+...  .++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..  +.++...
T Consensus       101 ~g~--id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~  174 (269)
T 3gk3_A          101 FGK--VDVLINNAGITRD--ATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSR--GAFGQAN  174 (269)
T ss_dssp             HSC--CSEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH--CCTTBHH
T ss_pred             cCC--CCEEEECCCcCCC--cchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhcc--CCCCcch
Confidence            885  5599999998754  568889999999999999999999999999999988889999999999988  7788999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      |++||+|+++|+++++.|++++||+||+|+||+++|+|.+...
T Consensus       175 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~  217 (269)
T 3gk3_A          175 YASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVP  217 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC--
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhc
Confidence            9999999999999999999999999999999999999987653

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=3.7e-38  Score=263.28  Aligned_cols=189  Identities=15%  Similarity=0.152  Sum_probs=154.8

Q ss_pred             cCCcccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHH
Q 025260           44 RPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGV  121 (255)
Q Consensus        44 ~~~~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~  121 (255)
                      +....++++||+++||||++|||+++|++|+++|++|++++|++++..+..++.       .+..+.+|++|.  +++.+
T Consensus        18 ~~~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~Dv~~~~~v~~~~   90 (260)
T 3gem_A           18 YFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA-------GAVALYGDFSCETGIMAFI   90 (260)
T ss_dssp             ---------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH-------TCEEEECCTTSHHHHHHHH
T ss_pred             ccccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc-------CCeEEECCCCCHHHHHHHH
Confidence            334556788999999999999999999999999999999999987764433322       257789999973  56677


Q ss_pred             HHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCC
Q 025260          122 ERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS  201 (255)
Q Consensus       122 ~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~  201 (255)
                      +++.+.+++  +|+||||||+...  .. .+.+.++|++.+++|+.|+++++++++|+|++++.|+||++||..+..  +
T Consensus        91 ~~~~~~~g~--iD~lv~nAg~~~~--~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~--~  163 (260)
T 3gem_A           91 DLLKTQTSS--LRAVVHNASEWLA--ET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRK--G  163 (260)
T ss_dssp             HHHHHHCSC--CSEEEECCCCCCC--CC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGT--C
T ss_pred             HHHHHhcCC--CCEEEECCCccCC--CC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcC--C
Confidence            777777775  5599999998754  22 567888999999999999999999999999988889999999999988  7


Q ss_pred             CCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       202 ~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      .++...|++||+|+++|+++++.|+++ +|+||+|+||++.|++.+
T Consensus       164 ~~~~~~Y~asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~  208 (260)
T 3gem_A          164 SSKHIAYCATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKD  208 (260)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC----
T ss_pred             CCCcHhHHHHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCC
Confidence            788999999999999999999999988 799999999999999754

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=7.1e-38  Score=265.66  Aligned_cols=190  Identities=22%  Similarity=0.280  Sum_probs=164.7

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHH-HHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD-VSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+.++..+ ..+.+.+.  +.++..+.+|++|  ++++.++++.+
T Consensus        44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~  121 (291)
T 3ijr_A           44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE--GVKCVLLPGDLSDEQHCKDIVQETVR  121 (291)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT--TCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999999765443 44444433  4568889999998  35677788888


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .+++  +|+||||||+... ..++.+.+.++|++.+++|+.|+++++++++|+|++  .|+||++||..+..  +.++..
T Consensus       122 ~~g~--iD~lvnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~--~~~~~~  194 (291)
T 3ijr_A          122 QLGS--LNILVNNVAQQYP-QQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIVAYE--GNETLI  194 (291)
T ss_dssp             HHSS--CCEEEECCCCCCC-CSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--TCEEEEECCTHHHH--CCTTCH
T ss_pred             HcCC--CCEEEECCCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCEEEEEechHhcC--CCCCCh
Confidence            8885  5599999998653 245788999999999999999999999999999853  58999999999988  778899


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      .|++||+|+++|+++++.|++++||+||+|+||++.|++.++
T Consensus       195 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  236 (291)
T 3ijr_A          195 DYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPS  236 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccc
Confidence            999999999999999999999999999999999999998654

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=4.2e-38  Score=262.76  Aligned_cols=191  Identities=20%  Similarity=0.281  Sum_probs=161.8

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEE-eCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      +++||+++||||++|||+++|++|+++|++|+++ +|+.+..++..+++.+.  +.++..+.+|++|  ++++.++++.+
T Consensus         5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (259)
T 3edm_A            5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL--GRSALAIKADLTNAAEVEAAISAAAD   82 (259)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT--TSCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999998 66777778888887665  3457788999998  45777788888


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccc-ccCCCCCc
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAI-VIPSDPLY  205 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~-~~~~~~~~  205 (255)
                      .+++  +|+||||||+... ..++.+.+.++|++++++|+.|+++++++++|.|++  .|+||++||..+. .  +.++.
T Consensus        83 ~~g~--id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~--~~~~~  155 (259)
T 3edm_A           83 KFGE--IHGLVHVAGGLIA-RKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDG--GGPGA  155 (259)
T ss_dssp             HHCS--EEEEEECCCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHC--CSTTC
T ss_pred             HhCC--CCEEEECCCccCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhccC--CCCCc
Confidence            8874  6699999998633 356889999999999999999999999999999965  5899999999887 4  56788


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      ..|++||+|+++|+++++.|+++. |+||+|+||+++|+|.+.+.
T Consensus       156 ~~Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~  199 (259)
T 3edm_A          156 LAYATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFT  199 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC-------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCccccccc
Confidence            999999999999999999999886 99999999999999987653

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=3.6e-38  Score=261.58  Aligned_cols=184  Identities=27%  Similarity=0.406  Sum_probs=155.0

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcCC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEGL  131 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~  131 (255)
                      |+++||||++|||+++|++|+++|++|++++|+++++++..+++.     .++..+.+|++|.  +++.++++.+.++  
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g--   73 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG-----DNLYIAQLDVRNRAAIEEMLASLPAEWC--   73 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-----TTEEEEECCTTCHHHHHHHHHTSCTTTC--
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----CceEEEEcCCCCHHHHHHHHHHHHHhCC--
Confidence            689999999999999999999999999999999988887766652     3578899999974  2333333333344  


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHH
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAAT  211 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~as  211 (255)
                      ++|+||||||+... ..++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..  +.++...|++|
T Consensus        74 ~iD~lvnnAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~--~~~~~~~Y~as  150 (248)
T 3asu_A           74 NIDILVNNAGLALG-MEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW--PYAGGNVYGAT  150 (248)
T ss_dssp             CCCEEEECCCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS--CCTTCHHHHHH
T ss_pred             CCCEEEECCCcCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhcc--CCCCCchHHHH
Confidence            46799999998632 2457789999999999999999999999999999888889999999999987  67888999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEeeeeeee-eCCcc
Q 025260          212 KAYIDQFSRSLYVEYRKSGIDVQCQVLFLLC-FYNLN  247 (255)
Q Consensus       212 K~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~-T~~~~  247 (255)
                      |+|+++|+++++.|++++||+||+|+||+++ |+|.+
T Consensus       151 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~  187 (248)
T 3asu_A          151 KAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSN  187 (248)
T ss_dssp             HHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-----
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchh
Confidence            9999999999999999999999999999999 99865

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=9.4e-38  Score=263.43  Aligned_cols=192  Identities=27%  Similarity=0.392  Sum_probs=168.4

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcC-CceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYA-KTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      ++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.+. ..++..+.+|++|.  +++.++++.+.
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            5699999999999999999999999999999999999998888888765432 12688899999983  46677778787


Q ss_pred             hcCCCccEEEEecCCCCCcccc----cccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC-
Q 025260          128 IEGLDVGVLINNVGISYPYARF----FHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD-  202 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~----~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~-  202 (255)
                      +++  +|+||||||+...  .+    +.+.+.++|++.+++|+.++++++++++|.|++++ |+||++||..+..  +. 
T Consensus        84 ~g~--iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~--~~~  156 (280)
T 1xkq_A           84 FGK--IDVLVNNAGAAIP--DAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGP--QAQ  156 (280)
T ss_dssp             HSC--CCEEEECCCCCCC--CTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSS--SCC
T ss_pred             cCC--CCEEEECCCCCCC--CCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccC--CCC
Confidence            875  5599999998643  34    67889999999999999999999999999998766 9999999998877  55 


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ++...|++||+|+++|+++++.|++++||+||+|+||++.||+.+..
T Consensus       157 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  203 (280)
T 1xkq_A          157 PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAM  203 (280)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHT
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCccccc
Confidence            77899999999999999999999999999999999999999987653

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=1.2e-37  Score=260.07  Aligned_cols=186  Identities=24%  Similarity=0.275  Sum_probs=165.9

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~  128 (255)
                      ++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+     .+..+.+|++|  ++++.++++.+.+
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~~   79 (260)
T 1nff_A            5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD-----AARYVHLDVTQPAQWKAAVDTAVTAF   79 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG-----GEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc-----CceEEEecCCCHHHHHHHHHHHHHHc
Confidence            5699999999999999999999999999999999999888776665532     37788999997  3566777788888


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++  +|+||||||+...  .++.+.+.++|++.+++|+.|++++++.++|.|++++.|+||++||..+..  +.++...|
T Consensus        80 g~--iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~Y  153 (260)
T 1nff_A           80 GG--LHVLVNNAGILNI--GTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLA--GTVACHGY  153 (260)
T ss_dssp             SC--CCEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTBHHH
T ss_pred             CC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcC--CCCCchhH
Confidence            75  5599999998753  567889999999999999999999999999999888889999999999987  67888999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      ++||+|+++|+++++.|++++||+||+|+||++.|++.+
T Consensus       154 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  192 (260)
T 1nff_A          154 TATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD  192 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc
Confidence            999999999999999999999999999999999999864

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=2.7e-38  Score=265.36  Aligned_cols=184  Identities=22%  Similarity=0.283  Sum_probs=160.7

Q ss_pred             cccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHH
Q 025260           47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERI  124 (255)
Q Consensus        47 ~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~  124 (255)
                      ...+++||++|||||++|||+++|++|+++|++|++++|+++...            .....+.+|++|  ++++.++++
T Consensus         8 ~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~Dv~~~~~v~~~~~~~   75 (269)
T 3vtz_A            8 HMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV------------NVSDHFKIDVTNEEEVKEAVEKT   75 (269)
T ss_dssp             --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT------------TSSEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc------------CceeEEEecCCCHHHHHHHHHHH
Confidence            344577999999999999999999999999999999999876431            134667899997  356777888


Q ss_pred             HHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                      .+.+++  +|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||..+..  +.++
T Consensus        76 ~~~~g~--iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~  149 (269)
T 3vtz_A           76 TKKYGR--IDILVNNAGIEQY--SPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYA--ATKN  149 (269)
T ss_dssp             HHHHSC--CCEEEECCCCCCC--CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--BCTT
T ss_pred             HHHcCC--CCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc--CCCC
Confidence            888885  5599999998754  568889999999999999999999999999999988899999999999988  6788


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ...|++||+|+++|+++++.|+++ ||+||+|+||++.|+|.+..
T Consensus       150 ~~~Y~asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~  193 (269)
T 3vtz_A          150 AAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKA  193 (269)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhh
Confidence            999999999999999999999988 89999999999999987554

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=5.3e-38  Score=260.38  Aligned_cols=192  Identities=23%  Similarity=0.356  Sum_probs=151.1

Q ss_pred             CcccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHH
Q 025260           46 AKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIK  125 (255)
Q Consensus        46 ~~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  125 (255)
                      ....++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++     ...+....+|+++.  +.++++.
T Consensus         7 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~--~~~~~~~   79 (249)
T 3f9i_A            7 HHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-----KDNYTIEVCNLANK--EECSNLI   79 (249)
T ss_dssp             --CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSH--HHHHHHH
T ss_pred             cccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----ccCccEEEcCCCCH--HHHHHHH
Confidence            3445577999999999999999999999999999999999999888877766     33577888999874  4455555


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCc
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~  205 (255)
                      +.++  ++|++|||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..  +.++.
T Consensus        80 ~~~~--~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~  153 (249)
T 3f9i_A           80 SKTS--NLDILVCNAGITSD--TLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIA--GNPGQ  153 (249)
T ss_dssp             HTCS--CCSEEEECCC---------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC----CCSCS
T ss_pred             HhcC--CCCEEEECCCCCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhcc--CCCCC
Confidence            5554  46799999998754  456778889999999999999999999999999988889999999999988  77889


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      ..|++||+|+++|+++++.|++++||+|++++||++.|++.+.+.
T Consensus       154 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~  198 (249)
T 3f9i_A          154 ANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLN  198 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CC
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccC
Confidence            999999999999999999999999999999999999999987643

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-37  Score=259.65  Aligned_cols=184  Identities=26%  Similarity=0.303  Sum_probs=163.0

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      ++||+++||||++|||+++|++|+++|++|++++|++++ ++..+++.      . ..+.+|++|.  +++.++++.+.+
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~------~-~~~~~D~~~~~~~~~~~~~~~~~~   75 (256)
T 2d1y_A            4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG------G-AFFQVDLEDERERVRFVEEAAYAL   75 (256)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT------C-EEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh------C-CEEEeeCCCHHHHHHHHHHHHHHc
Confidence            569999999999999999999999999999999999887 65555542      3 6788999973  566777777777


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++  +|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..  +.++...|
T Consensus        76 g~--iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~--~~~~~~~Y  149 (256)
T 2d1y_A           76 GR--VDVLVNNAAIAAP--GSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF--AEQENAAY  149 (256)
T ss_dssp             SC--CCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS--BCTTBHHH
T ss_pred             CC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccC--CCCCChhH
Confidence            75  5599999998754  567889999999999999999999999999999888889999999999887  66888999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++||+|+++|+++++.|++++||+||+++||++.|++.+.
T Consensus       150 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  189 (256)
T 2d1y_A          150 NASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLE  189 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhh
Confidence            9999999999999999999999999999999999998655

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=7.9e-38  Score=260.42  Aligned_cols=189  Identities=25%  Similarity=0.273  Sum_probs=165.7

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      ++||+++||||++|||+++|++|+++|++|++++|+.+  ++..+++.+.  +.++..+.+|++|.  +++.++++.+.+
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~   77 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARH--GVKAVHHPADLSDVAQIEALFALAEREF   77 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTT--SCCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhc--CCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999999999999999876  4555666543  34577889999973  566777777878


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++  +|+||||||+...  .++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..  +.++...|
T Consensus        78 g~--id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~Y  151 (255)
T 2q2v_A           78 GG--VDILVNNAGIQHV--APVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLV--GSTGKAAY  151 (255)
T ss_dssp             SS--CSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS--CCTTBHHH
T ss_pred             CC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhcc--CCCCchhH
Confidence            75  5599999998743  567889999999999999999999999999999988889999999999887  67888999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ++||+|+++|+++++.|+.++||+||+|+||++.||+.+..
T Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  192 (255)
T 2q2v_A          152 VAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQ  192 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhh
Confidence            99999999999999999999999999999999999987643

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.3e-37  Score=259.13  Aligned_cols=184  Identities=23%  Similarity=0.258  Sum_probs=163.2

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcC--CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHh
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAI  128 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G--~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~  128 (255)
                      ||+++||||++|||+++|++|+++|  ++|++.+|+++++++..+++     +.++..+.+|++|  ++++.++++.+.+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-----GDRFFYVVGDITEDSVLKQLVNAAVKGH   76 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH-----GGGEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh-----CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            7999999999999999999999985  78999999998888777665     3468889999998  3577778888888


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++  +|+||||||+..+ ..++.+.+.++|++.+++|+.|+++++++++|+|++++ |+||++||..+..  +.++...|
T Consensus        77 g~--id~lvnnAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~--~~~~~~~Y  150 (254)
T 3kzv_A           77 GK--IDSLVANAGVLEP-VQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNM--YFSSWGAY  150 (254)
T ss_dssp             SC--CCEEEEECCCCCC-CTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCC--SSCCSHHH
T ss_pred             CC--ccEEEECCcccCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhcc--CCCCcchH
Confidence            75  5599999998643 25688999999999999999999999999999998765 9999999999988  77889999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ++||+|+++|+++|+.|+  .||+||+|+||+++|+|.+..
T Consensus       151 ~asK~a~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~  189 (254)
T 3kzv_A          151 GSSKAALNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNI  189 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCC
T ss_pred             HHHHHHHHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHh
Confidence            999999999999999998  589999999999999998764

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=1e-37  Score=263.39  Aligned_cols=188  Identities=21%  Similarity=0.274  Sum_probs=159.7

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++..+.+|+++  ++++.++++.+.
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-----GGNAVGVVGDVRSLQDQKRAAERCLAA   76 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----BTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc-----CCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            467999999999999999999999999999999999998887765543     3467889999997  457778888888


Q ss_pred             hcCCCccEEEEecCCCCCcc---cccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          128 IEGLDVGVLINNVGISYPYA---RFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                      +++  +|+||||||+.....   ....+.+.++|++++++|+.++++++++++|+|+++ +|+||++||..+..  +.++
T Consensus        77 ~g~--iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~  151 (281)
T 3zv4_A           77 FGK--IDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS-RGSVVFTISNAGFY--PNGG  151 (281)
T ss_dssp             HSC--CCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGTS--SSSS
T ss_pred             cCC--CCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCeEEEEecchhcc--CCCC
Confidence            885  559999999864311   112345567899999999999999999999999775 49999999999988  7788


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ...|++||+|+++|+++|+.|+++. |+||+|+||+++|+|.+.
T Consensus       152 ~~~Y~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~  194 (281)
T 3zv4_A          152 GPLYTATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGP  194 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCC
T ss_pred             CchhHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccc
Confidence            9999999999999999999999986 999999999999998753

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=9.7e-38  Score=259.63  Aligned_cols=186  Identities=22%  Similarity=0.248  Sum_probs=165.8

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      ++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++..+.+|++|.  +++.++.+.+.+
T Consensus         4 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (253)
T 1hxh_A            4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRRL   78 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            56999999999999999999999999999999999998887776665     34578889999973  566777787878


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++  +|+||||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|++++ |+||++||..+..  +.++...|
T Consensus        79 g~--id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~--~~~~~~~Y  151 (253)
T 1hxh_A           79 GT--LNVLVNNAGILLP--GDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWL--PIEQYAGY  151 (253)
T ss_dssp             CS--CCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTS--CCTTBHHH
T ss_pred             CC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcC--CCCCCccH
Confidence            75  5599999998743  5678899999999999999999999999999998777 9999999999988  67888999


Q ss_pred             hHHHHHHHHHHHHHHHHHccC--CceEEEeeeeeeeeCCcch
Q 025260          209 AATKAYIDQFSRSLYVEYRKS--GIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~--gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++||+|+++|+++++.|++++  ||+||+|+||++.||+.+.
T Consensus       152 ~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~  193 (253)
T 1hxh_A          152 SASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQA  193 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhh
Confidence            999999999999999999988  9999999999999998654

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.3e-38  Score=261.15  Aligned_cols=186  Identities=24%  Similarity=0.256  Sum_probs=163.0

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+..+           ...+..+.+|++|  ++++.++++.+
T Consensus        24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dv~d~~~v~~~~~~~~~   92 (260)
T 3un1_A           24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA-----------DPDIHTVAGDISKPETADRIVREGIE   92 (260)
T ss_dssp             HHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS-----------STTEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-----------cCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3467999999999999999999999999999999999876432           2367889999998  35677788888


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .+++  +|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+....+.++..
T Consensus        93 ~~g~--iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~  168 (260)
T 3un1_A           93 RFGR--IDSLVNNAGVFLA--KPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSA  168 (260)
T ss_dssp             HHSC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCH
T ss_pred             HCCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccH
Confidence            8885  5599999999754  56889999999999999999999999999999999989999999998876533445668


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .|++||+|+++|+++++.|++++||+||+|+||++.||+.+..
T Consensus       169 ~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~  211 (260)
T 3un1_A          169 LASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE  211 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH
Confidence            9999999999999999999999999999999999999998653

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=1.3e-37  Score=263.63  Aligned_cols=191  Identities=19%  Similarity=0.204  Sum_probs=160.2

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh-hhHHHHHHHHHhhcCCceEEEEEEECCC----C--cHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAKYAKTQIKSVVVDFSG----D--LDEG  120 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~----~--~~~~  120 (255)
                      ..+++||+++||||++|||+++|++|+++|++|++++|+. +++++..+++.+.. +.++..+.+|++|    .  +++.
T Consensus        18 ~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~v~~~   96 (288)
T 2x9g_A           18 GSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER-SNTAVVCQADLTNSNVLPASCEEI   96 (288)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSCSTTHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhc-CCceEEEEeecCCccCCHHHHHHH
Confidence            3446799999999999999999999999999999999998 88888888876333 3568889999997    3  3555


Q ss_pred             HHHHHHHhcCCCccEEEEecCCCCCccccc-----cc-----CCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC------
Q 025260          121 VERIKEAIEGLDVGVLINNVGISYPYARFF-----HE-----VDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK------  184 (255)
Q Consensus       121 ~~~~~~~~~~~~id~lv~nag~~~~~~~~~-----~~-----~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~------  184 (255)
                      ++++.+.+++  +|+||||||+...  .++     .+     .+.++|++.+++|+.+++.+++.++|.|++++      
T Consensus        97 ~~~~~~~~g~--iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~  172 (288)
T 2x9g_A           97 INSCFRAFGR--CDVLVNNASAFYP--TPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSS  172 (288)
T ss_dssp             HHHHHHHHSC--CCEEEECCCCCCC--CCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CC
T ss_pred             HHHHHHhcCC--CCEEEECCCCCCC--CccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCC
Confidence            6666677775  5599999998754  334     56     78899999999999999999999999998776      


Q ss_pred             CcEEEEECCccccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          185 KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       185 ~g~iv~vsS~~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                      .|+||++||..+..  +.++...|++||+|+++|+++|+.|++++||+||+|+||++.|++
T Consensus       173 ~g~iv~isS~~~~~--~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~  231 (288)
T 2x9g_A          173 NLSIVNLCDAMVDQ--PCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV  231 (288)
T ss_dssp             CEEEEEECCTTTTS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT
T ss_pred             CeEEEEEecccccC--CCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc
Confidence            78999999999987  778899999999999999999999999999999999999999998

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-37  Score=266.36  Aligned_cols=188  Identities=21%  Similarity=0.193  Sum_probs=165.0

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEe-CChhhHHHHHHHHHhhcCCceEEEEEEECCCC-------------
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD-------------  116 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-------------  116 (255)
                      ++||+++||||++|||+++|++|+++|++|++++ |+.+++++..+++.+.. +.++..+.+|++|.             
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~  122 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADGSAP  122 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCC-------CC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCeEEEEEeeCCCchhccccccccccc
Confidence            6799999999999999999999999999999999 99999988888886333 34678889999873             


Q ss_pred             ------cHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCC--------------HHHHHhHhHHhhhHHHHHHHHH
Q 025260          117 ------LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVD--------------QVLLKNLIKVNVEGTTKVTQAV  176 (255)
Q Consensus       117 ------~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~--------------~~~~~~~~~~N~~~~~~l~~~~  176 (255)
                            ++++++++.+.+++  +|+||||||+...  .++.+.+              .++|++++++|+.+++.+++++
T Consensus       123 ~~~~~~v~~~~~~~~~~~g~--iD~lVnnAG~~~~--~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  198 (328)
T 2qhx_A          123 VTLFTRCAELVAACYTHWGR--CDVLVNNASSFYP--TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAF  198 (328)
T ss_dssp             BCHHHHHHHHHHHHHHHHSC--CCEEEECCCCCCC--CCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHhcCC--CCEEEECCCCCCC--CChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence                  45566777777775  5599999998754  4567777              8999999999999999999999


Q ss_pred             hhhhhhCC------CcEEEEECCccccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          177 LPGMLKRK------KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       177 lp~~~~~~------~g~iv~vsS~~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                      +|.|++++      .|+||++||..+..  +.++...|++||+|+++|+++|+.|++++||+||+|+||++.|++
T Consensus       199 ~~~m~~~~~~~~~~~g~IV~isS~~~~~--~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~  271 (328)
T 2qhx_A          199 AHRVAGTPAKHRGTNYSIINMVDAMTNQ--PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD  271 (328)
T ss_dssp             HHHHHHSCGGGSCSCEEEEEECCTTTTS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC
T ss_pred             HHHHHhcCCcCCCCCcEEEEECchhhcc--CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc
Confidence            99998877      79999999999988  778899999999999999999999999999999999999999998

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=1.7e-37  Score=259.42  Aligned_cols=198  Identities=20%  Similarity=0.206  Sum_probs=164.7

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      .+.+|+++||||++|||+++|++|+++|++|++++|+.+...+..++..+.. +.++..+.+|++|  ++++.++++.+.
T Consensus         4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~   82 (264)
T 3i4f_A            4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV-EERLQFVQADVTKKEDLHKIVEEAMSH   82 (264)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGG-GGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            4558999999999999999999999999999999877655444433333322 4568899999998  356777888888


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|+||||||+......++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||.......+.++...
T Consensus        83 ~g~--id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~  160 (264)
T 3i4f_A           83 FGK--IDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSA  160 (264)
T ss_dssp             HSC--CCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHH
T ss_pred             hCC--CCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCch
Confidence            875  559999999543334568889999999999999999999999999999988889999999984432235677899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      |++||+|+++|+++|+.|++++||+||+|+||++.|++.+...
T Consensus       161 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~  203 (264)
T 3i4f_A          161 FAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATI  203 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCH
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhcc
Confidence            9999999999999999999999999999999999999987654

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.6e-37  Score=269.17  Aligned_cols=195  Identities=22%  Similarity=0.280  Sum_probs=170.7

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhh-------HHHHHHHHHhhcCCceEEEEEEECCC--CcHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK-------LKDVSDSIQAKYAKTQIKSVVVDFSG--DLDE  119 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~  119 (255)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.++       +++..+++.+.  +.++..+.+|++|  ++++
T Consensus        41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~  118 (346)
T 3kvo_A           41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV--GGKALPCIVDVRDEQQISA  118 (346)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT--TCEEEEEECCTTCHHHHHH
T ss_pred             CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHH
Confidence            35779999999999999999999999999999999999874       56667777654  4578889999998  3577


Q ss_pred             HHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc
Q 025260          120 GVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI  199 (255)
Q Consensus       120 ~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~  199 (255)
                      +++++.+.+++  +|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+...
T Consensus       119 ~~~~~~~~~g~--iDilVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~  194 (346)
T 3kvo_A          119 AVEKAIKKFGG--IDILVNNASAISL--TNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNP  194 (346)
T ss_dssp             HHHHHHHHHSC--CCEEEECCCCCCC--CCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCG
T ss_pred             HHHHHHHHcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCC
Confidence            78888888885  5599999998754  5688999999999999999999999999999999888899999999998873


Q ss_pred             CCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeee-eeeCCcchhh
Q 025260          200 PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFL-LCFYNLNDLV  250 (255)
Q Consensus       200 ~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~-v~T~~~~~~~  250 (255)
                      .+.++...|++||+|+++|+++|+.|++ .||+||+|+||+ +.|++.+.+.
T Consensus       195 ~~~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~~  245 (346)
T 3kvo_A          195 VWFKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDMLG  245 (346)
T ss_dssp             GGTSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHHC
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhhc
Confidence            2267789999999999999999999999 899999999995 9998876543

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=2.9e-37  Score=262.49  Aligned_cols=193  Identities=16%  Similarity=0.138  Sum_probs=165.4

Q ss_pred             cccCCcEEEEECCCC--chHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHH
Q 025260           49 LRKYGSWALVTGPTD--GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERI  124 (255)
Q Consensus        49 ~~~~gk~vlITGas~--gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~  124 (255)
                      +.++||+++||||+|  |||+++|++|+++|++|++++|+++..+...+...+ .+.  ...+.+|++|  ++++.++++
T Consensus        26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-~~~--~~~~~~Dv~d~~~v~~~~~~~  102 (296)
T 3k31_A           26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAES-LGV--KLTVPCDVSDAESVDNMFKVL  102 (296)
T ss_dssp             CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH-HTC--CEEEECCTTCHHHHHHHHHHH
T ss_pred             hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh-cCC--eEEEEcCCCCHHHHHHHHHHH
Confidence            457799999999997  999999999999999999999997665544443333 223  4788999998  457777888


Q ss_pred             HHHhcCCCccEEEEecCCCCCc--ccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC
Q 025260          125 KEAIEGLDVGVLINNVGISYPY--ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD  202 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~  202 (255)
                      .+.+++  +|+||||||+....  ..++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||..+..  +.
T Consensus       103 ~~~~g~--iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~~~--~~  176 (296)
T 3k31_A          103 AEEWGS--LDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYGAEK--VV  176 (296)
T ss_dssp             HHHHSC--CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTS--CC
T ss_pred             HHHcCC--CCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhhcc--CC
Confidence            888885  55999999987421  145788999999999999999999999999999865  69999999999988  77


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      ++...|++||+|+++|+++|+.|++++||+||+|+||+++|++.+...
T Consensus       177 ~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~  224 (296)
T 3k31_A          177 PHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGIS  224 (296)
T ss_dssp             TTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCH
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhccc
Confidence            889999999999999999999999999999999999999999987543

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-37  Score=263.25  Aligned_cols=188  Identities=20%  Similarity=0.266  Sum_probs=163.1

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCC------------hhhHHHHHHHHHhhcCCceEEEEEEECCC-
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN------------PDKLKDVSDSIQAKYAKTQIKSVVVDFSG-  115 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~------------~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-  115 (255)
                      .+++||+++||||++|||+++|++|+++|++|++++|+            .+.+++..+++.+.  +.++..+.+|++| 
T Consensus         6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~   83 (287)
T 3pxx_A            6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT--GRKAYTAEVDVRDR   83 (287)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT--TSCEEEEECCTTCH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc--CCceEEEEccCCCH
Confidence            35779999999999999999999999999999999998            66777777777654  4578899999998 


Q ss_pred             -CcHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCc
Q 025260          116 -DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSG  194 (255)
Q Consensus       116 -~~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~  194 (255)
                       ++++.++++.+.+++  +|+||||||+...  .  .+.+.++|++.+++|+.|+++++++++|+|  ++.|+||++||.
T Consensus        84 ~~v~~~~~~~~~~~g~--id~lv~nAg~~~~--~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~  155 (287)
T 3pxx_A           84 AAVSRELANAVAEFGK--LDVVVANAGICPL--G--AHLPVQAFADAFDVDFVGVINTVHAALPYL--TSGASIITTGSV  155 (287)
T ss_dssp             HHHHHHHHHHHHHHSC--CCEEEECCCCCCC--C--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGC--CTTCEEEEECCH
T ss_pred             HHHHHHHHHHHHHcCC--CCEEEECCCcCcc--c--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHh--hcCcEEEEeccc
Confidence             356777888888885  5599999998754  2  247889999999999999999999999998  456899999998


Q ss_pred             cccccCCC-----------CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          195 AAIVIPSD-----------PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       195 ~~~~~~~~-----------~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      .+..  +.           ++...|++||+|+++|+++++.|++++||+||+|+||+++|+|.+.
T Consensus       156 ~~~~--~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  218 (287)
T 3pxx_A          156 AGLI--AAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNS  218 (287)
T ss_dssp             HHHH--HHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSS
T ss_pred             hhcc--cccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccc
Confidence            8876  32           5678899999999999999999999999999999999999999864

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=1.9e-37  Score=263.32  Aligned_cols=188  Identities=24%  Similarity=0.228  Sum_probs=163.5

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh--hhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP--DKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIK  125 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~  125 (255)
                      +++||++|||||++|||+++|++|+++|++|++++|+.  +..++..+++.+.  +.++..+.+|++|  ++++.++++.
T Consensus        46 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~  123 (294)
T 3r3s_A           46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC--GRKAVLLPGDLSDESFARSLVHKAR  123 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT--TCCEEECCCCTTSHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            46799999999999999999999999999999999873  3455555555544  4568889999998  3567778888


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCc
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~  205 (255)
                      +.+++  +|+||||||+... ..++.+.+.++|++.+++|+.|+++++++++|.|.+  +|+||++||..+..  +.++.
T Consensus       124 ~~~g~--iD~lv~nAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~~~~--~~~~~  196 (294)
T 3r3s_A          124 EALGG--LDILALVAGKQTA-IPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQAYQ--PSPHL  196 (294)
T ss_dssp             HHHTC--CCEEEECCCCCCC-CSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGGGTS--CCTTC
T ss_pred             HHcCC--CCEEEECCCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECChhhcc--CCCCc
Confidence            88885  5599999998643 245788999999999999999999999999999854  58999999999988  77889


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                      ..|++||+|+++|+++|+.|++++||+||+|+||+|+|++.
T Consensus       197 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~  237 (294)
T 3r3s_A          197 LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQ  237 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccc
Confidence            99999999999999999999999999999999999999983

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=2e-37  Score=254.75  Aligned_cols=189  Identities=22%  Similarity=0.273  Sum_probs=165.0

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhc
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE  129 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~  129 (255)
                      ++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++..+.+|++|.  +++.++++.+.++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ-GVEVFYHHLDVSKAESVEEFSKKVLERFG   79 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            47999999999999999999999999999999999999999988887544 45788999999983  4666677777777


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhch
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA  209 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~  209 (255)
                      +  +|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|.| +++.|++|+++|..+..  +.+....|+
T Consensus        80 ~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~~~~~ii~~sS~~~~~--~~~~~~~Y~  152 (235)
T 3l77_A           80 D--VDVVVANAGLGYF--KRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSL-KRTGGLALVTTSDVSAR--LIPYGGGYV  152 (235)
T ss_dssp             S--CSEEEECCCCCCC--CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHH-HHHTCEEEEECCGGGSS--CCTTCHHHH
T ss_pred             C--CCEEEECCccccc--cCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH-hhcCCcEEEEecchhcc--cCCCcchHH
Confidence            5  5599999998754  568899999999999999999999999999999 44568999999988887  678889999


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      +||+|+++|++++  ++...||+||+|+||+++|+|.+...
T Consensus       153 ~sKaa~~~~~~~l--~~~~~~i~v~~v~PG~v~T~~~~~~~  191 (235)
T 3l77_A          153 STKWAARALVRTF--QIENPDVRFFELRPGAVDTYFGGSKP  191 (235)
T ss_dssp             HHHHHHHHHHHHH--HHHCTTSEEEEEEECSBSSSTTTCCS
T ss_pred             HHHHHHHHHHHHH--hhcCCCeEEEEEeCCccccccccccC
Confidence            9999999999999  44467999999999999999987654

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=1.9e-37  Score=257.72  Aligned_cols=192  Identities=23%  Similarity=0.336  Sum_probs=167.6

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEE-eCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      ++||+++||||++|||+++|++|+++|++|+++ +|+.+..++..+++.+.  +.++..+.+|+++.  +++.++.+.+.
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDNE   82 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc--CCceEEEecCcCCHHHHHHHHHHHHHH
Confidence            569999999999999999999999999999885 77788888888888765  45688899999973  45666666666


Q ss_pred             hcC----CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC
Q 025260          128 IEG----LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP  203 (255)
Q Consensus       128 ~~~----~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~  203 (255)
                      ++.    .++|+||||||+...  .++.+.+.++|++++++|+.+++++++.++|.|.  +.|+||++||..+..  +.|
T Consensus        83 ~~~~~~~~~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~~~iv~isS~~~~~--~~~  156 (255)
T 3icc_A           83 LQNRTGSTKFDILINNAGIGPG--AFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLR--DNSRIINISSAATRI--SLP  156 (255)
T ss_dssp             HHHHHSSSCEEEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEE--EEEEEEEECCGGGTS--CCT
T ss_pred             hcccccCCcccEEEECCCCCCC--CChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhC--CCCEEEEeCChhhcc--CCC
Confidence            543    358899999998754  5688899999999999999999999999999983  458999999999988  778


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      +...|++||+|+++|+++++.|+.++||+||+++||+++|+|.++..
T Consensus       157 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~  203 (255)
T 3icc_A          157 DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELL  203 (255)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTT
T ss_pred             CcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhc
Confidence            89999999999999999999999999999999999999999987654

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.7e-37  Score=265.71  Aligned_cols=189  Identities=22%  Similarity=0.275  Sum_probs=159.2

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCC-----hhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-----PDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVER  123 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~  123 (255)
                      .++|+++||||++|||+++|++|+++|++|++++|+     .+.+++..+.+.+.  +.++..+.+|++|  ++++.+++
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~--~~~~~~~~~Dvtd~~~v~~~~~~   80 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN--DVDLRTLELDVQSQVSVDRAIDQ   80 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH--TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHH
Confidence            458999999999999999999999999999988776     44555555555544  4568899999998  35677788


Q ss_pred             HHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC
Q 025260          124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP  203 (255)
Q Consensus       124 ~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~  203 (255)
                      +.+.+++  +|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+... +.+
T Consensus        81 ~~~~~g~--iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~-~~~  155 (324)
T 3u9l_A           81 IIGEDGR--IDVLIHNAGHMVF--GPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGG-TPP  155 (324)
T ss_dssp             HHHHHSC--CSEEEECCCCCBC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-CCS
T ss_pred             HHHHcCC--CCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccC-CCC
Confidence            8888875  5599999998743  5688999999999999999999999999999999888999999999988752 346


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                      +...|++||+|+++|+++++.|++++||+|++|+||++.|++.
T Consensus       156 ~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~  198 (324)
T 3u9l_A          156 YLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTN  198 (324)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-----
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCch
Confidence            6789999999999999999999999999999999999998764

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=2.4e-38  Score=263.84  Aligned_cols=190  Identities=16%  Similarity=0.216  Sum_probs=152.1

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK  125 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~  125 (255)
                      .++++||+++||||++|||+++|++|+++|++|++++|+.++..   +++     ..++..+.+|++|.  +++.++.+.
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~   75 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV---ADL-----GDRARFAAADVTDEAAVASALDLAE   75 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHH---HHT-----CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHH---Hhc-----CCceEEEECCCCCHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999654332   222     44678899999973  455556555


Q ss_pred             HHhcCCCccEEEEecCCCCCcc--cccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhh--------CCCcEEEEECCcc
Q 025260          126 EAIEGLDVGVLINNVGISYPYA--RFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK--------RKKGAIVNIGSGA  195 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~--------~~~g~iv~vsS~~  195 (255)
                      + ++  ++|+||||||+.....  .+..+.+.++|++.+++|+.++++++++++|.|++        ++.|+||++||..
T Consensus        76 ~-~g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  152 (257)
T 3tl3_A           76 T-MG--TLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVA  152 (257)
T ss_dssp             H-HS--CEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC
T ss_pred             H-hC--CCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchh
Confidence            4 55  5779999999864311  11235899999999999999999999999999987        5679999999999


Q ss_pred             ccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          196 AIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       196 ~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      +..  +.++...|++||+|+++|+++|+.|++++||+||+|+||+++|+|.+...
T Consensus       153 ~~~--~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~  205 (257)
T 3tl3_A          153 AFD--GQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLP  205 (257)
T ss_dssp             --C--CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---C
T ss_pred             hcC--CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhcc
Confidence            988  67788999999999999999999999999999999999999999987643

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=3e-37  Score=259.88  Aligned_cols=191  Identities=26%  Similarity=0.386  Sum_probs=158.9

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhc-CCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKY-AKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++|+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.. .+.++..+.+|++|.  +++.++++.+.
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999998888887774321 234688899999973  56677778888


Q ss_pred             hcCCCccEEEEecCCCCCcccccccC----CHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccc-cccCCC
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEV----DQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA-IVIPSD  202 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~----~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~-~~~~~~  202 (255)
                      +++  +|+||||||+...  .++.+.    +.++|++.+++|+.|+++++++++|.|++++ |+||++||..+ ..  +.
T Consensus        84 ~g~--id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~--~~  156 (278)
T 1spx_A           84 FGK--LDILVNNAGAAIP--DSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLH--AT  156 (278)
T ss_dssp             HSC--CCEEEECCC---------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSS--CC
T ss_pred             cCC--CCEEEECCCCCCC--cccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEeccccccc--CC
Confidence            875  5599999998643  456677    8999999999999999999999999998765 99999999988 76  66


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++...|++||+|+++|+++++.|++++||+||+|+||++.|++.+.
T Consensus       157 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  202 (278)
T 1spx_A          157 PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSA  202 (278)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC---
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccc
Confidence            7889999999999999999999999999999999999999998754

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=2.4e-37  Score=258.23  Aligned_cols=191  Identities=24%  Similarity=0.287  Sum_probs=162.3

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH-
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA-  127 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~-  127 (255)
                      ++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.  +.++..+.+|++|.  +++.++++.+. 
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL--GGQCVPVVCDSSQESEVRSLFEQVDREQ   80 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--SSEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc--CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            45899999999999999999999999999999999999988888888765  34678899999974  45556666554 


Q ss_pred             hcCCCccEEEEecCCCCC-----cccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC
Q 025260          128 IEGLDVGVLINNVGISYP-----YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD  202 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~-----~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~  202 (255)
                      +++  +|+||||||....     ...++.+.+.++|++++++|+.+++++++.++|.|++++.|+||++||..+..  +.
T Consensus        81 ~g~--id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~  156 (260)
T 2qq5_A           81 QGR--LDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQ--YM  156 (260)
T ss_dssp             TTC--CCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTS--CC
T ss_pred             CCC--ceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcC--CC
Confidence            564  5699999963211     12457788889999999999999999999999999888889999999998876  32


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                       +...|++||+|+++|+++++.|++++||+||+|+||+++|+|.+.
T Consensus       157 -~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  201 (260)
T 2qq5_A          157 -FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKE  201 (260)
T ss_dssp             -SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC--
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHH
Confidence             358999999999999999999999999999999999999999765

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=8.5e-38  Score=262.70  Aligned_cols=189  Identities=28%  Similarity=0.391  Sum_probs=158.9

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      ++ |+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.   .++..+.+|++|.  +++.++++.+.+
T Consensus        20 ~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~   95 (272)
T 2nwq_A           20 MS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK---TRVLPLTLDVRDRAAMSAAVDNLPEEF   95 (272)
T ss_dssp             -C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT---SCEEEEECCTTCHHHHHHHHHTCCGGG
T ss_pred             cC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC---CcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            44 89999999999999999999999999999999999888887777542   4678899999984  334444444445


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCc-EEEEECCccccccCCCCCchh
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKG-AIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g-~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +  ++|+||||||+... ..++.+.+.++|++++++|+.|++++++.++|.|++++.| +||++||..+..  +.++...
T Consensus        96 g--~iD~lvnnAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~--~~~~~~~  170 (272)
T 2nwq_A           96 A--TLRGLINNAGLALG-TDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKW--PYPGSHV  170 (272)
T ss_dssp             S--SCCEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTS--CCTTCHH
T ss_pred             C--CCCEEEECCCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhcc--CCCCCch
Confidence            5  46699999998642 2457889999999999999999999999999999888778 999999999987  6788899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      |++||+|+++|+++++.|++++||+||+|+||+++|+|.+.
T Consensus       171 Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~  211 (272)
T 2nwq_A          171 YGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLV  211 (272)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC------
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhc
Confidence            99999999999999999999999999999999999998753

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=1.9e-37  Score=261.54  Aligned_cols=187  Identities=27%  Similarity=0.343  Sum_probs=166.4

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      .++|+++||||++|||+++|++|+++|++|++++|+.+++++..++.     ...+..+.+|++|.  +++.++++.+.+
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   77 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-----PDRAEAISLDVTDGERIDVVAADVLARY   77 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC-----TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence            45899999999999999999999999999999999998877765543     34678899999983  566777777777


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++  +|+||||||+...  .++.+.+.++|++.+++|+.|++++++.++|.|++++.|+||++||..+..  +.++..+|
T Consensus        78 g~--id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~Y  151 (281)
T 3m1a_A           78 GR--VDVLVNNAGRTQV--GAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQL--SFAGFSAY  151 (281)
T ss_dssp             SC--CSEEEECCCCEEE--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC--CCTTCHHH
T ss_pred             CC--CCEEEECCCcCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccC--CCCCchHH
Confidence            75  5599999998743  567889999999999999999999999999999988889999999999988  77889999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++||+|+++|+++++.|++++||+|++++||++.|++...
T Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  191 (281)
T 3m1a_A          152 SATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGK  191 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCC
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccc
Confidence            9999999999999999999999999999999999999653

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=7.2e-38  Score=262.35  Aligned_cols=181  Identities=22%  Similarity=0.244  Sum_probs=159.8

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+.+.+++             .....+|+++.  +++.++++.+.
T Consensus        25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~-------------~~~~~~Dv~~~~~~~~~~~~~~~~   91 (266)
T 3uxy_A           25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA-------------DLHLPGDLREAAYADGLPGAVAAG   91 (266)
T ss_dssp             -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC-------------SEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh-------------hhccCcCCCCHHHHHHHHHHHHHh
Confidence            4679999999999999999999999999999999998765321             13347888873  46677778888


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|+|++++.|+||++||..+..  +.++...
T Consensus        92 ~g~--iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~--~~~~~~~  165 (266)
T 3uxy_A           92 LGR--LDIVVNNAGVISR--GRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLR--PGPGHAL  165 (266)
T ss_dssp             HSC--CCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTB--CCTTBHH
T ss_pred             cCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC--CCCCChH
Confidence            885  5599999999764  568899999999999999999999999999999988899999999999988  7788999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++.+..
T Consensus       166 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  207 (266)
T 3uxy_A          166 YCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTG  207 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhh
Confidence            999999999999999999999999999999999999987654

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=3.1e-37  Score=258.29  Aligned_cols=195  Identities=17%  Similarity=0.167  Sum_probs=169.8

Q ss_pred             cccCCcEEEEECCC--CchHHHHHHHHHHcCCcEEEEeCChhhH-HHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHH
Q 025260           49 LRKYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKL-KDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVER  123 (255)
Q Consensus        49 ~~~~gk~vlITGas--~gIG~~la~~la~~G~~V~l~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~  123 (255)
                      ++++||+++||||+  +|||+++|++|+++|++|++++|+.++. ++..+++.+.. +.++..+.+|++|  ++++.+++
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~   94 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY-GIKAKAYKCQVDSYESCEKLVKD   94 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHH-CCCEECCBCCTTCHHHHHHHHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhc-CCceeEEecCCCCHHHHHHHHHH
Confidence            45789999999999  9999999999999999999999887665 67777776654 4578899999998  45677788


Q ss_pred             HHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC
Q 025260          124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP  203 (255)
Q Consensus       124 ~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~  203 (255)
                      +.+.+++  +|+||||||+...  .++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+......+
T Consensus        95 ~~~~~g~--id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  170 (267)
T 3gdg_A           95 VVADFGQ--IDAFIANAGATAD--SGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQ  170 (267)
T ss_dssp             HHHHTSC--CSEEEECCCCCCC--SCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSS
T ss_pred             HHHHcCC--CCEEEECCCcCCC--CCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCC
Confidence            8887775  5599999998754  55788999999999999999999999999999998888999999999987732225


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      +...|++||+|+++|+++++.|+.+. |+||+++||+++|++.+..
T Consensus       171 ~~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~  215 (267)
T 3gdg_A          171 EQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFV  215 (267)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGS
T ss_pred             CCCcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhC
Confidence            78899999999999999999999887 9999999999999998654

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=6.9e-37  Score=257.44  Aligned_cols=186  Identities=19%  Similarity=0.183  Sum_probs=158.3

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeC-ChhhHHHHHHHHHhhcCCceEEEEEEECCCC------cHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD------LDEGVER  123 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~------~~~~~~~  123 (255)
                      ++||+++||||++|||+++|++|+++|++|++++| +++++++..+++.+.+ +.++..+.+|++|.      +++.+++
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhc-CCceEEEeccCCCccccHHHHHHHHHH
Confidence            56999999999999999999999999999999999 9888888888887653 24578889999875      3556677


Q ss_pred             HHHHhcCCCccEEEEecCCCCCcccccccCCH-----------HHHHhHhHHhhhHHHHHHHHHhhhhhhCCC------c
Q 025260          124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQ-----------VLLKNLIKVNVEGTTKVTQAVLPGMLKRKK------G  186 (255)
Q Consensus       124 ~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~-----------~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~------g  186 (255)
                      +.+.+++  +|+||||||+...  .++.+.+.           ++|++.+++|+.++++++++++|.|+ ++.      |
T Consensus        88 ~~~~~g~--id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g  162 (276)
T 1mxh_A           88 SFRAFGR--CDVLVNNASAYYP--TPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNL  162 (276)
T ss_dssp             HHHHHSC--CCEEEECCCCCCC--CCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCE
T ss_pred             HHHhcCC--CCEEEECCCCCCC--CCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCc
Confidence            7777775  5599999998754  45677787           89999999999999999999999997 555      8


Q ss_pred             EEEEECCccccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          187 AIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       187 ~iv~vsS~~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                      +||++||..+..  +.++...|++||+|+++|+++++.|++++||+||+|+||++.||
T Consensus       163 ~iv~isS~~~~~--~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~  218 (276)
T 1mxh_A          163 SVVNLCDAMTDL--PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP  218 (276)
T ss_dssp             EEEEECCGGGGS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred             EEEEECchhhcC--CCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC
Confidence            999999999988  77888999999999999999999999999999999999999998

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=9.6e-38  Score=268.43  Aligned_cols=192  Identities=21%  Similarity=0.243  Sum_probs=170.4

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCC----------hhhHHHHHHHHHhhcCCceEEEEEEECCC--Cc
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN----------PDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DL  117 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~----------~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~  117 (255)
                      .++||+++||||++|||+++|++|+++|++|++++|+          .+.+++..+++.+.  +.++..+.+|++|  ++
T Consensus        24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v  101 (322)
T 3qlj_A           24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA--GGEAVADGSNVADWDQA  101 (322)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT--TCEEEEECCCTTSHHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHH
Confidence            4779999999999999999999999999999999998          67788888888765  3568889999998  45


Q ss_pred             HHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC------CcEEEEE
Q 025260          118 DEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK------KGAIVNI  191 (255)
Q Consensus       118 ~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~------~g~iv~v  191 (255)
                      ++.++++.+.+++  +|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|.+++      .|+||++
T Consensus       102 ~~~~~~~~~~~g~--iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~i  177 (322)
T 3qlj_A          102 AGLIQTAVETFGG--LDVLVNNAGIVRD--RMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINT  177 (322)
T ss_dssp             HHHHHHHHHHHSC--CCEEECCCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred             HHHHHHHHHHcCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEE
Confidence            6777888888885  5599999999754  5688999999999999999999999999999997532      3899999


Q ss_pred             CCccccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          192 GSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       192 sS~~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      ||..+..  +.++...|++||+|+++|+++++.|++++||+||+|+|| +.|+|.+...
T Consensus       178 sS~~~~~--~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~  233 (322)
T 3qlj_A          178 SSGAGLQ--GSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVF  233 (322)
T ss_dssp             CCHHHHH--CBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSC
T ss_pred             cCHHHcc--CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhh
Confidence            9999988  678899999999999999999999999999999999999 9999987643

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=5.2e-37  Score=259.23  Aligned_cols=191  Identities=18%  Similarity=0.248  Sum_probs=164.0

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhh-HHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK-LKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK  125 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~  125 (255)
                      ++++||+++||||++|||+++|++|+++|++|++++|+.++ .++..+++.+.  +.++..+.+|++|.  +++.++++.
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~  102 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVEDIVRMFEEAV  102 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh--CCCeEEEEcCCCCHHHHHHHHHHHH
Confidence            44679999999999999999999999999999999998754 55566666554  34678889999973  466777777


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC-C
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP-L  204 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~-~  204 (255)
                      +.+++  +|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|.|  ++.|+||++||..+..  +.+ .
T Consensus       103 ~~~g~--iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~~~--~~~~~  174 (283)
T 1g0o_A          103 KIFGK--LDIVCSNSGVVSF--GHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQA--KAVPK  174 (283)
T ss_dssp             HHHSC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS--CTTCEEEEECCGGGTC--SSCSS
T ss_pred             HHcCC--CCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH--hcCCeEEEEechhhcc--CCCCC
Confidence            77775  5599999998753  567889999999999999999999999999998  4568999999998877  444 4


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ...|++||+|+++|+++++.|++++||+||+|+||++.|++.+..
T Consensus       175 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  219 (283)
T 1g0o_A          175 HAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAV  219 (283)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhh
Confidence            889999999999999999999999999999999999999986653

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=2.7e-37  Score=258.24  Aligned_cols=189  Identities=25%  Similarity=0.288  Sum_probs=165.9

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.     .++..+.+|++|  ++++.++++.+.
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~d~~~v~~~~~~~~~~   83 (263)
T 3ak4_A            9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE-----NGGFAVEVDVTKRASVDAAMQKAIDA   83 (263)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT-----TCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-----cCCeEEEEeCCCHHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999999887776655442     146778999997  356677778888


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCch
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      +++  +|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..  +.+...
T Consensus        84 ~g~--iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~  157 (263)
T 3ak4_A           84 LGG--FDLLCANAGVSTM--RPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKV--GAPLLA  157 (263)
T ss_dssp             HTC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS--CCTTCH
T ss_pred             cCC--CCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccc--CCCCch
Confidence            875  5599999998743  5578899999999999999999999999999998877 79999999999887  678889


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .|++||+|+++|+++++.|++++||+||+|+||++.|++.+..
T Consensus       158 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  200 (263)
T 3ak4_A          158 HYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQERE  200 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhh
Confidence            9999999999999999999999999999999999999987543

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=8.5e-37  Score=255.55  Aligned_cols=195  Identities=17%  Similarity=0.166  Sum_probs=166.5

Q ss_pred             cccCCcEEEEECCC--CchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHH
Q 025260           49 LRKYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI  124 (255)
Q Consensus        49 ~~~~gk~vlITGas--~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~  124 (255)
                      ++++||+++||||+  +|||+++|++|+++|++|++++|+....+.. +++.+..+..++..+.+|++|.  +++.++++
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   81 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSV-HELAGTLDRNDSIILPCDVTNDAEIETCFASI   81 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHHTSSSCCCEEEECCCSSSHHHHHHHHHH
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHH-HHHHHhcCCCCceEEeCCCCCHHHHHHHHHHH
Confidence            45679999999999  6799999999999999999999997554444 4444444344788999999984  56777888


Q ss_pred             HHHhcCCCccEEEEecCCCCCc--ccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC
Q 025260          125 KEAIEGLDVGVLINNVGISYPY--ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD  202 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~  202 (255)
                      .+.+++  +|++|||||+....  ..++.+.+.++|++.+++|+.+++.++++++|.|++  +|+||++||..+..  +.
T Consensus        82 ~~~~g~--id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~--~~  155 (266)
T 3oig_A           82 KEQVGV--IHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE--GGSIVTLTYLGGEL--VM  155 (266)
T ss_dssp             HHHHSC--CCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTS--CC
T ss_pred             HHHhCC--eeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CceEEEEecccccc--cC
Confidence            888875  55999999987521  245778999999999999999999999999999853  59999999999988  77


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      ++...|++||+|+++|+++|+.|++++||+||+|+||+++|++.+...
T Consensus       156 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~  203 (266)
T 3oig_A          156 PNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGIS  203 (266)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccc
Confidence            889999999999999999999999999999999999999999887643

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=5e-37  Score=261.76  Aligned_cols=195  Identities=21%  Similarity=0.273  Sum_probs=165.2

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC---cHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD---LDEGVERIKE  126 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~  126 (255)
                      ..++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+ ..++..+.+|++|.   ++++++.+.+
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~v~~~~~~~~~   87 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN-HENVVFHQLDVTDPIATMSSLADFIKT   87 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-CCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCceEEEEccCCCcHHHHHHHHHHHHH
Confidence            3569999999999999999999999999999999999999999999987764 45688999999985   3666777888


Q ss_pred             HhcCCCccEEEEecCCCCC----------------------------cccccccCCHHHHHhHhHHhhhHHHHHHHHHhh
Q 025260          127 AIEGLDVGVLINNVGISYP----------------------------YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLP  178 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~----------------------------~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp  178 (255)
                      .+++  +|+||||||+...                            ...++.+.+.+++++++++|+.|++.+++.++|
T Consensus        88 ~~g~--iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  165 (311)
T 3o26_A           88 HFGK--LDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIP  165 (311)
T ss_dssp             HHSS--CCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             hCCC--CCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhH
Confidence            7775  5599999998642                            112355778999999999999999999999999


Q ss_pred             hhhhCCCcEEEEECCccccccCC-----------------------------------------CCCchhchHHHHHHHH
Q 025260          179 GMLKRKKGAIVNIGSGAAIVIPS-----------------------------------------DPLYSVYAATKAYIDQ  217 (255)
Q Consensus       179 ~~~~~~~g~iv~vsS~~~~~~~~-----------------------------------------~~~~~~Y~asK~al~~  217 (255)
                      .|++++.|+||++||..+.....                                         .++...|++||+|+++
T Consensus       166 ~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~  245 (311)
T 3o26_A          166 LLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNA  245 (311)
T ss_dssp             HHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHH
T ss_pred             hhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHH
Confidence            99888889999999998865210                                         1356789999999999


Q ss_pred             HHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          218 FSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       218 ~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |+++|+.|+.  +|+||+|+||+|+|+|.+..
T Consensus       246 ~~~~la~e~~--~i~v~~v~PG~v~T~~~~~~  275 (311)
T 3o26_A          246 YTRVLANKIP--KFQVNCVCPGLVKTEMNYGI  275 (311)
T ss_dssp             HHHHHHHHCT--TSEEEEECCCSBCSGGGTTC
T ss_pred             HHHHHHhhcC--CceEEEecCCceecCCcCCC
Confidence            9999999986  49999999999999998654

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=3.6e-37  Score=252.56  Aligned_cols=184  Identities=20%  Similarity=0.246  Sum_probs=152.9

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      |+++||||++|||+++|++|+++|++|++++|+++++++..+++     ..++..+.+|+++.  +.++++.+...+ .+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~--~~v~~~~~~~~~-~~   73 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-----SNNVGYRARDLASH--QEVEQLFEQLDS-IP   73 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-----SSCCCEEECCTTCH--HHHHHHHHSCSS-CC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----hhccCeEeecCCCH--HHHHHHHHHHhh-cC
Confidence            67999999999999999999999999999999999888776655     34567889999975  445555554443 23


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHHHH
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKA  213 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~asK~  213 (255)
                      |++|||||+...  .++.+.+.++|++.+++|+.|++++++.++|.|++++ ++||++||..+..  +.++...|++||+
T Consensus        74 d~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~--~~~~~~~Y~asKa  148 (230)
T 3guy_A           74 STVVHSAGSGYF--GLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQ--PKAQESTYCAVKW  148 (230)
T ss_dssp             SEEEECCCCCCC--SCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGGGTS--CCTTCHHHHHHHH
T ss_pred             CEEEEeCCcCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecccCC--CCCCCchhHHHHH
Confidence            799999998754  5688999999999999999999999999999997655 4999999999988  7788999999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          214 YIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       214 al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      |+++|+++++.|++++||+||+|+||+++|++.+...
T Consensus       149 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~  185 (230)
T 3guy_A          149 AVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSG  185 (230)
T ss_dssp             HHHHHHHHHHHHTTTSSCEEEEEEECCC---------
T ss_pred             HHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcC
Confidence            9999999999999999999999999999999987653

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=9.9e-37  Score=258.85  Aligned_cols=191  Identities=16%  Similarity=0.170  Sum_probs=159.0

Q ss_pred             ccCCcEEEEECCC--CchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHH
Q 025260           50 RKYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIK  125 (255)
Q Consensus        50 ~~~gk~vlITGas--~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~  125 (255)
                      .++||+++||||+  +|||+++|++|+++|++|++++|+++.. +..+++.+..+  .+..+.+|++|  ++++.++++.
T Consensus        28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~  104 (293)
T 3grk_A           28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALK-KRVEPLAEELG--AFVAGHCDVADAASIDAVFETLE  104 (293)
T ss_dssp             TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHH-HHHHHHHHHHT--CEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHHHHHHhcC--CceEEECCCCCHHHHHHHHHHHH
Confidence            3679999999999  5599999999999999999999996543 34444444432  46789999998  3567778888


Q ss_pred             HHhcCCCccEEEEecCCCCC--cccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC
Q 025260          126 EAIEGLDVGVLINNVGISYP--YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP  203 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~  203 (255)
                      +.+++  +|+||||||+...  ...++.+.+.++|++.+++|+.++++++++++|.|++  .|+||++||..+..  +.+
T Consensus       105 ~~~g~--iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~--~~~  178 (293)
T 3grk_A          105 KKWGK--LDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAEK--VMP  178 (293)
T ss_dssp             HHTSC--CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGTS--BCT
T ss_pred             HhcCC--CCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhcc--CCC
Confidence            87775  5599999998752  0245788999999999999999999999999999964  69999999999988  678


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      +...|++||+|+++|+++|+.|++++||+||+|+||+++|++.+..
T Consensus       179 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  224 (293)
T 3grk_A          179 NYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGI  224 (293)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcc
Confidence            8999999999999999999999999999999999999999997654

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=9.5e-37  Score=255.52  Aligned_cols=191  Identities=23%  Similarity=0.260  Sum_probs=168.3

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEE-EeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      +.+|+++||||++|||+++|++|+++|++|++ .+|+.+..++..+++.+.+  .++..+.+|++|  ++++.++++.+.
T Consensus        24 l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (267)
T 4iiu_A           24 AMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANG--GNGRLLSFDVANREQCREVLEHEIAQ  101 (267)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHH
Confidence            56899999999999999999999999999966 5688888888888887763  467889999997  346677777777


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhh-hCCCcEEEEECCccccccCCCCCch
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGML-KRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~-~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      +++  +|+||||||+...  .++.+.+.++|++.+++|+.+++++++.++|.|+ +++.|+||++||..+..  +.++..
T Consensus       102 ~g~--id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~  175 (267)
T 4iiu_A          102 HGA--WYGVVSNAGIARD--AAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVM--GNRGQV  175 (267)
T ss_dssp             HCC--CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHH--CCTTCH
T ss_pred             hCC--ccEEEECCCCCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhcc--CCCCCc
Confidence            775  5599999999754  5678899999999999999999999999999887 56689999999999988  778899


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .|++||+|+++|+++++.|++++||+|++|+||+++|++.+..
T Consensus       176 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  218 (267)
T 4iiu_A          176 NYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME  218 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc
Confidence            9999999999999999999999999999999999999998654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=2.1e-37  Score=285.94  Aligned_cols=189  Identities=22%  Similarity=0.271  Sum_probs=162.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      +++||+++||||++|||+++|++|+++|++|++.+|.  .+++..+++.+.  +.+...+.+|++++.++.++++.+.++
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~--~~~~~~~~i~~~--g~~~~~~~~Dv~~~~~~~~~~~~~~~G  394 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAA--GGEAWPDQHDVAKDSEAIIKNVIDKYG  394 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS--CCHHHHHHHHHT--TCEEEEECCCHHHHHHHHHHHHHHHHS
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc--cHHHHHHHHHhc--CCeEEEEEcChHHHHHHHHHHHHHhcC
Confidence            5779999999999999999999999999999999874  235566666654  335677788883334677788888888


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhch
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA  209 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~  209 (255)
                      +  +|+||||||+...  .++.+++.++|++++++|+.|+++++|+++|+|++++.|+||++||.++..  +.++...|+
T Consensus       395 ~--iDiLVnNAGi~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~--~~~~~~~Y~  468 (604)
T 2et6_A          395 T--IDILVNNAGILRD--RSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIY--GNFGQANYS  468 (604)
T ss_dssp             C--CCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS--CCTTBHHHH
T ss_pred             C--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcc--CCCCChhHH
Confidence            6  5599999998754  568899999999999999999999999999999988889999999999988  778899999


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      +||+|+.+|+++|+.|++++||+||+|+||. .|+|.+..
T Consensus       469 asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~  507 (604)
T 2et6_A          469 SSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSI  507 (604)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC----
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCcccccc
Confidence            9999999999999999999999999999995 99997653

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=3e-37  Score=284.90  Aligned_cols=188  Identities=26%  Similarity=0.285  Sum_probs=162.9

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh---------hhHHHHHHHHHhhcCCceEEEEEEECCC--Cc
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP---------DKLKDVSDSIQAKYAKTQIKSVVVDFSG--DL  117 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~---------~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~  117 (255)
                      ++++||+++||||++|||+++|++|+++|++|++.+|+.         +.++++.+++.+.+.  +.   .+|.+|  ++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~--~~---~~d~~d~~~~   78 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGG--VA---VADYNNVLDG   78 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTC--EE---EEECCCTTCH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCC--eE---EEEcCCHHHH
Confidence            456799999999999999999999999999999998765         667777788876532  22   246554  45


Q ss_pred             HHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccc
Q 025260          118 DEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAI  197 (255)
Q Consensus       118 ~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~  197 (255)
                      ++.++++.+.++++  |+||||||+...  .++.+.+.++|++++++|+.|+++++|+++|+|++++.|+||++||.++.
T Consensus        79 ~~~v~~~~~~~G~i--DiLVnNAGi~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~  154 (604)
T 2et6_A           79 DKIVETAVKNFGTV--HVIINNAGILRD--ASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGL  154 (604)
T ss_dssp             HHHHHHHHHHHSCC--CEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred             HHHHHHHHHHcCCC--CEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHc
Confidence            77888898989865  599999998753  56889999999999999999999999999999998888999999999998


Q ss_pred             ccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          198 VIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       198 ~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      .  +.++...|++||+|+.+|+++|+.|++++||+||+|+|| +.|+|.+.
T Consensus       155 ~--~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~  202 (604)
T 2et6_A          155 Y--GNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTES  202 (604)
T ss_dssp             H--CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHT
T ss_pred             C--CCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccc
Confidence            8  778899999999999999999999999999999999998 68988654

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=7.5e-37  Score=256.85  Aligned_cols=196  Identities=27%  Similarity=0.393  Sum_probs=169.5

Q ss_pred             cCCcccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHH
Q 025260           44 RPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGV  121 (255)
Q Consensus        44 ~~~~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~  121 (255)
                      .|.+..++++|+++||||++|||+++|++|+++|++|++++|+++.+++..+++++.  +.++..+.+|++|.  +++.+
T Consensus        22 ~~~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~   99 (272)
T 1yb1_A           22 MPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSA   99 (272)
T ss_dssp             ---CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHH
T ss_pred             cCCcccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc--CCeEEEEEeeCCCHHHHHHHH
Confidence            344456678999999999999999999999999999999999999888888888765  34688899999973  45666


Q ss_pred             HHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCC
Q 025260          122 ERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS  201 (255)
Q Consensus       122 ~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~  201 (255)
                      +++.+.+++  +|+||||||+...  .++.+.+.+++++.+++|+.+++++++.++|.|++++.|+||++||..+..  +
T Consensus       100 ~~~~~~~g~--iD~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--~  173 (272)
T 1yb1_A          100 KKVKAEIGD--VSILVNNAGVVYT--SDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV--S  173 (272)
T ss_dssp             HHHHHHTCC--CSEEEECCCCCCC--CCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC--C
T ss_pred             HHHHHHCCC--CcEEEECCCcCCC--cchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcC--C
Confidence            777777764  5699999998754  457788889999999999999999999999999988889999999999887  6


Q ss_pred             CCCchhchHHHHHHHHHHHHHHHHHc---cCCceEEEeeeeeeeeCCcc
Q 025260          202 DPLYSVYAATKAYIDQFSRSLYVEYR---KSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       202 ~~~~~~Y~asK~al~~~~~~l~~e~~---~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      .++...|++||+|+++|+++++.|+.   +.||+|++|+||+++|++.+
T Consensus       174 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~  222 (272)
T 1yb1_A          174 VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK  222 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccc
Confidence            67788999999999999999999997   67999999999999999865

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5.2e-37  Score=257.64  Aligned_cols=187  Identities=20%  Similarity=0.304  Sum_probs=163.4

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.      .+..+.+|++|.  +++.++++.+.
T Consensus         6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~Dv~d~~~v~~~~~~~~~~   79 (270)
T 1yde_A            6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP------GAVFILCDVTQEDDVKTLVSETIRR   79 (270)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT------TEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc------CCeEEEcCCCCHHHHHHHHHHHHHH
Confidence            3569999999999999999999999999999999999888776655431      267889999973  56677778887


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|+||||||+... ..++.+.+.++|++.+++|+.++++++++++|+|+++ .|+||++||..+..  +.+....
T Consensus        80 ~g~--iD~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~~  153 (270)
T 1yde_A           80 FGR--LDCVVNNAGHHPP-PQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAI--GQAQAVP  153 (270)
T ss_dssp             HSC--CCEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHH--CCTTCHH
T ss_pred             cCC--CCEEEECCCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccC--CCCCCcc
Confidence            875  5599999998643 2457889999999999999999999999999999765 59999999998887  6678899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      |++||+|+++|+++++.|++++||+||+|+||++.|++.+.
T Consensus       154 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~  194 (270)
T 1yde_A          154 YVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEE  194 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhh
Confidence            99999999999999999999999999999999999998754

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.2e-37  Score=255.39  Aligned_cols=183  Identities=23%  Similarity=0.361  Sum_probs=159.4

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      ++||+++||||++|||+++|++|+++|++|++++|+++++++.. ++      .++..+.+|++|.  +.++++.+.+++
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~------~~~~~~~~D~~~~--~~~~~~~~~~~~   74 (246)
T 2ag5_A            4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY------PGIQTRVLDVTKK--KQIDQFANEVER   74 (246)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS------TTEEEEECCTTCH--HHHHHHHHHCSC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc------cCceEEEeeCCCH--HHHHHHHHHhCC
Confidence            56999999999999999999999999999999999987665433 21      1577889999975  445566666664


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC-Cchhch
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP-LYSVYA  209 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~-~~~~Y~  209 (255)
                        +|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||..+..  +.+ +...|+
T Consensus        75 --id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~~Y~  148 (246)
T 2ag5_A           75 --LDVLFNVAGFVHH--GTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSV--KGVVNRCVYS  148 (246)
T ss_dssp             --CSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTT--BCCTTBHHHH
T ss_pred             --CCEEEECCccCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCc--CCCCCCccHH
Confidence              5699999998754  567889999999999999999999999999999888889999999998877  455 788999


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      +||+|+++|+++++.|++++||+||+|+||++.||+.+.
T Consensus       149 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  187 (246)
T 2ag5_A          149 TTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQE  187 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhh
Confidence            999999999999999999999999999999999998654

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=3.6e-37  Score=257.71  Aligned_cols=184  Identities=22%  Similarity=0.260  Sum_probs=158.4

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      ++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     ..++..+.+|++|.  +++.++++.+.+
T Consensus         4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (263)
T 2a4k_A            4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAVEAVFAEALEEF   78 (263)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----CSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            56899999999999999999999999999999999998877765544     24578899999973  566777777878


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++  +|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.| ++ .|+||++||..+.   +.++...|
T Consensus        79 g~--iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~---~~~~~~~Y  149 (263)
T 2a4k_A           79 GR--LHGVAHFAGVAHS--ALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL---GAFGLAHY  149 (263)
T ss_dssp             SC--CCEEEEGGGGTTT--TC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC---CHHHHHHH
T ss_pred             CC--CcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc---CCCCcHHH
Confidence            75  5599999998754  557889999999999999999999999999999 54 7999999999886   34667899


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++||+|+++|+++++.|++++||+||+|+||++.|++.+.
T Consensus       150 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  189 (263)
T 2a4k_A          150 AAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG  189 (263)
T ss_dssp             HHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhh
Confidence            9999999999999999999999999999999999999765

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=1.2e-37  Score=259.18  Aligned_cols=187  Identities=24%  Similarity=0.287  Sum_probs=151.8

Q ss_pred             cCCcccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHH
Q 025260           44 RPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGV  121 (255)
Q Consensus        44 ~~~~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~  121 (255)
                      .|....++++|+++||||++|||+++|++|+++|++|++++|+.++++             .+..+.+|++|.  +++.+
T Consensus        12 ~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~Dl~d~~~v~~~~   78 (253)
T 2nm0_A           12 SGLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-------------GFLAVKCDITDTEQVEQAY   78 (253)
T ss_dssp             --------CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-------------TSEEEECCTTSHHHHHHHH
T ss_pred             CCCCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-------------cceEEEecCCCHHHHHHHH
Confidence            344455677999999999999999999999999999999999876532             156788999973  46667


Q ss_pred             HHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCC
Q 025260          122 ERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS  201 (255)
Q Consensus       122 ~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~  201 (255)
                      +++.+.+++  +|+||||||+...  .++.+.+.++|++.+++|+.+++.++++++|.|++++.|+||++||..+..  +
T Consensus        79 ~~~~~~~g~--iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~--~  152 (253)
T 2nm0_A           79 KEIEETHGP--VEVLIANAGVTKD--QLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLL--G  152 (253)
T ss_dssp             HHHHHHTCS--CSEEEEECSCCTT--TC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCC--C
T ss_pred             HHHHHHcCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC--C
Confidence            777777775  5599999998743  557788899999999999999999999999999888889999999999887  6


Q ss_pred             CCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       202 ~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .++...|++||+|+++|+++++.|++++||+||+|+||+++|++.+.+
T Consensus       153 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~  200 (253)
T 2nm0_A          153 SAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVL  200 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC------
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc
Confidence            677889999999999999999999999999999999999999997653

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=2.2e-36  Score=255.67  Aligned_cols=190  Identities=20%  Similarity=0.203  Sum_probs=161.7

Q ss_pred             cCCcEEEEECCC--CchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           51 KYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        51 ~~gk~vlITGas--~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      ++||+++||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..+.  +..+.+|++|  ++++.++++.+
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~--~~~~~~Dl~~~~~v~~~~~~~~~   95 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGS--DLVVKCDVSLDEDIKNLKKFLEE   95 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTC--CCEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCC--eEEEEcCCCCHHHHHHHHHHHHH
Confidence            679999999999  99999999999999999999999985 55556666554333  5678899997  35667777777


Q ss_pred             HhcCCCccEEEEecCCCCCc--ccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          127 AIEGLDVGVLINNVGISYPY--ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                      .+++  +|+||||||+....  ..++.+.+.++|++.+++|+.|+++++++++|.|+++ +|+||++||..+..  +.++
T Consensus        96 ~~g~--iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~  170 (285)
T 2p91_A           96 NWGS--LDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEK--VVPH  170 (285)
T ss_dssp             HTSC--CCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGTS--BCTT
T ss_pred             HcCC--CCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhcc--CCCC
Confidence            7775  55999999986421  1457788999999999999999999999999999754 69999999998887  6678


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ...|++||+|+++|+++++.|++++||+||+|+||++.|++.+.
T Consensus       171 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  214 (285)
T 2p91_A          171 YNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYS  214 (285)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhc
Confidence            89999999999999999999999999999999999999998754

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=3.3e-36  Score=248.64  Aligned_cols=189  Identities=22%  Similarity=0.242  Sum_probs=168.2

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCC-------cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHH
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGL-------NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVER  123 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~-------~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~  123 (255)
                      +|+++||||++|||++++++|+++|+       +|++++|+.+++++..+++.+.  +.++..+.+|++|.  +++.+++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~   79 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTTH   79 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc--CCeeeEEEecCCCHHHHHHHHHH
Confidence            78999999999999999999999999       9999999998888888777653  45688899999973  4666677


Q ss_pred             HHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC
Q 025260          124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP  203 (255)
Q Consensus       124 ~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~  203 (255)
                      +.+.+++  +|+||||||....  .++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..  +.+
T Consensus        80 ~~~~~g~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--~~~  153 (244)
T 2bd0_A           80 IVERYGH--IDCLVNNAGVGRF--GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK--AFR  153 (244)
T ss_dssp             HHHHTSC--CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCT
T ss_pred             HHHhCCC--CCEEEEcCCcCCc--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcC--CCC
Confidence            7777764  5699999998743  557788999999999999999999999999999888889999999999887  678


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      +...|++||+|+++|+++++.|+.++||+|++++||++.||+.+..
T Consensus       154 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  199 (244)
T 2bd0_A          154 HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV  199 (244)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhc
Confidence            8899999999999999999999999999999999999999997653

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=1e-36  Score=252.14  Aligned_cols=181  Identities=12%  Similarity=0.051  Sum_probs=157.1

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEE-e--CChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLV-G--RNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      ||+++||||++|||+++|++|+++|++|+++ +  |+++++++..+++ .   +.++.     ..+++++.++++.+.++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-~---~~~~~-----~~~~v~~~~~~~~~~~g   71 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-P---GTIAL-----AEQKPERLVDATLQHGE   71 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-T---TEEEC-----CCCCGGGHHHHHGGGSS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-C---CCccc-----CHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999999 6  9998887776655 1   22221     34467788888888776


Q ss_pred             CCCccEEEEecCCCCCc-ccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          130 GLDVGVLINNVGISYPY-ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                        ++|+||||||+.... ..++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+..  +.++...|
T Consensus        72 --~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~--~~~~~~~Y  147 (244)
T 1zmo_A           72 --AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKK--PLAYNPLY  147 (244)
T ss_dssp             --CEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS--CCTTCTTH
T ss_pred             --CCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCC--CCCCchHH
Confidence              577999999986420 0457889999999999999999999999999999988889999999999988  67888999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                      ++||+|+++|+++++.|++++||+||+|+||+++|+|.
T Consensus       148 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  185 (244)
T 1zmo_A          148 GPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTY  185 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTT
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcc
Confidence            99999999999999999999999999999999999998

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=3e-36  Score=248.51  Aligned_cols=181  Identities=23%  Similarity=0.294  Sum_probs=159.3

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC-CcHHHHHHHHHHhcCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG-DLDEGVERIKEAIEGL  131 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~  131 (255)
                      +|+++||||++|||+++|++|+++|++|++++|++++.   .+++     +  +..+.+|+++ ++++.++++.+.+++ 
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~-----~--~~~~~~D~~~~~~~~~~~~~~~~~g~-   70 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA---AQSL-----G--AVPLPTDLEKDDPKGLVKRALEALGG-   70 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHH-----T--CEEEECCTTTSCHHHHHHHHHHHHTS-
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHhh-----C--cEEEecCCchHHHHHHHHHHHHHcCC-
Confidence            68999999999999999999999999999999997652   2232     2  5677889886 457777888888875 


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC--CCchhch
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD--PLYSVYA  209 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~--~~~~~Y~  209 (255)
                       +|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..  +.  ++...|+
T Consensus        71 -id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~~~Y~  145 (239)
T 2ekp_A           71 -LHVLVHAAAVNVR--KPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFT--AGGPVPIPAYT  145 (239)
T ss_dssp             -CCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTSCCHHHH
T ss_pred             -CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcc--CCCCCCCccHH
Confidence             5599999998753  567889999999999999999999999999999888889999999999887  55  7789999


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      +||+|+++|+++++.|++++||+||+|+||++.|++.+..
T Consensus       146 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  185 (239)
T 2ekp_A          146 TAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPL  185 (239)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhcc
Confidence            9999999999999999999999999999999999997643

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=2.2e-36  Score=253.91  Aligned_cols=190  Identities=25%  Similarity=0.295  Sum_probs=161.7

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEE-eCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHh
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAI  128 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~  128 (255)
                      ++|+++||||++|||+++|++|+++|++|++. +|+.+.+++..+++.+.  +.++..+.+|++|  ++++.++++.+.+
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES--GGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            47999999999999999999999999999886 78888888888887765  4578899999997  3567778888888


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC---CCcEEEEECCccccccCCCC-C
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR---KKGAIVNIGSGAAIVIPSDP-L  204 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~---~~g~iv~vsS~~~~~~~~~~-~  204 (255)
                      ++  +|+||||||+... ..++.+.+.++|++.+++|+.|++++++.++|.|.++   +.|+||++||.++..  +.+ .
T Consensus       103 g~--id~li~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~  177 (272)
T 4e3z_A          103 GR--LDGLVNNAGIVDY-PQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAIL--GSATQ  177 (272)
T ss_dssp             SC--CCEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHH--CCTTT
T ss_pred             CC--CCEEEECCCCCCC-CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhcc--CCCCC
Confidence            75  5599999998753 2567889999999999999999999999999999763   478999999999887  434 6


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ...|++||+|+++|+++++.|++++||+|++|+||+++|++.+.
T Consensus       178 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  221 (272)
T 4e3z_A          178 YVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHAS  221 (272)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccc
Confidence            78899999999999999999999999999999999999998764

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=2.9e-37  Score=255.92  Aligned_cols=182  Identities=25%  Similarity=0.287  Sum_probs=152.7

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK  125 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~  125 (255)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+++++++.             ..+.+|++|.  +++.++++.
T Consensus        10 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-------------~~~~~D~~~~~~~~~~~~~~~   76 (247)
T 1uzm_A           10 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL-------------FGVEVDVTDSDAVDRAFTAVE   76 (247)
T ss_dssp             CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS-------------EEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHh-------------cCeeccCCCHHHHHHHHHHHH
Confidence            3456799999999999999999999999999999999987654321             1378899873  466777777


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCc
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~  205 (255)
                      +.+++  +|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+..  +.++.
T Consensus        77 ~~~g~--id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~  150 (247)
T 1uzm_A           77 EHQGP--VEVLVSNAGLSAD--AFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW--GIGNQ  150 (247)
T ss_dssp             HHHSS--CSEEEEECSCCC-------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-------CC
T ss_pred             HHcCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhcc--CCCCC
Confidence            77775  5599999998753  557889999999999999999999999999999988889999999999887  66788


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ..|++||+|+++|+++++.|++++||+||+|+||+++|++.+.
T Consensus       151 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  193 (247)
T 1uzm_A          151 ANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA  193 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhh
Confidence            9999999999999999999999999999999999999998654

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-36  Score=255.05  Aligned_cols=195  Identities=16%  Similarity=0.149  Sum_probs=159.6

Q ss_pred             cccccCCcEEEEECCC--CchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHH
Q 025260           47 KNLRKYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVE  122 (255)
Q Consensus        47 ~~~~~~gk~vlITGas--~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~  122 (255)
                      ...++++|+++||||+  +|||+++|++|+++|++|++++|+... .+..+++.+..+  .+..+.+|++|  ++++.++
T Consensus         8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~   84 (271)
T 3ek2_A            8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITEFAAEFG--SELVFPCDVADDAQIDALFA   84 (271)
T ss_dssp             -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHH
T ss_pred             CccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhh-HHHHHHHHHHcC--CcEEEECCCCCHHHHHHHHH
Confidence            4445779999999999  999999999999999999999999554 344455554443  36788999998  3566777


Q ss_pred             HHHHHhcCCCccEEEEecCCCCCc--cccccc-CCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc
Q 025260          123 RIKEAIEGLDVGVLINNVGISYPY--ARFFHE-VDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI  199 (255)
Q Consensus       123 ~~~~~~~~~~id~lv~nag~~~~~--~~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~  199 (255)
                      ++.+.++  ++|+||||||+....  ..++.+ .+.++|++.+++|+.++++++++++|.|++  .|+||++||.++.. 
T Consensus        85 ~~~~~~g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~-  159 (271)
T 3ek2_A           85 SLKTHWD--SLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAER-  159 (271)
T ss_dssp             HHHHHCS--CEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEECGGGTS-
T ss_pred             HHHHHcC--CCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEecccccc-
Confidence            7777776  577999999987531  033445 899999999999999999999999999864  58999999999988 


Q ss_pred             CCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          200 PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       200 ~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                       +.++...|++||+|+++|+++++.|++++||+||+|+||+++|+|.+...
T Consensus       160 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~  209 (271)
T 3ek2_A          160 -AIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIK  209 (271)
T ss_dssp             -BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCH
T ss_pred             -CCCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhccc
Confidence             77889999999999999999999999999999999999999999987643

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=1.7e-36  Score=251.72  Aligned_cols=182  Identities=21%  Similarity=0.246  Sum_probs=153.9

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      ++++||+++||||++|||++++++|+++|++|++++|+.+.         +..   .+..+.+|++|.  +++.++++.+
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---------~~~---~~~~~~~D~~d~~~~~~~~~~~~~   70 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ---------EQY---PFATEVMDVADAAQVAQVCQRLLA   70 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS---------SCC---SSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh---------hcC---CceEEEcCCCCHHHHHHHHHHHHH
Confidence            34679999999999999999999999999999999998652         111   156788999973  4666677777


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .+++  +|+||||||+...  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..  +.++..
T Consensus        71 ~~g~--id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~--~~~~~~  144 (250)
T 2fwm_X           71 ETER--LDALVNAAGILRM--GATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHT--PRIGMS  144 (250)
T ss_dssp             HCSC--CCEEEECCCCCCC--CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS--CCTTCH
T ss_pred             HcCC--CCEEEECCCcCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC--CCCCCc
Confidence            7764  5599999998753  567889999999999999999999999999999888889999999999987  678889


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      .|++||+|+++|+++++.|++++||+||+|+||++.|++.+.
T Consensus       145 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  186 (250)
T 2fwm_X          145 AYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRT  186 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------
T ss_pred             hHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccc
Confidence            999999999999999999999999999999999999998764

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=8e-36  Score=248.46  Aligned_cols=193  Identities=24%  Similarity=0.330  Sum_probs=169.4

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK  125 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~  125 (255)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++++.  +.++..+.+|++|.  +++.++++.
T Consensus         8 ~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   85 (260)
T 3awd_A            8 KLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME--GHDVSSVVMDVTNTESVQNAVRSVH   85 (260)
T ss_dssp             GGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHH
Confidence            45677999999999999999999999999999999999998888888887664  34678899999973  456677777


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCc
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~  205 (255)
                      +.+++  +|+||||||+... ..++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..  +.+..
T Consensus        86 ~~~~~--id~vi~~Ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~  160 (260)
T 3awd_A           86 EQEGR--VDILVACAGICIS-EVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLI--VNRPQ  160 (260)
T ss_dssp             HHHSC--CCEEEECCCCCCC-SCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCSSS
T ss_pred             HHcCC--CCEEEECCCCCCC-CCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcc--cCCCC
Confidence            77774  5599999998652 2457788999999999999999999999999999887889999999998877  45555


Q ss_pred             --hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          206 --SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       206 --~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                        ..|++||++++.|+++++.|++++||+|++++||++.|++.+
T Consensus       161 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~  204 (260)
T 3awd_A          161 QQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTR  204 (260)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTH
T ss_pred             CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhh
Confidence              899999999999999999999999999999999999999987

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=3.7e-36  Score=253.63  Aligned_cols=189  Identities=19%  Similarity=0.216  Sum_probs=161.3

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++..+.+|++|.  +++.++.+ +
T Consensus        26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~-~   99 (281)
T 3ppi_A           26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-----GNRAEFVSTNVTSEDSVLAAIEAA-N   99 (281)
T ss_dssp             GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHH-T
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHH-H
Confidence            3577999999999999999999999999999999999999988887776     34688999999984  23333433 3


Q ss_pred             HhcCCCccEEEEe-cCCCCCccccc-----ccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhh------CCCcEEEEECCc
Q 025260          127 AIEGLDVGVLINN-VGISYPYARFF-----HEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK------RKKGAIVNIGSG  194 (255)
Q Consensus       127 ~~~~~~id~lv~n-ag~~~~~~~~~-----~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~------~~~g~iv~vsS~  194 (255)
                      .++  ++|++||| ||....  ..+     .+.+.++|++.+++|+.+++++++.++|.|.+      +++|+||++||.
T Consensus       100 ~~~--~id~lv~~aag~~~~--~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~  175 (281)
T 3ppi_A          100 QLG--RLRYAVVAHGGFGVA--QRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASI  175 (281)
T ss_dssp             TSS--EEEEEEECCCCCCCC--CCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCG
T ss_pred             HhC--CCCeEEEccCccccc--ccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecc
Confidence            333  57899999 555432  222     46889999999999999999999999999976      567899999999


Q ss_pred             cccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          195 AAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       195 ~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .+..  +.++...|++||+|+++|+++|+.|++++||+||+|+||+++|++.+..
T Consensus       176 ~~~~--~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  228 (281)
T 3ppi_A          176 AGYE--GQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV  228 (281)
T ss_dssp             GGTS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT
T ss_pred             cccC--CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc
Confidence            9988  7788999999999999999999999999999999999999999987654

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=6.5e-36  Score=249.26  Aligned_cols=191  Identities=23%  Similarity=0.299  Sum_probs=168.8

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeC-ChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      ++||+++||||++|||++++++|+++|++|++++| +.+.+++..+++.+.  +.++..+.+|++|.  +++.++++.+.
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (261)
T 1gee_A            5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            56999999999999999999999999999999999 888888877777654  34678899999973  46667777777


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCch
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      +++  +|+||||||....  .++.+.+.++|++.+++|+.+++.++++++|.|++++ .|+||++||..+..  +.++..
T Consensus        83 ~g~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~  156 (261)
T 1gee_A           83 FGK--LDVMINNAGLENP--VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI--PWPLFV  156 (261)
T ss_dssp             HSC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS--CCTTCH
T ss_pred             cCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC--CCCCcc
Confidence            775  5599999998753  4577889999999999999999999999999998877 79999999998887  678889


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .|++||+|++.|+++++.|+.++||+|++++||++.|++.+..
T Consensus       157 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  199 (261)
T 1gee_A          157 HYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEK  199 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhc
Confidence            9999999999999999999999999999999999999997654

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=3.4e-36  Score=251.74  Aligned_cols=195  Identities=24%  Similarity=0.271  Sum_probs=154.9

Q ss_pred             cccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHH
Q 025260           47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI  124 (255)
Q Consensus        47 ~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~  124 (255)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+++++++..+++.+.  +.++..+.+|+++.  +++.++++
T Consensus         8 ~~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   85 (266)
T 1xq1_A            8 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQTV   85 (266)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHH
Confidence            345677999999999999999999999999999999999999888888887664  34578889999973  46667777


Q ss_pred             HHHh-cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC
Q 025260          125 KEAI-EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP  203 (255)
Q Consensus       125 ~~~~-~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~  203 (255)
                      .+.+ +  ++|+||||||....  .++.+.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..  +.+
T Consensus        86 ~~~~~~--~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--~~~  159 (266)
T 1xq1_A           86 SSMFGG--KLDILINNLGAIRS--KPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV--SAS  159 (266)
T ss_dssp             HHHHTT--CCSEEEEECCC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-----------
T ss_pred             HHHhCC--CCcEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcc--CCC
Confidence            7777 5  46699999998643  457788999999999999999999999999999888889999999999887  667


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ....|++||++++.|+++++.|++++||+|++++||++.|++.+..
T Consensus       160 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  205 (266)
T 1xq1_A          160 VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV  205 (266)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhh
Confidence            7889999999999999999999999999999999999999987653

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=6.3e-37  Score=263.86  Aligned_cols=192  Identities=23%  Similarity=0.292  Sum_probs=156.1

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhh----cCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAK----YAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      +||+++||||++|||+++|++|+++|++|++++|+.+.+++..+.+.+.    ..+.++..+.+|++|.  +.++++.+.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~--~~v~~~~~~   78 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDS--KSVAAARER   78 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCH--HHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCH--HHHHHHHHH
Confidence            3799999999999999999999999999999888765544433333321    1235688899999985  334444443


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ....++|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||..+..  +.+....
T Consensus        79 ~~~g~iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~--~~~~~~~  154 (327)
T 1jtv_A           79 VTEGRVDVLVCNAGLGLL--GPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM--GLPFNDV  154 (327)
T ss_dssp             CTTSCCSEEEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTS--CCTTCHH
T ss_pred             HhcCCCCEEEECCCcCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCccccc--CCCCChH
Confidence            322357899999998643  567889999999999999999999999999999888889999999999988  6788899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |++||+|+++|+++|+.|+.++||+||+|+||+|+|+|.+..
T Consensus       155 Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~  196 (327)
T 1jtv_A          155 YCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKV  196 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhh
Confidence            999999999999999999999999999999999999997653

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=2.9e-36  Score=254.32  Aligned_cols=192  Identities=14%  Similarity=0.161  Sum_probs=164.5

Q ss_pred             ccCCcEEEEECCC--CchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHH
Q 025260           50 RKYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIK  125 (255)
Q Consensus        50 ~~~gk~vlITGas--~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~  125 (255)
                      .++||+++||||+  +|||+++|++|+++|++|++++|+.  .++..+++.+.++  .+..+.+|++|  ++++.++++.
T Consensus        23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~   98 (280)
T 3nrc_A           23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFN--PAAVLPCDVISDQEIKDLFVELG   98 (280)
T ss_dssp             TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGC--CSEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcC--CceEEEeecCCHHHHHHHHHHHH
Confidence            3679999999998  7899999999999999999999997  4455666666554  36788999997  3567777787


Q ss_pred             HHhcCCCccEEEEecCCCCCc--cccccc-CCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC
Q 025260          126 EAIEGLDVGVLINNVGISYPY--ARFFHE-VDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD  202 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~--~~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~  202 (255)
                      +.+++  +|+||||||+....  ..++.+ .+.++|++.+++|+.++++++++++|.|+++ .|+||++||.++..  +.
T Consensus        99 ~~~g~--id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~--~~  173 (280)
T 3nrc_A           99 KVWDG--LDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEK--AM  173 (280)
T ss_dssp             HHCSS--CCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTS--CC
T ss_pred             HHcCC--CCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEecccccc--CC
Confidence            77775  55999999987531  133445 8999999999999999999999999998765 79999999999988  77


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      ++...|++||+|+++|+++|+.|++++||+||+|+||+++|++.+...
T Consensus       174 ~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~  221 (280)
T 3nrc_A          174 PSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGIS  221 (280)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCT
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCc
Confidence            889999999999999999999999999999999999999999987654

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=2.7e-36  Score=251.04  Aligned_cols=183  Identities=19%  Similarity=0.135  Sum_probs=159.4

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      |+++||||++|||+++|++|+++|++|++++|+.+++++..+ +.+.+..  +..+  | .+++++.++++.+.+++  +
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~--~~~~--d-~~~v~~~~~~~~~~~g~--i   73 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQ--LKPM--S-EQEPAELIEAVTSAYGQ--V   73 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTT--SEEC--C-CCSHHHHHHHHHHHHSC--C
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCc--EEEE--C-HHHHHHHHHHHHHHhCC--C
Confidence            689999999999999999999999999999999988877665 6554332  2222  3 44678888999988885  5


Q ss_pred             cEEEEecCCC-CCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHHH
Q 025260          134 GVLINNVGIS-YPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATK  212 (255)
Q Consensus       134 d~lv~nag~~-~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~asK  212 (255)
                      |+||||||+. ..  .++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..  +.++...|++||
T Consensus        74 D~lv~nAg~~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~Y~~sK  149 (254)
T 1zmt_A           74 DVLVSNDIFAPEF--QPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFG--PWKELSTYTSAR  149 (254)
T ss_dssp             CEEEEECCCCCCC--CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTS--CCTTCHHHHHHH
T ss_pred             CEEEECCCcCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCccccc--CCCCchHHHHHH
Confidence            5999999986 33  457889999999999999999999999999999888889999999999988  678889999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEeeeeee---------eeCCcch
Q 025260          213 AYIDQFSRSLYVEYRKSGIDVQCQVLFLL---------CFYNLND  248 (255)
Q Consensus       213 ~al~~~~~~l~~e~~~~gi~v~~v~Pg~v---------~T~~~~~  248 (255)
                      +|+++|+++++.|++++||+||+|+||++         +|++.+.
T Consensus       150 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~  194 (254)
T 1zmt_A          150 AGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKT  194 (254)
T ss_dssp             HHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTT
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCccccc
Confidence            99999999999999999999999999999         8887653

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=3.3e-36  Score=254.55  Aligned_cols=192  Identities=23%  Similarity=0.311  Sum_probs=165.6

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      ++++|+++||||++|||+++|++|+++|++|++.+|+++++++..+++.+.  +.++..+.+|++|.  +++.++++.+.
T Consensus        41 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~  118 (285)
T 2c07_A           41 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKILTE  118 (285)
T ss_dssp             CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCceeEEECCCCCHHHHHHHHHHHHHh
Confidence            467999999999999999999999999999999999998888888887654  34678899999973  45666666666


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|+||||||+...  .++.+.+.++|++.+++|+.|++++++.++|.|++++.|+||++||..+..  +.++...
T Consensus       119 ~~~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~~  192 (285)
T 2c07_A          119 HKN--VDILVNNAGITRD--NLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLT--GNVGQAN  192 (285)
T ss_dssp             CSC--CCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH--CCTTCHH
T ss_pred             cCC--CCEEEECCCCCCC--CchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhcc--CCCCCch
Confidence            664  5699999998754  557888999999999999999999999999999887789999999998887  6688899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |++||+|+++|+++++.|+.+.||+|++++||++.|++.+..
T Consensus       193 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  234 (285)
T 2c07_A          193 YSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI  234 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhc
Confidence            999999999999999999999999999999999999987653

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=5e-36  Score=250.40  Aligned_cols=191  Identities=21%  Similarity=0.197  Sum_probs=162.8

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK  125 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~  125 (255)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++     +.++..+.+|++|.  +++.++++.
T Consensus         7 ~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~   81 (265)
T 2o23_A            7 CRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAK   81 (265)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            34567999999999999999999999999999999999998888776665     34578899999973  566777777


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccc------cCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC------CCcEEEEECC
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFH------EVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR------KKGAIVNIGS  193 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~------~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~------~~g~iv~vsS  193 (255)
                      +.+++  +|+||||||....  .++.      +.+.++|++.+++|+.+++.++++++|.|+++      +.++||++||
T Consensus        82 ~~~g~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS  157 (265)
T 2o23_A           82 GKFGR--VDVAVNCAGIAVA--SKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTAS  157 (265)
T ss_dssp             HHHSC--CCEEEECCCCCCC--CCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECC
T ss_pred             HHCCC--CCEEEECCccCCC--CccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCC
Confidence            77775  5599999998653  2232      47889999999999999999999999999887      6799999999


Q ss_pred             ccccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          194 GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       194 ~~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ..+..  +.++...|++||+|+++|+++++.|+.++||+|++|+||++.|++.+..
T Consensus       158 ~~~~~--~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  211 (265)
T 2o23_A          158 VAAFE--GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL  211 (265)
T ss_dssp             THHHH--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----
T ss_pred             hhhcC--CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcccccc
Confidence            99887  6788899999999999999999999999999999999999999997653

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-36  Score=250.33  Aligned_cols=181  Identities=25%  Similarity=0.296  Sum_probs=152.9

Q ss_pred             cccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHH
Q 025260           47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKE  126 (255)
Q Consensus        47 ~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  126 (255)
                      ....++||+++||||++|||+++|++|+++|++|++++|+++..+    ++     + ....+ +|+.+++++    +.+
T Consensus        13 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~-----~-~~~~~-~D~~~~~~~----~~~   77 (249)
T 1o5i_A           13 MELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RS-----G-HRYVV-CDLRKDLDL----LFE   77 (249)
T ss_dssp             ---CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HT-----C-SEEEE-CCTTTCHHH----HHH
T ss_pred             HHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----hh-----C-CeEEE-eeHHHHHHH----HHH
Confidence            344578999999999999999999999999999999999974322    21     1 35556 888434333    334


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .+.  ++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.|+||++||..+..  +.++..
T Consensus        78 ~~~--~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~  151 (249)
T 1o5i_A           78 KVK--EVDILVLNAGGPKA--GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS--PIENLY  151 (249)
T ss_dssp             HSC--CCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTBH
T ss_pred             Hhc--CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcC--CCCCCc
Confidence            443  57799999998643  567889999999999999999999999999999888889999999999988  678889


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      .|++||+|+++|+++++.|++++||+||+|+||++.|++.+.
T Consensus       152 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  193 (249)
T 1o5i_A          152 TSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE  193 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccc
Confidence            999999999999999999999999999999999999999754

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=9.8e-36  Score=250.27  Aligned_cols=195  Identities=25%  Similarity=0.311  Sum_probs=168.8

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK  125 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~  125 (255)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.+..++..+++..   ..++..+.+|++|.  +++.++++.
T Consensus        11 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   87 (278)
T 2bgk_A           11 TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDTTI   87 (278)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC---CCceEEEECCCCCHHHHHHHHHHHH
Confidence            3456799999999999999999999999999999999998877766665532   23688899999973  566777777


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC-C
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP-L  204 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~-~  204 (255)
                      +.+++  +|+||||||.......++.+.+.++|++.+++|+.++++++++++|.|++++.|+||++||..+..  +.+ +
T Consensus        88 ~~~~~--id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~  163 (278)
T 2bgk_A           88 AKHGK--LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFT--AGEGV  163 (278)
T ss_dssp             HHHSC--CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTC--CCTTS
T ss_pred             HHcCC--CCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccC--CCCCC
Confidence            77775  559999999875433567788999999999999999999999999999888889999999999887  556 6


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ...|++||+++++|+++++.|++++||++++++||++.|++.+..
T Consensus       164 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  208 (278)
T 2bgk_A          164 SHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDV  208 (278)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTS
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhh
Confidence            789999999999999999999999999999999999999987653

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=2.4e-36  Score=254.12  Aligned_cols=190  Identities=15%  Similarity=0.160  Sum_probs=162.7

Q ss_pred             cCCcEEEEECCC--CchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           51 KYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        51 ~~gk~vlITGas--~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      ++||+++||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..+.  +..+.+|++|.  +++.++++.+
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~--~~~~~~D~~~~~~v~~~~~~~~~   80 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNS--PYVYELDVSKEEHFKSLYNSVKK   80 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTC--CCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCC--cEEEEcCCCCHHHHHHHHHHHHH
Confidence            458999999999  99999999999999999999999986 55566666554332  57788999973  4666677777


Q ss_pred             HhcCCCccEEEEecCCCCCc--ccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          127 AIEGLDVGVLINNVGISYPY--ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                      .++  ++|+||||||+....  ..++.+.+.++|++.+++|+.++++++++++|.|++  +|+||++||..+..  +.++
T Consensus        81 ~~g--~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~--~~~~  154 (275)
T 2pd4_A           81 DLG--SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTK--YMAH  154 (275)
T ss_dssp             HTS--CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTS--BCTT
T ss_pred             HcC--CCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchhcC--CCCC
Confidence            776  577999999986421  145778899999999999999999999999999964  48999999998887  6688


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ...|++||+|+++|+++++.|++++||+||+|+||+++|++.+..
T Consensus       155 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  199 (275)
T 2pd4_A          155 YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGI  199 (275)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGS
T ss_pred             chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhc
Confidence            899999999999999999999999999999999999999997653

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=2.9e-36  Score=252.30  Aligned_cols=180  Identities=18%  Similarity=0.261  Sum_probs=159.8

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+.++             ..++..+.+|++|.  +++.++++.+.
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~   71 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-------------EAKYDHIECDVTNPDQVKASIDHIFKE   71 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-------------SCSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-------------CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            3569999999999999999999999999999999998764             23467788999973  56677778887


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+..  +.++...
T Consensus        72 ~g~--iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~  145 (264)
T 2dtx_A           72 YGS--ISVLVNNAGIESY--GKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASI--ITKNASA  145 (264)
T ss_dssp             HSC--CCEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTS--CCTTBHH
T ss_pred             cCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhcc--CCCCchh
Confidence            875  5599999998754  567889999999999999999999999999999888889999999999887  6788899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |++||+|+++|+++++.|+.+. |+||+|+||+++|++.+..
T Consensus       146 Y~~sK~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~  186 (264)
T 2dtx_A          146 YVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKA  186 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhh
Confidence            9999999999999999999988 9999999999999987654

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=7.9e-36  Score=247.13  Aligned_cols=189  Identities=26%  Similarity=0.347  Sum_probs=166.2

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~  130 (255)
                      +|+++||||++|||++++++|+++|++|++++|+.+++++..+++.+.. +.++..+.+|++|.  +++.++++.+.+++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAY-ADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTT-GGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            7899999999999999999999999999999999988888777762221 34688899999973  46677777777775


Q ss_pred             CCccEEEEecCCCCCcccc---cccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          131 LDVGVLINNVGISYPYARF---FHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~---~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                        +|+||||||....  .+   +.+.+.+++++.+++|+.+++.+++.++|.|++++.++||++||..+..  +.++...
T Consensus        81 --id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~~  154 (250)
T 2cfc_A           81 --IDVLVNNAGITGN--SEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLV--AFPGRSA  154 (250)
T ss_dssp             --CCEEEECCCCCCC--TTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTCHH
T ss_pred             --CCEEEECCCCCCC--CCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhcc--CCCCchh
Confidence              5599999998643  33   6788999999999999999999999999999888889999999999887  6788899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      |++||+|++.|+++++.|+.++||+|++++||++.|++.+.
T Consensus       155 Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~  195 (250)
T 2cfc_A          155 YTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQW  195 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCcccc
Confidence            99999999999999999999999999999999999999765

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=7.5e-36  Score=245.09  Aligned_cols=185  Identities=21%  Similarity=0.275  Sum_probs=155.5

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhc
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE  129 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~  129 (255)
                      .+|+++||||++|||++++++|+++|++|++++|+.+++++..+++.      ++..+.+|++|.  +++.++++.+.++
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE------GALPLPGDVREEGDWARAVAAMEEAFG   77 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST------TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh------hceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999999887776655431      467788999973  4566677777777


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhch
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA  209 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~  209 (255)
                      +  +|++|||||....  .++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..  +.++...|+
T Consensus        78 ~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~~Y~  151 (234)
T 2ehd_A           78 E--LSALVNNAGVGVM--KPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKN--PFKGGAAYN  151 (234)
T ss_dssp             C--CCEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTS--CCTTCHHHH
T ss_pred             C--CCEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcC--CCCCCchhh
Confidence            4  5599999998643  557888999999999999999999999999999888889999999999887  667889999


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      +||+|+++++++++.|+.++||++++++||++.|++.+.
T Consensus       152 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  190 (234)
T 2ehd_A          152 ASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGN  190 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEECC---------
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccc
Confidence            999999999999999999999999999999999998764

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=6.8e-36  Score=247.09  Aligned_cols=194  Identities=29%  Similarity=0.429  Sum_probs=169.4

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++.+.. +.++..+.+|++|.  +++.++++.+
T Consensus         3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (248)
T 2pnf_A            3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY-GVKAHGVEMNLLSEESINKAFEEIYN   81 (248)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhc-CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            34679999999999999999999999999999999999988888877776532 34678899999973  4566677777


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .+++  +|++|||||....  .++.+.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+..  +.++..
T Consensus        82 ~~~~--~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~  155 (248)
T 2pnf_A           82 LVDG--IDILVNNAGITRD--KLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFT--GNVGQV  155 (248)
T ss_dssp             HSSC--CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHH--CCTTCH
T ss_pred             hcCC--CCEEEECCCCCCC--CccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcC--CCCCCc
Confidence            7664  5699999998754  457788999999999999999999999999999888889999999988877  667789


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .|++||+++++++++++.|+.+.||++++++||++.|++.+.+
T Consensus       156 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~  198 (248)
T 2pnf_A          156 NYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL  198 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc
Confidence            9999999999999999999999999999999999999987643

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=2e-36  Score=250.31  Aligned_cols=179  Identities=19%  Similarity=0.231  Sum_probs=155.5

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHH-cCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAK-TGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~-~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      ++|+++||||++|||+++|++|++ .|++|++.+|+++..            ...+..+.+|++|.  +.++++.+....
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~------------~~~~~~~~~Dv~~~--~~v~~~~~~~~~   68 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS------------AENLKFIKADLTKQ--QDITNVLDIIKN   68 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC------------CTTEEEEECCTTCH--HHHHHHHHHTTT
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc------------cccceEEecCcCCH--HHHHHHHHHHHh
Confidence            589999999999999999999999 789999999986521            23468899999975  444444454444


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchH
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA  210 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~a  210 (255)
                      .++|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|+++  |+||++||..+..  +.++...|++
T Consensus        69 ~~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~--~~~~~~~Y~a  142 (244)
T 4e4y_A           69 VSFDGIFLNAGILIK--GSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFI--AKPNSFAYTL  142 (244)
T ss_dssp             CCEEEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGGTC--CCTTBHHHHH
T ss_pred             CCCCEEEECCccCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHHcc--CCCCCchhHH
Confidence            478899999999754  568899999999999999999999999999999654  8999999999988  7788999999


Q ss_pred             HHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          211 TKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       211 sK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      ||+|+++|+++|+.|++++||+||+|+||+++||+.+...
T Consensus       143 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~  182 (244)
T 4e4y_A          143 SKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLI  182 (244)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHH
Confidence            9999999999999999999999999999999999987653

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.4e-35  Score=248.47  Aligned_cols=194  Identities=24%  Similarity=0.289  Sum_probs=169.5

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+....+..+.+|++|.  +++.++++.+.
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  108 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ  108 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            3679999999999999999999999999999999999999888888887765456788899999973  46667777777


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCC--cEEEEECCccccccCCCCCc
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK--GAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~--g~iv~vsS~~~~~~~~~~~~  205 (255)
                      +++  +|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.  |+||++||..+....+.++.
T Consensus       109 ~g~--iD~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  184 (279)
T 1xg5_A          109 HSG--VDICINNAGLARP--DTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVT  184 (279)
T ss_dssp             HCC--CSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGG
T ss_pred             CCC--CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCC
Confidence            775  5599999998754  55778899999999999999999999999999988763  89999999988732256778


Q ss_pred             hhchHHHHHHHHHHHHHHHHHc--cCCceEEEeeeeeeeeCCcc
Q 025260          206 SVYAATKAYIDQFSRSLYVEYR--KSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~--~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      ..|++||+|+++|+++++.|+.  +.||+|++|+||++.|++..
T Consensus       185 ~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~  228 (279)
T 1xg5_A          185 HFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAF  228 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhh
Confidence            8999999999999999999998  88999999999999999853

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=5.1e-36  Score=257.26  Aligned_cols=188  Identities=23%  Similarity=0.305  Sum_probs=162.7

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEe---------CChhhHHHHHHHHHhhcCCceEEEEEEECCC--Cc
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG---------RNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DL  117 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~---------r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~  117 (255)
                      ++++||+++||||++|||+++|++|+++|++|++.+         |+.+++++..+++.+.+.  .   ..+|+++  ++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~--~---~~~D~~~~~~~   79 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG--K---AVANYDSVEAG   79 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC--E---EEEECCCGGGH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC--e---EEEeCCCHHHH
Confidence            557799999999999999999999999999999964         567778888888876532  2   2468776  34


Q ss_pred             HHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccc
Q 025260          118 DEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAI  197 (255)
Q Consensus       118 ~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~  197 (255)
                      ++.++++.+.+++  +|+||||||+...  .++.+.+.++|++.+++|+.|+++++++++|.|++++.|+||++||..+.
T Consensus        80 ~~~~~~~~~~~g~--iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~  155 (319)
T 1gz6_A           80 EKLVKTALDTFGR--IDVVVNNAGILRD--RSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGI  155 (319)
T ss_dssp             HHHHHHHHHHTSC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred             HHHHHHHHHHcCC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhc
Confidence            5677778877775  5599999998754  45778899999999999999999999999999998888999999999888


Q ss_pred             ccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          198 VIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       198 ~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      .  +.++...|++||+|+.+|+++|+.|+.++||+||+|+||++ |++.+.
T Consensus       156 ~--~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~  203 (319)
T 1gz6_A          156 Y--GNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTET  203 (319)
T ss_dssp             H--CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGG
T ss_pred             c--CCCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccc
Confidence            7  66788999999999999999999999999999999999998 888664

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=1.2e-35  Score=246.49  Aligned_cols=190  Identities=25%  Similarity=0.377  Sum_probs=164.6

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceE-EEEEEECCCC--cHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQI-KSVVVDFSGD--LDEGVERI  124 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~--~~~~~~~~  124 (255)
                      .+++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++ ..+.+|++|.  +++.++++
T Consensus         6 ~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~   80 (254)
T 2wsb_A            6 VFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL-----GAAVAARIVADVTDAEAMTAAAAEA   80 (254)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cccceeEEEEecCCHHHHHHHHHHH
Confidence            34577999999999999999999999999999999999998887776665     2345 7889999973  45555666


Q ss_pred             HHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                      .+ +++  +|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..  +.+.
T Consensus        81 ~~-~~~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~  153 (254)
T 2wsb_A           81 EA-VAP--VSILVNSAGIARL--HDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTI--VNRP  153 (254)
T ss_dssp             HH-HSC--CCEEEECCCCCCC--BCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCSS
T ss_pred             Hh-hCC--CcEEEECCccCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhcc--CCCC
Confidence            66 664  5699999998754  457788999999999999999999999999999888889999999998877  5565


Q ss_pred             c--hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          205 Y--SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       205 ~--~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .  ..|++||+|+++++++++.|+.++||++++++||++.|++.+..
T Consensus       154 ~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~  200 (254)
T 2wsb_A          154 QFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKM  200 (254)
T ss_dssp             SCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhcc
Confidence            6  89999999999999999999999999999999999999987643

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=5.2e-36  Score=250.27  Aligned_cols=190  Identities=20%  Similarity=0.194  Sum_probs=162.1

Q ss_pred             ccCCcEEEEECCC--CchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHH
Q 025260           50 RKYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK  125 (255)
Q Consensus        50 ~~~gk~vlITGas--~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~  125 (255)
                      +++||+++||||+  +|||+++|++|+++|++|++++|+++ .++..+++.+..+.  +..+.+|++|.  +++.++++.
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~--~~~~~~D~~~~~~v~~~~~~~~   81 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGG--ALLFRADVTQDEELDALFAGVK   81 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTC--CEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCC--cEEEECCCCCHHHHHHHHHHHH
Confidence            4669999999999  99999999999999999999999975 45555566554332  57889999973  466777777


Q ss_pred             HHhcCCCccEEEEecCCCCCc--ccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC
Q 025260          126 EAIEGLDVGVLINNVGISYPY--ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP  203 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~  203 (255)
                      +.++  ++|+||||||+....  ..++.+.+.++|++.+++|+.++++++++++|.|++  +|+||++||..+..  +.+
T Consensus        82 ~~~g--~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~--~~~  155 (261)
T 2wyu_A           82 EAFG--GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEK--VVP  155 (261)
T ss_dssp             HHHS--SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTS--BCT
T ss_pred             HHcC--CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccccC--CCC
Confidence            7777  467999999986420  145778899999999999999999999999999864  48999999998887  667


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      +...|++||+|+++|+++++.|++++||+||+|+||++.|++.+.
T Consensus       156 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  200 (261)
T 2wyu_A          156 KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARS  200 (261)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGG
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhh
Confidence            889999999999999999999999999999999999999998654

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=7.4e-36  Score=249.21  Aligned_cols=193  Identities=21%  Similarity=0.261  Sum_probs=163.9

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhc-----CCceEEEEEEECCCC--cHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKY-----AKTQIKSVVVDFSGD--LDEGVER  123 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~d~~~~--~~~~~~~  123 (255)
                      +++|+++||||++|||++++++|+++|++|++++|+.+++++..+++.+.+     +..++..+.+|++|.  +++.++.
T Consensus         5 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   84 (264)
T 2pd6_A            5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ   84 (264)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence            569999999999999999999999999999999999988887776664432     114577889999973  4667777


Q ss_pred             HHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCC
Q 025260          124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSD  202 (255)
Q Consensus       124 ~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~  202 (255)
                      +.+.++++ +|+||||||....  .++.+.+.++|++.+++|+.|+++++++++|.|.+++ .|+||++||..+..  +.
T Consensus        85 ~~~~~g~i-~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--~~  159 (264)
T 2pd6_A           85 VQACFSRP-PSVVVSCAGITQD--EFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV--GN  159 (264)
T ss_dssp             HHHHHSSC-CSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH--CC
T ss_pred             HHHHhCCC-CeEEEECCCcCCC--cchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc--CC
Confidence            77777754 1699999998754  5578889999999999999999999999999998776 78999999998887  67


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++...|++||+|+++|+++++.|+.++||++++++||++.|++.+.
T Consensus       160 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  205 (264)
T 2pd6_A          160 VGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK  205 (264)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC---
T ss_pred             CCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhh
Confidence            8889999999999999999999999999999999999999998764

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=1.1e-35  Score=246.42  Aligned_cols=190  Identities=24%  Similarity=0.316  Sum_probs=166.6

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      +++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++..   ..++..+.+|++|.  +++.++.+.+.+
T Consensus         4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (251)
T 1zk4_A            4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---cCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence            5699999999999999999999999999999999999888777666533   24678899999973  466777777777


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCC-cEEEEECCccccccCCCCCchh
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~-g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++  +|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|++++. ++||++||..+..  +.++...
T Consensus        81 ~~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~~  154 (251)
T 1zk4_A           81 GP--VSTLVNNAGIAVN--KSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV--GDPSLGA  154 (251)
T ss_dssp             SS--CCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS--CCTTCHH
T ss_pred             CC--CCEEEECCCCCCC--CChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhcc--CCCCCcc
Confidence            75  5599999998743  55778899999999999999999999999999988776 8999999999887  6788899


Q ss_pred             chHHHHHHHHHHHHHHHHHc--cCCceEEEeeeeeeeeCCcchh
Q 025260          208 YAATKAYIDQFSRSLYVEYR--KSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~--~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |++||++++.|+++++.|+.  +.||++++++||++.|++.+..
T Consensus       155 Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~  198 (251)
T 1zk4_A          155 YNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL  198 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS
T ss_pred             chHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc
Confidence            99999999999999999998  8899999999999999987643

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=8.4e-36  Score=246.09  Aligned_cols=189  Identities=26%  Similarity=0.345  Sum_probs=166.2

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEE-EeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhc
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE  129 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~  129 (255)
                      ||+++||||++|||++++++|+++|++|++ .+|++++.++..+++.+.  +.++..+.+|++|.  +++.++++.+.++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            689999999999999999999999999999 589988888887777654  34678889999973  4566677777666


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhch
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA  209 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~  209 (255)
                      +  +|++|||||....  .++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..  +.++...|+
T Consensus        79 ~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~Y~  152 (244)
T 1edo_A           79 T--IDVVVNNAGITRD--TLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI--GNIGQANYA  152 (244)
T ss_dssp             C--CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH--CCTTCHHHH
T ss_pred             C--CCEEEECCCCCCC--cCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcC--CCCCCccch
Confidence            4  5699999998754  557788999999999999999999999999999888889999999998887  667889999


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      +||+++++|+++++.|+.++||++++++||++.|++.+..
T Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  192 (244)
T 1edo_A          153 AAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL  192 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT
T ss_pred             hhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhc
Confidence            9999999999999999999999999999999999987653

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-35  Score=248.27  Aligned_cols=196  Identities=21%  Similarity=0.289  Sum_probs=166.7

Q ss_pred             cccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHH
Q 025260           47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI  124 (255)
Q Consensus        47 ~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~  124 (255)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++.+.. +.++..+.+|++|.  +++.++++
T Consensus         8 ~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~   86 (265)
T 1h5q_A            8 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQI   86 (265)
T ss_dssp             EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhc-CCeeEEEEeeCCCHHHHHHHHHHH
Confidence            3456779999999999999999999999999999999998777766666665543 34678899999973  45666666


Q ss_pred             HHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCC
Q 025260          125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDP  203 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~  203 (255)
                      .+.++  ++|+||||||....  .++.+.+.++|++.+++|+.++++++++++|.|++++ .++||++||..+..  +.+
T Consensus        87 ~~~~~--~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~  160 (265)
T 1h5q_A           87 DADLG--PISGLIANAGVSVV--KPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQI--INQ  160 (265)
T ss_dssp             HHHSC--SEEEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS--CCE
T ss_pred             HHhcC--CCCEEEECCCcCCC--CchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhc--ccc
Confidence            66666  47799999998754  4577889999999999999999999999999998765 49999999988776  332


Q ss_pred             C-------chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          204 L-------YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       204 ~-------~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .       ...|++||+|+++|+++++.|+.++||+|++++||++.|++.+..
T Consensus       161 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  213 (265)
T 1h5q_A          161 SSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM  213 (265)
T ss_dssp             EETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS
T ss_pred             ccccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc
Confidence            2       678999999999999999999999999999999999999997653

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=3.9e-36  Score=248.53  Aligned_cols=190  Identities=26%  Similarity=0.355  Sum_probs=148.2

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEE-eCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++|+++||||++|||++++++|+++|++|+++ +|+++.+++..+++.+.  +.++..+.+|++|.  +++.++++.+.
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA--GINVVVAKGDVKNPEDVENMVKTAMDA   80 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT--TCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            568999999999999999999999999999999 67777787777777654  34678899999973  46667777777


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|++|||||....  .++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||..+..  +.++...
T Consensus        81 ~~~--~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~  154 (247)
T 2hq1_A           81 FGR--IDILVNNAGITRD--TLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGII--GNAGQAN  154 (247)
T ss_dssp             HSC--CCEEEECC-----------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------CHH
T ss_pred             cCC--CCEEEECCCCCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcc--CCCCCcH
Confidence            775  5599999998643  456778888999999999999999999999999888889999999998877  6678899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      |++||+|++.|+++++.|+.+.||++|+++||++.|++.+.
T Consensus       155 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  195 (247)
T 2hq1_A          155 YAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV  195 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh
Confidence            99999999999999999999999999999999999997654

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=2.1e-35  Score=245.16  Aligned_cols=192  Identities=27%  Similarity=0.315  Sum_probs=168.4

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK  125 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~  125 (255)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++.+.+  .++..+.+|++|.  +++.++++.
T Consensus         6 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~   83 (255)
T 1fmc_A            6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG--GQAFACRCDITSEQELSALADFAI   83 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHHH
Confidence            455779999999999999999999999999999999999998888888876643  4577889999973  456667777


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCc
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~  205 (255)
                      +.+++  +|++|||||....  .++ +.+.++|++.+++|+.++++++++++|.|++++.++||++||..+..  +.++.
T Consensus        84 ~~~~~--~d~vi~~Ag~~~~--~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~  156 (255)
T 1fmc_A           84 SKLGK--VDILVNNAGGGGP--KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN--KNINM  156 (255)
T ss_dssp             HHHSS--CCEEEECCCCCCC--CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC--CCTTC
T ss_pred             HhcCC--CCEEEECCCCCCC--CCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC--CCCCC
Confidence            77775  5599999998754  334 77899999999999999999999999999888889999999999887  66788


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ..|++||++++.|+++++.|+.+.||++++++||++.|++.+.
T Consensus       157 ~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~  199 (255)
T 1fmc_A          157 TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS  199 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhh
Confidence            9999999999999999999999999999999999999997654

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=5.3e-36  Score=250.70  Aligned_cols=189  Identities=16%  Similarity=0.144  Sum_probs=159.0

Q ss_pred             cCCcEEEEECCC--CchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           51 KYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        51 ~~gk~vlITGas--~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      ++||+++||||+  +|||+++|++|+++|++|++++|++ +.++..+++.+..+.  ...+.+|++|.  +++.++++.+
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~--~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGS--DIVLQCDVAEDASIDTMFAELGK   83 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTC--CCEEECCTTCHHHHHHHHHHHHT
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCC--cEEEEccCCCHHHHHHHHHHHHH
Confidence            569999999999  9999999999999999999999997 555566666554333  26788999974  3455555555


Q ss_pred             HhcCCCccEEEEecCCCCCc--cccccc-CCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC
Q 025260          127 AIEGLDVGVLINNVGISYPY--ARFFHE-VDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP  203 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~--~~~~~~-~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~  203 (255)
                      .++  ++|+||||||+....  ..++.+ .+.++|++.+++|+.++++++++++|.|++  +|+||++||..+..  +.+
T Consensus        84 ~~g--~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~--~~~  157 (265)
T 1qsg_A           84 VWP--KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAER--AIP  157 (265)
T ss_dssp             TCS--SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTS--BCT
T ss_pred             HcC--CCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhhcc--CCC
Confidence            554  577999999986421  134667 899999999999999999999999999864  58999999998887  667


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      +...|++||+|+++|+++++.|++++||+||+|+||++.|++.+.
T Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  202 (265)
T 1qsg_A          158 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG  202 (265)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGG
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhc
Confidence            889999999999999999999999999999999999999998764

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=4.8e-37  Score=264.84  Aligned_cols=192  Identities=15%  Similarity=0.117  Sum_probs=158.0

Q ss_pred             CCcEEEEECCCC--chHHHHHHHHHHcCCcEEEEeCChh---------hHHHHHHHHHhhc-CCceEEEEEEECCCC---
Q 025260           52 YGSWALVTGPTD--GIGKSFAFQLAKTGLNLVLVGRNPD---------KLKDVSDSIQAKY-AKTQIKSVVVDFSGD---  116 (255)
Q Consensus        52 ~gk~vlITGas~--gIG~~la~~la~~G~~V~l~~r~~~---------~~~~~~~~~~~~~-~~~~~~~~~~d~~~~---  116 (255)
                      ++|+++||||++  |||+++|++|+++|++|++++|++.         +++...+...... .......+.+|+++.   
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            379999999986  9999999999999999998887652         1111111111111 123477888888753   


Q ss_pred             -------------------cHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHh
Q 025260          117 -------------------LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVL  177 (255)
Q Consensus       117 -------------------~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~l  177 (255)
                                         ++++++++.+.++  .+|+||||||+......++.+.+.++|++++++|+.|+++++++++
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g--~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  158 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYG--KINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFV  158 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHC--CEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcC--CCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence                               3567788888887  4669999999854334678899999999999999999999999999


Q ss_pred             hhhhhCCCcEEEEECCccccccCCCCCch-hchHHHHHHHHHHHHHHHHHcc-CCceEEEeeeeeeeeCCcchh
Q 025260          178 PGMLKRKKGAIVNIGSGAAIVIPSDPLYS-VYAATKAYIDQFSRSLYVEYRK-SGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       178 p~~~~~~~g~iv~vsS~~~~~~~~~~~~~-~Y~asK~al~~~~~~l~~e~~~-~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |+|+++  |+||++||..+..  +.+... .|++||+|+.+|+++|+.|+++ +||+||+|+||+|+|+|.+.+
T Consensus       159 p~m~~~--g~Iv~isS~~~~~--~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~  228 (329)
T 3lt0_A          159 NIMKPQ--SSIISLTYHASQK--VVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAI  228 (329)
T ss_dssp             GGEEEE--EEEEEEECGGGTS--CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTC
T ss_pred             HHHhhC--CeEEEEeCccccC--CCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhh
Confidence            999765  9999999999988  778885 9999999999999999999998 899999999999999998875

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=5.9e-36  Score=251.00  Aligned_cols=189  Identities=19%  Similarity=0.242  Sum_probs=158.3

Q ss_pred             cCCcEEEEECC--CCchHHHHHHHHHHcCCcEEEEeCChhh-HHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHH
Q 025260           51 KYGSWALVTGP--TDGIGKSFAFQLAKTGLNLVLVGRNPDK-LKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK  125 (255)
Q Consensus        51 ~~gk~vlITGa--s~gIG~~la~~la~~G~~V~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~  125 (255)
                      ++||+++||||  ++|||+++|++|+++|++|++++|+.++ +++..+++     +.++..+.+|++|.  +++.++++.
T Consensus         5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~   79 (269)
T 2h7i_A            5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-----PAKAPLLELDVQNEEHLASLAGRVT   79 (269)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS-----SSCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc-----CCCceEEEccCCCHHHHHHHHHHHH
Confidence            56999999999  9999999999999999999999998765 34433322     23567789999973  566777777


Q ss_pred             HHhcC-CCccEEEEecCCCCCc---ccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCC
Q 025260          126 EAIEG-LDVGVLINNVGISYPY---ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS  201 (255)
Q Consensus       126 ~~~~~-~~id~lv~nag~~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~  201 (255)
                      +.++. .++|+||||||+..+.   ..++.+.+.++|++.+++|+.++++++++++|.|++  +|+||++||..+ .  +
T Consensus        80 ~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~iss~~~-~--~  154 (269)
T 2h7i_A           80 EAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGMDFDPS-R--A  154 (269)
T ss_dssp             HHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECCCS-S--C
T ss_pred             HHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCeEEEEcCccc-c--c
Confidence            77761 1467999999986421   245788999999999999999999999999999965  389999999776 3  5


Q ss_pred             CCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       202 ~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .+.+..|++||+|+++|+++++.|++++||+||+|+||+++|+|.+.+
T Consensus       155 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~  202 (269)
T 2h7i_A          155 MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAI  202 (269)
T ss_dssp             CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHH
T ss_pred             cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhcc
Confidence            677899999999999999999999999999999999999999986543

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=2e-35  Score=245.60  Aligned_cols=183  Identities=23%  Similarity=0.240  Sum_probs=155.5

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCc-EEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC---cHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD---LDEGVERIK  125 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~-V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~  125 (255)
                      +++||+++||||++|||+++|++|+++|++ |++++|+.+.  +..+++.+..++.++..+.+|++|.   +++.++++.
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHH
Confidence            356999999999999999999999999997 9999998743  3344555544455788899999975   356677777


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC---CcEEEEECCccccccCCC
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK---KGAIVNIGSGAAIVIPSD  202 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~---~g~iv~vsS~~~~~~~~~  202 (255)
                      +.+++  +|+||||||+.          +.++|++.+++|+.++++++++++|.|.+++   .|+||++||.++..  +.
T Consensus        80 ~~~g~--id~lv~~Ag~~----------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~  145 (254)
T 1sby_A           80 DQLKT--VDILINGAGIL----------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN--AI  145 (254)
T ss_dssp             HHHSC--CCEEEECCCCC----------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS--CC
T ss_pred             HhcCC--CCEEEECCccC----------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhcc--CC
Confidence            77775  55999999974          2345899999999999999999999997664   68999999999987  67


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++...|++||+|+++|+++++.|+.++||+|++|+||+++|++.+.
T Consensus       146 ~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~  191 (254)
T 1sby_A          146 HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHT  191 (254)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHS
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccc
Confidence            8889999999999999999999998889999999999999998654

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=6.2e-36  Score=253.60  Aligned_cols=185  Identities=19%  Similarity=0.178  Sum_probs=154.9

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      -.+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++     ..++..+.+|++|.  +.++++.+.
T Consensus        11 ~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~--~~v~~~~~~   83 (291)
T 3rd5_A           11 LPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDL--SSVRRFADG   83 (291)
T ss_dssp             CCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-----SSEEEEEECCTTCH--HHHHHHHHT
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCeeEEEcCCCCH--HHHHHHHHh
Confidence            34578999999999999999999999999999999999998887766554     45788999999975  445555554


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC-------
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP-------  200 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~-------  200 (255)
                      ++  ++|+||||||+..+    ..+.+.++|++++++|+.|+++++++++|.|.+    +||++||.++....       
T Consensus        84 ~~--~iD~lv~nAg~~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~~~~~~~~~  153 (291)
T 3rd5_A           84 VS--GADVLINNAGIMAV----PYALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPGRINLEDLN  153 (291)
T ss_dssp             CC--CEEEEEECCCCCSC----CCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTCCCCSSCTT
T ss_pred             cC--CCCEEEECCcCCCC----cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhccCCCCccccc
Confidence            43  67899999998643    356788889999999999999999999999864    79999999887631       


Q ss_pred             ----CCCCchhchHHHHHHHHHHHHHHHHHccCC--ceEEEeeeeeeeeCCcchh
Q 025260          201 ----SDPLYSVYAATKAYIDQFSRSLYVEYRKSG--IDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       201 ----~~~~~~~Y~asK~al~~~~~~l~~e~~~~g--i~v~~v~Pg~v~T~~~~~~  249 (255)
                          +.++...|++||+|+++|+++++.|+.++|  |+||+|+||+++|++.+..
T Consensus       154 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~  208 (291)
T 3rd5_A          154 WRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGAS  208 (291)
T ss_dssp             CSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC----
T ss_pred             ccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCcccccccc
Confidence                235567899999999999999999999888  9999999999999998875

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-35  Score=247.32  Aligned_cols=184  Identities=23%  Similarity=0.318  Sum_probs=159.3

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~  128 (255)
                      ++||+++||||++|||++++++|+++|++|++++|+.+++++..+++.+...+.++..+.+|++|  ++++.++.+.+.+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999999999999999998888877777654334568889999997  3567777788878


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC---CcEEEEECCccccccCCCCCc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK---KGAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~---~g~iv~vsS~~~~~~~~~~~~  205 (255)
                      ++  +|+||||||+..          .++|++.+++|+.+++.+++.++|.|++++   .|+||++||..+..  +.++.
T Consensus        85 g~--id~lv~~Ag~~~----------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~  150 (267)
T 2gdz_A           85 GR--LDILVNNAGVNN----------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM--PVAQQ  150 (267)
T ss_dssp             SC--CCEEEECCCCCC----------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS--CCTTC
T ss_pred             CC--CCEEEECCCCCC----------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccC--CCCCC
Confidence            75  559999999752          245789999999999999999999997653   68999999999987  67888


Q ss_pred             hhchHHHHHHHHHHHHH--HHHHccCCceEEEeeeeeeeeCCcch
Q 025260          206 SVYAATKAYIDQFSRSL--YVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l--~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ..|++||+|+++|++++  +.|+.+.||+||+|+||++.|++.+.
T Consensus       151 ~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~  195 (267)
T 2gdz_A          151 PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILES  195 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHG
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhc
Confidence            99999999999999995  68999999999999999999998654

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=9.3e-35  Score=247.28  Aligned_cols=192  Identities=20%  Similarity=0.244  Sum_probs=165.9

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+ +.++..+.+|++|.  +++.++++.+
T Consensus        22 ~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (302)
T 1w6u_A           22 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSELIK  100 (302)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            34779999999999999999999999999999999999999888888887653 34688899999973  4666677777


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhh-hCCCcEEEEECCccccccCCCCCc
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGML-KRKKGAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~-~~~~g~iv~vsS~~~~~~~~~~~~  205 (255)
                      .+++  +|+||||||+...  .++.+.+.++|++.+++|+.+++.+++.++|.|+ +++.++||++||..+..  +.++.
T Consensus       101 ~~g~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~  174 (302)
T 1w6u_A          101 VAGH--PNIVINNAAGNFI--SPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET--GSGFV  174 (302)
T ss_dssp             HTCS--CSEEEECCCCCCC--SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH--CCTTC
T ss_pred             HcCC--CCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEccccccc--CCCCc
Confidence            7764  5699999998643  5577889999999999999999999999999997 44568999999998887  66788


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC-Ccc
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY-NLN  247 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~-~~~  247 (255)
                      ..|++||+|++.|+++++.|+.++||+|++++||++.|+ +.+
T Consensus       175 ~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~  217 (302)
T 1w6u_A          175 VPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFS  217 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-----
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhh
Confidence            999999999999999999999999999999999999998 543

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=2.9e-35  Score=242.91  Aligned_cols=188  Identities=25%  Similarity=0.381  Sum_probs=164.7

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEE-eCChhhHHHHHHHHHhhcCCceEEE-EEEECCCC--cHHHHHHHHHHh
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYAKTQIKS-VVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~-~r~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      +|+++||||++|||++++++|+++|++|+++ +|+.+++++..+++.+.+  .++.. +.+|++|.  +++.++++.+.+
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRG--SPLVAVLGANLLEAEAATALVHQAAEVL   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTT--CSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence            5789999999999999999999999999998 899988888877776643  23445 88999973  466677777777


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++  +|++|||||+...  .++.+.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+..  +.++...|
T Consensus        79 ~~--~d~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~Y  152 (245)
T 2ph3_A           79 GG--LDTLVNNAGITRD--TLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGIL--GNPGQANY  152 (245)
T ss_dssp             TC--CCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH--CCSSBHHH
T ss_pred             CC--CCEEEECCCCCCC--CCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhcc--CCCCCcch
Confidence            75  5599999998753  557788999999999999999999999999999887789999999998887  66788999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++||+|+++++++++.|+.+.||++++++||++.|++.+.
T Consensus       153 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  192 (245)
T 2ph3_A          153 VASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER  192 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh
Confidence            9999999999999999999999999999999999998654

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=8.9e-35  Score=245.87  Aligned_cols=190  Identities=24%  Similarity=0.309  Sum_probs=164.8

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      .++||+++||||++|||++++++|+++|++|++++|+++++++..+++.+.+ ...+..+.+|++|  ++++.++++.+.
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~~  103 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGKL  103 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            3679999999999999999999999999999999999999988888877654 3468889999998  356667777777


Q ss_pred             hcCCCccEEEEe-cCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          128 IEGLDVGVLINN-VGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       128 ~~~~~id~lv~n-ag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      +++  +|++||| ||...   ..+.+.+.+++++.+++|+.|++.++++++|.|.++ .|+||++||.++..  +.++..
T Consensus       104 ~g~--iD~li~naag~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~--~~~~~~  175 (286)
T 1xu9_A          104 MGG--LDMLILNHITNTS---LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKV--AYPMVA  175 (286)
T ss_dssp             HTS--CSEEEECCCCCCC---CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTS--CCTTCH
T ss_pred             cCC--CCEEEECCccCCC---CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCccccc--CCCCcc
Confidence            775  5599999 56643   234567899999999999999999999999988654 58999999999987  678889


Q ss_pred             hchHHHHHHHHHHHHHHHHH--ccCCceEEEeeeeeeeeCCcch
Q 025260          207 VYAATKAYIDQFSRSLYVEY--RKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~--~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      .|++||+|+++|+++++.|+  ...||+|++++||+++|++.+.
T Consensus       176 ~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~  219 (286)
T 1xu9_A          176 AYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMK  219 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHH
Confidence            99999999999999999999  6789999999999999998653

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=2.6e-36  Score=249.70  Aligned_cols=187  Identities=20%  Similarity=0.277  Sum_probs=130.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcH-HHHHHHHHHh
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLD-EGVERIKEAI  128 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~  128 (255)
                      +++||+++||||++|||+++|++|++ |++|++++|+++++++..+       ...+..+.+|+++... +...+..+.+
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~~   73 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-------IEGVEPIESDIVKEVLEEGGVDKLKNL   73 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-------STTEEEEECCHHHHHHTSSSCGGGTTC
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-------hcCCcceecccchHHHHHHHHHHHHhc
Confidence            35699999999999999999999998 9999999999887765543       1246778888875311 1111122223


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      +  ++|++|||||+...  .++.+.+.++|++.+++|+.+++++++.++|.|++++ |+||++||..+..  +.++...|
T Consensus        74 ~--~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~--~~~~~~~Y  146 (245)
T 3e9n_A           74 D--HVDTLVHAAAVARD--TTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNG--PHPGNTIY  146 (245)
T ss_dssp             S--CCSEEEECC------------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC------------CHHH
T ss_pred             C--CCCEEEECCCcCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCccccc--CCCCchHH
Confidence            3  57799999998754  5678889999999999999999999999999997654 9999999999988  77889999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhhh
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLVM  251 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~  251 (255)
                      ++||+|+++|+++|+.|++++||+||+|+||++.|++.+....
T Consensus       147 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~  189 (245)
T 3e9n_A          147 AASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMD  189 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhh
Confidence            9999999999999999999999999999999999999877543

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=5.8e-36  Score=261.92  Aligned_cols=197  Identities=15%  Similarity=0.076  Sum_probs=159.9

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHH-cCCcEEEEeCChhhHHH------------HHHHHHhhcCCceEEEEEEECC
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAK-TGLNLVLVGRNPDKLKD------------VSDSIQAKYAKTQIKSVVVDFS  114 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~-~G~~V~l~~r~~~~~~~------------~~~~~~~~~~~~~~~~~~~d~~  114 (255)
                      .+...+|++||||||+|||+++|++|++ .|++|++++|+.+..++            ..+++.+.  +.....+.+|++
T Consensus        56 ~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~--G~~a~~i~~Dvt  133 (422)
T 3s8m_A           56 VRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA--GLYSKSINGDAF  133 (422)
T ss_dssp             CCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTT
T ss_pred             ccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc--CCcEEEEEecCC
Confidence            3445689999999999999999999999 99999999998754332            23445444  346788999999


Q ss_pred             CC--cHHHHHHHHHHh-cCCCccEEEEecCCCC-----------Cccccc---------------------ccCCHHHHH
Q 025260          115 GD--LDEGVERIKEAI-EGLDVGVLINNVGISY-----------PYARFF---------------------HEVDQVLLK  159 (255)
Q Consensus       115 ~~--~~~~~~~~~~~~-~~~~id~lv~nag~~~-----------~~~~~~---------------------~~~~~~~~~  159 (255)
                      |.  +++.++.+.+.+ +  .+|+||||||...           ....++                     .+.+.++|+
T Consensus       134 d~~~v~~~v~~i~~~~~G--~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~  211 (422)
T 3s8m_A          134 SDAARAQVIELIKTEMGG--QVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIE  211 (422)
T ss_dssp             SHHHHHHHHHHHHHHSCS--CEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCC--CCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHH
Confidence            83  567778888888 6  4679999999720           011223                     367999999


Q ss_pred             hHhHHhhhHHH-HHHHHHhhhhhhCCCcEEEEECCccccccCCCCCc--hhchHHHHHHHHHHHHHHHHHccCCceEEEe
Q 025260          160 NLIKVNVEGTT-KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY--SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQ  236 (255)
Q Consensus       160 ~~~~~N~~~~~-~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~--~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v  236 (255)
                      +++++|..+.+ .+++++.+.+..+++|+||++||..+..  +.|.+  +.|++||+|+.+|+++|+.|++++||+||+|
T Consensus       212 ~~v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~--~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaV  289 (422)
T 3s8m_A          212 DTITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEI--TWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVA  289 (422)
T ss_dssp             HHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGG--GHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred             HHHHhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhc--cCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEE
Confidence            99999999987 7888877644334569999999999887  55666  8999999999999999999999999999999


Q ss_pred             eeeeeeeCCcchhh
Q 025260          237 VLFLLCFYNLNDLV  250 (255)
Q Consensus       237 ~Pg~v~T~~~~~~~  250 (255)
                      +||+|.|++.+.+.
T Consensus       290 aPG~i~T~~~~~ip  303 (422)
T 3s8m_A          290 VLKSVVTQASAAIP  303 (422)
T ss_dssp             EECCCCCTTGGGST
T ss_pred             EcCCCcChhhhcCC
Confidence            99999999987653

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=8.1e-36  Score=246.24  Aligned_cols=181  Identities=13%  Similarity=0.022  Sum_probs=155.6

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~  128 (255)
                      .++|+++||||++|||+++|++|+++|++|++++|++++.+            .....+.+|++|  ++++.++++.+.+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~v~~~~~~~~~~~   72 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------------SASVIVKMTDSFTEQADQVTAEVGKLL   72 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------------SEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------------CCcEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            35899999999999999999999999999999999976532            134667889986  3466667777777


Q ss_pred             cCCCccEEEEecCCCCCccccc-ccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          129 EGLDVGVLINNVGISYPYARFF-HEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~-~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +..++|+||||||+...  .++ .+.+.++|++.+++|+.+++.++++++|.|++  +|+||++||..+..  +.++...
T Consensus        73 ~~g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~--~~~~~~~  146 (241)
T 1dhr_A           73 GDQKVDAILCVAGGWAG--GNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALD--GTPGMIG  146 (241)
T ss_dssp             TTCCEEEEEECCCCCCC--BCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGS--CCTTBHH
T ss_pred             CCCCCCEEEEcccccCC--CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHHHcc--CCCCchH
Confidence            32257799999998753  445 67888999999999999999999999999864  48999999999988  6788999


Q ss_pred             chHHHHHHHHHHHHHHHHHc--cCCceEEEeeeeeeeeCCcchh
Q 025260          208 YAATKAYIDQFSRSLYVEYR--KSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~--~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |++||+|+++|+++++.|++  ++||+||+|+||+++|+|.+..
T Consensus       147 Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~  190 (241)
T 1dhr_A          147 YGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKS  190 (241)
T ss_dssp             HHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcccccc
Confidence            99999999999999999998  8999999999999999987653

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=9e-35  Score=240.01  Aligned_cols=186  Identities=28%  Similarity=0.352  Sum_probs=158.2

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      ++++||+++||||++|||++++++|+++|++|++++|+++++++..+++    .+  ...+.+|++|.  +.++++.+.+
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~--~~~~~~D~~~~--~~~~~~~~~~   74 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC----PG--IEPVCVDLGDW--EATERALGSV   74 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TT--CEEEECCTTCH--HHHHHHHTTC
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CC--CCEEEEeCCCH--HHHHHHHHHc
Confidence            3467999999999999999999999999999999999988777655443    12  34568999875  3344444433


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCchh
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +  ++|++|||||....  .++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..  +.++...
T Consensus        75 ~--~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~  148 (244)
T 3d3w_A           75 G--PVDLLVNNAAVALL--QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR--AVTNHSV  148 (244)
T ss_dssp             C--CCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS--CCTTBHH
T ss_pred             C--CCCEEEECCccCCC--cchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhcc--CCCCCch
Confidence            3  46799999998653  5577889999999999999999999999999998776 79999999999887  6678899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      |++||+|++.|+++++.|+.++||+|++++||++.|++.+.
T Consensus       149 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~  189 (244)
T 3d3w_A          149 YCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQA  189 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhh
Confidence            99999999999999999999999999999999999998653

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=9.9e-35  Score=244.54  Aligned_cols=192  Identities=17%  Similarity=0.183  Sum_probs=163.8

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.+.  +.++..+.+|++|.  +++.++++.+.
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~  108 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY--GVHSKAYKCNISDPKSVEETISQQEKD  108 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH--CSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeecCCHHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999999988877777666554  34678899999973  46667777777


Q ss_pred             hcCCCccEEEEecCCCCCcccccc-cCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          128 IEGLDVGVLINNVGISYPYARFFH-EVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      +++  +|+||||||.... ..++. +.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+......+...
T Consensus       109 ~g~--id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~  185 (279)
T 3ctm_A          109 FGT--IDVFVANAGVTWT-QGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQA  185 (279)
T ss_dssp             HSC--CSEEEECGGGSTT-C--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHH
T ss_pred             hCC--CCEEEECCccccc-CCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcc
Confidence            774  5599999998643 13455 7788999999999999999999999999988888999999999987721157788


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      .|++||+|++.|+++++.|+.++| +||+++||++.|++.+
T Consensus       186 ~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~  225 (279)
T 3ctm_A          186 PYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITD  225 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTS
T ss_pred             cHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccc
Confidence            999999999999999999999999 9999999999999875

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=1.9e-35  Score=241.25  Aligned_cols=168  Identities=21%  Similarity=0.124  Sum_probs=147.5

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+                      +|++|.  +.++++.+.++
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------------~D~~~~--~~v~~~~~~~g   58 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------------------LDISDE--KSVYHYFETIG   58 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------------CCTTCH--HHHHHHHHHHC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------------cCCCCH--HHHHHHHHHhC
Confidence            356999999999999999999999999999999999865                      788875  55566666665


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhch
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA  209 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~  209 (255)
                        ++|+||||||+... ..++.+.+.++|++.+++|+.++++++++++|.|++  +|+||++||..+..  +.++...|+
T Consensus        59 --~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~~sS~~~~~--~~~~~~~Y~  131 (223)
T 3uce_A           59 --AFDHLIVTAGSYAP-AGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ--GGSITLTSGMLSRK--VVANTYVKA  131 (223)
T ss_dssp             --SEEEEEECCCCCCC-CSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE--EEEEEEECCGGGTS--CCTTCHHHH
T ss_pred             --CCCEEEECCCCCCC-CCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC--CeEEEEecchhhcc--CCCCchHHH
Confidence              57799999998743 256889999999999999999999999999999965  48999999999988  778899999


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      +||+|+++|+++|+.|+.+  |+||+|+||+++||+.+...
T Consensus       132 asK~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~  170 (223)
T 3uce_A          132 AINAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMN  170 (223)
T ss_dssp             HHHHHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSC
T ss_pred             HHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcc
Confidence            9999999999999999986  99999999999999987543

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-34  Score=245.25  Aligned_cols=189  Identities=24%  Similarity=0.356  Sum_probs=165.6

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhc---CCceEEEEEEECCCC--cHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKY---AKTQIKSVVVDFSGD--LDEGVERI  124 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~~~--~~~~~~~~  124 (255)
                      .++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+..   .+.++..+.+|++|.  +++.++++
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   94 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   94 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence            4779999999999999999999999999999999999999888888886531   145688999999973  46677777


Q ss_pred             HHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                      .+.+++  +|+||||||....  .++.+.+.++|++.+++|+.++++++++++|.+.+++.|+||++||.. ..  +.+.
T Consensus        95 ~~~~g~--id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~--~~~~  167 (303)
T 1yxm_A           95 LDTFGK--INFLVNNGGGQFL--SPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KA--GFPL  167 (303)
T ss_dssp             HHHHSC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TT--CCTT
T ss_pred             HHHcCC--CCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-cc--CCCc
Confidence            777775  5599999997643  457788999999999999999999999999977666679999999988 55  6678


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                      ...|++||+|+.+|+++++.|+.++||+|++|+||++.|++
T Consensus       168 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~  208 (303)
T 1yxm_A          168 AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQT  208 (303)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTG
T ss_pred             chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccch
Confidence            89999999999999999999999999999999999999995

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-34  Score=241.45  Aligned_cols=198  Identities=20%  Similarity=0.204  Sum_probs=163.4

Q ss_pred             cccccCCcEEEEECCCCchHHHHHHHHHHcC---CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHH
Q 025260           47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTG---LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGV  121 (255)
Q Consensus        47 ~~~~~~gk~vlITGas~gIG~~la~~la~~G---~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~  121 (255)
                      ....+++|+++||||++|||+++|++|+++|   ++|++++|+.++.++. +++.+.  ..++.++.+|++|  ++++.+
T Consensus        15 ~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~--~~~~~~~~~Dl~~~~~v~~~~   91 (267)
T 1sny_A           15 VPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKN--HSNIHILEIDLRNFDAYDKLV   91 (267)
T ss_dssp             -----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHH--CTTEEEEECCTTCGGGHHHHH
T ss_pred             cccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhcc--CCceEEEEecCCChHHHHHHH
Confidence            3445779999999999999999999999999   9999999998776543 444443  3467889999997  457777


Q ss_pred             HHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC------C-----CcEEEE
Q 025260          122 ERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR------K-----KGAIVN  190 (255)
Q Consensus       122 ~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~------~-----~g~iv~  190 (255)
                      +++.+.++..++|+||||||+... ..++.+.+.+++++.+++|+.++++++++++|.|+++      +     .++||+
T Consensus        92 ~~~~~~~g~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~  170 (267)
T 1sny_A           92 ADIEGVTKDQGLNVLFNNAGIAPK-SARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIIN  170 (267)
T ss_dssp             HHHHHHHGGGCCSEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEE
T ss_pred             HHHHHhcCCCCccEEEECCCcCCC-ccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEE
Confidence            888888873346699999998752 2457788999999999999999999999999999876      3     689999


Q ss_pred             ECCccccccC-CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          191 IGSGAAIVIP-SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       191 vsS~~~~~~~-~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      +||..+.... +.++...|++||+|+++|+++++.|+.++||+|++|+||+++|+|.+.
T Consensus       171 isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  229 (267)
T 1sny_A          171 MSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS  229 (267)
T ss_dssp             ECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT
T ss_pred             EecccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC
Confidence            9999887621 113677899999999999999999999999999999999999999754

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=9.1e-35  Score=240.21  Aligned_cols=191  Identities=21%  Similarity=0.289  Sum_probs=156.3

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcC--CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G--~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      ++|+++||||++|||++++++|+++|  ++|++++|+.+++++..+    . ...++..+.+|++|.  +++.++++.+.
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~----~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----I-KDSRVHVLPLTVTCDKSLDTFVSKVGEI   76 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----C-CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh----c-cCCceEEEEeecCCHHHHHHHHHHHHHh
Confidence            47999999999999999999999999  999999999887765432    1 245688899999973  56677777777


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC------C-----CcEEEEECCccc
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR------K-----KGAIVNIGSGAA  196 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~------~-----~g~iv~vsS~~~  196 (255)
                      ++..++|+||||||...+ ..++.+.+.+++++.+++|+.+++.++++++|.|.++      +     .++||++||..+
T Consensus        77 ~g~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~  155 (250)
T 1yo6_A           77 VGSDGLSLLINNAGVLLS-YGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG  155 (250)
T ss_dssp             HGGGCCCEEEECCCCCCC-BCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred             cCCCCCcEEEECCcccCC-CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcc
Confidence            773246699999998752 3567788999999999999999999999999999876      5     799999999988


Q ss_pred             cccCCC-----CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          197 IVIPSD-----PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       197 ~~~~~~-----~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ....+.     ++...|++||+|+++|+++++.|+.++||+|++++||+++|++.+.
T Consensus       156 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  212 (250)
T 1yo6_A          156 SITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK  212 (250)
T ss_dssp             CSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------
T ss_pred             ccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC
Confidence            772111     5678999999999999999999999999999999999999999764

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=3.3e-35  Score=249.76  Aligned_cols=194  Identities=18%  Similarity=0.137  Sum_probs=152.5

Q ss_pred             cccCCcEEEEECCC--CchHHHHHHHHHHcCCcEEEEeCChhhHH--H-----HHHHHHhhc-CC--ceEEEEEEEC---
Q 025260           49 LRKYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLK--D-----VSDSIQAKY-AK--TQIKSVVVDF---  113 (255)
Q Consensus        49 ~~~~gk~vlITGas--~gIG~~la~~la~~G~~V~l~~r~~~~~~--~-----~~~~~~~~~-~~--~~~~~~~~d~---  113 (255)
                      ++++||+++||||+  +|||+++|++|+++|++|++++|++....  +     ..+++.+.. +.  .....+.+|.   
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceecc
Confidence            45679999999999  99999999999999999999998642110  0     000111100 00  1123444542   


Q ss_pred             -------------------CCCcHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHH
Q 025260          114 -------------------SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ  174 (255)
Q Consensus       114 -------------------~~~~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  174 (255)
                                         .+++++.++++.+.++  ++|+||||||+......++.+.+.++|++++++|+.|++++++
T Consensus        84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g--~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  161 (297)
T 1d7o_A           84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFG--SIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHS--CEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             chhhhhhhhhccccccccCHHHHHHHHHHHHHHcC--CCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHH
Confidence                               2256777888888887  4669999999754223567889999999999999999999999


Q ss_pred             HHhhhhhhCCCcEEEEECCccccccCCCCCc-hhchHHHHHHHHHHHHHHHHHcc-CCceEEEeeeeeeeeCCcch
Q 025260          175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY-SVYAATKAYIDQFSRSLYVEYRK-SGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       175 ~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~-~~Y~asK~al~~~~~~l~~e~~~-~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      +++|+|++  +|+||++||..+..  +.++. ..|++||+|+++|+++|+.|+++ +||+||+|+||+++|||.+.
T Consensus       162 ~~~~~m~~--~g~iv~isS~~~~~--~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~  233 (297)
T 1d7o_A          162 HFLPIMNP--GGASISLTYIASER--IIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKA  233 (297)
T ss_dssp             HHGGGEEE--EEEEEEEECGGGTS--CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSC
T ss_pred             HHHHHhcc--CceEEEEecccccc--CCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhh
Confidence            99999965  48999999999887  66776 69999999999999999999985 89999999999999999765

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=4.3e-35  Score=254.29  Aligned_cols=195  Identities=16%  Similarity=0.091  Sum_probs=159.4

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHH-cCCcEEEEeCChhhHH------------HHHHHHHhhcCCceEEEEEEECCC
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAK-TGLNLVLVGRNPDKLK------------DVSDSIQAKYAKTQIKSVVVDFSG  115 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~-~G~~V~l~~r~~~~~~------------~~~~~~~~~~~~~~~~~~~~d~~~  115 (255)
                      +...||++|||||++|||+++|+.|++ .|++|++++|+.+..+            ...+++.+.  +.....+.+|++|
T Consensus        43 ~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~--G~~a~~i~~Dvtd  120 (405)
T 3zu3_A           43 IANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK--GLYAKSINGDAFS  120 (405)
T ss_dssp             CTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTS
T ss_pred             cCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc--CCceEEEECCCCC
Confidence            345689999999999999999999999 9999999998765432            223344443  3467889999998


Q ss_pred             --CcHHHHHHHHHHhcCCCccEEEEecCCCCC-----------ccccc---------------------ccCCHHHHHhH
Q 025260          116 --DLDEGVERIKEAIEGLDVGVLINNVGISYP-----------YARFF---------------------HEVDQVLLKNL  161 (255)
Q Consensus       116 --~~~~~~~~~~~~~~~~~id~lv~nag~~~~-----------~~~~~---------------------~~~~~~~~~~~  161 (255)
                        ++++.++++.+.+++  +|+||||||....           ..+++                     .+.+.++|+++
T Consensus       121 ~~~v~~~v~~i~~~~G~--IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~  198 (405)
T 3zu3_A          121 DEIKQLTIDAIKQDLGQ--VDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDST  198 (405)
T ss_dssp             HHHHHHHHHHHHHHTSC--EEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCC--CCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHH
Confidence              357778888888874  6699999997410           11333                     67899999999


Q ss_pred             hHHhhhHHH-HHHHHHhh-hhhhCCCcEEEEECCccccccCCCCCc--hhchHHHHHHHHHHHHHHHHHccC-CceEEEe
Q 025260          162 IKVNVEGTT-KVTQAVLP-GMLKRKKGAIVNIGSGAAIVIPSDPLY--SVYAATKAYIDQFSRSLYVEYRKS-GIDVQCQ  236 (255)
Q Consensus       162 ~~~N~~~~~-~l~~~~lp-~~~~~~~g~iv~vsS~~~~~~~~~~~~--~~Y~asK~al~~~~~~l~~e~~~~-gi~v~~v  236 (255)
                      +++|..+.+ .+++++.+ .|++ ++|+||++||..+..  +.|.+  +.|++||+|+.+|+++|+.|++++ ||+||+|
T Consensus       199 v~Vn~~~~~~~~~~~~~~~~m~~-~gG~IVniSSi~~~~--~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaV  275 (405)
T 3zu3_A          199 VAVMGGEDWQMWIDALLDAGVLA-EGAQTTAFTYLGEKI--THDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVS  275 (405)
T ss_dssp             HHHHSSHHHHHHHHHHHHHTCEE-EEEEEEEEECCCCGG--GTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEE
T ss_pred             HHhhchhHHHHHHHHHHHHhhhh-CCcEEEEEeCchhhC--cCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEE
Confidence            999999998 77887765 4544 469999999999988  66767  999999999999999999999999 9999999


Q ss_pred             eeeeeeeCCcchhh
Q 025260          237 VLFLLCFYNLNDLV  250 (255)
Q Consensus       237 ~Pg~v~T~~~~~~~  250 (255)
                      +||.+.|++...+.
T Consensus       276 aPG~i~T~~s~~ip  289 (405)
T 3zu3_A          276 VLKAVVSQASSAIP  289 (405)
T ss_dssp             ECCCCCCHHHHTST
T ss_pred             EeCCCcCchhhcCC
Confidence            99999999887653

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-35  Score=243.35  Aligned_cols=180  Identities=14%  Similarity=0.048  Sum_probs=154.8

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhc
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIE  129 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~  129 (255)
                      ++|+++||||++|||+++|++|+++|++|++++|++++.+            .....+.+|++|.  +++.++++.+.++
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~   69 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------------DSNILVDGNKNWTEQEQSILEQTASSLQ   69 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------------SEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------------cccEEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            4899999999999999999999999999999999976532            1345678888863  4566677777773


Q ss_pred             CCCccEEEEecCCCCCccccc-ccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          130 GLDVGVLINNVGISYPYARFF-HEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~-~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ..++|+||||||+...  .++ .+.+.++|++.+++|+.+++.++++++|.|++  .|+||++||..+..  +.++...|
T Consensus        70 ~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~--~~~~~~~Y  143 (236)
T 1ooe_A           70 GSQVDGVFCVAGGWAG--GSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMG--PTPSMIGY  143 (236)
T ss_dssp             TCCEEEEEECCCCCCC--BCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGS--CCTTBHHH
T ss_pred             CCCCCEEEECCcccCC--CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECchhhcc--CCCCcHHH
Confidence            2367899999998753  445 67888999999999999999999999999864  48999999999988  67889999


Q ss_pred             hHHHHHHHHHHHHHHHHHc--cCCceEEEeeeeeeeeCCcchh
Q 025260          209 AATKAYIDQFSRSLYVEYR--KSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~--~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ++||+|+++|+++++.|+.  ++||+||+|+||+++|++.+..
T Consensus       144 ~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~  186 (236)
T 1ooe_A          144 GMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKW  186 (236)
T ss_dssp             HHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhc
Confidence            9999999999999999998  8999999999999999987653

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=3.8e-35  Score=271.70  Aligned_cols=193  Identities=24%  Similarity=0.283  Sum_probs=150.2

Q ss_pred             CCcccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeC---------ChhhHHHHHHHHHhhcCCceEEEEEEECCC
Q 025260           45 PAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR---------NPDKLKDVSDSIQAKYAKTQIKSVVVDFSG  115 (255)
Q Consensus        45 ~~~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  115 (255)
                      +...++++||+++||||++|||+++|++|+++|++|++++|         +.+.+++..+++.+.+..  .   .+|+++
T Consensus        11 ~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~--~---~~D~~d   85 (613)
T 3oml_A           11 SDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE--A---VADYNS   85 (613)
T ss_dssp             ----CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC--E---EECCCC
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe--E---EEEeCC
Confidence            34455688999999999999999999999999999999988         777788888888776432  2   367776


Q ss_pred             --CcHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECC
Q 025260          116 --DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGS  193 (255)
Q Consensus       116 --~~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS  193 (255)
                        ++++.++++.+.+++  +|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||
T Consensus        86 ~~~~~~~~~~~~~~~g~--iDiLVnnAGi~~~--~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS  161 (613)
T 3oml_A           86 VIDGAKVIETAIKAFGR--VDILVNNAGILRD--RSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSS  161 (613)
T ss_dssp             GGGHHHHHC------------CEECCCCCCCC--CCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred             HHHHHHHHHHHHHHCCC--CcEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence              345666777777775  5599999999754  5688999999999999999999999999999999988999999999


Q ss_pred             ccccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          194 GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       194 ~~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      .++..  +.++...|++||+|+.+|+++|+.|++++||+||+|+||.+ |+|.+..
T Consensus       162 ~a~~~--~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~  214 (613)
T 3oml_A          162 NSGIY--GNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGI  214 (613)
T ss_dssp             HHHHH--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCC
T ss_pred             HHHcC--CCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhc
Confidence            99988  77889999999999999999999999999999999999975 6666543

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=2.6e-35  Score=252.89  Aligned_cols=195  Identities=16%  Similarity=0.188  Sum_probs=130.5

Q ss_pred             cccCCcEEEEECC--CCchHHHHHHHHHHcCCcEEEEeCCh-----------hhHH-----------HHHHHHHhhcCC-
Q 025260           49 LRKYGSWALVTGP--TDGIGKSFAFQLAKTGLNLVLVGRNP-----------DKLK-----------DVSDSIQAKYAK-  103 (255)
Q Consensus        49 ~~~~gk~vlITGa--s~gIG~~la~~la~~G~~V~l~~r~~-----------~~~~-----------~~~~~~~~~~~~-  103 (255)
                      ++++||+++||||  ++|||+++|++|+++|++|++++|++           ++++           +..+++.+.+.. 
T Consensus         5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (319)
T 2ptg_A            5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDL   84 (319)
T ss_dssp             CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccc
Confidence            4567999999999  89999999999999999999998753           1222           222333322111 


Q ss_pred             --ceEEEEEEE----------CC----------CCcHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhH
Q 025260          104 --TQIKSVVVD----------FS----------GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNL  161 (255)
Q Consensus       104 --~~~~~~~~d----------~~----------~~~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~  161 (255)
                        ......++|          ++          +++++.++++.+.++  ++|+||||||+......++.+.+.++|+++
T Consensus        85 ~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g--~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~  162 (319)
T 2ptg_A           85 VFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVG--QIDILVHSLANGPEVTKPLLQTSRKGYLAA  162 (319)
T ss_dssp             CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHS--CEEEEEEEEECCSSSSSCGGGCCHHHHHHH
T ss_pred             cccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcC--CCCEEEECCccCCCCCCccccCCHHHHHHH
Confidence              122332222          22          256778888888887  466999999975322356788999999999


Q ss_pred             hHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCc-hhchHHHHHHHHHHHHHHHHHcc-CCceEEEeeee
Q 025260          162 IKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY-SVYAATKAYIDQFSRSLYVEYRK-SGIDVQCQVLF  239 (255)
Q Consensus       162 ~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~-~~Y~asK~al~~~~~~l~~e~~~-~gi~v~~v~Pg  239 (255)
                      +++|+.|+++++++++|+|++  +|+||++||..+..  +.++. ..|++||+|+.+|+++|+.|+++ +||+||+|+||
T Consensus       163 ~~vN~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~--~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG  238 (319)
T 2ptg_A          163 VSSSSYSFVSLLQHFLPLMKE--GGSALALSYIASEK--VIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAG  238 (319)
T ss_dssp             HHHHTHHHHHHHHHHGGGEEE--EEEEEEEEECC--------------------THHHHHHHHHHHHHHHCCEEEEEEEC
T ss_pred             HhHhhHHHHHHHHHHHHHHhc--CceEEEEecccccc--ccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeC
Confidence            999999999999999999965  38999999999887  66776 68999999999999999999985 89999999999


Q ss_pred             eeeeCCcchh
Q 025260          240 LLCFYNLNDL  249 (255)
Q Consensus       240 ~v~T~~~~~~  249 (255)
                      +++|+|.+..
T Consensus       239 ~v~T~~~~~~  248 (319)
T 2ptg_A          239 PLKSRAASAI  248 (319)
T ss_dssp             CCC-------
T ss_pred             CccChhhhhc
Confidence            9999997654

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=2e-34  Score=239.55  Aligned_cols=192  Identities=22%  Similarity=0.304  Sum_probs=165.1

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCC-hhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      ++||+++||||++|||++++++|+++|++|++++|+ ++++++..+++.+.  +.++..+.+|++|.  +++.++++.+.
T Consensus         5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (258)
T 3afn_B            5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD--GGDAAFFAADLATSEACQQLVDEFVAK   82 (258)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            569999999999999999999999999999999999 88888888777654  34688899999973  46677777777


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC--C---cEEEEECCccccccCCC
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK--K---GAIVNIGSGAAIVIPSD  202 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~--~---g~iv~vsS~~~~~~~~~  202 (255)
                      +++  +|+||||||.... ..++.+.+.++|++.+++|+.+++.++++++|.|++++  .   ++||++||..+... +.
T Consensus        83 ~g~--id~vi~~Ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~  158 (258)
T 3afn_B           83 FGG--IDVLINNAGGLVG-RKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG-GG  158 (258)
T ss_dssp             HSS--CSEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC-CC
T ss_pred             cCC--CCEEEECCCCcCC-cCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC-CC
Confidence            775  5599999997322 24577889999999999999999999999999997654  3   89999999887641 34


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++...|++||++++.++++++.|+.++||+|++++||++.|++.+.
T Consensus       159 ~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~  204 (258)
T 3afn_B          159 PGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHAD  204 (258)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTT
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccc
Confidence            6788999999999999999999999999999999999999998764

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=5.7e-35  Score=250.39  Aligned_cols=194  Identities=19%  Similarity=0.146  Sum_probs=151.8

Q ss_pred             cccCCcEEEEECC--CCchHHHHHHHHHHcCCcEEEEeCChhh------HH-HHHHHHHhhc-CC----ceEEEEEE---
Q 025260           49 LRKYGSWALVTGP--TDGIGKSFAFQLAKTGLNLVLVGRNPDK------LK-DVSDSIQAKY-AK----TQIKSVVV---  111 (255)
Q Consensus        49 ~~~~gk~vlITGa--s~gIG~~la~~la~~G~~V~l~~r~~~~------~~-~~~~~~~~~~-~~----~~~~~~~~---  111 (255)
                      ++++||+++||||  ++|||+++|++|+++|++|++++|++..      .. +..+++.+.. +.    ......++   
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~   84 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFD   84 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCS
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccccccc
Confidence            4567999999999  8999999999999999999999987421      00 0111121111 11    12333222   


Q ss_pred             -------ECC----------CCcHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHH
Q 025260          112 -------DFS----------GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ  174 (255)
Q Consensus       112 -------d~~----------~~~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  174 (255)
                             |++          +++++.++++.+.+++  +|+||||||+......++.+.+.++|++++++|+.|++++++
T Consensus        85 ~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~--iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  162 (315)
T 2o2s_A           85 KPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGN--IDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQ  162 (315)
T ss_dssp             STTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCS--EEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCC--CCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence                   222          2567788888888874  669999999764223567889999999999999999999999


Q ss_pred             HHhhhhhhCCCcEEEEECCccccccCCCCCc-hhchHHHHHHHHHHHHHHHHHcc-CCceEEEeeeeeeeeCCcch
Q 025260          175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY-SVYAATKAYIDQFSRSLYVEYRK-SGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       175 ~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~-~~Y~asK~al~~~~~~l~~e~~~-~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      +++|+|++  +|+||++||.++..  +.++. ..|++||+|+.+|+++|+.|+.+ +||+||+|+||+|+|+|.+.
T Consensus       163 ~~~~~m~~--~g~Iv~isS~~~~~--~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~  234 (315)
T 2o2s_A          163 HFGPIMNE--GGSAVTLSYLAAER--VVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASA  234 (315)
T ss_dssp             HHSTTEEE--EEEEEEEEEGGGTS--CCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHH
T ss_pred             HHHHHHhc--CCEEEEEecccccc--cCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhh
Confidence            99999965  38999999999887  66666 58999999999999999999985 89999999999999998654

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-34  Score=236.41  Aligned_cols=184  Identities=27%  Similarity=0.328  Sum_probs=156.9

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++    ++  ...+.+|++|.  +.++++.+.++
T Consensus         4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~--~~~~~~D~~~~--~~~~~~~~~~~   75 (244)
T 1cyd_A            4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PG--IEPVCVDLGDW--DATEKALGGIG   75 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TT--CEEEECCTTCH--HHHHHHHTTCC
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cC--CCcEEecCCCH--HHHHHHHHHcC
Confidence            356999999999999999999999999999999999988776655432    12  34558999875  33444444333


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCchhc
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                        ++|++|||||....  .++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..  +.++...|
T Consensus        76 --~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~~~~~~Y  149 (244)
T 1cyd_A           76 --PVDLLVNNAALVIM--QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV--TFPNLITY  149 (244)
T ss_dssp             --CCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS--CCTTBHHH
T ss_pred             --CCCEEEECCcccCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcC--CCCCcchh
Confidence              47799999998753  5577889999999999999999999999999998776 79999999999887  66788999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      ++||++++.|+++++.|+.++||++++++||++.|++.+
T Consensus       150 ~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~  188 (244)
T 1cyd_A          150 SSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGK  188 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcccc
Confidence            999999999999999999999999999999999999865

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=3e-34  Score=256.82  Aligned_cols=190  Identities=22%  Similarity=0.301  Sum_probs=157.6

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      ++||+++||||++|||+++|++|+++|++|++++|+... ++..+...+.    ....+.+|++|.  +++.++++.+.+
T Consensus       211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~~----~~~~~~~Dvtd~~~v~~~~~~~~~~~  285 (454)
T 3u0b_A          211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKV----GGTALTLDVTADDAVDKITAHVTEHH  285 (454)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHHH----TCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHc----CCeEEEEecCCHHHHHHHHHHHHHHc
Confidence            579999999999999999999999999999999997532 2222222222    235788999874  466667777776


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ++ ++|++|||||+...  .++.+.+.++|++++++|+.|+++++++++|.|++++.|+||++||.++..  +.++...|
T Consensus       286 g~-~id~lV~nAGv~~~--~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~--g~~g~~~Y  360 (454)
T 3u0b_A          286 GG-KVDILVNNAGITRD--KLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIA--GNRGQTNY  360 (454)
T ss_dssp             TT-CCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHH--CCTTCHHH
T ss_pred             CC-CceEEEECCcccCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCC--CCCCCHHH
Confidence            64 36699999999754  568899999999999999999999999999999888889999999999998  77899999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      ++||+|+++|+++++.|+.++||+||+|+||+++|+|.+...
T Consensus       361 aasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~  402 (454)
T 3u0b_A          361 ATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIP  402 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-------
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcc
Confidence            999999999999999999999999999999999999987643

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=4.1e-34  Score=239.75  Aligned_cols=190  Identities=23%  Similarity=0.276  Sum_probs=165.6

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeC-ChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERI  124 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~  124 (255)
                      .+++++|+++||||++|||++++++|+++|++|++++| +.+++++..+++.+.  +.++..+.+|++|.  +++.++++
T Consensus        16 ~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~   93 (274)
T 1ja9_A           16 SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADISKPSEVVALFDKA   93 (274)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            44577999999999999999999999999999999999 778888777777664  34678889999973  45666777


Q ss_pred             HHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccc-ccCCCC
Q 025260          125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAI-VIPSDP  203 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~-~~~~~~  203 (255)
                      .+.++  ++|++|||||....  .++.+.+.++|++.+++|+.++++++++++|.|+ ++ |+||++||..+. .  +.+
T Consensus        94 ~~~~~--~~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~-~~iv~~sS~~~~~~--~~~  165 (274)
T 1ja9_A           94 VSHFG--GLDFVMSNSGMEVW--CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR-RG-GRIILTSSIAAVMT--GIP  165 (274)
T ss_dssp             HHHHS--CEEEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE-EE-EEEEEECCGGGTCC--SCC
T ss_pred             HHHcC--CCCEEEECCCCCCC--cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-hC-CEEEEEcChHhccC--CCC
Confidence            77777  46799999998753  4577889999999999999999999999999987 33 899999999887 5  567


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      +...|++||++++.|+++++.|+...||++++++||++.|++.+
T Consensus       166 ~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~  209 (274)
T 1ja9_A          166 NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFD  209 (274)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchh
Confidence            78999999999999999999999999999999999999999876

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=1.2e-34  Score=240.71  Aligned_cols=181  Identities=17%  Similarity=0.118  Sum_probs=151.5

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      .+..+|+++||||++|||+++|++|+++|++|++++|++++.++              ..+.+|++|.  +++.++++.+
T Consensus        18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~--------------~~~~~d~~d~~~v~~~~~~~~~   83 (251)
T 3orf_A           18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD--------------HSFTIKDSGEEEIKSVIEKINS   83 (251)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS--------------EEEECSCSSHHHHHHHHHHHHT
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc--------------cceEEEeCCHHHHHHHHHHHHH
Confidence            34558999999999999999999999999999999999875321              2466777763  4555566665


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .++  ++|+||||||+... ..++.+.+.++|++.+++|+.|++.++++++|.|++  +|+||++||..+..  +.++..
T Consensus        84 ~~g--~iD~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~--~~~~~~  156 (251)
T 3orf_A           84 KSI--KVDTFVCAAGGWSG-GNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALN--RTSGMI  156 (251)
T ss_dssp             TTC--CEEEEEECCCCCCC-BCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGS--CCTTBH
T ss_pred             HcC--CCCEEEECCccCCC-CCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechhhcc--CCCCCc
Confidence            555  57799999998754 233667889999999999999999999999999865  58999999999988  778899


Q ss_pred             hchHHHHHHHHHHHHHHHHHc--cCCceEEEeeeeeeeeCCcchhh
Q 025260          207 VYAATKAYIDQFSRSLYVEYR--KSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~--~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      .|++||+|+++|+++++.|++  ++||+||+|+||+++|++.+...
T Consensus       157 ~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~  202 (251)
T 3orf_A          157 AYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYM  202 (251)
T ss_dssp             HHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHC
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhc
Confidence            999999999999999999986  88999999999999999976643

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=1e-32  Score=230.90  Aligned_cols=187  Identities=21%  Similarity=0.227  Sum_probs=156.8

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHH-cCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHh
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAK-TGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAI  128 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~-~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~  128 (255)
                      ++|+++||||++|||++++++|++ +|++|++++|+.++.++..+++.+.  +.++..+.+|++|  +++++++++.+.+
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDIDDLQSIRALRDFLRKEY   80 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence            489999999999999999999999 9999999999999888888888765  3456788999997  3566777777777


Q ss_pred             cCCCccEEEEecCCCCCcccccccCC-HHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc--------
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVD-QVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI--------  199 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~-~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~--------  199 (255)
                      +  ++|+||||||....  . ..+.+ .+++++.+++|+.+++++++.++|.|++  .|+||++||..+...        
T Consensus        81 g--~id~li~~Ag~~~~--~-~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~~~  153 (276)
T 1wma_A           81 G--GLDVLVNNAGIAFK--V-ADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPEL  153 (276)
T ss_dssp             S--SEEEEEECCCCCCC--T-TCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHH
T ss_pred             C--CCCEEEECCccccc--C-CCccccHHHHHhhhheeeeeHHHHHHHHHHhhCC--CCEEEEECChhhhcccccCChhH
Confidence            6  46799999998643  2 22334 5889999999999999999999998864  489999999877631        


Q ss_pred             --------------------------------CCCCCchhchHHHHHHHHHHHHHHHHHcc----CCceEEEeeeeeeee
Q 025260          200 --------------------------------PSDPLYSVYAATKAYIDQFSRSLYVEYRK----SGIDVQCQVLFLLCF  243 (255)
Q Consensus       200 --------------------------------~~~~~~~~Y~asK~al~~~~~~l~~e~~~----~gi~v~~v~Pg~v~T  243 (255)
                                                      ++.| ...|++||+|++.|++.++.|+.+    .||+|++|+||++.|
T Consensus       154 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t  232 (276)
T 1wma_A          154 QQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWP-SSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRT  232 (276)
T ss_dssp             HHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCC-SCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCS
T ss_pred             HhhccccccchhhhhhhhhhhhhhhcccccccCCCc-cchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCcccc
Confidence                                            0112 278999999999999999999987    799999999999999


Q ss_pred             CCcch
Q 025260          244 YNLND  248 (255)
Q Consensus       244 ~~~~~  248 (255)
                      +|.+.
T Consensus       233 ~~~~~  237 (276)
T 1wma_A          233 DMAGP  237 (276)
T ss_dssp             TTTCT
T ss_pred             CcCCc
Confidence            99764

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=4.8e-33  Score=245.07  Aligned_cols=194  Identities=10%  Similarity=0.058  Sum_probs=157.5

Q ss_pred             cCCcEEEEECCCCchHHH--HHHHHHHcCCcEEEEeCChhh------------HHHHHHHHHhhcCCceEEEEEEECCCC
Q 025260           51 KYGSWALVTGPTDGIGKS--FAFQLAKTGLNLVLVGRNPDK------------LKDVSDSIQAKYAKTQIKSVVVDFSGD  116 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~--la~~la~~G~~V~l~~r~~~~------------~~~~~~~~~~~~~~~~~~~~~~d~~~~  116 (255)
                      ..||+++||||++|||++  ++++|+++|++|++++|+...            .+...+...+.  +.++..+.+|+++.
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~Dvtd~  135 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKK--GLVAKNFIEDAFSN  135 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTCH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHc--CCcEEEEEeeCCCH
Confidence            569999999999999999  999999999999999997643            23333333333  45678899999983


Q ss_pred             --cHHHHHHHHHHhcCCCccEEEEecCCCCC-----------ccccc---------------------ccCCHHHHHhHh
Q 025260          117 --LDEGVERIKEAIEGLDVGVLINNVGISYP-----------YARFF---------------------HEVDQVLLKNLI  162 (255)
Q Consensus       117 --~~~~~~~~~~~~~~~~id~lv~nag~~~~-----------~~~~~---------------------~~~~~~~~~~~~  162 (255)
                        ++++++++.+.++  .+|+||||||....           ..+++                     .+.+.++|++++
T Consensus       136 ~~v~~~v~~i~~~~G--~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~  213 (418)
T 4eue_A          136 ETKDKVIKYIKDEFG--KIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETR  213 (418)
T ss_dssp             HHHHHHHHHHHHTTC--CEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcC--CCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHH
Confidence              5667777777776  57799999997410           01222                     467999999999


Q ss_pred             HHhhhHHH-HHHHHHhhhhhhCCCcEEEEECCccccccCCCCCc--hhchHHHHHHHHHHHHHHHHHcc-CCceEEEeee
Q 025260          163 KVNVEGTT-KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY--SVYAATKAYIDQFSRSLYVEYRK-SGIDVQCQVL  238 (255)
Q Consensus       163 ~~N~~~~~-~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~--~~Y~asK~al~~~~~~l~~e~~~-~gi~v~~v~P  238 (255)
                      ++|..+.+ .+++++.+.+..+++|+||++||.++..  +.|.+  +.|++||+|+.+|+++|+.|+++ +||+||+|+|
T Consensus       214 ~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~--~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~P  291 (418)
T 4eue_A          214 KVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPR--TYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVN  291 (418)
T ss_dssp             HHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGG--GTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred             HHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcC--CCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEEC
Confidence            99999988 7778877655445579999999999988  66777  99999999999999999999999 9999999999


Q ss_pred             eeeeeCCcchhh
Q 025260          239 FLLCFYNLNDLV  250 (255)
Q Consensus       239 g~v~T~~~~~~~  250 (255)
                      |+|.|++.+.+.
T Consensus       292 G~v~T~~s~~ip  303 (418)
T 4eue_A          292 KALVTKASAYIP  303 (418)
T ss_dssp             CCCCCHHHHTST
T ss_pred             CcCcChhhhcCC
Confidence            999999887653

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.7e-32  Score=224.60  Aligned_cols=176  Identities=23%  Similarity=0.228  Sum_probs=148.9

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~  130 (255)
                      +|+++||||++|||++++++|+++|++|++++|+.+ .             ..+..+.+|++|.  +++.++++ +.++ 
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-------------~~~~~~~~D~~~~~~~~~~~~~~-~~~~-   65 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-------------EDLIYVEGDVTREEDVRRAVARA-QEEA-   65 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-------------SSSEEEECCTTCHHHHHHHHHHH-HHHS-
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-------------cceEEEeCCCCCHHHHHHHHHHH-HhhC-
Confidence            789999999999999999999999999999999865 1             1236788999973  45566666 5555 


Q ss_pred             CCccEEEEecCCCCCcccccccC----CHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC---C---cEEEEECCccccccC
Q 025260          131 LDVGVLINNVGISYPYARFFHEV----DQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK---K---GAIVNIGSGAAIVIP  200 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~----~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~---~---g~iv~vsS~~~~~~~  200 (255)
                       ++|++|||||....  .++.+.    +.+++++.+++|+.+++.++++++|.|++++   .   |+||++||..+..  
T Consensus        66 -~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--  140 (242)
T 1uay_A           66 -PLFAVVSAAGVGLA--EKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE--  140 (242)
T ss_dssp             -CEEEEEECCCCCCC--CCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH--
T ss_pred             -CceEEEEcccccCc--ccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc--
Confidence             57799999998654  334443    4458999999999999999999999998764   3   4999999999887  


Q ss_pred             CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          201 SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       201 ~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      +.++...|++||+|++.++++++.|++++||+|++++||++.|++.+..
T Consensus       141 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~  189 (242)
T 1uay_A          141 GQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL  189 (242)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS
T ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhcc
Confidence            6678899999999999999999999999999999999999999987643

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.97  E-value=9.2e-33  Score=229.65  Aligned_cols=168  Identities=18%  Similarity=0.182  Sum_probs=130.1

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh-cCCC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI-EGLD  132 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~  132 (255)
                      |+++||||++|||+++|++|+++|++|++++|+++++++            .   +.+|+++.  +.++++.+.+ +  +
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------------~---~~~Dl~~~--~~v~~~~~~~~~--~   62 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------------D---LSTAEGRK--QAIADVLAKCSK--G   62 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------------C---TTSHHHHH--HHHHHHHTTCTT--C
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------------c---cccCCCCH--HHHHHHHHHhCC--C
Confidence            689999999999999999999999999999998764321            0   34555543  3334444433 3  5


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc-------------
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI-------------  199 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~-------------  199 (255)
                      +|+||||||+....         +.|++.+++|+.++++++++++|.|++++.|+||++||..+...             
T Consensus        63 id~lv~~Ag~~~~~---------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  133 (257)
T 1fjh_A           63 MDGLVLCAGLGPQT---------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEA  133 (257)
T ss_dssp             CSEEEECCCCCTTC---------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHH
T ss_pred             CCEEEECCCCCCCc---------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcc
Confidence            77999999986411         12789999999999999999999998888899999999988721             


Q ss_pred             -------------CCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          200 -------------PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       200 -------------~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                                   .+.++...|++||+|++.|+++++.|+.++||+||+|+||++.|++.+..
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  196 (257)
T 1fjh_A          134 GEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAG  196 (257)
T ss_dssp             TCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------
T ss_pred             cchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhh
Confidence                         13456789999999999999999999999999999999999999998754

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.97  E-value=2.8e-30  Score=256.73  Aligned_cols=193  Identities=16%  Similarity=0.197  Sum_probs=158.2

Q ss_pred             ccccCCcEEEEECCCCc-hHHHHHHHHHHcCCcEEEE-eCChhhHHHHHHHHHhhcC--CceEEEEEEECCCC--cHHHH
Q 025260           48 NLRKYGSWALVTGPTDG-IGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYA--KTQIKSVVVDFSGD--LDEGV  121 (255)
Q Consensus        48 ~~~~~gk~vlITGas~g-IG~~la~~la~~G~~V~l~-~r~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~--~~~~~  121 (255)
                      .++++||++|||||++| ||+++|++|+++|++|+++ +|+.+++++..+++.+..+  +.++.++.+|++|.  +++.+
T Consensus       670 ~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv  749 (1887)
T 2uv8_A          670 GVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI  749 (1887)
T ss_dssp             CBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHH
Confidence            34577999999999998 9999999999999999998 6888888887777755432  45788999999984  34455


Q ss_pred             HHHHHH---hcCC-CccEEEEecCCCCCccc-ccccCC--HHHHHhHhHHhhhHHHHHHHHH--hhhhhhCCCcEEEEEC
Q 025260          122 ERIKEA---IEGL-DVGVLINNVGISYPYAR-FFHEVD--QVLLKNLIKVNVEGTTKVTQAV--LPGMLKRKKGAIVNIG  192 (255)
Q Consensus       122 ~~~~~~---~~~~-~id~lv~nag~~~~~~~-~~~~~~--~~~~~~~~~~N~~~~~~l~~~~--lp~~~~~~~g~iv~vs  192 (255)
                      +.+.+.   ++-. ++|+||||||+...  . ++.+.+  .++|+++|++|+.+++.+++.+  +|.|++++.|+||++|
T Consensus       750 ~~i~~~~~~~G~G~~LDiLVNNAGi~~~--~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnIS  827 (1887)
T 2uv8_A          750 EFIYDTEKNGGLGWDLDAIIPFAAIPEQ--GIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMS  827 (1887)
T ss_dssp             HHHHSCTTTTSCCCCCSEEEECCCCCCC--SBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEEC
T ss_pred             HHHHHhccccccCCCCeEEEECCCcCCC--CCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEc
Confidence            555544   1111 47799999998754  4 678888  8999999999999999999998  8989877779999999


Q ss_pred             CccccccCCCCCchhchHHHHHHHHH-HHHHHHHHccCCceEEEeeeeeee-eCCcc
Q 025260          193 SGAAIVIPSDPLYSVYAATKAYIDQF-SRSLYVEYRKSGIDVQCQVLFLLC-FYNLN  247 (255)
Q Consensus       193 S~~~~~~~~~~~~~~Y~asK~al~~~-~~~l~~e~~~~gi~v~~v~Pg~v~-T~~~~  247 (255)
                      |..+..  +  +...|++||+|+.+| ++.++.|+.+. |+||+|+||+++ |+|.+
T Consensus       828 S~ag~~--g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~  879 (1887)
T 2uv8_A          828 PNHGTF--G--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMS  879 (1887)
T ss_dssp             SCTTCS--S--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC----
T ss_pred             ChHhcc--C--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccc
Confidence            999877  3  578999999999999 99999999887 999999999999 88865

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.97  E-value=9.5e-31  Score=210.46  Aligned_cols=173  Identities=20%  Similarity=0.287  Sum_probs=144.2

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      |+++||||++|||++++++|+++  +|++++|+++++++..+++.    .   ..+.+|++|.  +.++++.+.++  ++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~----~---~~~~~D~~~~--~~~~~~~~~~~--~i   67 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG----A---RALPADLADE--LEAKALLEEAG--PL   67 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT----C---EECCCCTTSH--HHHHHHHHHHC--SE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc----C---cEEEeeCCCH--HHHHHHHHhcC--CC
Confidence            57999999999999999999998  99999999888777665542    1   6788999874  33444444344  57


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHHHH
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKA  213 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~asK~  213 (255)
                      |++|||||....  .++.+.+.+++++.+++|+.+++++++++    ++++.++||++||..+..  +.++...|++||+
T Consensus        68 d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~~~--~~~~~~~Y~~sK~  139 (207)
T 2yut_A           68 DLLVHAVGKAGR--ASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPRYV--QVPGFAAYAAAKG  139 (207)
T ss_dssp             EEEEECCCCCCC--BCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHHHH--SSTTBHHHHHHHH
T ss_pred             CEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhhcc--CCCCcchHHHHHH
Confidence            799999998743  55778888999999999999999999998    334568999999999887  6678899999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          214 YIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       214 al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      +++.++++++.|++++|+++++++||++.|++..
T Consensus       140 a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~  173 (207)
T 2yut_A          140 ALEAYLEAARKELLREGVHLVLVRLPAVATGLWA  173 (207)
T ss_dssp             HHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGG
T ss_pred             HHHHHHHHHHHHHhhhCCEEEEEecCcccCCCcc
Confidence            9999999999999999999999999999999854

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.97  E-value=3.9e-30  Score=233.87  Aligned_cols=185  Identities=16%  Similarity=0.157  Sum_probs=152.6

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCc-EEEE-eCC-------------hhhHHHHHHHHHhhcCCceEEEEEEECCC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLV-GRN-------------PDKLKDVSDSIQAKYAKTQIKSVVVDFSG  115 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~-V~l~-~r~-------------~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  115 (255)
                      .+++++|||||++|||+++|++|+++|++ |+++ +|+             .+++++..+++.+.  +.++.++.||++|
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvtd  326 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL--GATATVVTCDLTD  326 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH--TCEEEEEECCTTS
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc--CCEEEEEECCCCC
Confidence            35899999999999999999999999997 7777 898             35566777777765  4578999999998


Q ss_pred             CcHHHHHHHHHHhcC-CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECC
Q 025260          116 DLDEGVERIKEAIEG-LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGS  193 (255)
Q Consensus       116 ~~~~~~~~~~~~~~~-~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS  193 (255)
                      .  +.++++.+...+ .++|+||||||+...  .++.+.+.+++++++++|+.|++++.+.+.|.|++++ .++||++||
T Consensus       327 ~--~~v~~~~~~i~~~g~id~vVh~AGv~~~--~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS  402 (525)
T 3qp9_A          327 A--EAAARLLAGVSDAHPLSAVLHLPPTVDS--EPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSS  402 (525)
T ss_dssp             H--HHHHHHHHTSCTTSCEEEEEECCCCCCC--CCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEE
T ss_pred             H--HHHHHHHHHHHhcCCCcEEEECCcCCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECC
Confidence            5  444444443321 268899999999764  6688999999999999999999999999999997776 789999999


Q ss_pred             ccccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          194 GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       194 ~~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      .++..  +.++...|++||+++++|+    .+++..|+++++|+||+++|+|..
T Consensus       403 ~a~~~--g~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~  450 (525)
T 3qp9_A          403 VAAIW--GGAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVT  450 (525)
T ss_dssp             GGGTT--CCTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGG
T ss_pred             HHHcC--CCCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCcccccccc
Confidence            99998  7889999999999998874    567778999999999999999983

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.97  E-value=1.5e-30  Score=208.72  Aligned_cols=164  Identities=15%  Similarity=0.157  Sum_probs=142.1

Q ss_pred             Cc-EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           53 GS-WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        53 gk-~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      +| +++||||++|||++++++|+ +|++|++++|+++                   .+.+|+++.  +.++++.+.++  
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~--~~~~~~~~~~~--   57 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNI--DSIKKMYEQVG--   57 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCH--HHHHHHHHHHC--
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCH--HHHHHHHHHhC--
Confidence            44 79999999999999999999 9999999999864                   367899874  44455555554  


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHH
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAAT  211 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~as  211 (255)
                      ++|++|||||....  .++.+.+.++|++.+++|+.+++++++++.|.|.+  +++||++||..+..  +.++...|++|
T Consensus        58 ~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~~sS~~~~~--~~~~~~~Y~~s  131 (202)
T 3d7l_A           58 KVDAIVSATGSATF--SPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND--KGSFTLTTGIMMED--PIVQGASAAMA  131 (202)
T ss_dssp             CEEEEEECCCCCCC--CCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE--EEEEEEECCGGGTS--CCTTCHHHHHH
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc--CCEEEEEcchhhcC--CCCccHHHHHH
Confidence            57799999998643  45778899999999999999999999999998854  38999999998877  67888999999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          212 KAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       212 K~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      |++++.++++++.|+ +.|+++++++||++.|++.+
T Consensus       132 K~~~~~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~~  166 (202)
T 3d7l_A          132 NGAVTAFAKSAAIEM-PRGIRINTVSPNVLEESWDK  166 (202)
T ss_dssp             HHHHHHHHHHHTTSC-STTCEEEEEEECCBGGGHHH
T ss_pred             HHHHHHHHHHHHHHc-cCCeEEEEEecCccCCchhh
Confidence            999999999999999 78999999999999999743

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.97  E-value=1.7e-30  Score=251.29  Aligned_cols=194  Identities=16%  Similarity=0.214  Sum_probs=159.8

Q ss_pred             cccccCCcEEEEECCCCc-hHHHHHHHHHHcCCcEEEE-eCChhhHHHHHHHHHhhcC--CceEEEEEEECCCC--cHHH
Q 025260           47 KNLRKYGSWALVTGPTDG-IGKSFAFQLAKTGLNLVLV-GRNPDKLKDVSDSIQAKYA--KTQIKSVVVDFSGD--LDEG  120 (255)
Q Consensus        47 ~~~~~~gk~vlITGas~g-IG~~la~~la~~G~~V~l~-~r~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~--~~~~  120 (255)
                      ..++++||+++||||++| ||+++|++|+++|++|+++ +|+.+++++..+++.+..+  +.++..+.+|++|.  +++.
T Consensus       470 ~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaL  549 (1688)
T 2pff_A          470 XXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL  549 (1688)
T ss_dssp             SCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHH
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHH
Confidence            445678999999999998 9999999999999999998 6887777777777644322  35688999999985  3444


Q ss_pred             HHHHHHH-----hcCCCccEEEEecCCCCCccc-ccccCC--HHHHHhHhHHhhhHHHHHHHHH--hhhhhhCCCcEEEE
Q 025260          121 VERIKEA-----IEGLDVGVLINNVGISYPYAR-FFHEVD--QVLLKNLIKVNVEGTTKVTQAV--LPGMLKRKKGAIVN  190 (255)
Q Consensus       121 ~~~~~~~-----~~~~~id~lv~nag~~~~~~~-~~~~~~--~~~~~~~~~~N~~~~~~l~~~~--lp~~~~~~~g~iv~  190 (255)
                      ++++.+.     ++. ++|+||||||+...  . ++.+.+  .++|++++++|+.+++.+++.+  +|.|++++.|+||+
T Consensus       550 Ve~I~e~~~~~GfG~-~IDILVNNAGI~~~--g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVn  626 (1688)
T 2pff_A          550 IEFIYDTEKNGGLGW-DLDAIIPFAAIPEQ--GIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILP  626 (1688)
T ss_dssp             HHHHHSCTTSSSCCC-CCCEEECCCCCCCC--SBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCC
T ss_pred             HHHHHHhccccccCC-CCeEEEECCCcCCC--CCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEE
Confidence            5555443     320 47799999998654  3 577888  8999999999999999999999  88898777799999


Q ss_pred             ECCccccccCCCCCchhchHHHHHHHHH-HHHHHHHHccCCceEEEeeeeeee-eCCcch
Q 025260          191 IGSGAAIVIPSDPLYSVYAATKAYIDQF-SRSLYVEYRKSGIDVQCQVLFLLC-FYNLND  248 (255)
Q Consensus       191 vsS~~~~~~~~~~~~~~Y~asK~al~~~-~~~l~~e~~~~gi~v~~v~Pg~v~-T~~~~~  248 (255)
                      +||.++..  +  +...|++||+|+.+| .+.++.|+++. |+||+|+||+++ |+|.+.
T Consensus       627 ISSiAG~~--G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~  681 (1688)
T 2pff_A          627 MSPNHGTF--G--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSA  681 (1688)
T ss_dssp             CCSCTTTS--S--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCT
T ss_pred             EEChHhcc--C--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCC
Confidence            99998877  3  578999999999999 78888888876 999999999999 788653

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.96  E-value=2.3e-29  Score=249.78  Aligned_cols=193  Identities=16%  Similarity=0.199  Sum_probs=156.7

Q ss_pred             ccccCCcEEEEECCCCc-hHHHHHHHHHHcCCcEEEEe-CChhhHHHHHHHHHhhcC--CceEEEEEEECCCC--cHHHH
Q 025260           48 NLRKYGSWALVTGPTDG-IGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYA--KTQIKSVVVDFSGD--LDEGV  121 (255)
Q Consensus        48 ~~~~~gk~vlITGas~g-IG~~la~~la~~G~~V~l~~-r~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~--~~~~~  121 (255)
                      .++++||++|||||++| ||+++|++|+++|++|++++ |+.+++++..+++.+...  +.++..+.||++|.  +++.+
T Consensus       647 ~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv  726 (1878)
T 2uv9_A          647 GLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALV  726 (1878)
T ss_dssp             CBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHH
Confidence            34577999999999999 99999999999999999995 777777777766644322  45788999999984  34444


Q ss_pred             HHHHHH---hcCCCccEEEEecCCCCCccc-ccccCC--HHHHHhHhHHhhhHHHHHHHH--HhhhhhhCCCcEEEEECC
Q 025260          122 ERIKEA---IEGLDVGVLINNVGISYPYAR-FFHEVD--QVLLKNLIKVNVEGTTKVTQA--VLPGMLKRKKGAIVNIGS  193 (255)
Q Consensus       122 ~~~~~~---~~~~~id~lv~nag~~~~~~~-~~~~~~--~~~~~~~~~~N~~~~~~l~~~--~lp~~~~~~~g~iv~vsS  193 (255)
                      +++.+.   ++. ++|+||||||+...  . ++.+.+  .++|+++|++|+.+++.+++.  ++|.|++++.|+||++||
T Consensus       727 ~~i~~~~~~~G~-~IDiLVnNAGi~~~--~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS  803 (1878)
T 2uv9_A          727 NYIYDTKNGLGW-DLDYVVPFAAIPEN--GREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSP  803 (1878)
T ss_dssp             HHHHCSSSSCCC-CCSEEEECCCCCCT--TCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECS
T ss_pred             HHHHHhhcccCC-CCcEEEeCcccccC--CCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcc
Confidence            444443   330 47799999998754  3 678888  899999999999999999987  778887777799999999


Q ss_pred             ccccccCCCCCchhchHHHHHHHHHHHHHHHH-HccCCceEEEeeeeeee-eCCcch
Q 025260          194 GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE-YRKSGIDVQCQVLFLLC-FYNLND  248 (255)
Q Consensus       194 ~~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e-~~~~gi~v~~v~Pg~v~-T~~~~~  248 (255)
                      .++..  +  +...|++||+|+.+|++.++.| +++. |+||+|+||+++ |+|.+.
T Consensus       804 ~ag~~--g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~  855 (1878)
T 2uv9_A          804 NHGTF--G--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSA  855 (1878)
T ss_dssp             CSSSS--S--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSH
T ss_pred             hhhcc--C--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCccccc
Confidence            99877  3  4679999999999999877665 7665 999999999999 999764

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.96  E-value=3.3e-28  Score=230.74  Aligned_cols=179  Identities=18%  Similarity=0.269  Sum_probs=152.8

Q ss_pred             CCcEEEEECCCCchHHHHHHHHH-HcCC-cEEEEeCC---hhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLA-KTGL-NLVLVGRN---PDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKE  126 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la-~~G~-~V~l~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  126 (255)
                      .+|+++||||++|||+++|++|+ ++|+ +|++++|+   .++.++..+++++.  +.++..+.||++|.  +.++++.+
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--G~~v~~~~~Dvsd~--~~v~~~~~  604 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY--GAEVSLQACDVADR--ETLAKVLA  604 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCH--HHHHHHHH
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc--CCcEEEEEeecCCH--HHHHHHHH
Confidence            48999999999999999999999 7999 59999999   45577777888765  56789999999985  44444444


Q ss_pred             Hhc-CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCc
Q 025260          127 AIE-GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       127 ~~~-~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~  205 (255)
                      ... ..++|+||||||+...  .++.+++.++|++++++|+.|++++.+++.|.|      +||++||.++..  +.++.
T Consensus       605 ~~~~~~~id~lVnnAGv~~~--~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~ag~~--g~~g~  674 (795)
T 3slk_A          605 SIPDEHPLTAVVHAAGVLDD--GVSESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVL--GSGGQ  674 (795)
T ss_dssp             TSCTTSCEEEEEECCCCCCC--CCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEETHHHH--TCSSC
T ss_pred             HHHHhCCCEEEEECCCcCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccHHhcC--CCCCC
Confidence            332 2378999999999865  678999999999999999999999999998877      699999999998  88999


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ..|++||+    |.++|++|++++||++|+|+||++.|++...
T Consensus       675 ~~YaAaka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~  713 (795)
T 3slk_A          675 GNYAAANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMAS  713 (795)
T ss_dssp             HHHHHHHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHH
T ss_pred             HHHHHHHH----HHHHHHHHHHHcCCeEEEEECCeECcchhhc
Confidence            99999995    7777788888889999999999999986543

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.95  E-value=1.6e-27  Score=214.78  Aligned_cols=179  Identities=20%  Similarity=0.250  Sum_probs=147.6

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh---hhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP---DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      ++++|||||++|||+++|++|+++|+ +|++++|+.   +..++..+++.+.  +.++.++.||++|.  +.++++.+.+
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~--~~v~~~~~~i  314 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL--GVRVTIAACDAADR--EALAALLAEL  314 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCH--HHHHHHHHTC
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc--CCeEEEEEccCCCH--HHHHHHHHHH
Confidence            49999999999999999999999999 899999974   3466777777665  46789999999985  4444444433


Q ss_pred             cC-CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          129 EG-LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       129 ~~-~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      .. .++|++|||||+... ..++.+.+.++|++++++|+.|++++.+.+.+.    ..++||++||.++..  +.++...
T Consensus       315 ~~~g~ld~vVh~AGv~~~-~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~----~~~~iV~~SS~a~~~--g~~g~~~  387 (496)
T 3mje_A          315 PEDAPLTAVFHSAGVAHD-DAPVADLTLGQLDALMRAKLTAARHLHELTADL----DLDAFVLFSSGAAVW--GSGGQPG  387 (496)
T ss_dssp             CTTSCEEEEEECCCCCCS-CCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS----CCSEEEEEEEHHHHT--TCTTCHH
T ss_pred             HHhCCCeEEEECCcccCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc----CCCEEEEEeChHhcC--CCCCcHH
Confidence            22 368899999999732 256889999999999999999999999987764    457899999999998  7789999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                      |++||+++++|++.    ++..|+++++|+||++.|+..
T Consensus       388 YaAaKa~ldala~~----~~~~Gi~v~sV~pG~w~~~gm  422 (496)
T 3mje_A          388 YAAANAYLDALAEH----RRSLGLTASSVAWGTWGEVGM  422 (496)
T ss_dssp             HHHHHHHHHHHHHH----HHHTTCCCEEEEECEESSSCC
T ss_pred             HHHHHHHHHHHHHH----HHhcCCeEEEEECCcccCCcc
Confidence            99999999888774    445699999999999976554

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.95  E-value=1.1e-28  Score=204.21  Aligned_cols=169  Identities=17%  Similarity=0.183  Sum_probs=135.8

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      |+++||||+||||++++++|+++|++|++++|+.++.+.               .+.+|+++.  +.++++.+.+. .++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------------~~~~D~~~~--~~~~~~~~~~~-~~~   63 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA---------------DLSTPGGRE--TAVAAVLDRCG-GVL   63 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------------CTTSHHHHH--HHHHHHHHHHT-TCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc---------------cccCCcccH--HHHHHHHHHcC-CCc
Confidence            579999999999999999999999999999998764321               134455442  33444444441 157


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCC------------
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS------------  201 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~------------  201 (255)
                      |+||||||....         .+.+++.+++|+.++++++++++|.|++++.++||++||..+.....            
T Consensus        64 d~vi~~Ag~~~~---------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~  134 (255)
T 2dkn_A           64 DGLVCCAGVGVT---------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAG  134 (255)
T ss_dssp             SEEEECCCCCTT---------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHT
T ss_pred             cEEEECCCCCCc---------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhccc
Confidence            799999997532         11278899999999999999999999887789999999998876210            


Q ss_pred             ------------CCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          202 ------------DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       202 ------------~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                                  .++...|++||++++.+++.+++|+.+.|+++++++||++.|++.+..
T Consensus       135 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~  194 (255)
T 2dkn_A          135 DEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQAS  194 (255)
T ss_dssp             CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHH
T ss_pred             chhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhc
Confidence                        145678999999999999999999998999999999999999987654

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.94  E-value=1.3e-25  Score=203.36  Aligned_cols=180  Identities=17%  Similarity=0.193  Sum_probs=149.3

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChh---hHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPD---KLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      .+++++||||++|||++++++|+++|+ +|++++|+..   ..++..+++.+.  +.++.++.||++|.  +.++++.+.
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~--~~v~~~~~~  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGH--GCEVVHAACDVAER--DALAALVTA  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTT--TCEEEEEECCSSCH--HHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhc--CCEEEEEEeCCCCH--HHHHHHHhc
Confidence            479999999999999999999999999 6999999874   456666777654  45788999999985  444444443


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                         .++|+||||||+...  ..+.+.+.+++++++++|+.|++++.+.+.+.   .+.++||++||.++..  +.++...
T Consensus       334 ---~~ld~VVh~AGv~~~--~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---~~~~~~V~~SS~a~~~--g~~g~~~  403 (511)
T 2z5l_A          334 ---YPPNAVFHTAGILDD--AVIDTLSPESFETVRGAKVCGAELLHQLTADI---KGLDAFVLFSSVTGTW--GNAGQGA  403 (511)
T ss_dssp             ---SCCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC---TTCCCEEEEEEGGGTT--CCTTBHH
T ss_pred             ---CCCcEEEECCcccCC--cccccCCHHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEEEeCHHhcC--CCCCCHH
Confidence               357799999998754  56788999999999999999999999887542   1457899999999988  7788999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeee-eeCCcchh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLL-CFYNLNDL  249 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v-~T~~~~~~  249 (255)
                      |+++|++++.|++.+    +..|+++++|+||++ .|+|....
T Consensus       404 YaaaKa~ld~la~~~----~~~gi~v~sv~pG~~~~tgm~~~~  442 (511)
T 2z5l_A          404 YAAANAALDALAERR----RAAGLPATSVAWGLWGGGGMAAGA  442 (511)
T ss_dssp             HHHHHHHHHHHHHHH----HTTTCCCEEEEECCBCSTTCCCCH
T ss_pred             HHHHHHHHHHHHHHH----HHcCCcEEEEECCcccCCcccccc
Confidence            999999999998865    356999999999999 88887653

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.94  E-value=1.3e-25  Score=202.54  Aligned_cols=180  Identities=19%  Similarity=0.206  Sum_probs=144.5

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCc-EEEEeCChh---hHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPD---KLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~-V~l~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      .+++++||||+||||++++++|+++|++ |++++|+..   ..++..+++.+.  +.++.++.+|++|.  +.++++.+.
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dv~d~--~~v~~~~~~  300 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDR--ESVRELLGG  300 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCH--HHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc--CCEEEEEEeCCCCH--HHHHHHHHH
Confidence            4799999999999999999999999995 999999875   456666777654  45788999999985  334444443


Q ss_pred             hcC-CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          128 IEG-LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       128 ~~~-~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      ... .++|++|||||+...  ..+.+.+.+++++++++|+.|++++.+.+.+    .+.++||++||.++..  +.++..
T Consensus       301 i~~~g~ld~VIh~AG~~~~--~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~~~~~V~~SS~a~~~--g~~g~~  372 (486)
T 2fr1_A          301 IGDDVPLSAVFHAAATLDD--GTVDTLTGERIERASRAKVLGARNLHELTRE----LDLTAFVLFSSFASAF--GAPGLG  372 (486)
T ss_dssp             SCTTSCEEEEEECCCCCCC--CCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SCCSEEEEEEEHHHHT--CCTTCT
T ss_pred             HHhcCCCcEEEECCccCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHhCc----CCCCEEEEEcChHhcC--CCCCCH
Confidence            321 268899999998754  5678899999999999999999999998755    3568999999999888  678899


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC-Ccc
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY-NLN  247 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~-~~~  247 (255)
                      .|+++|+++++|++.+    +..|+++++|+||++.++ |.+
T Consensus       373 ~Yaaaka~l~~la~~~----~~~gi~v~~i~pG~~~~~gm~~  410 (486)
T 2fr1_A          373 GYAPGNAYLDGLAQQR----RSDGLPATAVAWGTWAGSGMAE  410 (486)
T ss_dssp             TTHHHHHHHHHHHHHH----HHTTCCCEEEEECCBC------
T ss_pred             HHHHHHHHHHHHHHHH----HhcCCeEEEEECCeeCCCcccc
Confidence            9999999999886644    456999999999999886 543

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.93  E-value=2.6e-26  Score=237.74  Aligned_cols=188  Identities=14%  Similarity=0.125  Sum_probs=140.5

Q ss_pred             cCCcEEEEECCCCc-hHHHHHHHHHHcCCcEEEEeCChhh-----HHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHH
Q 025260           51 KYGSWALVTGPTDG-IGKSFAFQLAKTGLNLVLVGRNPDK-----LKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVE  122 (255)
Q Consensus        51 ~~gk~vlITGas~g-IG~~la~~la~~G~~V~l~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~  122 (255)
                      ++||+++||||++| ||+++|++|+++|++|++++|+.+.     ++++.+++...  +.++..+.+|++|.  +++.++
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~--G~~~~~v~~Dvtd~~~v~~lv~ 2211 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARF--DATLWVVPANMASYSDIDKLVE 2211 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCT--TCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhc--CCeEEEEEecCCCHHHHHHHHH
Confidence            67999999999999 9999999999999999999998776     45555554332  45688899999984  455555


Q ss_pred             HHHH----HhcCCCccEEEEecCCCC---CcccccccCCHHHH----HhHhHHhhhHHHHHHHHHhhhhhhCCCc----E
Q 025260          123 RIKE----AIEGLDVGVLINNVGISY---PYARFFHEVDQVLL----KNLIKVNVEGTTKVTQAVLPGMLKRKKG----A  187 (255)
Q Consensus       123 ~~~~----~~~~~~id~lv~nag~~~---~~~~~~~~~~~~~~----~~~~~~N~~~~~~l~~~~lp~~~~~~~g----~  187 (255)
                      ++.+    .++  .+|+||||||+..   +......+.+.++|    +..+++|+.+++.+++.+.|.|.+++.+    .
T Consensus      2212 ~i~~~~~~~fG--~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~i 2289 (3089)
T 3zen_D         2212 WVGTEQTESLG--PQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHV 2289 (3089)
T ss_dssp             HHTSCCEEEES--SSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEE
T ss_pred             HHHhhhhhhcC--CCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEE
Confidence            5555    445  4679999999821   11112233333444    4459999999999999999999876542    2


Q ss_pred             EEEECCccccccCCCCCchhchHHHHHHHHHHHHHHHH--HccCCceEEEeeeeeee-eCCcc
Q 025260          188 IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE--YRKSGIDVQCQVLFLLC-FYNLN  247 (255)
Q Consensus       188 iv~vsS~~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e--~~~~gi~v~~v~Pg~v~-T~~~~  247 (255)
                      +++.|+..+.    .++...|++||+|+.+|+++|+.|  ++ .+|+||+++||+++ |++..
T Consensus      2290 i~~~ss~~g~----~g~~~aYsASKaAl~~LtrslA~E~~~a-~~IrVn~v~PG~v~tT~l~~ 2347 (3089)
T 3zen_D         2290 VLPGSPNRGM----FGGDGAYGEAKSALDALENRWSAEKSWA-ERVSLAHALIGWTKGTGLMG 2347 (3089)
T ss_dssp             EEEECSSTTS----CSSCSSHHHHGGGHHHHHHHHHHCSTTT-TTEEEEEEECCCEECSTTTT
T ss_pred             EEECCccccc----CCCchHHHHHHHHHHHHHHHHHhccccC-CCeEEEEEeecccCCCcccc
Confidence            3334443332    244568999999999999999999  65 46999999999999 77654

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.93  E-value=1.5e-25  Score=187.40  Aligned_cols=162  Identities=17%  Similarity=0.170  Sum_probs=131.4

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      ++|+++||||+||||++++++|+++|++|++++|++.+.+           ...+..+.+|++|.     +.+.+.+.  
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~-----~~~~~~~~--   63 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-----------GPNEECVQCDLADA-----NAVNAMVA--   63 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-----------CTTEEEEECCTTCH-----HHHHHHHT--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-----------CCCCEEEEcCCCCH-----HHHHHHHc--
Confidence            3689999999999999999999999999999999976432           34678899999975     34444444  


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc----------CC
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI----------PS  201 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~----------~~  201 (255)
                      ++|+||||||...          .+.|++.+++|+.|++++++++.    +++.++||++||..++..          .+
T Consensus        64 ~~D~vi~~Ag~~~----------~~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~  129 (267)
T 3rft_A           64 GCDGIVHLGGISV----------EKPFEQILQGNIIGLYNLYEAAR----AHGQPRIVFASSNHTIGYYPQTERLGPDVP  129 (267)
T ss_dssp             TCSEEEECCSCCS----------CCCHHHHHHHHTHHHHHHHHHHH----HTTCCEEEEEEEGGGGTTSBTTSCBCTTSC
T ss_pred             CCCEEEECCCCcC----------cCCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEcchHHhCCCCCCCCCCCCCC
Confidence            4669999999842          12368899999999999999984    356689999999887731          12


Q ss_pred             CCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       202 ~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      .+....|+.||++.+.+++.++.++   |+++++++||.+.+++.+.
T Consensus       130 ~~~~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~  173 (267)
T 3rft_A          130 ARPDGLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNY  173 (267)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCST
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCC
Confidence            3456789999999999999999886   7899999999998876543

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.91  E-value=2.9e-24  Score=176.11  Aligned_cols=160  Identities=18%  Similarity=0.169  Sum_probs=126.0

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceE-EEEEEECCCCcHHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQI-KSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      .+++||+++||||+|+||++++++|+++|++|++++|++++.++..+        ..+ ..+.+|+++       .+.+.
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~~-------~~~~~   81 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLEE-------DFSHA   81 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTTS-------CCGGG
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccHH-------HHHHH
Confidence            44779999999999999999999999999999999999988765432        135 678888882       34445


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC---CC
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD---PL  204 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~---~~  204 (255)
                      ++  ++|+||||||....          +++++.+++|+.++.++++++.    +++.++||++||..+..  +.   +.
T Consensus        82 ~~--~~D~vi~~ag~~~~----------~~~~~~~~~n~~~~~~l~~a~~----~~~~~~iv~~SS~~~~~--~~~~~~~  143 (236)
T 3e8x_A           82 FA--SIDAVVFAAGSGPH----------TGADKTILIDLWGAIKTIQEAE----KRGIKRFIMVSSVGTVD--PDQGPMN  143 (236)
T ss_dssp             GT--TCSEEEECCCCCTT----------SCHHHHHHTTTHHHHHHHHHHH----HHTCCEEEEECCTTCSC--GGGSCGG
T ss_pred             Hc--CCCEEEECCCCCCC----------CCccccchhhHHHHHHHHHHHH----HcCCCEEEEEecCCCCC--CCCChhh
Confidence            55  46699999997531          2368899999999999999874    34568999999977655  22   35


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ...|+.+|++++.+.+       ..|++++.++||++.+++...
T Consensus       144 ~~~Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~  180 (236)
T 3e8x_A          144 MRHYLVAKRLADDELK-------RSSLDYTIVRPGPLSNEESTG  180 (236)
T ss_dssp             GHHHHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCCCS
T ss_pred             hhhHHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCC
Confidence            7899999999998865       469999999999999987543

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.89  E-value=1.4e-22  Score=174.25  Aligned_cols=176  Identities=18%  Similarity=0.181  Sum_probs=136.6

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEE-EEECCCCcHHHHHHHHHHhc
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSV-VVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~~~~  129 (255)
                      .++++++||||+|+||++++++|+++|++|++++|+.++.+...+.+.+.. ...+..+ .+|++|.     +.+.+.+.
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~-----~~~~~~~~   82 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY-PGRFETAVVEDMLKQ-----GAYDEVIK   82 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS-TTTEEEEECSCTTST-----TTTTTTTT
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC-CCceEEEEecCCcCh-----HHHHHHHc
Confidence            568999999999999999999999999999999999887766655554432 2356666 7899875     22233333


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCC--------
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS--------  201 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~--------  201 (255)
                        ++|++|||||....      .   +++++.+++|+.++.++++++.+.   .+.+++|++||..++..+.        
T Consensus        83 --~~d~vih~A~~~~~------~---~~~~~~~~~n~~g~~~ll~~~~~~---~~~~~iv~~SS~~~~~~~~~~~~~~~~  148 (342)
T 1y1p_A           83 --GAAGVAHIASVVSF------S---NKYDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNVEGIYL  148 (342)
T ss_dssp             --TCSEEEECCCCCSC------C---SCHHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTCCCCEE
T ss_pred             --CCCEEEEeCCCCCC------C---CCHHHHHHHHHHHHHHHHHHHHhC---CCCcEEEEeccHHHhcCCCCCCCCccc
Confidence              46799999997532      1   135678999999999999998752   3457999999987763210        


Q ss_pred             ---------------------CCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          202 ---------------------DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       202 ---------------------~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                                           ..+...|+.||++.+.+++.++.++.. ++++++++||.+.+|+.+
T Consensus       149 ~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~  214 (342)
T 1y1p_A          149 DEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFD  214 (342)
T ss_dssp             CTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSC
T ss_pred             CccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCC
Confidence                                 012468999999999999999999876 899999999999998764

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.89  E-value=9.9e-23  Score=176.33  Aligned_cols=170  Identities=19%  Similarity=0.188  Sum_probs=138.4

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHc-CC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKT-GL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~-G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      +++|+++||||+|+||++++++|+++ |+ +|++++|++.+.++..+++.    ...+..+.+|++|.     +.+.+.+
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~----~~~v~~~~~Dl~d~-----~~l~~~~   89 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN----DPRMRFFIGDVRDL-----ERLNYAL   89 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC----CTTEEEEECCTTCH-----HHHHHHT
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc----CCCEEEEECCCCCH-----HHHHHHH
Confidence            66999999999999999999999999 98 99999999887776655542    34678899999975     4455555


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      .  ++|+||||||....   +.   .....++.+++|+.|+.++++++.+.    +.+++|++||..+..  |   ...|
T Consensus        90 ~--~~D~Vih~Aa~~~~---~~---~~~~~~~~~~~Nv~gt~~l~~aa~~~----~v~~~V~~SS~~~~~--p---~~~Y  152 (344)
T 2gn4_A           90 E--GVDICIHAAALKHV---PI---AEYNPLECIKTNIMGASNVINACLKN----AISQVIALSTDKAAN--P---INLY  152 (344)
T ss_dssp             T--TCSEEEECCCCCCH---HH---HHHSHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEECCGGGSS--C---CSHH
T ss_pred             h--cCCEEEECCCCCCC---Cc---hhcCHHHHHHHHHHHHHHHHHHHHhC----CCCEEEEecCCccCC--C---ccHH
Confidence            5  46699999997642   11   12234678999999999999998773    457899999976654  2   4689


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                      ++||++.+.++++++.++.+.|+++++++||.+.++..
T Consensus       153 ~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~  190 (344)
T 2gn4_A          153 GATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRG  190 (344)
T ss_dssp             HHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTT
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCC
Confidence            99999999999999998888899999999999998753

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.89  E-value=9.7e-23  Score=175.51  Aligned_cols=176  Identities=18%  Similarity=0.129  Sum_probs=134.1

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .+++++||||+|+||++++++|+++|++|++++|+.+..++..+++.+.. +..+..+.+|++|.  +.++++.+.   .
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~--~~~~~~~~~---~   77 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT-GKTPAFHETDVSDE--RALARIFDA---H   77 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHH-SCCCEEECCCTTCH--HHHHHHHHH---S
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhc-CCCceEEEeecCCH--HHHHHHHhc---c
Confidence            36899999999999999999999999999999998877666666665543 34577889999875  333333332   3


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC---------CC
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SD  202 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~---------~~  202 (255)
                      ++|++|||||....  .    ...+..++.+++|+.++.+++++    +++++.++||++||...+..+         +.
T Consensus        78 ~~d~vih~A~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~  147 (341)
T 3enk_A           78 PITAAIHFAALKAV--G----ESVAKPIEYYRNNLDSLLSLLRV----MRERAVKRIVFSSSATVYGVPERSPIDETFPL  147 (341)
T ss_dssp             CCCEEEECCCCCCH--H----HHHHCHHHHHHHHHHHHHHHHHH----HHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCC
T ss_pred             CCcEEEECcccccc--C----ccccChHHHHHHHHHHHHHHHHH----HHhCCCCEEEEEecceEecCCCCCCCCCCCCC
Confidence            57799999998642  1    12233457788999999888776    445566899999997766421         11


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                      .....|+.||++.+.+++.++.++.  |++++.++|+.+-.|.
T Consensus       148 ~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~  188 (341)
T 3enk_A          148 SATNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAH  188 (341)
T ss_dssp             BCSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCC
T ss_pred             CCCChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCc
Confidence            2346899999999999999998863  6999999999998874

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.89  E-value=3.1e-23  Score=170.34  Aligned_cols=158  Identities=14%  Similarity=0.135  Sum_probs=122.5

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      .++|+++||||+||||++++++|+++|+  +|++++|++++.++..        ...+..+.+|++|.     +.+.+.+
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~d~-----~~~~~~~   82 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA--------YKNVNQEVVDFEKL-----DDYASAF   82 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG--------GGGCEEEECCGGGG-----GGGGGGG
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc--------cCCceEEecCcCCH-----HHHHHHh
Confidence            4589999999999999999999999999  9999999876543211        12467788999874     2333344


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      .  ++|++|||||....         .+.+++.+++|+.++..+++++    ++++.++||++||..++.    +....|
T Consensus        83 ~--~~d~vi~~ag~~~~---------~~~~~~~~~~n~~~~~~~~~~~----~~~~~~~iv~~SS~~~~~----~~~~~Y  143 (242)
T 2bka_A           83 Q--GHDVGFCCLGTTRG---------KAGAEGFVRVDRDYVLKSAELA----KAGGCKHFNLLSSKGADK----SSNFLY  143 (242)
T ss_dssp             S--SCSEEEECCCCCHH---------HHHHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCT----TCSSHH
T ss_pred             c--CCCEEEECCCcccc---------cCCcccceeeeHHHHHHHHHHH----HHCCCCEEEEEccCcCCC----CCcchH
Confidence            4  46699999997421         1346788999999998888874    445568999999988765    234689


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCc-eEEEeeeeeeeeCCcc
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGI-DVQCQVLFLLCFYNLN  247 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi-~v~~v~Pg~v~T~~~~  247 (255)
                      +++|++++.+++.+       ++ ++++++||++.||+.+
T Consensus       144 ~~sK~~~e~~~~~~-------~~~~~~~vrpg~v~~~~~~  176 (242)
T 2bka_A          144 LQVKGEVEAKVEEL-------KFDRYSVFRPGVLLCDRQE  176 (242)
T ss_dssp             HHHHHHHHHHHHTT-------CCSEEEEEECCEEECTTGG
T ss_pred             HHHHHHHHHHHHhc-------CCCCeEEEcCceecCCCCC
Confidence            99999999987653       56 7999999999999754

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.89  E-value=3.9e-22  Score=171.94  Aligned_cols=173  Identities=15%  Similarity=0.061  Sum_probs=131.7

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh-hhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      ++++||||+|+||++++++|+++|++|++++|+. ...++..+++..   ..++..+.+|++|.  +.++++.+.   .+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~---~~~~~~~~~Dl~d~--~~~~~~~~~---~~   73 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNK--NDVTRLITK---YM   73 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCH--HHHHHHHHH---HC
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc---CCceEEEEcCCCCH--HHHHHHHhc---cC
Confidence            5799999999999999999999999999999863 333333444433   23467788999874  333333332   24


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC------------
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP------------  200 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~------------  200 (255)
                      +|+||||||....      +.+.+++++.+++|+.++.++++++.+.+.   ++++|++||.+.+...            
T Consensus        74 ~d~vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~---~~~iv~~SS~~v~g~~~~~~~~e~~~~~  144 (347)
T 1orr_A           74 PDSCFHLAGQVAM------TTSIDNPCMDFEINVGGTLNLLEAVRQYNS---NCNIIYSSTNKVYGDLEQYKYNETETRY  144 (347)
T ss_dssp             CSEEEECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEEGGGGTTCTTSCEEECSSCE
T ss_pred             CCEEEECCcccCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC---CceEEEeccHHHhCCCCcCCcccccccc
Confidence            6799999997532      223456788999999999999999988653   3689999997654310            


Q ss_pred             -------------CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          201 -------------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       201 -------------~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                                   +.+....|+.||++.+.+++.++.++   |+++++++||.+.+|..
T Consensus       145 ~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~  200 (347)
T 1orr_A          145 TCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQ  200 (347)
T ss_dssp             EETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTC
T ss_pred             cccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCC
Confidence                         12346789999999999999999886   89999999999999875

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.88  E-value=7e-23  Score=212.47  Aligned_cols=176  Identities=13%  Similarity=0.087  Sum_probs=132.7

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCc-EEEEeCChhhH---HHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPDKL---KDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK  125 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~-V~l~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~  125 (255)
                      .+|+++||||++|||+++|++|+++|++ |++++|+..+.   ++..+++.+.  +.++..+.||++|.  +++.++++.
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~~ 1960 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ--GVQVLVSTSNASSLDGARSLITEAT 1960 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT--TCEEEEECCCSSSHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC--CCEEEEEecCCCCHHHHHHHHHHHH
Confidence            5899999999999999999999999997 88899986544   3444555443  45788899999983  455555554


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCc
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~  205 (255)
                       .++  ++|+||||||+...  .++.+++.++|++++++|+.|++++.+.+.|.|.+.  |+||++||.++..  +.++.
T Consensus      1961 -~~g--~id~lVnnAgv~~~--~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~--g~iV~iSS~ag~~--g~~g~ 2031 (2512)
T 2vz8_A         1961 -QLG--PVGGVFNLAMVLRD--AVLENQTPEFFQDVSKPKYSGTANLDRVTREACPEL--DYFVIFSSVSCGR--GNAGQ 2031 (2512)
T ss_dssp             -HHS--CEEEEEECCCC------------------CTTTTHHHHHHHHHHHHHHCTTC--CEEEEECCHHHHT--TCTTC
T ss_pred             -hcC--CCcEEEECCCcCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC--CEEEEecchhhcC--CCCCc
Confidence             344  57799999998754  568899999999999999999999999999987543  8999999999988  77889


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeee
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLC  242 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~  242 (255)
                      ..|++||+|+++|++.++.+    |+...++.+|.+.
T Consensus      2032 ~~Y~aaKaal~~l~~~rr~~----Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2032 ANYGFANSAMERICEKRRHD----GLPGLAVQWGAIG 2064 (2512)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT----TSCCCEEEECCBC
T ss_pred             HHHHHHHHHHHHHHHHHHHC----CCcEEEEEccCcC
Confidence            99999999999999988876    7777788877654

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.88  E-value=1.4e-22  Score=175.76  Aligned_cols=179  Identities=15%  Similarity=0.072  Sum_probs=135.9

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      +++++++||||+|+||++++++|+++|++|++++|+.++.++..+.+.   ....+..+.+|++|.  +.++++.+..  
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~--~~~~~~~~~~--   79 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR---VADGMQSEIGDIRDQ--NKLLESIREF--   79 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT---TTTTSEEEECCTTCH--HHHHHHHHHH--
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc---cCCceEEEEccccCH--HHHHHHHHhc--
Confidence            458999999999999999999999999999999998765544433332   123567889999875  3333333322  


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC----------
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP----------  200 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~----------  200 (255)
                       ++|+||||||...      .+.+.+++++.+++|+.++.++++++.+.   .+.+++|++||...+...          
T Consensus        80 -~~d~vih~A~~~~------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~E~~  149 (357)
T 1rkx_A           80 -QPEIVFHMAAQPL------VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENE  149 (357)
T ss_dssp             -CCSEEEECCSCCC------HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTS
T ss_pred             -CCCEEEECCCCcc------cccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHHhCCCCcCCCCCCCC
Confidence             4679999999632      12244567889999999999999998762   235799999998754311          


Q ss_pred             CCCCchhchHHHHHHHHHHHHHHHHHc------cCCceEEEeeeeeeeeCCc
Q 025260          201 SDPLYSVYAATKAYIDQFSRSLYVEYR------KSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       201 ~~~~~~~Y~asK~al~~~~~~l~~e~~------~~gi~v~~v~Pg~v~T~~~  246 (255)
                      +......|+.||++.+.+++.++.++.      +.|++++.++||.+.+|..
T Consensus       150 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~  201 (357)
T 1rkx_A          150 AMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGD  201 (357)
T ss_dssp             CBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTC
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCC
Confidence            123457899999999999999999884      4589999999999998754

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.88  E-value=2.6e-22  Score=171.44  Aligned_cols=168  Identities=21%  Similarity=0.210  Sum_probs=129.5

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .+.++++||||+|+||++++++|+++|++|++++|+.+. +.    +       .+..+.+|++|.  +.++++.+.   
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-------~~~~~~~Dl~d~--~~~~~~~~~---   72 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-------NVEMISLDIMDS--QRVKKVISD---   72 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-------TEEEEECCTTCH--HHHHHHHHH---
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-------eeeEEECCCCCH--HHHHHHHHh---
Confidence            446899999999999999999999999999999998764 21    1       467788999874  333333332   


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC----------
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP----------  200 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~----------  200 (255)
                      .++|++|||||....      +.+.+++++.+++|+.++.++++++ +.+  ++.+++|++||...+...          
T Consensus        73 ~~~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~--~~~~~iv~~SS~~v~g~~~~~~~~~~E~  143 (321)
T 2pk3_A           73 IKPDYIFHLAAKSSV------KDSWLNKKGTFSTNVFGTLHVLDAV-RDS--NLDCRILTIGSSEEYGMILPEESPVSEE  143 (321)
T ss_dssp             HCCSEEEECCSCCCH------HHHTTCHHHHHHHHHHHHHHHHHHH-HHH--TCCCEEEEEEEGGGTBSCCGGGCSBCTT
T ss_pred             cCCCEEEEcCcccch------hhhhhcHHHHHHHHHHHHHHHHHHH-HHh--CCCCeEEEEccHHhcCCCCCCCCCCCCC
Confidence            246799999997532      1122346889999999999999998 544  246899999998765421          


Q ss_pred             -CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          201 -SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       201 -~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                       +.+....|+.||++.+.+++.++.|+   |++++.++||.+.+|...
T Consensus       144 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~  188 (321)
T 2pk3_A          144 NQLRPMSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQS  188 (321)
T ss_dssp             SCCBCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCC
T ss_pred             CCCCCCCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCC
Confidence             12346789999999999999999885   899999999999998764

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.88  E-value=6.4e-23  Score=176.60  Aligned_cols=178  Identities=16%  Similarity=0.109  Sum_probs=128.9

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      ++|+++||||+|+||++++++|+++|++|++++|+.+..+.  +.+.+......+..+.+|++|.  +.++++.+..   
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~--~~~~~~~~~~---   74 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEF--SNIIRTIEKV---   74 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCH--HHHHHHHHHH---
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccccCceeEEECCCCCH--HHHHHHHHhc---
Confidence            47899999999999999999999999999999998765432  1222222234577888999874  3333333322   


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc---------CCC
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI---------PSD  202 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~---------~~~  202 (255)
                      ++|++|||||....      +.+.+++++.+++|+.++.++++++.+ +  ...+++|++||...+..         .+.
T Consensus        75 ~~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~-~--~~~~~iv~~SS~~vyg~~~~~~~~e~~~~  145 (345)
T 2z1m_A           75 QPDEVYNLAAQSFV------GVSFEQPILTAEVDAIGVLRILEALRT-V--KPDTKFYQASTSEMFGKVQEIPQTEKTPF  145 (345)
T ss_dssp             CCSEEEECCCCCCH------HHHTTSHHHHHHHHTHHHHHHHHHHHH-H--CTTCEEEEEEEGGGGCSCSSSSBCTTSCC
T ss_pred             CCCEEEECCCCcch------hhhhhCHHHHHHHHHHHHHHHHHHHHH-h--CCCceEEEEechhhcCCCCCCCCCccCCC
Confidence            56799999997532      122345788899999999999999875 2  11479999999865431         123


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHc---cCCceEEEeeeeeeeeCC
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYR---KSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~---~~gi~v~~v~Pg~v~T~~  245 (255)
                      ++...|+.||++.+.+++.++.++.   ..++.++.+.||...|++
T Consensus       146 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~  191 (345)
T 2z1m_A          146 YPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFV  191 (345)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSH
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcch
Confidence            4467899999999999999999874   234556677788777665

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.87  E-value=1.9e-21  Score=157.73  Aligned_cols=143  Identities=12%  Similarity=0.195  Sum_probs=114.1

Q ss_pred             cEEEEECCCCchHHHHHHHHH-HcCCcEEEEeCChh-hHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           54 SWALVTGPTDGIGKSFAFQLA-KTGLNLVLVGRNPD-KLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la-~~G~~V~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      |+++||||+||||++++++|+ ++|++|++++|+++ ++++..    +.  ...+..+.+|++|.     +.+.+.+.  
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~~D~~d~-----~~~~~~~~--   72 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----ID--HERVTVIEGSFQNP-----GXLEQAVT--   72 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HT--STTEEEEECCTTCH-----HHHHHHHT--
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cC--CCceEEEECCCCCH-----HHHHHHHc--
Confidence            679999999999999999999 89999999999987 555432    11  34678899999975     34455555  


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch-----
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS-----  206 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~-----  206 (255)
                      ++|++|||||..                     |+.     ++.+++.|++++.++||++||..++.  +.+...     
T Consensus        73 ~~d~vv~~ag~~---------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~--~~~~~~~~~~~  124 (221)
T 3r6d_A           73 NAEVVFVGAMES---------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSG--EFPVALEKWTF  124 (221)
T ss_dssp             TCSEEEESCCCC---------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTS--CSCHHHHHHHH
T ss_pred             CCCEEEEcCCCC---------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecC--CCCcccccccc
Confidence            456999999852                     222     78888889888888999999988876  334433     


Q ss_pred             -----hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          207 -----VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       207 -----~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                           .|+.+|.+++.+.+       ..|++++.|+||++.++
T Consensus       125 ~~~~~~y~~~K~~~e~~~~-------~~~i~~~~vrpg~v~~~  160 (221)
T 3r6d_A          125 DNLPISYVQGERQARNVLR-------ESNLNYTILRLTWLYND  160 (221)
T ss_dssp             HTSCHHHHHHHHHHHHHHH-------HSCSEEEEEEECEEECC
T ss_pred             cccccHHHHHHHHHHHHHH-------hCCCCEEEEechhhcCC
Confidence                 89999999988664       36999999999999988

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.87  E-value=3.1e-21  Score=166.51  Aligned_cols=174  Identities=16%  Similarity=0.155  Sum_probs=129.1

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhh------HHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHH
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK------LKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKE  126 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~------~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  126 (255)
                      +|+++||||+|+||.+++++|+++|++|++++|+...      ..+..+++.+.. +..+..+.+|++|.  +.++++.+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~--~~~~~~~~   78 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT-GRSVEFEEMDILDQ--GALQRLFK   78 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH-TCCCEEEECCTTCH--HHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc-CCceEEEECCCCCH--HHHHHHHH
Confidence            5789999999999999999999999999999986433      223333343321 23567888999874  33333333


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc-------
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI-------  199 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~-------  199 (255)
                      .   .++|++|||||.....      .+.+++++.+++|+.++.++++++.    +.+.+++|++||...+..       
T Consensus        79 ~---~~~d~vih~A~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~iv~~SS~~~~g~~~~~~~~  145 (348)
T 1ek6_A           79 K---YSFMAVIHFAGLKAVG------ESVQKPLDYYRVNLTGTIQLLEIMK----AHGVKNLVFSSSATVYGNPQYLPLD  145 (348)
T ss_dssp             H---CCEEEEEECCSCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGGGCSCSSSSBC
T ss_pred             h---cCCCEEEECCCCcCcc------chhhchHHHHHHHHHHHHHHHHHHH----HhCCCEEEEECcHHHhCCCCCCCcC
Confidence            2   3678999999975321      1334567899999999999998753    445679999999876542       


Q ss_pred             ---CCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          200 ---PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       200 ---~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                         +..|....|+.||++.+.+++.++.+  ..++++..++|+.+-.|
T Consensus       146 E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~  191 (348)
T 1ek6_A          146 EAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGA  191 (348)
T ss_dssp             TTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECC
T ss_pred             CCCCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCC
Confidence               11233678999999999999999988  34699999999998876

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.87  E-value=6.2e-22  Score=171.76  Aligned_cols=175  Identities=16%  Similarity=0.077  Sum_probs=130.5

Q ss_pred             EEEEECCCCchHHHHHHHHHHc-CCcEEEEeCChh--hHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           55 WALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPD--KLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~-G~~V~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .++||||+|+||++++++|+++ |++|++++|+..  ..+.. +++.   ....+..+.+|++|.  +.++++.+.   .
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~---~~~~~~~~~~Dl~d~--~~~~~~~~~---~   72 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS---ESNRYNFEHADICDS--AEITRIFEQ---Y   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT---TCTTEEEEECCTTCH--HHHHHHHHH---H
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh---cCCCeEEEECCCCCH--HHHHHHHhh---c
Confidence            4899999999999999999998 799999998752  22111 1111   134578889999975  333333322   2


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-----CcEEEEECCccccccC------
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-----KGAIVNIGSGAAIVIP------  200 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-----~g~iv~vsS~~~~~~~------  200 (255)
                      ++|+||||||....      +.+.+++++.+++|+.++.++++++.+.|..-+     +++||++||...+...      
T Consensus        73 ~~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~  146 (361)
T 1kew_A           73 QPDAVMHLAAESHV------DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEV  146 (361)
T ss_dssp             CCSEEEECCSCCCH------HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGS
T ss_pred             CCCEEEECCCCcCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccc
Confidence            56799999997531      223455778999999999999999999864322     3599999997644311      


Q ss_pred             -------------CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          201 -------------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       201 -------------~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                                   +.+....|+.||++.+.+++.++.++   |++++.++||.+.+|...
T Consensus       147 ~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~  203 (361)
T 1kew_A          147 ENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHF  203 (361)
T ss_dssp             CTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCC
T ss_pred             cccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCC
Confidence                         12346789999999999999999887   799999999999998753

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.86  E-value=1.1e-20  Score=166.16  Aligned_cols=181  Identities=17%  Similarity=0.090  Sum_probs=130.8

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHH----------------HHHHHHHhhcCCceEEEEEEEC
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK----------------DVSDSIQAKYAKTQIKSVVVDF  113 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~----------------~~~~~~~~~~~~~~~~~~~~d~  113 (255)
                      ..++..||||||+|.||++++++|+++|++|++++|+.....                +..++..+.. ...+..+.+|+
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~v~~~~~Dl   86 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVGDI   86 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEESCT
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhcc-CCceEEEECCC
Confidence            356899999999999999999999999999999998754321                1122221111 23567888999


Q ss_pred             CCCcHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCC-cEEEEEC
Q 025260          114 SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK-GAIVNIG  192 (255)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~-g~iv~vs  192 (255)
                      +|.  +.++++.+..   ++|+||||||....  . ....+.+.++..+++|+.|+.++++++.+.    +. .++|++|
T Consensus        87 ~d~--~~~~~~~~~~---~~D~Vih~A~~~~~--~-~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~~~~V~~S  154 (404)
T 1i24_A           87 CDF--EFLAESFKSF---EPDSVVHFGEQRSA--P-YSMIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHLVKLG  154 (404)
T ss_dssp             TSH--HHHHHHHHHH---CCSEEEECCSCCCH--H-HHTSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEEC
T ss_pred             CCH--HHHHHHHhcc---CCCEEEECCCCCCc--c-chhhCccchhhhHHHHHHHHHHHHHHHHHh----CCCcEEEEeC
Confidence            874  3333333322   46799999997532  1 122356667889999999999999998653    33 4899999


Q ss_pred             CccccccC----------------------CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          193 SGAAIVIP----------------------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       193 S~~~~~~~----------------------~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                      |.+.+...                      +......|+.||++.+.+++.++.++   |+++++++||.+.+|..
T Consensus       155 S~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~~  227 (404)
T 1i24_A          155 TMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKT  227 (404)
T ss_dssp             CGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCC
T ss_pred             cHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCCC
Confidence            98655311                      22335689999999999999998887   89999999999999864

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.86  E-value=3.5e-21  Score=166.66  Aligned_cols=178  Identities=15%  Similarity=0.063  Sum_probs=133.9

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcC---CceEEEEEEECCCCcHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYA---KTQIKSVVVDFSGDLDEGVERIKE  126 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~  126 (255)
                      +.++++++||||+|+||++++++|+++|++|++++|+.....+..+++.+...   ...+..+.+|++|.     +.+.+
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-----~~~~~   98 (352)
T 1sb8_A           24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNL-----DDCNN   98 (352)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSH-----HHHHH
T ss_pred             CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCH-----HHHHH
Confidence            35589999999999999999999999999999999976432222222221110   13577889999875     33444


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC----
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD----  202 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~----  202 (255)
                      .+.  ++|++|||||....      ..+.+++++.+++|+.++.++++++.+    .+.+++|++||...+...+.    
T Consensus        99 ~~~--~~d~vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~  166 (352)
T 1sb8_A           99 ACA--GVDYVLHQAALGSV------PRSINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAASSSTYGDHPGLPKV  166 (352)
T ss_dssp             HHT--TCSEEEECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSSBC
T ss_pred             Hhc--CCCEEEECCcccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHhcCCCCCCCCC
Confidence            444  46699999997532      113455788999999999999999765    35579999999877652111    


Q ss_pred             -----CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          203 -----PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       203 -----~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                           .....|+.||++.+.+++.++.++   |++++.++||.+.+|...
T Consensus       167 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~  213 (352)
T 1sb8_A          167 EDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQD  213 (352)
T ss_dssp             TTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCC
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCC
Confidence                 135789999999999999999886   899999999999998753

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.86  E-value=7.2e-21  Score=167.13  Aligned_cols=176  Identities=20%  Similarity=0.170  Sum_probs=130.8

Q ss_pred             CcEEEEECCCCchHHHHHHHHH-HcCCcEEEEeCChhh---------HHHHHHHHHhhcC---Cce---EEEEEEECCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLA-KTGLNLVLVGRNPDK---------LKDVSDSIQAKYA---KTQ---IKSVVVDFSGD  116 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la-~~G~~V~l~~r~~~~---------~~~~~~~~~~~~~---~~~---~~~~~~d~~~~  116 (255)
                      ++++|||||+|+||.+++++|+ ++|++|++++|+...         .+...+.+.+...   ...   +..+.+|++|.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4689999999999999999999 999999999998654         3333333333221   113   77889999875


Q ss_pred             cHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccc
Q 025260          117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA  196 (255)
Q Consensus       117 ~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~  196 (255)
                        +.++++.+.++  ++|+||||||.....      .+.+++++.+++|+.++.++++++.    +.+.++||++||...
T Consensus        82 --~~~~~~~~~~~--~~d~vih~A~~~~~~------~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~~~~iv~~SS~~v  147 (397)
T 1gy8_A           82 --DFLNGVFTRHG--PIDAVVHMCAFLAVG------ESVRDPLKYYDNNVVGILRLLQAML----LHKCDKIIFSSSAAI  147 (397)
T ss_dssp             --HHHHHHHHHSC--CCCEEEECCCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGG
T ss_pred             --HHHHHHHHhcC--CCCEEEECCCccCcC------cchhhHHHHHHHHhHHHHHHHHHHH----HhCCCEEEEECCHHH
Confidence              33444433333  367999999976321      1345578899999999999999854    345679999999765


Q ss_pred             cccCC----------------CCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          197 IVIPS----------------DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       197 ~~~~~----------------~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                      +..+.                ......|+.||++.+.+++.++.++   |+++++++|+.+-.|.
T Consensus       148 ~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          148 FGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH  209 (397)
T ss_dssp             TBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred             hCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCC
Confidence            54211                0125789999999999999999987   8999999999998764

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.86  E-value=1.8e-21  Score=167.27  Aligned_cols=171  Identities=16%  Similarity=0.080  Sum_probs=129.2

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcC--CcEEEEeCChh--hHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPD--KLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G--~~V~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      +++++||||+|+||++++++|+++|  ++|++++|+..  ..+.. +++.   ....+..+.+|++|.     +.+.+.+
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~---~~~~~~~~~~Dl~d~-----~~~~~~~   73 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE---DDPRYTFVKGDVADY-----ELVKELV   73 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT---TCTTEEEEECCTTCH-----HHHHHHH
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc---cCCceEEEEcCCCCH-----HHHHHHh
Confidence            5679999999999999999999997  89999998642  11111 1111   134578889999975     2333444


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC--------
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP--------  200 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~--------  200 (255)
                      +  ++|++|||||....      +.+.+++++.+++|+.++.++++++.+.   ...+++|++||...+...        
T Consensus        74 ~--~~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~E~  142 (336)
T 2hun_A           74 R--KVDGVVHLAAESHV------DRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDEVYGDILKGSFTEN  142 (336)
T ss_dssp             H--TCSEEEECCCCCCH------HHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCCCSSSCBCTT
T ss_pred             h--CCCEEEECCCCcCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHHHHCCCCCCCcCCC
Confidence            4  46699999997531      2234456788999999999999999875   224799999997654321        


Q ss_pred             -CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          201 -SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       201 -~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                       +.+....|+.||++.+.+++.++.++   |++++.++||.+.+|..
T Consensus       143 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~  186 (336)
T 2hun_A          143 DRLMPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQ  186 (336)
T ss_dssp             BCCCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTC
T ss_pred             CCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCC
Confidence             23346789999999999999999885   89999999999999875

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.85  E-value=5.3e-21  Score=157.50  Aligned_cols=166  Identities=16%  Similarity=0.015  Sum_probs=121.3

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHc--CCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKT--GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~--G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      ++++++||||+|+||++++++|+++  |++|++++|++++.++.         ...+..+.+|++|.     +.+.+.+.
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~D~~d~-----~~~~~~~~   68 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI---------GGEADVFIGDITDA-----DSINPAFQ   68 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT---------TCCTTEEECCTTSH-----HHHHHHHT
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc---------CCCeeEEEecCCCH-----HHHHHHHc
Confidence            4789999999999999999999999  89999999997665432         22345778899875     34444455


Q ss_pred             CCCccEEEEecCCCCCccc-------ccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC
Q 025260          130 GLDVGVLINNVGISYPYAR-------FFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD  202 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~-------~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~  202 (255)
                      +  +|++|||||.......       ...+.+.+.+++.+++|+.++..+++++..    ++.++||++||..+..  +.
T Consensus        69 ~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~~--~~  140 (253)
T 1xq6_A           69 G--IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV----AGVKHIVVVGSMGGTN--PD  140 (253)
T ss_dssp             T--CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHH----HTCSEEEEEEETTTTC--TT
T ss_pred             C--CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHH----cCCCEEEEEcCccCCC--CC
Confidence            3  5699999997642110       001222234456789999999988888654    3457999999988754  33


Q ss_pred             CCchh-----chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          203 PLYSV-----YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       203 ~~~~~-----Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                      +....     |..+|++++.+.+.       .|+++++++||.+.++..
T Consensus       141 ~~~~~~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~  182 (253)
T 1xq6_A          141 HPLNKLGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEG  182 (253)
T ss_dssp             CGGGGGGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCS
T ss_pred             CccccccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCc
Confidence            33333     55699999887652       689999999999999864

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.85  E-value=2e-20  Score=160.94  Aligned_cols=175  Identities=19%  Similarity=0.198  Sum_probs=124.6

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcC-CceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYA-KTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      ++|++|||||+|+||++++++|+++|++|+++.|+.+..++.. .+.+... ...+..+.+|++|.     +.+.+.+.+
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~-----~~~~~~~~~   77 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVK-HLLDLPKAETHLTLWKADLADE-----GSFDEAIKG   77 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHH-HHHTSTTHHHHEEEEECCTTST-----TTTHHHHTT
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHH-HHHhcccCCCeEEEEEcCCCCH-----HHHHHHHcC
Confidence            5799999999999999999999999999999999876543322 1111100 12477888999875     223333443


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC--------
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD--------  202 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~--------  202 (255)
                        +|++||+|+...     ....+.  .++.+++|+.|+.++++++.+..   +.++||++||.++....+.        
T Consensus        78 --~d~Vih~A~~~~-----~~~~~~--~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~~~~~~~~~~~~~E~  145 (337)
T 2c29_D           78 --CTGVFHVATPMD-----FESKDP--ENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGTVNIQEHQLPVYDES  145 (337)
T ss_dssp             --CSEEEECCCCCC-----SSCSSH--HHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGGTSCSSSCCSEECTT
T ss_pred             --CCEEEEeccccC-----CCCCCh--HHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhhcccCCCCCcccCcc
Confidence              569999998641     112222  35689999999999999987642   2478999999875431100        


Q ss_pred             ------------CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          203 ------------PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       203 ------------~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                                  +...+|+.||.+.+.+++.++.+.   |+++++++|+.+.+|...
T Consensus       146 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~~lrp~~v~Gp~~~  199 (337)
T 2c29_D          146 CWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKEN---NIDFITIIPTLVVGPFIM  199 (337)
T ss_dssp             CCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHH---TCCEEEEEECEEESCCSC
T ss_pred             cCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCC
Confidence                        123469999999999887776553   899999999999998743

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.85  E-value=4.2e-21  Score=155.49  Aligned_cols=150  Identities=19%  Similarity=0.267  Sum_probs=121.5

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC-CcHHHHHHHHHHhcCCCc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG-DLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~~i  133 (255)
                      +++||||+|+||++++++|+++|++|++++|+.++.++.          ..+..+.+|++| .     +.+.+.+.+  +
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----------~~~~~~~~D~~d~~-----~~~~~~~~~--~   64 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY----------NNVKAVHFDVDWTP-----EEMAKQLHG--M   64 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC----------TTEEEEECCTTSCH-----HHHHTTTTT--C
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc----------CCceEEEecccCCH-----HHHHHHHcC--C
Confidence            589999999999999999999999999999998764321          457889999998 4     455555554  6


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC-------ch
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL-------YS  206 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~-------~~  206 (255)
                      |++|||||....              +.+++|+.++..+++++    ++++.+++|++||..+..  +.+.       ..
T Consensus        65 d~vi~~ag~~~~--------------~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~~~~--~~~~~e~~~~~~~  124 (219)
T 3dqp_A           65 DAIINVSGSGGK--------------SLLKVDLYGAVKLMQAA----EKAEVKRFILLSTIFSLQ--PEKWIGAGFDALK  124 (219)
T ss_dssp             SEEEECCCCTTS--------------SCCCCCCHHHHHHHHHH----HHTTCCEEEEECCTTTTC--GGGCCSHHHHHTH
T ss_pred             CEEEECCcCCCC--------------CcEeEeHHHHHHHHHHH----HHhCCCEEEEECcccccC--CCccccccccccc
Confidence            699999997631              26889999999988886    345567999999988776  3344       67


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      .|+.+|++.+.+.+      ...|++++.++||++.++...
T Consensus       125 ~Y~~sK~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~  159 (219)
T 3dqp_A          125 DYYIAKHFADLYLT------KETNLDYTIIQPGALTEEEAT  159 (219)
T ss_dssp             HHHHHHHHHHHHHH------HSCCCEEEEEEECSEECSCCC
T ss_pred             HHHHHHHHHHHHHH------hccCCcEEEEeCceEecCCCC
Confidence            99999999998876      356999999999999987654

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.85  E-value=1.2e-20  Score=164.27  Aligned_cols=178  Identities=20%  Similarity=0.135  Sum_probs=123.1

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHH-HHHHHHHhhc--CCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK-DVSDSIQAKY--AKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~-~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      +|+++||||+|+||++++++|+++|++|++++|+.+... +..+++.+..  ....+..+.+|++|.  +.++++.+.. 
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~~~~~~~~~-   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDT--SNLTRILREV-   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCH--HHHHHHHHHH-
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCH--HHHHHHHHhc-
Confidence            478999999999999999999999999999999865421 1112221110  123577888999874  3333333322 


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC---------
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------  200 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~---------  200 (255)
                        ++|++|||||....      +.+.+++++.+++|+.++.++++++.+.+.+ +.+++|++||.+.+...         
T Consensus        78 --~~d~vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v~g~~~~~~~~E~~  148 (372)
T 1db3_A           78 --QPDEVYNLGAMSHV------AVSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELYGLVQEIPQKETT  148 (372)
T ss_dssp             --CCSEEEECCCCCTT------TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGGTTCCSSSBCTTS
T ss_pred             --CCCEEEECCcccCc------cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhhhCCCCCCCCCccC
Confidence              56799999997532      1233446788999999999999999876543 34799999998765421         


Q ss_pred             CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          201 SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       201 ~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                      +......|+.||++.+.+++.++.++   |+.+..+.|+.+..|.
T Consensus       149 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~gp~  190 (372)
T 1db3_A          149 PFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPR  190 (372)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTT
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccCCC
Confidence            11235789999999999999999886   6777778877665543

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.85  E-value=5.9e-21  Score=163.97  Aligned_cols=165  Identities=14%  Similarity=0.158  Sum_probs=118.3

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      ...+++++++||||+|+||++++++|+++|++|++++|+.....+..+++      ..+..+.+|++|.  +.++++.+.
T Consensus        15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l------~~v~~~~~Dl~d~--~~~~~~~~~   86 (330)
T 2pzm_A           15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV------AGLSVIEGSVTDA--GLLERAFDS   86 (330)
T ss_dssp             CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC------TTEEEEECCTTCH--HHHHHHHHH
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc------CCceEEEeeCCCH--HHHHHHHhh
Confidence            33467999999999999999999999999999999999765432111111      3577889999874  333333332


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC---C-
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD---P-  203 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~---~-  203 (255)
                      .   ++|+||||||....      . +.++++  +++|+.++.++++++..    ++.++||++||...+.....   + 
T Consensus        87 ~---~~D~vih~A~~~~~------~-~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~~  150 (330)
T 2pzm_A           87 F---KPTHVVHSAAAYKD------P-DDWAED--AATNVQGSINVAKAASK----AGVKRLLNFQTALCYGRPATVPIPI  150 (330)
T ss_dssp             H---CCSEEEECCCCCSC------T-TCHHHH--HHHHTHHHHHHHHHHHH----HTCSEEEEEEEGGGGCSCSSSSBCT
T ss_pred             c---CCCEEEECCccCCC------c-cccChh--HHHHHHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCccCCCCc
Confidence            2   46699999997532      1 344555  99999999999999864    34679999999877652211   2 


Q ss_pred             -----CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeee
Q 025260          204 -----LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCF  243 (255)
Q Consensus       204 -----~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T  243 (255)
                           ....|+.||++.+.+++.+       ++....++|+.+-.
T Consensus       151 ~E~~~~~~~Y~~sK~~~e~~~~~~-------~~~~~~iR~~~v~g  188 (330)
T 2pzm_A          151 DSPTAPFTSYGISKTAGEAFLMMS-------DVPVVSLRLANVTG  188 (330)
T ss_dssp             TCCCCCCSHHHHHHHHHHHHHHTC-------SSCEEEEEECEEEC
T ss_pred             CCCCCCCChHHHHHHHHHHHHHHc-------CCCEEEEeeeeeEC
Confidence                 5678999999999998877       34444455444443

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.84  E-value=5.3e-21  Score=162.63  Aligned_cols=164  Identities=17%  Similarity=0.097  Sum_probs=127.9

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      ++++||||+|+||++++++|+++|++|++++|+.+...+..        ...+..+.+|+.|.     + +.+.+..   
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~Dl~d~-----~-~~~~~~~---   63 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV--------NPSAELHVRDLKDY-----S-WGAGIKG---   63 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS--------CTTSEEECCCTTST-----T-TTTTCCC---
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc--------CCCceEEECccccH-----H-HHhhcCC---
Confidence            46999999999999999999999999999999876533211        33467788999876     2 3333343   


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC---------CCCC
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDPL  204 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~---------~~~~  204 (255)
                      |++||+||....      +.+.++++..+++|+.++.++++++..    .+.+++|++||...+...         +..+
T Consensus        64 d~vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p  133 (312)
T 3ko8_A           64 DVVFHFAANPEV------RLSTTEPIVHFNENVVATFNVLEWARQ----TGVRTVVFASSSTVYGDADVIPTPEEEPYKP  133 (312)
T ss_dssp             SEEEECCSSCSS------SGGGSCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCSCSSSSBCTTSCCCC
T ss_pred             CEEEECCCCCCc------hhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeCcHHHhCCCCCCCCCCCCCCCC
Confidence            699999996422      234445678899999999999998743    345699999998766421         1234


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      ...|+.||++.+.+++.++.++   |++++.++||.+.+|...
T Consensus       134 ~~~Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~  173 (312)
T 3ko8_A          134 ISVYGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLR  173 (312)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCC
T ss_pred             CChHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCC
Confidence            6789999999999999999987   899999999999998744

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.84  E-value=1e-20  Score=162.93  Aligned_cols=193  Identities=10%  Similarity=-0.059  Sum_probs=144.5

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHH-HcCCcEEEEeCChhh------------HHHHHHHHHhhcCCceEEEEEEECCCC
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLA-KTGLNLVLVGRNPDK------------LKDVSDSIQAKYAKTQIKSVVVDFSGD  116 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la-~~G~~V~l~~r~~~~------------~~~~~~~~~~~~~~~~~~~~~~d~~~~  116 (255)
                      ...+|+|||||||+|||++.+..|+ +.|+.++++.+..+.            .....+++++.  +.+...+.||++++
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~--G~~a~~i~~Dv~d~  124 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKRE--GLYSVTIDGDAFSD  124 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHH--TCCEEEEESCTTSH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHc--CCCceeEeCCCCCH
Confidence            3557999999999999999999999 789999999876532            23444556655  45678899999984


Q ss_pred             --cHHHHHHHHHHhcCCCccEEEEecCCCCCcc-----------cc---------------------cccCCHHHHH---
Q 025260          117 --LDEGVERIKEAIEGLDVGVLINNVGISYPYA-----------RF---------------------FHEVDQVLLK---  159 (255)
Q Consensus       117 --~~~~~~~~~~~~~~~~id~lv~nag~~~~~~-----------~~---------------------~~~~~~~~~~---  159 (255)
                        +++.++++++.+++  +|+||||+|......           +|                     +...+.++++   
T Consensus       125 e~i~~vi~~i~~~~G~--IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~  202 (401)
T 4ggo_A          125 EIKAQVIEEAKKKGIK--FDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATV  202 (401)
T ss_dssp             HHHHHHHHHHHHTTCC--EEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCC--CCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHH
Confidence              57788888888775  669999999753100           00                     0112444444   


Q ss_pred             hHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeee
Q 025260          160 NLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLF  239 (255)
Q Consensus       160 ~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg  239 (255)
                      ..|....++.+...+...+.|  .++++++.+|+..+....|....+.++++|++|+..++.|+.|++  +++++++.|+
T Consensus       203 ~vMg~s~~s~w~~al~~a~ll--a~G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~--~~~a~v~v~~  278 (401)
T 4ggo_A          203 KVMGGEDWERWIKQLSKEGLL--EEGCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENP--SIRAFVSVNK  278 (401)
T ss_dssp             HHHSSHHHHHHHHHHHHTTCE--EEEEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCT--TEEEEEEECC
T ss_pred             HHHhhhHHHHHHHHHHhhhcc--cCCceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcC--CCcEEEEEcC
Confidence            555666777777788888877  346899999998876632323345789999999999999999997  5899999999


Q ss_pred             eeeeCCcchhh
Q 025260          240 LLCFYNLNDLV  250 (255)
Q Consensus       240 ~v~T~~~~~~~  250 (255)
                      .+.|+....+.
T Consensus       279 a~vT~AssaIP  289 (401)
T 4ggo_A          279 GLVTRASAVIP  289 (401)
T ss_dssp             CCCCTTGGGSS
T ss_pred             ccccchhhcCC
Confidence            99998776654

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.84  E-value=2.4e-20  Score=161.23  Aligned_cols=178  Identities=13%  Similarity=0.055  Sum_probs=137.0

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCC---ceEEEEEEECCCCcHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAK---TQIKSVVVDFSGDLDEGVERIKE  126 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~  126 (255)
                      ..++++|+||||+|+||++++++|+++|++|++++|+.....+..+++.+..+.   ..+..+.+|++|.     +.+.+
T Consensus        22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-----~~~~~   96 (351)
T 3ruf_A           22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDL-----TTCEQ   96 (351)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCH-----HHHHH
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCH-----HHHHH
Confidence            356899999999999999999999999999999999876555555555432211   4688899999875     34555


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC----
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD----  202 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~----  202 (255)
                      .+.  ++|++||+||....      ..+.++.+..+++|+.++.++++++..    .+.+++|++||...+...+.    
T Consensus        97 ~~~--~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~v~~SS~~vyg~~~~~~~~  164 (351)
T 3ruf_A           97 VMK--GVDHVLHQAALGSV------PRSIVDPITTNATNITGFLNILHAAKN----AQVQSFTYAASSSTYGDHPALPKV  164 (351)
T ss_dssp             HTT--TCSEEEECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSSBC
T ss_pred             Hhc--CCCEEEECCccCCc------chhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEecHHhcCCCCCCCCc
Confidence            555  46699999997532      123445677899999999999998754    44568999999876652111    


Q ss_pred             -----CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          203 -----PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       203 -----~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                           .....|+.||.+.+.+++.++.+.   |++++.++|+.+-.|...
T Consensus       165 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~  211 (351)
T 3ruf_A          165 EENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQD  211 (351)
T ss_dssp             TTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCC
T ss_pred             cCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCC
Confidence                 124689999999999999999886   899999999999987643

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.84  E-value=2.3e-20  Score=160.51  Aligned_cols=172  Identities=17%  Similarity=0.132  Sum_probs=122.2

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG  134 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id  134 (255)
                      +++||||+|+||++++++|+++|++|++++|......+..+++.+.. +..+..+.+|++|.  +.++++.+.   .++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~--~~~~~~~~~---~~~D   75 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNE--ALMTEILHD---HAID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH-TSCCEEEECCTTCH--HHHHHHHHH---TTCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc-CCcceEEEccCCCH--HHHHHHhhc---cCCC
Confidence            58999999999999999999999999999875332122222232221 23466788999874  333333332   2577


Q ss_pred             EEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc----------CCCCC
Q 025260          135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI----------PSDPL  204 (255)
Q Consensus       135 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~----------~~~~~  204 (255)
                      +||||||....  .    .+.++.++.+++|+.++.++++++    ++.+.+++|++||...+..          +..|.
T Consensus        76 ~vih~A~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~  145 (338)
T 1udb_A           76 TVIHFAGLKAV--G----ESVQKPLEYYDNNVNGTLRLISAM----RAANVKNFIFSSSATVYGDNPKIPYVESFPTGTP  145 (338)
T ss_dssp             EEEECCSCCCH--H----HHHHCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCC
T ss_pred             EEEECCccCcc--c----cchhcHHHHHHHHHHHHHHHHHHH----HhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCC
Confidence            99999997532  1    122345678999999999998874    3445579999999776531          11133


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                      ...|+.||++.+.+++.++.+.  .|+++..++|+.+-.|
T Consensus       146 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~  183 (338)
T 1udb_A          146 QSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGA  183 (338)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECC
T ss_pred             CChHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceecCC
Confidence            6789999999999999999884  3789999998777543

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.84  E-value=2.5e-20  Score=162.62  Aligned_cols=176  Identities=18%  Similarity=0.088  Sum_probs=127.0

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhh-----HHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK-----LKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      |+++||||+|+||++++++|+++|++|++++|+.+.     +++..++.... ....+..+.+|++|.  +.++++.+  
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~Dl~d~--~~~~~~~~--   99 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH-IEGNMKLHYGDLTDS--TCLVKIIN--   99 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCH--HHHHHHHH--
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccc-cCCCceEEEccCCCH--HHHHHHHH--
Confidence            689999999999999999999999999999998643     22111111100 123577889999874  33333333  


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC--------
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP--------  200 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~--------  200 (255)
                       +.++|++|||||....      +.+.+++++.+++|+.++.++++++.+... ++.++||++||...+...        
T Consensus       100 -~~~~d~vih~A~~~~~------~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~-~~~~~iv~~SS~~~~~~~~~~~~~E~  171 (375)
T 1t2a_A          100 -EVKPTEIYNLGAQSHV------KISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKET  171 (375)
T ss_dssp             -HHCCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCTT
T ss_pred             -hcCCCEEEECCCcccc------cccccCHHHHHHHHHHHHHHHHHHHHHhCC-CccceEEEecchhhhCCCCCCCCCcc
Confidence             2256799999997532      123456788999999999999999987654 223799999998766421        


Q ss_pred             -CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          201 -SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       201 -~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                       +..+...|+.||++.+.+++.++.++   |+.+..+.|+.+..|.
T Consensus       172 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~  214 (375)
T 1t2a_A          172 TPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPR  214 (375)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTT
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCC
Confidence             11235789999999999999999886   7888889988776653

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.84  E-value=1.8e-20  Score=159.91  Aligned_cols=174  Identities=20%  Similarity=0.226  Sum_probs=116.4

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeC-ChhhHHHHHHHHHhhc-CCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKY-AKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r-~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      ||+++||||+|+||++++++|+++|++|++++| +.+..++. +.+.+.. ...++..+.+|++|.     +.+.+.+.+
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~-----~~~~~~~~~   74 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDV-SFLTNLPGASEKLHFFNADLSNP-----DSFAAAIEG   74 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCC-HHHHTSTTHHHHEEECCCCTTCG-----GGGHHHHTT
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHH-HHHHhhhccCCceEEEecCCCCH-----HHHHHHHcC
Confidence            688999999999999999999999999999998 65321110 1111100 012467788999875     233334443


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC--------
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD--------  202 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~--------  202 (255)
                        +|+|||+|+.. .    ..  ..+.+++.+++|+.|+.++++++.+.+   +.++||++||..+....+.        
T Consensus        75 --~d~vih~A~~~-~----~~--~~~~~~~~~~~nv~gt~~l~~aa~~~~---~~~~iV~~SS~~~~~~~~~~~~~~~e~  142 (322)
T 2p4h_X           75 --CVGIFHTASPI-D----FA--VSEPEEIVTKRTVDGALGILKACVNSK---TVKRFIYTSSGSAVSFNGKDKDVLDES  142 (322)
T ss_dssp             --CSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHTTCS---SCCEEEEEEEGGGTSCSSSCCSEECTT
T ss_pred             --CCEEEEcCCcc-c----CC--CCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeccHHHcccCCCCCeecCCc
Confidence              56999999642 1    11  111235689999999999999987642   3579999999875431110        


Q ss_pred             ------------CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          203 ------------PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       203 ------------~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                                  |...+|+.||++.+.+++.++.+   .|++++.++||.+.+|+..
T Consensus       143 ~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~  196 (322)
T 2p4h_X          143 DWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVC  196 (322)
T ss_dssp             CCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCS
T ss_pred             cccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCC
Confidence                        01116999999777666554433   5899999999999998754

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.83  E-value=6.9e-21  Score=162.06  Aligned_cols=166  Identities=19%  Similarity=0.141  Sum_probs=122.7

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG  134 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id  134 (255)
                      +++||||+|+||++++++|+++|++|++++|......+   .+     ...+..+.+|++|.  +.++++.+.   .++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~-----~~~~~~~~~Dl~~~--~~~~~~~~~---~~~d   68 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---NV-----PKGVPFFRVDLRDK--EGVERAFRE---FRPT   68 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---GS-----CTTCCEECCCTTCH--HHHHHHHHH---HCCS
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---hc-----ccCeEEEECCCCCH--HHHHHHHHh---cCCC
Confidence            58999999999999999999999999999985432111   00     12345678898874  333333322   2466


Q ss_pred             EEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCc-ccccc-----C-----CCC
Q 025260          135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSG-AAIVI-----P-----SDP  203 (255)
Q Consensus       135 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~-~~~~~-----~-----~~~  203 (255)
                      ++||+||....      ..+.+++++.+++|+.++.++++++..    .+.+++|++||. ..+..     +     +..
T Consensus        69 ~vi~~a~~~~~------~~~~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~  138 (311)
T 2p5y_A           69 HVSHQAAQASV------KVSVEDPVLDFEVNLLGGLNLLEACRQ----YGVEKLVFASTGGAIYGEVPEGERAEETWPPR  138 (311)
T ss_dssp             EEEECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCC
T ss_pred             EEEECccccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCChhhcCCCCCCCCcCCCCCCC
Confidence            99999997532      123455788999999999999998753    445799999997 32211     0     112


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                      +...|+.||++.+.+++.++.++   |++++.++|+.+.+|..
T Consensus       139 ~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~  178 (311)
T 2p5y_A          139 PKSPYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQ  178 (311)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTC
T ss_pred             CCChHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCC
Confidence            35689999999999999999886   89999999999999864

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.83  E-value=6.3e-20  Score=157.86  Aligned_cols=160  Identities=19%  Similarity=0.179  Sum_probs=120.7

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      ++++||||+|+||++++++|+++|++|++++|+.++.++.    .    ...+..+.+|++|.     +.+.+.+.+  +
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~----~~~~~~~~~Dl~d~-----~~~~~~~~~--~   78 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL----A----YLEPECRVAEMLDH-----AGLERALRG--L   78 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG----G----GGCCEEEECCTTCH-----HHHHHHTTT--C
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh----c----cCCeEEEEecCCCH-----HHHHHHHcC--C
Confidence            5799999999999999999999999999999987654321    1    12467788999875     345555554  6


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC---------
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL---------  204 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~---------  204 (255)
                      |++||+||...        .+.+++++.+++|+.++.++++++.+.    +.+++|++||...+..  .+.         
T Consensus        79 d~vih~a~~~~--------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~--~~~~~~~~E~~~  144 (342)
T 2x4g_A           79 DGVIFSAGYYP--------SRPRRWQEEVASALGQTNPFYAACLQA----RVPRILYVGSAYAMPR--HPQGLPGHEGLF  144 (342)
T ss_dssp             SEEEEC--------------------CHHHHHHHHHHHHHHHHHHH----TCSCEEEECCGGGSCC--CTTSSCBCTTCC
T ss_pred             CEEEECCccCc--------CCCCCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEECCHHhhCc--CCCCCCCCCCCC
Confidence            69999999642        123457889999999999999998763    4468999999887652  222         


Q ss_pred             -------chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          205 -------YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       205 -------~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                             ...|+.||++.+.+.+.++.   . |++++.++||.+.+|..
T Consensus       145 ~~p~~~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~  189 (342)
T 2x4g_A          145 YDSLPSGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELD  189 (342)
T ss_dssp             CSSCCTTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCC
T ss_pred             CCccccccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCC
Confidence                   67899999999999999886   3 89999999999999865

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.83  E-value=2.5e-20  Score=160.79  Aligned_cols=169  Identities=15%  Similarity=0.088  Sum_probs=128.1

Q ss_pred             cEEEEECCCCchHHHHHHHHHHc--CCcEEEEeCChhh-HHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKT--GLNLVLVGRNPDK-LKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~--G~~V~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      ++++||||+|+||++++++|+++  |++|++++|+... ..+..+++    ....+..+.+|++|.     +.+.+.+.+
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~-----~~~~~~~~~   75 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI----LGDRVELVVGDIADA-----ELVDKLAAK   75 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG----CSSSEEEEECCTTCH-----HHHHHHHTT
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh----ccCCeEEEECCCCCH-----HHHHHHhhc
Confidence            67999999999999999999999  8999999997531 11111111    124678889999875     344455554


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC----------
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP----------  200 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~----------  200 (255)
                      .  |++|||||....      +.+.++++..+++|+.++.++++++.+.    + +++|++||...+...          
T Consensus        76 ~--d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~~~~~  142 (348)
T 1oc2_A           76 A--DAIVHYAAESHN------DNSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVYGDLPLREDLPGHG  142 (348)
T ss_dssp             C--SEEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGGGSTTTT
T ss_pred             C--CEEEECCcccCc------cchhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccceeCCCcccccccccc
Confidence            3  699999997532      2233456788999999999999998774    2 499999997644311          


Q ss_pred             -----------CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          201 -----------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       201 -----------~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                                 +.+....|+.||++.+.+++.++.++   |++++.++||.+.+|...
T Consensus       143 ~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~  197 (348)
T 1oc2_A          143 EGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQH  197 (348)
T ss_dssp             CSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCC
T ss_pred             cccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCC
Confidence                       12345789999999999999999887   899999999999998753

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.83  E-value=9.2e-21  Score=158.00  Aligned_cols=157  Identities=17%  Similarity=0.170  Sum_probs=121.5

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      |+++||||+|+||++++++|+++|++|++++|+..+..           ...+..+.+|++|.     +.+.+.+.+  +
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~-----~~~~~~~~~--~   64 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-----------EAHEEIVACDLADA-----QAVHDLVKD--C   64 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-----------CTTEEECCCCTTCH-----HHHHHHHTT--C
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-----------CCCccEEEccCCCH-----HHHHHHHcC--C
Confidence            67999999999999999999999999999999875311           12357788999874     334444553  6


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC----------C
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD----------P  203 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~----------~  203 (255)
                      |++|||||...          .+.+++.+++|+.++.++++++.+    ++.++||++||...+...+.          .
T Consensus        65 d~vi~~a~~~~----------~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~  130 (267)
T 3ay3_A           65 DGIIHLGGVSV----------ERPWNDILQANIIGAYNLYEAARN----LGKPRIVFASSNHTIGYYPRTTRIDTEVPRR  130 (267)
T ss_dssp             SEEEECCSCCS----------CCCHHHHHHHTHHHHHHHHHHHHH----TTCCEEEEEEEGGGSTTSBTTSCBCTTSCCC
T ss_pred             CEEEECCcCCC----------CCCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCHHHhCCCCCCCCCCCCCCCC
Confidence            69999999751          123577899999999999998764    45679999999876642111          1


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeee-eeCC
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLL-CFYN  245 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v-~T~~  245 (255)
                      ....|+.||++.+.+++.++.+   .|++++.++||.+ .++.
T Consensus       131 ~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~~~~~  170 (267)
T 3ay3_A          131 PDSLYGLSKCFGEDLASLYYHK---FDIETLNIRIGSCFPKPK  170 (267)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHT---TCCCEEEEEECBCSSSCC
T ss_pred             CCChHHHHHHHHHHHHHHHHHH---cCCCEEEEeceeecCCCC
Confidence            3478999999999999988654   5899999999998 5543

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.83  E-value=8.4e-20  Score=157.53  Aligned_cols=160  Identities=18%  Similarity=0.118  Sum_probs=121.6

Q ss_pred             cccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHH
Q 025260           47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKE  126 (255)
Q Consensus        47 ~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  126 (255)
                      ...+.++|+||||||+|+||.+++++|+++|++|++++|+.+.              ..+..+.+|++|.     +.+.+
T Consensus        13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--------------~~~~~~~~Dl~d~-----~~~~~   73 (347)
T 4id9_A           13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG--------------TGGEEVVGSLEDG-----QALSD   73 (347)
T ss_dssp             --------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS--------------SCCSEEESCTTCH-----HHHHH
T ss_pred             cccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC--------------CCccEEecCcCCH-----HHHHH
Confidence            3445678999999999999999999999999999999998764              2356778899875     33444


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc-------
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI-------  199 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~-------  199 (255)
                      .+.  ++|++||+||....        +.+.++..+++|+.++.++++++..    .+.+++|++||...+..       
T Consensus        74 ~~~--~~d~vih~A~~~~~--------~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~V~~SS~~vyg~~~~~~~~  139 (347)
T 4id9_A           74 AIM--GVSAVLHLGAFMSW--------APADRDRMFAVNVEGTRRLLDAASA----AGVRRFVFASSGEVYPENRPEFLP  139 (347)
T ss_dssp             HHT--TCSEEEECCCCCCS--------SGGGHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGTTTTSCSSSS
T ss_pred             HHh--CCCEEEECCcccCc--------chhhHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEECCHHHhCCCCCCCCC
Confidence            445  46699999997532        2233488999999999999998654    45579999999765542       


Q ss_pred             ----CCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeee
Q 025260          200 ----PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLC  242 (255)
Q Consensus       200 ----~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~  242 (255)
                          .+......|+.||.+.+.+++.++.+.   |++++.++|+.+.
T Consensus       140 ~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~  183 (347)
T 4id9_A          140 VTEDHPLCPNSPYGLTKLLGEELVRFHQRSG---AMETVILRFSHTQ  183 (347)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS---SSEEEEEEECEEE
T ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHhc---CCceEEEccceEe
Confidence                012346789999999999999998874   8999999999998

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.82  E-value=3.4e-20  Score=159.92  Aligned_cols=176  Identities=17%  Similarity=0.094  Sum_probs=124.7

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcC--CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G--~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      .++++|+||||+|+||.+++++|+++|  ++|+..+|......  .+.+........+.++.+|++|.  +.++++   +
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~--~~~~~~---~   94 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQDHPNYYFVKGEIQNG--ELLEHV---I   94 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCH--HHHHHH---H
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhccCCCeEEEEcCCCCH--HHHHHH---H
Confidence            457899999999999999999999999  67777777642111  11112222235688899999975  333333   3


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC--------
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP--------  200 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~--------  200 (255)
                      .+.++|++||+||....      ..+.++++..+++|+.++..+++++..    .+.+++|++||...+...        
T Consensus        95 ~~~~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~v~~SS~~vy~~~~~~~~~~E  164 (346)
T 4egb_A           95 KERDVQVIVNFAAESHV------DRSIENPIPFYDTNVIGTVTLLELVKK----YPHIKLVQVSTDEVYGSLGKTGRFTE  164 (346)
T ss_dssp             HHHTCCEEEECCCCC---------------CHHHHHHTHHHHHHHHHHHH----STTSEEEEEEEGGGGCCCCSSCCBCT
T ss_pred             hhcCCCEEEECCcccch------hhhhhCHHHHHHHHHHHHHHHHHHHHh----cCCCEEEEeCchHHhCCCCcCCCcCC
Confidence            33246799999998643      124455688899999999999998754    455789999997665521        


Q ss_pred             --CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          201 --SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       201 --~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                        +......|+.||.+.+.+++.++.+.   |++++.++|+.+-+|..
T Consensus       165 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~  209 (346)
T 4egb_A          165 ETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQ  209 (346)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTC
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCC
Confidence              11124789999999999999999885   89999999999998764

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.82  E-value=6.7e-20  Score=160.24  Aligned_cols=175  Identities=17%  Similarity=0.115  Sum_probs=125.2

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhh-----HHHHHHHHHhhcCCc-eEEEEEEECCCCcHHHHHHHHHH
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK-----LKDVSDSIQAKYAKT-QIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~-----~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      |+++||||+|+||.+++++|+++|++|++++|+.+.     ++...++....  .. .+..+.+|++|.  +.++++.+ 
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~--~~~~~~~~-  103 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV--NKALMKLHYADLTDA--SSLRRWID-  103 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------CCEEEEECCTTCH--HHHHHHHH-
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccc--cccceEEEECCCCCH--HHHHHHHH-
Confidence            689999999999999999999999999999998654     22221111111  12 577889999874  33333333 


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECCccccccC------
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIVIP------  200 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS~~~~~~~------  200 (255)
                        +.++|+||||||....      +.+.++++..+++|+.++.++++++.+.+.++ +++++|++||...+...      
T Consensus       104 --~~~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E  175 (381)
T 1n7h_A          104 --VIKPDEVYNLAAQSHV------AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSE  175 (381)
T ss_dssp             --HHCCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCT
T ss_pred             --hcCCCEEEECCcccCc------cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCC
Confidence              2256799999997532      12345678899999999999999999977553 35799999998765421      


Q ss_pred             --CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          201 --SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       201 --~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                        +......|+.||++.+.+++.++.++   |+.+..+.|+.+..|
T Consensus       176 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~r~~~~~gp  218 (381)
T 1n7h_A          176 TTPFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESP  218 (381)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECT
T ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEeCceeCC
Confidence              12345789999999999999999886   566666666554443

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.82  E-value=1.1e-19  Score=156.19  Aligned_cols=169  Identities=20%  Similarity=0.164  Sum_probs=126.7

Q ss_pred             EEEEECCCCchHHHHHHHHHHc---C---CcEEEEeCChhhH-HHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           55 WALVTGPTDGIGKSFAFQLAKT---G---LNLVLVGRNPDKL-KDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~---G---~~V~l~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      +++||||+|+||++++++|+++   |   ++|++++|+.... .+..+++.   ....+..+.+|++|.     +.+.+.
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~-----~~~~~~   73 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD---ADPRLRFVHGDIRDA-----GLLARE   73 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT---TCTTEEEEECCTTCH-----HHHHHH
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcc---cCCCeEEEEcCCCCH-----HHHHHH
Confidence            5899999999999999999997   8   9999999864210 01111111   134578889999875     344444


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC-------
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP-------  200 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~-------  200 (255)
                      ++  ++|++|||||....      +.+.+++++.+++|+.++.++++++.+.    +.+++|++||...+...       
T Consensus        74 ~~--~~d~Vih~A~~~~~------~~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~~~~~v~~SS~~vyg~~~~~~~~E  141 (337)
T 1r6d_A           74 LR--GVDAIVHFAAESHV------DRSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHVSTNQVYGSIDSGSWTE  141 (337)
T ss_dssp             TT--TCCEEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEGGGGCCCSSSCBCT
T ss_pred             hc--CCCEEEECCCccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEecchHHhCCCCCCCCCC
Confidence            54  46699999997532      1233456788999999999999998764    34689999997654321       


Q ss_pred             --CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          201 --SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       201 --~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                        +......|+.||++.+.+++.++.++   |++++.++|+.+.+|..
T Consensus       142 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~  186 (337)
T 1r6d_A          142 SSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQ  186 (337)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTC
T ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCC
Confidence              22346789999999999999999886   79999999999999875

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.82  E-value=7.7e-20  Score=160.02  Aligned_cols=173  Identities=12%  Similarity=-0.022  Sum_probs=130.4

Q ss_pred             cccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHH
Q 025260           47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKE  126 (255)
Q Consensus        47 ~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  126 (255)
                      ..+..++++++||||+|+||++++++|+++|++|++++|+.++..+.      .  ...+..+.+|++|.     +.+.+
T Consensus        23 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~--~~~v~~~~~Dl~d~-----~~~~~   89 (379)
T 2c5a_A           23 QYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------D--MFCDEFHLVDLRVM-----ENCLK   89 (379)
T ss_dssp             CSCTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------G--GTCSEEEECCTTSH-----HHHHH
T ss_pred             ccccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------c--cCCceEEECCCCCH-----HHHHH
Confidence            34445678999999999999999999999999999999987543211      0  12456788999875     33444


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC------
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP------  200 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~------  200 (255)
                      .+.  ++|++||+||....  ...   +.+++++.+++|+.++.++++++..    .+.+++|++||...+...      
T Consensus        90 ~~~--~~d~Vih~A~~~~~--~~~---~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~~V~~SS~~v~~~~~~~~~~  158 (379)
T 2c5a_A           90 VTE--GVDHVFNLAADMGG--MGF---IQSNHSVIMYNNTMISFNMIEAARI----NGIKRFFYASSACIYPEFKQLETT  158 (379)
T ss_dssp             HHT--TCSEEEECCCCCCC--HHH---HTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEEEEGGGSCGGGSSSSS
T ss_pred             HhC--CCCEEEECceecCc--ccc---cccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeehheeCCCCCCCcc
Confidence            444  46699999997532  111   1234678899999999999998754    445699999997655421      


Q ss_pred             ----------CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          201 ----------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       201 ----------~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                                +......|+.||++.+.+++.++.+.   |++++.++||.+.+|..
T Consensus       159 ~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~  211 (379)
T 2c5a_A          159 NVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFG  211 (379)
T ss_dssp             SCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTS
T ss_pred             CCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCC
Confidence                      12235689999999999999998875   89999999999999864

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.82  E-value=8.1e-20  Score=156.83  Aligned_cols=173  Identities=16%  Similarity=0.019  Sum_probs=125.4

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHH-HHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK-DVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .++.+|||||+|+||++++++|+++|++|++++|+.+... +..+.+   .....+..+.+|++|.  +.++++.+   +
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~--~~~~~~~~---~   84 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLREL---GIEGDIQYEDGDMADA--CSVQRAVI---K   84 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHT---TCGGGEEEEECCTTCH--HHHHHHHH---H
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhc---cccCceEEEECCCCCH--HHHHHHHH---H
Confidence            3788999999999999999999999999999999875421 111111   1134577889999874  33333333   2


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCC--------
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPS--------  201 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~--------  201 (255)
                      .++|++||+||....      +.+.++++..+++|+.++.++++++.+.    + .+++|++||...+...+        
T Consensus        85 ~~~d~Vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v~g~~~~~~~~E~~  154 (335)
T 1rpn_A           85 AQPQEVYNLAAQSFV------GASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFGLIQAERQDENT  154 (335)
T ss_dssp             HCCSEEEECCSCCCH------HHHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCSCSSSSBCTTS
T ss_pred             cCCCEEEECccccch------hhhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHHhCCCCCCCCCccc
Confidence            256799999997532      1112345788999999999999997653    3 37999999977654211        


Q ss_pred             -CCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          202 -DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       202 -~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                       ......|+.||++.+.+++.++.++   |+++..++|+.+-.|.
T Consensus       155 ~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~  196 (335)
T 1rpn_A          155 PFYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPL  196 (335)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTT
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCC
Confidence             1124689999999999999999876   7888999999887764

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.82  E-value=1.8e-19  Score=154.39  Aligned_cols=166  Identities=15%  Similarity=0.076  Sum_probs=125.6

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      ++++||||+|+||++++++|+++|++|++++|+.....+   .+     ...+..+.+|++|.  +.++++.+.   .++
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~-----~~~~~~~~~D~~~~--~~~~~~~~~---~~~   68 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED---AI-----TEGAKFYNGDLRDK--AFLRDVFTQ---ENI   68 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GS-----CTTSEEEECCTTCH--HHHHHHHHH---SCE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh---hc-----CCCcEEEECCCCCH--HHHHHHHhh---cCC
Confidence            579999999999999999999999999999987654221   11     12466788999874  333333322   367


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC---------CCCC
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDPL  204 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~---------~~~~  204 (255)
                      |++||+||....      ..+.+++++.+++|+.++.++++++.    +.+.+++|++||...+..+         +...
T Consensus        69 d~vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~  138 (330)
T 2c20_A           69 EAVMHFAADSLV------GVSMEKPLQYYNNNVYGALCLLEVMD----EFKVDKFIFSSTAATYGEVDVDLITEETMTNP  138 (330)
T ss_dssp             EEEEECCCCCCH------HHHHHSHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEECCGGGGCSCSSSSBCTTSCCCC
T ss_pred             CEEEECCcccCc------cccccCHHHHHHHHhHHHHHHHHHHH----HcCCCEEEEeCCceeeCCCCCCCCCcCCCCCC
Confidence            899999997532      11345578899999999999998864    3455799999997765421         1123


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                      ...|+.||++.+.+++.++.++   |++++.++|+.+-.|.
T Consensus       139 ~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~  176 (330)
T 2c20_A          139 TNTYGETKLAIEKMLHWYSQAS---NLRYKIFRYFNVAGAT  176 (330)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHTS---SCEEEEEECSEEECCC
T ss_pred             CChHHHHHHHHHHHHHHHHHHh---CCcEEEEecCcccCCC
Confidence            5789999999999999998775   8999999999998774

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.82  E-value=4.7e-20  Score=149.86  Aligned_cols=158  Identities=15%  Similarity=0.182  Sum_probs=121.3

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      ++++||||+|+||++++++|+++|++|++++|++++.++.         ...+..+.+|++|.     +.+.+.+.+  +
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~Dl~d~-----~~~~~~~~~--~   68 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE---------NEHLKVKKADVSSL-----DEVCEVCKG--A   68 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC---------CTTEEEECCCTTCH-----HHHHHHHTT--C
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc---------cCceEEEEecCCCH-----HHHHHHhcC--C
Confidence            6899999999999999999999999999999998764321         24678899999975     345555554  5


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC--------CCCCc
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP--------SDPLY  205 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~--------~~~~~  205 (255)
                      |++|||||....         .   .+.+++|+.++.++++++..    .+.+++|++||..+....        +....
T Consensus        69 d~vi~~a~~~~~---------~---~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~  132 (227)
T 3dhn_A           69 DAVISAFNPGWN---------N---PDIYDETIKVYLTIIDGVKK----AGVNRFLMVGGAGSLFIAPGLRLMDSGEVPE  132 (227)
T ss_dssp             SEEEECCCC------------------CCSHHHHHHHHHHHHHHH----TTCSEEEEECCSTTSEEETTEEGGGTTCSCG
T ss_pred             CEEEEeCcCCCC---------C---hhHHHHHHHHHHHHHHHHHH----hCCCEEEEeCChhhccCCCCCccccCCcchH
Confidence            699999986421         1   12688999999888888644    455689999998765521        11236


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                      ..|+.+|++.+.+.+.++.+   .|++++.++||.+.+|..
T Consensus       133 ~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~g~~~  170 (227)
T 3dhn_A          133 NILPGVKALGEFYLNFLMKE---KEIDWVFFSPAADMRPGV  170 (227)
T ss_dssp             GGHHHHHHHHHHHHHTGGGC---CSSEEEEEECCSEEESCC
T ss_pred             HHHHHHHHHHHHHHHHHhhc---cCccEEEEeCCcccCCCc
Confidence            78999999999988888764   489999999999988754

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.81  E-value=5.5e-20  Score=158.15  Aligned_cols=172  Identities=20%  Similarity=0.215  Sum_probs=118.6

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH--HHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV--SDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      +|++|||||+|+||++++++|+++|++|+++.|+.+..++.  .+++. .  ...+..+.+|++|.     +.+.+.+.+
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~~~~~~Dl~d~-----~~~~~~~~~   80 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-E--LGDLKIFRADLTDE-----LSFEAPIAG   80 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-G--GSCEEEEECCTTTS-----SSSHHHHTT
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-C--CCcEEEEecCCCCh-----HHHHHHHcC
Confidence            68999999999999999999999999999999986543211  11221 1  23567788999875     123333333


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc---CC------
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI---PS------  201 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~---~~------  201 (255)
                        +|++||+||...     ..  ..+..++.+++|+.|+.++++++.+..   +.++||++||.++...   .+      
T Consensus        81 --~D~Vih~A~~~~-----~~--~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~~~~~~~~~~~~~~~  148 (338)
T 2rh8_A           81 --CDFVFHVATPVH-----FA--SEDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAAVTINQLDGTGLVVD  148 (338)
T ss_dssp             --CSEEEEESSCCC-----C-----------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHHHHHHHHTCSCCCCC
T ss_pred             --CCEEEEeCCccC-----CC--CCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHHeecCCcCCCCcccC
Confidence              569999998641     11  111224589999999999999987632   2468999999763210   00      


Q ss_pred             --C--------C---CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          202 --D--------P---LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       202 --~--------~---~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                        .        +   ...+|+.||++.+.+++.++.+.   |+++++++|+.+.+|...
T Consensus       149 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~~lrp~~v~Gp~~~  204 (338)
T 2rh8_A          149 EKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN---NIDLITVIPTLMAGSSLT  204 (338)
T ss_dssp             TTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHHH---TCCEEEEEECEEESCCSS
T ss_pred             hhhccchhhccccCCccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCC
Confidence              0        0   11259999999888887776553   899999999999998753

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.81  E-value=4.5e-19  Score=143.68  Aligned_cols=151  Identities=11%  Similarity=0.097  Sum_probs=110.9

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG  134 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id  134 (255)
                      .++||||+|+||++++++|+++|++|++++|+++++++..        ...+..+.+|++|...       +.+++  +|
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~~~~~~~D~~d~~~-------~~~~~--~d   64 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL--------GATVATLVKEPLVLTE-------ADLDS--VD   64 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT--------CTTSEEEECCGGGCCH-------HHHTT--CS
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc--------CCCceEEecccccccH-------hhccc--CC
Confidence            5999999999999999999999999999999987765331        2356788999987622       45554  56


Q ss_pred             EEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC-----------
Q 025260          135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP-----------  203 (255)
Q Consensus       135 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~-----------  203 (255)
                      ++|||||....  .   +        ..++|+.++    +.+++.+++++ +++|++||..+....+..           
T Consensus        65 ~vi~~ag~~~~--~---~--------~~~~n~~~~----~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~  126 (224)
T 3h2s_A           65 AVVDALSVPWG--S---G--------RGYLHLDFA----THLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESA  126 (224)
T ss_dssp             EEEECCCCCTT--S---S--------CTHHHHHHH----HHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGG
T ss_pred             EEEECCccCCC--c---c--------hhhHHHHHH----HHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCC
Confidence            99999998621  0   0        134566665    55555566666 999999998766521110           


Q ss_pred             -CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          204 -LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       204 -~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                       ....|+.+|++.+.+    .......|++++.++||++.++
T Consensus       127 ~~~~~y~~sK~~~e~~----~~~~~~~~i~~~ivrp~~v~g~  164 (224)
T 3h2s_A          127 ASQPWYDGALYQYYEY----QFLQMNANVNWIGISPSEAFPS  164 (224)
T ss_dssp             GGSTTHHHHHHHHHHH----HHHTTCTTSCEEEEEECSBCCC
T ss_pred             ccchhhHHHHHHHHHH----HHHHhcCCCcEEEEcCccccCC
Confidence             057899999988854    2222356999999999999987

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.81  E-value=2.3e-19  Score=159.35  Aligned_cols=171  Identities=16%  Similarity=0.111  Sum_probs=125.1

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh---hHHHHHHHHHhhcC-------CceEEEEEEECCCCcHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD---KLKDVSDSIQAKYA-------KTQIKSVVVDFSGDLDEG  120 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~---~~~~~~~~~~~~~~-------~~~~~~~~~d~~~~~~~~  120 (255)
                      ..+++|+||||+|+||.+++++|+++|++|++++|+++   ..+...+.+.+.++       ..++..+.+|+++.  + 
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~--~-  143 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECM--D-  143 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC-----C-
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCc--c-
Confidence            45789999999999999999999999999999999987   33444444433211       24688899999873  1 


Q ss_pred             HHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC
Q 025260          121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP  200 (255)
Q Consensus       121 ~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~  200 (255)
                        .+. ..+  ++|+||||||....         .+.+++.+++|+.++.++++++.+     +.+++|++||... ...
T Consensus       144 --~l~-~~~--~~d~Vih~A~~~~~---------~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~~-G~~  203 (427)
T 4f6c_A          144 --DVV-LPE--NMDTIIHAGARTDH---------FGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISV-GTY  203 (427)
T ss_dssp             --CCC-CSS--CCSEEEECCCCC----------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEGGG-GSE
T ss_pred             --cCC-CcC--CCCEEEECCcccCC---------CCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEECchHh-CCC
Confidence              111 333  57799999997531         245688899999999999999876     3468999999876 210


Q ss_pred             -----------------CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          201 -----------------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       201 -----------------~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                                       +......|+.||++.+.+.+.++.    .|+++++++||.|.++....
T Consensus       204 ~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~  264 (427)
T 4f6c_A          204 FDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGR  264 (427)
T ss_dssp             ECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSC
T ss_pred             ccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCC
Confidence                             022567999999999999988753    58999999999999886553

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.81  E-value=1.1e-19  Score=154.78  Aligned_cols=164  Identities=16%  Similarity=0.113  Sum_probs=120.6

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      |+++||||+|+||++++++|+++|..|++..|+....+..         ...+..+.+|++++      .+.+.+.  ++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~---------~~~~~~~~~Dl~~~------~~~~~~~--~~   64 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV---------NEAARLVKADLAAD------DIKDYLK--GA   64 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS---------CTTEEEECCCTTTS------CCHHHHT--TC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc---------CCCcEEEECcCChH------HHHHHhc--CC
Confidence            4699999999999999999999995454444443322111         33577888898862      1223333  46


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC---------CCCC
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDPL  204 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~---------~~~~  204 (255)
                      |++||+||....      +.+.+++++.+++|+.++.++++++.    +.+.+++|++||...+...         +..+
T Consensus        65 d~vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~  134 (313)
T 3ehe_A           65 EEVWHIAANPDV------RIGAENPDEIYRNNVLATYRLLEAMR----KAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHP  134 (313)
T ss_dssp             SEEEECCCCCCC------C-CCCCHHHHHHHHHHHHHHHHHHHH----HHTCCEEEEECCGGGGCSCSSSSBCTTSCCCC
T ss_pred             CEEEECCCCCCh------hhhhhCHHHHHHHHHHHHHHHHHHHH----HcCCCeEEEeCchHHhCcCCCCCCCCCCCCCC
Confidence            699999996422      33445578899999999999998854    3456799999998766421         2234


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      ...|+.||.+.+.+++.++.++   |++++.++|+.+-+|...
T Consensus       135 ~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~  174 (313)
T 3ehe_A          135 ISLYGASKLACEALIESYCHTF---DMQAWIYRFANVIGRRST  174 (313)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCCC
Confidence            6789999999999999999886   899999999999987543

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.81  E-value=2.3e-19  Score=154.54  Aligned_cols=176  Identities=18%  Similarity=0.149  Sum_probs=127.6

Q ss_pred             cccccCCcEEEEECCCCchHHHHHHHHHHcC-------CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHH
Q 025260           47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTG-------LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDE  119 (255)
Q Consensus        47 ~~~~~~gk~vlITGas~gIG~~la~~la~~G-------~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  119 (255)
                      +++.+++++++||||+|+||.+++++|+++|       ++|++++|+.+...+       . ....+..+.+|++|.  +
T Consensus         8 ~~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-------~-~~~~~~~~~~Dl~d~--~   77 (342)
T 2hrz_A            8 ENLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-------G-FSGAVDARAADLSAP--G   77 (342)
T ss_dssp             CCSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-------T-CCSEEEEEECCTTST--T
T ss_pred             CCCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-------c-cCCceeEEEcCCCCH--H
Confidence            4556779999999999999999999999999       899999998653321       0 134678889999986  2


Q ss_pred             HHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECCccccc
Q 025260          120 GVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIV  198 (255)
Q Consensus       120 ~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS~~~~~  198 (255)
                      .++++.+  +  ++|++|||||...       ..+.+++++.+++|+.++.++++++.+...++ +.+++|++||.+.+.
T Consensus        78 ~~~~~~~--~--~~d~vih~A~~~~-------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~  146 (342)
T 2hrz_A           78 EAEKLVE--A--RPDVIFHLAAIVS-------GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFG  146 (342)
T ss_dssp             HHHHHHH--T--CCSEEEECCCCCH-------HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCC
T ss_pred             HHHHHHh--c--CCCEEEECCccCc-------ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhC
Confidence            2332222  2  5679999999752       12345678899999999999999987743222 247999999987665


Q ss_pred             cCCCC----------CchhchHHHHHHHHHHHHHHHHH--ccCCceEEEee--eeeeeeC
Q 025260          199 IPSDP----------LYSVYAATKAYIDQFSRSLYVEY--RKSGIDVQCQV--LFLLCFY  244 (255)
Q Consensus       199 ~~~~~----------~~~~Y~asK~al~~~~~~l~~e~--~~~gi~v~~v~--Pg~v~T~  244 (255)
                      .. .+          ....|+.||++.+.+++.++.+.  ....++++.+.  ||...++
T Consensus       147 ~~-~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~  205 (342)
T 2hrz_A          147 AP-LPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAA  205 (342)
T ss_dssp             SS-CCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCS
T ss_pred             CC-CCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcch
Confidence            21 11          46789999999999999888764  11234555555  7765543

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.81  E-value=1.1e-19  Score=156.20  Aligned_cols=163  Identities=16%  Similarity=0.109  Sum_probs=118.1

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      +++++++||||+|+||++++++|+++|++|++++|+.....+..++      ...+..+.+|++|.  +.++++.+   +
T Consensus        19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~------~~~~~~~~~Dl~d~--~~~~~~~~---~   87 (333)
T 2q1w_A           19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKD------HPNLTFVEGSIADH--ALVNQLIG---D   87 (333)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCC------CTTEEEEECCTTCH--HHHHHHHH---H
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhh------cCCceEEEEeCCCH--HHHHHHHh---c
Confidence            5689999999999999999999999999999999986432111100      13577889999875  33333332   2


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccc----cCC-----
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV----IPS-----  201 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~----~~~-----  201 (255)
                      .++|++|||||....  .     +.++++  +++|+.++.++++++.+    .+.++||++||...+.    .+.     
T Consensus        88 ~~~D~vih~A~~~~~--~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~g~~~~~~~~~~~E  154 (333)
T 2q1w_A           88 LQPDAVVHTAASYKD--P-----DDWYND--TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALCYGVKPIQQPVRLDH  154 (333)
T ss_dssp             HCCSEEEECCCCCSC--T-----TCHHHH--HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGCSCCCSSSBCTTS
T ss_pred             cCCcEEEECceecCC--C-----ccCChH--HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCcccCCCCcCC
Confidence            246799999997532  1     234444  99999999999999876    3457999999977653    111     


Q ss_pred             --CCCchhchHHHHHHHHHHHH-HHHHHccCCceEEEeeeeeeeeCC
Q 025260          202 --DPLYSVYAATKAYIDQFSRS-LYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       202 --~~~~~~Y~asK~al~~~~~~-l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                        .|....|+.||++.+.+++. ++        ++..++|+.+-.|.
T Consensus       155 ~~~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~  193 (333)
T 2q1w_A          155 PRNPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPR  193 (333)
T ss_dssp             CCCCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTT
T ss_pred             CCCCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcC
Confidence              22227899999999998887 54        67788898887765

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.80  E-value=3.7e-19  Score=142.04  Aligned_cols=149  Identities=15%  Similarity=0.155  Sum_probs=112.8

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      +++++||||+|+||++++++|+++|++|++++|++++.++.        ....+..+.+|++|.     +.+.+.+.+  
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~D~~~~-----~~~~~~~~~--   67 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQA-----ADVDKTVAG--   67 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSH-----HHHHHHHTT--
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc--------cCCceEEEEecCCCH-----HHHHHHHcC--
Confidence            47899999999999999999999999999999998754321        023567888999875     344455554  


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC----Cchhc
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP----LYSVY  208 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~----~~~~Y  208 (255)
                      +|++|||||....     .+        ..++|+.++..+++++..    ++.+++|++||...+.  ..+    ....|
T Consensus        68 ~d~vi~~a~~~~~-----~~--------~~~~n~~~~~~~~~~~~~----~~~~~~v~~Ss~~~~~--~~~~~~~~~~~y  128 (206)
T 1hdo_A           68 QDAVIVLLGTRND-----LS--------PTTVMSEGARNIVAAMKA----HGVDKVVACTSAFLLW--DPTKVPPRLQAV  128 (206)
T ss_dssp             CSEEEECCCCTTC-----CS--------CCCHHHHHHHHHHHHHHH----HTCCEEEEECCGGGTS--CTTCSCGGGHHH
T ss_pred             CCEEEECccCCCC-----CC--------ccchHHHHHHHHHHHHHH----hCCCeEEEEeeeeecc--CcccccccchhH
Confidence            5699999997532     11        124788888777777543    4557999999987665  222    56789


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeee
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLC  242 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~  242 (255)
                      +.+|++++.+.+       ..|++++.++||.+.
T Consensus       129 ~~~K~~~e~~~~-------~~~i~~~~lrp~~~~  155 (206)
T 1hdo_A          129 TDDHIRMHKVLR-------ESGLKYVAVMPPHIG  155 (206)
T ss_dssp             HHHHHHHHHHHH-------HTCSEEEEECCSEEE
T ss_pred             HHHHHHHHHHHH-------hCCCCEEEEeCCccc
Confidence            999999998873       258999999999993

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.80  E-value=3.1e-19  Score=156.00  Aligned_cols=171  Identities=11%  Similarity=-0.001  Sum_probs=128.9

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcC-CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G-~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      .+++++++||||+|+||++++++|+++| ++|++++|+.+...+..+      ....+..+.+|++|.     +.+.+.+
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~------~~~~v~~~~~Dl~d~-----~~l~~~~   97 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP------DHPAVRFSETSITDD-----ALLASLQ   97 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC------CCTTEEEECSCTTCH-----HHHHHCC
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc------CCCceEEEECCCCCH-----HHHHHHh
Confidence            4678999999999999999999999999 999999998654221110      134577888999875     3444445


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECCcccccc--------
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIVI--------  199 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS~~~~~~--------  199 (255)
                      .  ++|++||+||....      ..+.+++++.+++|+.++.++++++..    . +.+++|++||...+..        
T Consensus        98 ~--~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~V~~SS~~vyg~~~~~~~~~  165 (377)
T 2q1s_A           98 D--EYDYVFHLATYHGN------QSSIHDPLADHENNTLTTLKLYERLKH----FKRLKKVVYSAAGCSIAEKTFDDAKA  165 (377)
T ss_dssp             S--CCSEEEECCCCSCH------HHHHHCHHHHHHHHTHHHHHHHHHHTT----CSSCCEEEEEEEC-------------
T ss_pred             h--CCCEEEECCCccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEeCCHHHcCCCCCCCcCc
Confidence            5  56699999997532      123345678999999999999998743    3 4468999999764321        


Q ss_pred             -C-----CC-CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          200 -P-----SD-PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       200 -~-----~~-~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                       .     +. .....|+.||++.+.+++.++.+.   |++++.++||.+.+|..
T Consensus       166 ~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~  216 (377)
T 2q1s_A          166 TEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGE  216 (377)
T ss_dssp             -CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTC
T ss_pred             ccccccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCC
Confidence             0     11 335689999999999999998876   89999999999998865

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.80  E-value=8e-19  Score=151.01  Aligned_cols=166  Identities=15%  Similarity=0.128  Sum_probs=124.4

Q ss_pred             cEEEEECCCCchHHHHHHHHHHc-CCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~-G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      ++++||||+|+||++++++|+++ |++|++++|+.++.++..       ....+..+.+|++|.. +.++   +.+.  +
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~D~~~~~-~~~~---~~~~--~   67 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHS-EWIE---YHVK--K   67 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTCS-HHHH---HHHH--H
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-------cCCCeEEEeccccCcH-HHHH---hhcc--C
Confidence            46999999999999999999998 899999999876543211       1345788899998731 2222   2333  3


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC----------
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD----------  202 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~----------  202 (255)
                      +|++||+||...+.      ...+++++.+++|+.++.++++++..    .+ +++|++||...+.....          
T Consensus        68 ~d~vih~A~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~  136 (345)
T 2bll_A           68 CDVVLPLVAIATPI------EYTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDEDHSNL  136 (345)
T ss_dssp             CSEEEECBCCCCHH------HHHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCCSSBCTTTCCC
T ss_pred             CCEEEEcccccCcc------chhcCHHHHHHHHHHHHHHHHHHHHH----hC-CeEEEEecHHHcCCCCCCCcCCccccc
Confidence            56999999975321      11234677899999999999888754    34 79999999766542110          


Q ss_pred             ------CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          203 ------PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       203 ------~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                            .....|+.||.+.+.+++.++.+.   |++++.++||.+.+|..
T Consensus       137 ~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~  183 (345)
T 2bll_A          137 IVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRL  183 (345)
T ss_dssp             BCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSC
T ss_pred             ccCcccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCc
Confidence                  112379999999999999998876   89999999999988764

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.80  E-value=2.4e-19  Score=146.86  Aligned_cols=148  Identities=16%  Similarity=0.099  Sum_probs=103.5

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcC-CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G-~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|+++||||+||||++++++|+++| ++|++++|+++++++.        ....+..+.+|++|.     +.+.+.+.+ 
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~--------~~~~~~~~~~Dl~d~-----~~~~~~~~~-   88 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP--------YPTNSQIIMGDVLNH-----AALKQAMQG-   88 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS--------CCTTEEEEECCTTCH-----HHHHHHHTT-
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc--------ccCCcEEEEecCCCH-----HHHHHHhcC-
Confidence            5899999999999999999999999 8999999998765431        133578899999975     345555554 


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch-----
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS-----  206 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~-----  206 (255)
                       +|+||||||...          .              ...++.+++.|++++.++||++||..++.  +.+...     
T Consensus        89 -~D~vv~~a~~~~----------~--------------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~--~~~~~~~~~~~  141 (236)
T 3qvo_A           89 -QDIVYANLTGED----------L--------------DIQANSVIAAMKACDVKRLIFVLSLGIYD--EVPGKFVEWNN  141 (236)
T ss_dssp             -CSEEEEECCSTT----------H--------------HHHHHHHHHHHHHTTCCEEEEECCCCC---------------
T ss_pred             -CCEEEEcCCCCc----------h--------------hHHHHHHHHHHHHcCCCEEEEEecceecC--CCCcccccchh
Confidence             569999998521          0              02356788888888888999999988766  222211     


Q ss_pred             ----hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          207 ----VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       207 ----~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                          .+...+.+       ...++.+.|+++++|+||++.++....
T Consensus       142 ~~~~~~~~~~~~-------~~~~l~~~gi~~~~vrPg~i~~~~~~~  180 (236)
T 3qvo_A          142 AVIGEPLKPFRR-------AADAIEASGLEYTILRPAWLTDEDIID  180 (236)
T ss_dssp             ---CGGGHHHHH-------HHHHHHTSCSEEEEEEECEEECCSCCC
T ss_pred             hcccchHHHHHH-------HHHHHHHCCCCEEEEeCCcccCCCCcc
Confidence                11112211       123345679999999999999986543

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.80  E-value=1.7e-19  Score=156.72  Aligned_cols=174  Identities=13%  Similarity=0.099  Sum_probs=123.8

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHH--cCCcEEEEeCChhhHHHHHH------HHHhhcCCceEEEEEEECCCCcHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAK--TGLNLVLVGRNPDKLKDVSD------SIQAKYAKTQIKSVVVDFSGDLDEG  120 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~--~G~~V~l~~r~~~~~~~~~~------~~~~~~~~~~~~~~~~d~~~~~~~~  120 (255)
                      +++++++|+||||+|+||++++++|++  +|++|++++|+........+      .... .....+..+.+|++|.  +.
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~--~~   82 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKN-LIGFKGEVIAADINNP--LD   82 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGG-GTTCCSEEEECCTTCH--HH
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhh-ccccCceEEECCCCCH--HH
Confidence            456799999999999999999999999  99999999997652111000      0001 1133567889999975  33


Q ss_pred             HHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC
Q 025260          121 VERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP  200 (255)
Q Consensus       121 ~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~  200 (255)
                      ++++  ...  ++|+||||||....        +.++++..+++|+.++.++++++..    . ++++|++||...+...
T Consensus        83 ~~~~--~~~--~~D~vih~A~~~~~--------~~~~~~~~~~~Nv~gt~~ll~aa~~----~-~~~~V~~SS~~vyg~~  145 (362)
T 3sxp_A           83 LRRL--EKL--HFDYLFHQAAVSDT--------TMLNQELVMKTNYQAFLNLLEIARS----K-KAKVIYASSAGVYGNT  145 (362)
T ss_dssp             HHHH--TTS--CCSEEEECCCCCGG--------GCCCHHHHHHHHTHHHHHHHHHHHH----T-TCEEEEEEEGGGGCSC
T ss_pred             HHHh--hcc--CCCEEEECCccCCc--------cccCHHHHHHHHHHHHHHHHHHHHH----c-CCcEEEeCcHHHhCCC
Confidence            3333  123  57799999996421        2344678899999999999999743    3 3569999996655421


Q ss_pred             CC--------CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          201 SD--------PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       201 ~~--------~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      ..        .+...|+.||++.+.+++.++.+     +++..++|+.+-.|...
T Consensus       146 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~  195 (362)
T 3sxp_A          146 KAPNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREF  195 (362)
T ss_dssp             CSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCG
T ss_pred             CCCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCC
Confidence            11        12456999999999999988766     68888999888876543

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.79  E-value=6.6e-19  Score=165.60  Aligned_cols=178  Identities=17%  Similarity=0.148  Sum_probs=126.6

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.....+..+++.... ...+..+.+|+++.  +.++++.+.  
T Consensus         8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~v~~v~~Dl~d~--~~l~~~~~~--   82 (699)
T 1z45_A            8 ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT-KHHIPFYEVDLCDR--KGLEKVFKE--   82 (699)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH-TSCCCEEECCTTCH--HHHHHHHHH--
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc-CCceEEEEcCCCCH--HHHHHHHHh--
Confidence            3568999999999999999999999999999999997654333333333221 23466788999874  333333332  


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC---------
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------  200 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~---------  200 (255)
                       .++|+||||||....  ..    ..+..++.+++|+.++.++++++.    +.+.+++|++||.+.+...         
T Consensus        83 -~~~D~Vih~A~~~~~--~~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~~iV~~SS~~vyg~~~~~~~~~~~  151 (699)
T 1z45_A           83 -YKIDSVIHFAGLKAV--GE----STQIPLRYYHNNILGTVVLLELMQ----QYNVSKFVFSSSATVYGDATRFPNMIPI  151 (699)
T ss_dssp             -SCCCEEEECCSCCCH--HH----HHHSHHHHHHHHHHHHHHHHHHHH----HHTCCEEEEEEEGGGGCCGGGSTTCCSB
T ss_pred             -CCCCEEEECCcccCc--Cc----cccCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEECcHHHhCCCccccccCCc
Confidence             256799999997532  11    122235678999999999887653    3455799999997754310         


Q ss_pred             ----CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          201 ----SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       201 ----~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                          +......|+.||++.+.+++.++.+. ..|+++..++|+.+-.+
T Consensus       152 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~  198 (699)
T 1z45_A          152 PEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGA  198 (699)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECC
T ss_pred             cccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCC
Confidence                11134689999999999999998875 35899999999888765

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.79  E-value=3.5e-20  Score=149.21  Aligned_cols=152  Identities=11%  Similarity=0.043  Sum_probs=116.8

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      .+++++||||+|+||++++++|+++|+  +|++++|++++          .  ...+..+.+|++|.     +.+.+.+ 
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~--~~~~~~~~~D~~~~-----~~~~~~~-   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------E--HPRLDNPVGPLAEL-----LPQLDGS-   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------C--CTTEECCBSCHHHH-----GGGCCSC-
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------c--CCCceEEeccccCH-----HHHHHhh-
Confidence            368899999999999999999999998  99999998765          0  23456666776642     1222222 


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhch
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA  209 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~  209 (255)
                         +|++|||||....        +.+++++.+++|+.++..+++++.+    .+.+++|++||.....    +....|+
T Consensus        66 ---~d~vi~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~----~~~~~y~  126 (215)
T 2a35_A           66 ---IDTAFCCLGTTIK--------EAGSEEAFRAVDFDLPLAVGKRALE----MGARHYLVVSALGADA----KSSIFYN  126 (215)
T ss_dssp             ---CSEEEECCCCCHH--------HHSSHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCT----TCSSHHH
T ss_pred             ---hcEEEECeeeccc--------cCCCHHHHHHhhHHHHHHHHHHHHH----cCCCEEEEECCcccCC----CCccHHH
Confidence               6799999997521        1234677889999999999998654    4557899999987765    2346899


Q ss_pred             HHHHHHHHHHHHHHHHHccCCce-EEEeeeeeeeeCCcc
Q 025260          210 ATKAYIDQFSRSLYVEYRKSGID-VQCQVLFLLCFYNLN  247 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~~gi~-v~~v~Pg~v~T~~~~  247 (255)
                      .+|++++.+.+.       .|++ ++.++||++.+|..+
T Consensus       127 ~sK~~~e~~~~~-------~~~~~~~~vrp~~v~g~~~~  158 (215)
T 2a35_A          127 RVKGELEQALQE-------QGWPQLTIARPSLLFGPREE  158 (215)
T ss_dssp             HHHHHHHHHHTT-------SCCSEEEEEECCSEESTTSC
T ss_pred             HHHHHHHHHHHH-------cCCCeEEEEeCceeeCCCCc
Confidence            999999988764       3898 999999999988643

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.79  E-value=2.4e-19  Score=152.24  Aligned_cols=164  Identities=15%  Similarity=0.063  Sum_probs=123.9

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHc--CCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKT--GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~--G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      +++++||||+|+||.+++++|+++  |++|++++|+....+     +..     .+..+.+|++|.  +   .+.+.+..
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~-----~~~~~~~D~~d~--~---~~~~~~~~   66 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VVN-----SGPFEVVNALDF--N---QIEHLVEV   66 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HHH-----SSCEEECCTTCH--H---HHHHHHHH
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----ccC-----CCceEEecCCCH--H---HHHHHHhh
Confidence            477999999999999999999999  899999999876521     111     235678898874  3   33333332


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCC---------
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS---------  201 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~---------  201 (255)
                      .++|++||+||....    .   ..+++++.+++|+.++.++++++.+    .+.+++|++||...+....         
T Consensus        67 ~~~d~vih~a~~~~~----~---~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~  135 (312)
T 2yy7_A           67 HKITDIYLMAALLSA----T---AEKNPAFAWDLNMNSLFHVLNLAKA----KKIKKIFWPSSIAVFGPTTPKENTPQYT  135 (312)
T ss_dssp             TTCCEEEECCCCCHH----H---HHHCHHHHHHHHHHHHHHHHHHHHT----TSCSEEECCEEGGGCCTTSCSSSBCSSC
T ss_pred             cCCCEEEECCccCCC----c---hhhChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHHhCCCCCCCCccccC
Confidence            356799999997522    0   1244678899999999999998754    3456899999987654211         


Q ss_pred             -CCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          202 -DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       202 -~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                       ......|+.||.+.+.+++.++.++   |++++.++|+.+-.|.
T Consensus       136 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~  177 (312)
T 2yy7_A          136 IMEPSTVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWS  177 (312)
T ss_dssp             BCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSS
T ss_pred             cCCCCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCC
Confidence             1225689999999999999998776   8999999999998854

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.79  E-value=5.7e-19  Score=150.35  Aligned_cols=153  Identities=15%  Similarity=0.129  Sum_probs=89.8

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      +|+++||||+|+||++++++|+++|++|++++|+.+.            ++    .+.+|++|.  +.++++.+..   +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~~----~~~~Dl~d~--~~~~~~~~~~---~   60 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------------PK----FEQVNLLDS--NAVHHIIHDF---Q   60 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------------------------CHHHHHHH---C
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------------CC----eEEecCCCH--HHHHHHHHhh---C
Confidence            6889999999999999999999999999999987543            01    566787764  2222222211   4


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC--------CCCC
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP--------SDPL  204 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~--------~~~~  204 (255)
                      +|++|||||....      +.+.+++++.+++|+.++.++++++.+.    + +++|++||...+...        +..+
T Consensus        61 ~d~vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~~~~~~~~~E~~~~~~  129 (315)
T 2ydy_A           61 PHVIVHCAAERRP------DVVENQPDAASQLNVDASGNLAKEAAAV----G-AFLIYISSDYVFDGTNPPYREEDIPAP  129 (315)
T ss_dssp             CSEEEECC-------------------------CHHHHHHHHHHHHH----T-CEEEEEEEGGGSCSSSCSBCTTSCCCC
T ss_pred             CCEEEECCcccCh------hhhhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchHHHcCCCCCCCCCCCCCCC
Confidence            6799999997532      2245667889999999999999998762    2 589999998866520        1234


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                      ...|+.||++.+.+++.++.       .+..++|+.+-.+
T Consensus       130 ~~~Y~~sK~~~e~~~~~~~~-------~~~~lR~~~v~G~  162 (315)
T 2ydy_A          130 LNLYGKTKLDGEKAVLENNL-------GAAVLRIPILYGE  162 (315)
T ss_dssp             CSHHHHHHHHHHHHHHHHCT-------TCEEEEECSEECS
T ss_pred             cCHHHHHHHHHHHHHHHhCC-------CeEEEeeeeeeCC
Confidence            57899999999999988742       3456666666544

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.78  E-value=7.8e-19  Score=152.93  Aligned_cols=168  Identities=15%  Similarity=0.174  Sum_probs=126.4

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHc-CCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECC-CCcHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS-GDLDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~-G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~~~  128 (255)
                      .++++|+||||+|+||.+++++|+++ |++|++++|+.++.++..+       ...+..+.+|++ |.  +.   +.+.+
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-------~~~v~~~~~Dl~~d~--~~---~~~~~   89 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-------HERMHFFEGDITINK--EW---VEYHV   89 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-------STTEEEEECCTTTCH--HH---HHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-------CCCeEEEeCccCCCH--HH---HHHHh
Confidence            55899999999999999999999998 9999999998765443211       246888999998 53  33   33333


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC------
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD------  202 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~------  202 (255)
                      .  ++|++||+||.....      ...++.++.+++|+.++.++++++..    .+ +++|++||...+.....      
T Consensus        90 ~--~~d~Vih~A~~~~~~------~~~~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~v~~SS~~vyg~~~~~~~~e~  156 (372)
T 3slg_A           90 K--KCDVILPLVAIATPA------TYVKQPLRVFELDFEANLPIVRSAVK----YG-KHLVFPSTSEVYGMCADEQFDPD  156 (372)
T ss_dssp             H--HCSEEEECBCCCCHH------HHHHCHHHHHHHHTTTTHHHHHHHHH----HT-CEEEEECCGGGGBSCCCSSBCTT
T ss_pred             c--cCCEEEEcCccccHH------HHhhCHHHHHHHHHHHHHHHHHHHHH----hC-CcEEEeCcHHHhCCCCCCCCCcc
Confidence            3  356999999986431      12344567889999999999888754    34 78999999765442110      


Q ss_pred             ----------CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          203 ----------PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       203 ----------~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                                .....|+.||.+.+.+.+.++.+    |++++.++|+.+-.|..+
T Consensus       157 ~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~  207 (372)
T 3slg_A          157 ASALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLD  207 (372)
T ss_dssp             TCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCC
T ss_pred             ccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcc
Confidence                      22347999999999999988866    899999999999887643

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.78  E-value=3.2e-18  Score=138.17  Aligned_cols=150  Identities=15%  Similarity=0.142  Sum_probs=106.8

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG  134 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id  134 (255)
                      .++||||+|+||++++++|+++|++|++++|+++++++..         ..+..+.+|++|...       +.+++  +|
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---------~~~~~~~~D~~d~~~-------~~~~~--~d   63 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH---------KDINILQKDIFDLTL-------SDLSD--QN   63 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC---------SSSEEEECCGGGCCH-------HHHTT--CS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc---------CCCeEEeccccChhh-------hhhcC--CC
Confidence            5899999999999999999999999999999987655431         346788899987622       45554  56


Q ss_pred             EEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC----------CC
Q 025260          135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD----------PL  204 (255)
Q Consensus       135 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~----------~~  204 (255)
                      ++|||||....               ..++|+.++    +.+++.+++.+.+++|++||..+....+.          ..
T Consensus        64 ~vi~~ag~~~~---------------~~~~~~~~~----~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~  124 (221)
T 3ew7_A           64 VVVDAYGISPD---------------EAEKHVTSL----DHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLRE  124 (221)
T ss_dssp             EEEECCCSSTT---------------TTTSHHHHH----HHHHHHHCSCCSSEEEEECCCC-------------------
T ss_pred             EEEECCcCCcc---------------ccchHHHHH----HHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCC
Confidence            99999998421               123455555    45555566666789999999877652111          12


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                      ...|+.+|.+.+.+ +.++.  ...|++++.++||.+.+|
T Consensus       125 ~~~y~~~k~~~e~~-~~~~~--~~~gi~~~ivrp~~v~g~  161 (221)
T 3ew7_A          125 APYYPTARAQAKQL-EHLKS--HQAEFSWTYISPSAMFEP  161 (221)
T ss_dssp             CCCSCCHHHHHHHH-HHHHT--TTTTSCEEEEECSSCCCC
T ss_pred             HHHHHHHHHHHHHH-HHHHh--hccCccEEEEeCcceecC
Confidence            45699999999886 33332  156899999999999886

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.77  E-value=1.1e-18  Score=151.18  Aligned_cols=169  Identities=17%  Similarity=0.129  Sum_probs=119.4

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcC-CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G-~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      +++++++||||+|+||.+++++|+++| ++|++++|+.....  .+.+    ....   +.+|+++.  +.++.+.+...
T Consensus        44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~----~~~~---~~~d~~~~--~~~~~~~~~~~  112 (357)
T 2x6t_A           44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNL----VDLN---IADYMDKE--DFLIQIMAGEE  112 (357)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGT----TTSC---CSEEEEHH--HHHHHHHTTCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhcc----cCce---EeeecCcH--HHHHHHHhhcc
Confidence            457899999999999999999999999 89999999865421  0111    1122   45666653  33333332100


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC-------
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD-------  202 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~-------  202 (255)
                      ..++|++||+||....        +.+++++.+++|+.++.++++++.+    .+. ++|++||...+...+.       
T Consensus       113 ~~~~d~Vih~A~~~~~--------~~~~~~~~~~~n~~~~~~ll~a~~~----~~~-r~V~~SS~~v~g~~~~~~~~E~~  179 (357)
T 2x6t_A          113 FGDVEAIFHEGACSST--------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIESRE  179 (357)
T ss_dssp             CSSCCEEEECCSCCCT--------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGCSCSSCCCSSGG
T ss_pred             cCCCCEEEECCcccCC--------ccCCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEcchHHhCCCCCCCcCCcC
Confidence            0147799999997532        1223578899999999999999876    234 8999999876542111       


Q ss_pred             --CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          203 --PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       203 --~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                        .....|+.||++.+.+++.++.++   |++++.++|+.+.+|..
T Consensus       180 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~Gp~~  222 (357)
T 2x6t_A          180 YEKPLNVFGYSKFLFDEYVRQILPEA---NSQIVGFRYFNVYGPRE  222 (357)
T ss_dssp             GCCCSSHHHHHHHHHHHHHHHHGGGC---SSCEEEEEECEEESSSC
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEecCeEECCCC
Confidence              125689999999999999988763   89999999999998864

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.77  E-value=8.1e-18  Score=151.61  Aligned_cols=174  Identities=14%  Similarity=0.103  Sum_probs=126.6

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHc---CCcEEEEeCChhhHHHHHHHHHhhcC--------------CceEEEEEEEC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKT---GLNLVLVGRNPDKLKDVSDSIQAKYA--------------KTQIKSVVVDF  113 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~---G~~V~l~~r~~~~~~~~~~~~~~~~~--------------~~~~~~~~~d~  113 (255)
                      .++|+|+||||+|+||.+++++|+++   |++|++++|+.+... ..+++.+...              ..++.++.+|+
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl  149 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDED-ARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK  149 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHH-HHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHH-HHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence            56899999999999999999999999   999999999876542 2333332221              25789999999


Q ss_pred             CCCcH-HHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEEC
Q 025260          114 SGDLD-EGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIG  192 (255)
Q Consensus       114 ~~~~~-~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vs  192 (255)
                      ++..- -..+.+.+.+.  ++|++|||||....          +.+++.+++|+.++.++++++..    .+.+++|++|
T Consensus       150 ~~~~~gld~~~~~~~~~--~~D~Vih~Aa~~~~----------~~~~~~~~~Nv~gt~~ll~aa~~----~~~~~~V~iS  213 (478)
T 4dqv_A          150 SEPDLGLDQPMWRRLAE--TVDLIVDSAAMVNA----------FPYHELFGPNVAGTAELIRIALT----TKLKPFTYVS  213 (478)
T ss_dssp             TSGGGGCCHHHHHHHHH--HCCEEEECCSSCSB----------SSCCEEHHHHHHHHHHHHHHHTS----SSCCCEEEEE
T ss_pred             CCcccCCCHHHHHHHHc--CCCEEEECccccCC----------cCHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEe
Confidence            85310 01123333344  35699999998532          12356789999999999998754    3445899999


Q ss_pred             CccccccCCC--------------------CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          193 SGAAIVIPSD--------------------PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       193 S~~~~~~~~~--------------------~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                      |...+.....                    .....|+.||.+.+.+.+.++.+.   |++++.++||.|-.+
T Consensus       214 S~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~  282 (478)
T 4dqv_A          214 TADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILAD  282 (478)
T ss_dssp             EGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECC
T ss_pred             ehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCC
Confidence            9765431100                    001349999999999999998765   899999999999875

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.77  E-value=1.7e-18  Score=149.20  Aligned_cols=167  Identities=14%  Similarity=0.098  Sum_probs=123.1

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .++++++||||+|+||++++++|+++|++|++++|+.....+..+++   .....+..+.+|+.+..          +. 
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~----------~~-   90 (343)
T 2b69_A           25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW---IGHENFELINHDVVEPL----------YI-   90 (343)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG---TTCTTEEEEECCTTSCC----------CC-
T ss_pred             cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhh---ccCCceEEEeCccCChh----------hc-
Confidence            56899999999999999999999999999999999754322111111   11345778888988651          23 


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC----------
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP----------  200 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~----------  200 (255)
                       ++|++||+||.....  ..    .+++++.+++|+.++.++++++..    .+ .++|++||...+...          
T Consensus        91 -~~d~vih~A~~~~~~--~~----~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~v~g~~~~~~~~E~~~  158 (343)
T 2b69_A           91 -EVDQIYHLASPASPP--NY----MYNPIKTLKTNTIGTLNMLGLAKR----VG-ARLLLASTSEVYGDPEVHPQSEDYW  158 (343)
T ss_dssp             -CCSEEEECCSCCSHH--HH----TTCHHHHHHHHHHHHHHHHHHHHH----HT-CEEEEEEEGGGGBSCSSSSBCTTCC
T ss_pred             -CCCEEEECccccCch--hh----hhCHHHHHHHHHHHHHHHHHHHHH----hC-CcEEEECcHHHhCCCCCCCCccccc
Confidence             467999999975321  11    123467889999999999998765    23 489999997655311          


Q ss_pred             ----CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          201 ----SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       201 ----~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                          +......|+.||++.+.+++.++.+.   |++++.++||.+.+|..
T Consensus       159 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~  205 (343)
T 2b69_A          159 GHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRM  205 (343)
T ss_dssp             CBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTC
T ss_pred             ccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCC
Confidence                12235679999999999999998775   89999999999998864

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.77  E-value=2.3e-18  Score=146.58  Aligned_cols=156  Identities=20%  Similarity=0.239  Sum_probs=117.1

Q ss_pred             EEEECCCCchHHHHHHHHHHc--CCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           56 ALVTGPTDGIGKSFAFQLAKT--GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~--G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      ++||||+|+||++++++|+++  |++|++++|+....+             .+..+.+|++|.  +.+++   .+...++
T Consensus         2 vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-------------~~~~~~~D~~d~--~~~~~---~~~~~~~   63 (317)
T 3ajr_A            2 ILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-------------GIKFITLDVSNR--DEIDR---AVEKYSI   63 (317)
T ss_dssp             EEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-------------TCCEEECCTTCH--HHHHH---HHHHTTC
T ss_pred             EEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-------------CceEEEecCCCH--HHHHH---HHhhcCC
Confidence            899999999999999999998  899999998765321             235678898874  33333   3332357


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCC----------CC
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS----------DP  203 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~----------~~  203 (255)
                      |++||+||....       .+.++++..+++|+.++.++++++.+    .+.+++|++||...+....          ..
T Consensus        64 d~vih~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~  132 (317)
T 3ajr_A           64 DAIFHLAGILSA-------KGEKDPALAYKVNMNGTYNILEAAKQ----HRVEKVVIPSTIGVFGPETPKNKVPSITITR  132 (317)
T ss_dssp             CEEEECCCCCHH-------HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCTTSCSSSBCSSSCCC
T ss_pred             cEEEECCcccCC-------ccccChHHHhhhhhHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCCCCCCccccccCC
Confidence            799999997421       12344678899999999999998754    4457999999987765210          11


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeee
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCF  243 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T  243 (255)
                      +...|+.||++.+.+++.++.+.   |++++.++|+.+-.
T Consensus       133 p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~~~g  169 (317)
T 3ajr_A          133 PRTMFGVTKIAAELLGQYYYEKF---GLDVRSLRYPGIIS  169 (317)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEEC
T ss_pred             CCchHHHHHHHHHHHHHHHHHhc---CCeEEEEecCcEec
Confidence            35789999999999999988765   89999998665554

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.76  E-value=5.6e-18  Score=144.47  Aligned_cols=156  Identities=13%  Similarity=0.103  Sum_probs=117.5

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      +++++||||+|+||++++++|+++|++|++++|+.                      .+|++|.  +.+++   .+...+
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------------~~D~~d~--~~~~~---~~~~~~   55 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDS--RAVHD---FFASER   55 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCH--HHHHH---HHHHHC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------------cCCccCH--HHHHH---HHHhcC
Confidence            57899999999999999999999999999988762                      1477653  33333   333124


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc-------------
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI-------------  199 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~-------------  199 (255)
                      +|++||+||....     .....++.++.+++|+.++.++++++..    .+.+++|++||...+..             
T Consensus        56 ~d~vih~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~  126 (321)
T 1e6u_A           56 IDQVYLAAAKVGG-----IVANNTYPADFIYQNMMIESNIIHAAHQ----NDVNKLLFLGSSCIYPKLAKQPMAESELLQ  126 (321)
T ss_dssp             CSEEEECCCCCCC-----HHHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGSCTTCCSSBCGGGTTS
T ss_pred             CCEEEEcCeecCC-----cchhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEccHHHcCCCCCCCcCcccccc
Confidence            6699999997531     0112344577899999999999988755    34468999999876542             


Q ss_pred             -CCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          200 -PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       200 -~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                       +..|....|+.||.+.+.+++.++.+.   |++++.++|+.+-.|...
T Consensus       127 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~  172 (321)
T 1e6u_A          127 GTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDN  172 (321)
T ss_dssp             SCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCC
T ss_pred             CCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCCC
Confidence             112223589999999999999998776   899999999999987653

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.75  E-value=1.9e-17  Score=140.79  Aligned_cols=159  Identities=14%  Similarity=0.080  Sum_probs=121.1

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      +++++||||+|+||++++++|+++|++|++++|+....+  .+         .+..+.+|++ .     +.+.+.+.  +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~---------~~~~~~~Dl~-~-----~~~~~~~~--~   62 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--IN---------DYEYRVSDYT-L-----EDLINQLN--D   62 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------------CCEEEECCCC-H-----HHHHHHTT--T
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--CC---------ceEEEEcccc-H-----HHHHHhhc--C
Confidence            478999999999999999999999999999999943322  11         4567888887 4     44555555  5


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC---------CCC
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDP  203 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~---------~~~  203 (255)
                      +|++||+||.....          +.++.+++|+.++.++++++..    .+-+++|++||...+..+         +..
T Consensus        63 ~d~Vih~a~~~~~~----------~~~~~~~~n~~~~~~ll~a~~~----~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~  128 (311)
T 3m2p_A           63 VDAVVHLAATRGSQ----------GKISEFHDNEILTQNLYDACYE----NNISNIVYASTISAYSDETSLPWNEKELPL  128 (311)
T ss_dssp             CSEEEECCCCCCSS----------SCGGGTHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCCGGGCSBCTTSCCC
T ss_pred             CCEEEEccccCCCC----------ChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEccHHHhCCCCCCCCCCCCCCC
Confidence            66999999986431          2466789999999998888643    455689999997665421         111


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      ....|+.+|.+.+.+.+.++.+   .|++++.++|+.+-.|...
T Consensus       129 p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~  169 (311)
T 3m2p_A          129 PDLMYGVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEK  169 (311)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC-
T ss_pred             CCchhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCC
Confidence            2468999999999999998876   4899999999999987654

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.75  E-value=1.3e-17  Score=155.81  Aligned_cols=170  Identities=15%  Similarity=0.140  Sum_probs=127.3

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHc-CCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~-G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      .++++++||||+|+||.+++++|+++ |++|++++|+.++.++..       ....+..+.+|++|. ++.++   +.+.
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~-------~~~~v~~v~~Dl~d~-~~~~~---~~~~  381 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIH-SEWIE---YHVK  381 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT-------TCTTEEEEECCTTTC-HHHHH---HHHH
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc-------cCCceEEEECCCCCc-HHHHH---Hhhc
Confidence            35789999999999999999999998 899999999876543211       134578889999875 12222   2333


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC-------
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD-------  202 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~-------  202 (255)
                        ++|++|||||.....      ...+++++.+++|+.++.++++++..    .+ +++|++||...+.....       
T Consensus       382 --~~D~Vih~Aa~~~~~------~~~~~~~~~~~~Nv~gt~~ll~aa~~----~~-~r~V~~SS~~vyg~~~~~~~~E~~  448 (660)
T 1z7e_A          382 --KCDVVLPLVAIATPI------EYTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDEDH  448 (660)
T ss_dssp             --HCSEEEECCCCCCTH------HHHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCSSSBCTTT
T ss_pred             --CCCEEEECceecCcc------ccccCHHHHHHhhhHHHHHHHHHHHH----hC-CEEEEEecHHHcCCCCCcccCCCc
Confidence              356999999975421      11234677899999999999988755    34 79999999776542110       


Q ss_pred             ---------CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          203 ---------PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       203 ---------~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                               .....|+.||.+.+.+++.++.+.   |++++.++||.+.+|..+
T Consensus       449 ~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~  499 (660)
T 1z7e_A          449 SNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLD  499 (660)
T ss_dssp             CCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSS
T ss_pred             cccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCcc
Confidence                     123379999999999999998876   899999999999988653

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.74  E-value=2.9e-18  Score=144.46  Aligned_cols=146  Identities=17%  Similarity=0.123  Sum_probs=110.4

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      .++++||||+|+||++++++|+++|++|++++|+                       .+|++|.  +.++++.+..   +
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~Dl~d~--~~~~~~~~~~---~   63 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNV--LAVNKFFNEK---K   63 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCH--HHHHHHHHHH---C
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-----------------------cCCCCCH--HHHHHHHHhc---C
Confidence            5899999999999999999999999999999996                       1577664  3333332222   4


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCC---------CC
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS---------DP  203 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~---------~~  203 (255)
                      +|++|||||....      +.+.+++++.+++|+.++.++++++.+    .+ .++|++||...+....         ..
T Consensus        64 ~d~vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~----~~-~~iv~~SS~~v~~~~~~~~~~E~~~~~  132 (292)
T 1vl0_A           64 PNVVINCAAHTAV------DKCEEQYDLAYKINAIGPKNLAAAAYS----VG-AEIVQISTDYVFDGEAKEPITEFDEVN  132 (292)
T ss_dssp             CSEEEECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHH----HT-CEEEEEEEGGGSCSCCSSCBCTTSCCC
T ss_pred             CCEEEECCccCCH------HHHhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEechHHeECCCCCCCCCCCCCCC
Confidence            6699999997532      223456788999999999999999866    23 3899999987654211         11


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                      ....|+.||++.+.+++.++.       .+..++|+.+..|
T Consensus       133 ~~~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~  166 (292)
T 1vl0_A          133 PQSAYGKTKLEGENFVKALNP-------KYYIVRTAWLYGD  166 (292)
T ss_dssp             CCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEESS
T ss_pred             CccHHHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC
Confidence            356899999999998887642       4788899988865

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.73  E-value=1.2e-17  Score=141.62  Aligned_cols=163  Identities=16%  Similarity=0.148  Sum_probs=118.0

Q ss_pred             EEEEECCCCchHHHHHHHHHHcC-CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC---
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG---  130 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G-~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~---  130 (255)
                      +++||||+|+||++++++|+++| ++|++++|+.....  .+.+.    ...   +.+|+++.  +.++   +.+.+   
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~----~~~---~~~d~~~~--~~~~---~~~~~~~~   66 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV----DLN---IADYMDKE--DFLI---QIMAGEEF   66 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH----TSC---CSEEEEHH--HHHH---HHHTTCCC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC----cce---eccccccH--HHHH---HHHhcccc
Confidence            38999999999999999999999 89999999865421  11111    112   45666543  2333   33332   


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC--------
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD--------  202 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~--------  202 (255)
                      .++|++||+||....        +.+++++.+++|+.++.++++++.+.    +. ++|++||...+.....        
T Consensus        67 ~~~d~vi~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~a~~~~----~~-~~v~~SS~~v~g~~~~~~~~E~~~  133 (310)
T 1eq2_A           67 GDVEAIFHEGACSST--------TEWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAATYGGRTSDFIESREY  133 (310)
T ss_dssp             SSCCEEEECCSCCCT--------TCCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGGTTCCSCBCSSGGG
T ss_pred             CCCcEEEECcccccC--------cccCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEeeHHHhCCCCCCCCCCCCC
Confidence            147799999997532        12235778999999999999987652    34 8999999876542111        


Q ss_pred             -CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          203 -PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       203 -~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                       .....|+.||.+.+.+.+.++.+   .|++++.++||.+-+|...
T Consensus       134 ~~p~~~Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~  176 (310)
T 1eq2_A          134 EKPLNVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREG  176 (310)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCG
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCC
Confidence             12568999999999999998866   4899999999999988643

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.73  E-value=9.3e-18  Score=142.23  Aligned_cols=162  Identities=15%  Similarity=0.081  Sum_probs=115.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      .+++++++||||+|+||++++++|+++|+      +...             ....+..+.+|++|.  +   .+.+.+.
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~-------------~~~~~~~~~~D~~d~--~---~~~~~~~   58 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE-------------DWVFVSSKDADLTDT--A---QTRALFE   58 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC-------------EEEECCTTTCCTTSH--H---HHHHHHH
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc-------------cccccCceecccCCH--H---HHHHHHh
Confidence            35589999999999999999999999997      1100             011222335677764  3   3333444


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc----------
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI----------  199 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~----------  199 (255)
                      +.++|++||+||.....     ..+.++.++.+++|+.++.++++++..    .+-+++|++||...+..          
T Consensus        59 ~~~~d~Vih~A~~~~~~-----~~~~~~~~~~~~~nv~gt~~ll~a~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~  129 (319)
T 4b8w_A           59 KVQPTHVIHLAAMVGGL-----FRNIKYNLDFWRKNVHMNDNVLHSAFE----VGARKVVSCLSTCIFPDKTTYPIDETM  129 (319)
T ss_dssp             HSCCSEEEECCCCCCCH-----HHHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEECCGGGSCSSCCSSBCGGG
T ss_pred             hcCCCEEEECceecccc-----cccccCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEEcchhhcCCCCCCCccccc
Confidence            33577999999985310     112233467899999999999988644    44568999999876542          


Q ss_pred             ----CCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          200 ----PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       200 ----~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                          ++.|...+|+.||.+.+.+.+.++++.   |++++.++|+.+-.|..+
T Consensus       130 ~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~~  178 (319)
T 4b8w_A          130 IHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHDN  178 (319)
T ss_dssp             GGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCC
T ss_pred             cccCCCCCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCCC
Confidence                122333369999999999999998876   899999999999987643

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.73  E-value=7e-18  Score=140.55  Aligned_cols=134  Identities=16%  Similarity=0.172  Sum_probs=100.6

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG  134 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id  134 (255)
                      +++||||+|+||++++++|++ |++|++++|+++. +          .+     +.+|++|.  +.++++.+..   ++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~-~----------~~-----~~~Dl~~~--~~~~~~~~~~---~~d   59 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEI-Q----------GG-----YKLDLTDF--PRLEDFIIKK---RPD   59 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCC-T----------TC-----EECCTTSH--HHHHHHHHHH---CCS
T ss_pred             EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcC-C----------CC-----ceeccCCH--HHHHHHHHhc---CCC
Confidence            589999999999999999994 8999999998742 0          12     77888874  3333333322   467


Q ss_pred             EEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC--------CCch
Q 025260          135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD--------PLYS  206 (255)
Q Consensus       135 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~--------~~~~  206 (255)
                      ++|||||....      +.+.+++++.+++|+.++.++++++.+    . ++++|++||..++...+.        ....
T Consensus        60 ~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~iv~~SS~~~~~~~~~~~~e~~~~~~~~  128 (273)
T 2ggs_A           60 VIINAAAMTDV------DKCEIEKEKAYKINAEAVRHIVRAGKV----I-DSYIVHISTDYVFDGEKGNYKEEDIPNPIN  128 (273)
T ss_dssp             EEEECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHH----T-TCEEEEEEEGGGSCSSSCSBCTTSCCCCSS
T ss_pred             EEEECCcccCh------hhhhhCHHHHHHHhHHHHHHHHHHHHH----h-CCeEEEEecceeEcCCCCCcCCCCCCCCCC
Confidence            99999997532      223456788999999999999999864    2 359999999887652111        1257


Q ss_pred             hchHHHHHHHHHHHH
Q 025260          207 VYAATKAYIDQFSRS  221 (255)
Q Consensus       207 ~Y~asK~al~~~~~~  221 (255)
                      .|+.||++.+.+++.
T Consensus       129 ~Y~~sK~~~e~~~~~  143 (273)
T 2ggs_A          129 YYGLSKLLGETFALQ  143 (273)
T ss_dssp             HHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHhC
Confidence            899999999998877

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.70  E-value=2.3e-17  Score=139.26  Aligned_cols=150  Identities=16%  Similarity=0.100  Sum_probs=110.3

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG  134 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id  134 (255)
                      +++||||+|+||++++++|+ +|++|++++|+..                   .+.+|++|.  +.   +.+.+.+.++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------------------~~~~D~~d~--~~---~~~~~~~~~~d   56 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------------------EFCGDFSNP--KG---VAETVRKLRPD   56 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------------------SSCCCTTCH--HH---HHHHHHHHCCS
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------------------cccccCCCH--HH---HHHHHHhcCCC
Confidence            69999999999999999999 8999999999751                   235677764  22   33333322467


Q ss_pred             EEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCC---------CCCc
Q 025260          135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS---------DPLY  205 (255)
Q Consensus       135 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~---------~~~~  205 (255)
                      ++||+||....      +.+.+++++.+++|+.++.++++++..    .+ .++|++||...+....         ....
T Consensus        57 ~vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~  125 (299)
T 1n2s_A           57 VIVNAAAHTAV------DKAESEPELAQLLNATSVEAIAKAANE----TG-AWVVHYSTDYVFPGTGDIPWQETDATSPL  125 (299)
T ss_dssp             EEEECCCCCCH------HHHTTCHHHHHHHHTHHHHHHHHHHTT----TT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCS
T ss_pred             EEEECcccCCH------hhhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEecccEEeCCCCCCCCCCCCCCCc
Confidence            99999997532      111233577889999999999998754    22 4899999987654211         1125


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      ..|+.+|.+.+.+.+.++.       +++.++|+.+.+|..+
T Consensus       126 ~~Y~~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~~~  160 (299)
T 1n2s_A          126 NVYGKTKLAGEKALQDNCP-------KHLIFRTSWVYAGKGN  160 (299)
T ss_dssp             SHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSC
T ss_pred             cHHHHHHHHHHHHHHHhCC-------CeEEEeeeeecCCCcC
Confidence            6899999999998877542       7899999999988644

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.70  E-value=2.5e-18  Score=146.34  Aligned_cols=166  Identities=13%  Similarity=0.038  Sum_probs=111.8

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      +.+++++||||+|+||.+++++|+++|++|++++|+........+.      ....    .+ .+.+    +.+...+. 
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~----~~-~~~~----~~~~~Dl~-   68 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEG------TGKF----LE-KPVL----ELEERDLS-   68 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTT------SSEE----EC-SCGG----GCCHHHHT-
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhh------hhhh----cc-CCCe----eEEeCccc-
Confidence            3478999999999999999999999999999999986521000000      0000    00 0110    11111111 


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC---------C
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------S  201 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~---------~  201 (255)
                       ++|++||+||......  ..+    ..+..++ |+.++.++++++..    .+-+++|++||...+...         +
T Consensus        69 -~~d~vi~~a~~~~~~~--~~~----~~~~~~~-n~~~~~~ll~a~~~----~~v~~~v~~SS~~v~~~~~~~~~~E~~~  136 (321)
T 3vps_A           69 -DVRLVYHLASHKSVPR--SFK----QPLDYLD-NVDSGRHLLALCTS----VGVPKVVVGSTCEVYGQADTLPTPEDSP  136 (321)
T ss_dssp             -TEEEEEECCCCCCHHH--HTT----STTTTHH-HHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred             -cCCEEEECCccCChHH--HHh----CHHHHHH-HHHHHHHHHHHHHH----cCCCeEEEecCHHHhCCCCCCCCCCCCC
Confidence             6789999999864210  111    1234556 99999998888754    334689999998765421         1


Q ss_pred             CCCchhchHHHHHHHHHHHHHHHHHccCCc-eEEEeeeeeeeeCCcc
Q 025260          202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGI-DVQCQVLFLLCFYNLN  247 (255)
Q Consensus       202 ~~~~~~Y~asK~al~~~~~~l~~e~~~~gi-~v~~v~Pg~v~T~~~~  247 (255)
                      ......|+.||.+.+.+.+.++.+.   |+ +++.++|+.+-.|...
T Consensus       137 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~ilRp~~v~G~~~~  180 (321)
T 3vps_A          137 LSPRSPYAASKVGLEMVAGAHQRAS---VAPEVGIVRFFNVYGPGER  180 (321)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHSS---SSCEEEEEEECEEECTTCC
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHc---CCCceEEEEeccccCcCCC
Confidence            1225789999999999999988764   88 9999999999987644

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.70  E-value=2e-17  Score=138.98  Aligned_cols=148  Identities=16%  Similarity=0.144  Sum_probs=109.8

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG  134 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id  134 (255)
                      +++||||+|+||++++++|+++|++|++++|.                       .+|++|.  +.++++.+..   ++|
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~D~~d~--~~~~~~~~~~---~~d   58 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK-----------------------LLDITNI--SQVQQVVQEI---RPH   58 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-----------------------TSCTTCH--HHHHHHHHHH---CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-----------------------ccCCCCH--HHHHHHHHhc---CCC
Confidence            79999999999999999999999999999992                       1566654  3333333322   467


Q ss_pred             EEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC---------CCCCc
Q 025260          135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDPLY  205 (255)
Q Consensus       135 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~---------~~~~~  205 (255)
                      ++||+||....      +.+.+++++.+++|+.++.++++++.+.    + .++|++||...+...         +..+.
T Consensus        59 ~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~  127 (287)
T 3sc6_A           59 IIIHCAAYTKV------DQAEKERDLAYVINAIGARNVAVASQLV----G-AKLVYISTDYVFQGDRPEGYDEFHNPAPI  127 (287)
T ss_dssp             EEEECCCCCCH------HHHTTCHHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGSCCCCSSCBCTTSCCCCC
T ss_pred             EEEECCcccCh------HHHhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchhhhcCCCCCCCCCCCCCCCCC
Confidence            99999998642      1112346788999999999999997542    2 479999998765421         11235


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ..|+.+|.+.+.+.+.++.       +.+.++|+.+-.|..+.
T Consensus       128 ~~Y~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~  163 (287)
T 3sc6_A          128 NIYGASKYAGEQFVKELHN-------KYFIVRTSWLYGKYGNN  163 (287)
T ss_dssp             SHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCC
T ss_pred             CHHHHHHHHHHHHHHHhCC-------CcEEEeeeeecCCCCCc
Confidence            6899999999998877643       46899999998875443

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.67  E-value=5.4e-16  Score=140.62  Aligned_cols=169  Identities=17%  Similarity=0.107  Sum_probs=122.2

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhh---HHHHHHHHHhh-------cCCceEEEEEEECCCCcHHHHH
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK---LKDVSDSIQAK-------YAKTQIKSVVVDFSGDLDEGVE  122 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~---~~~~~~~~~~~-------~~~~~~~~~~~d~~~~~~~~~~  122 (255)
                      .++|+||||+|+||.+++++|.++|++|++++|+..+   .+...+.+...       ....++.++.+|+++.  +   
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~--~---  224 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECM--D---  224 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBC--S---
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCccc--c---
Confidence            5899999999999999999999999999999999873   23333333221       1135689999999973  1   


Q ss_pred             HHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc---
Q 025260          123 RIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI---  199 (255)
Q Consensus       123 ~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~---  199 (255)
                      .+. ...  ++|+||||||....         ...++..+++|+.++.++++++.+     +..++|++||... ..   
T Consensus       225 ~l~-~~~--~~D~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~v~iSS~~v-G~~~~  286 (508)
T 4f6l_B          225 DVV-LPE--NMDTIIHAGARTDH---------FGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISV-GTYFD  286 (508)
T ss_dssp             SCC-CSS--CCSEEEECCCC-----------------CCHHHHHHHHHHHHHHHHT-----TTCEEEEEEESCT-TSEEC
T ss_pred             cCC-Ccc--CCCEEEECCceecC---------CCCHHHHhhhHHHHHHHHHHHHHh-----CCCcEEEeCChhh-ccCCc
Confidence            111 223  57799999997531         124577889999999999998765     3478999999776 11   


Q ss_pred             ---------C-----CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          200 ---------P-----SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       200 ---------~-----~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                               .     +......|+.||.+.+.+.+.++.    .|++++.++||.|-.+....
T Consensus       287 ~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~  345 (508)
T 4f6l_B          287 IDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGR  345 (508)
T ss_dssp             TTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSC
T ss_pred             cCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCC
Confidence                     0     011457899999999998887653    59999999999998876543

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.67  E-value=4e-16  Score=130.83  Aligned_cols=145  Identities=19%  Similarity=0.157  Sum_probs=110.5

Q ss_pred             cEEEEECCCCchHHHHHHHHHHc--CCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKT--GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~--G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      |+++||||+|+||++++++|+++  |++|++++|+.++.++..    .    ..+..+.+|++|.     +.+.+.+.+ 
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~----~~~~~~~~D~~d~-----~~l~~~~~~-   66 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D----QGVEVRHGDYNQP-----ESLQKAFAG-   66 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H----TTCEEEECCTTCH-----HHHHHHTTT-
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h----cCCeEEEeccCCH-----HHHHHHHhc-
Confidence            46899999999999999999999  999999999987654332    1    1356788999875     345555554 


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHH
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAAT  211 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~as  211 (255)
                       +|++||+||...         . +      ++|+.++.++++++.    +.+-+++|++||.....   .+  ..|+.+
T Consensus        67 -~d~vi~~a~~~~---------~-~------~~n~~~~~~l~~a~~----~~~~~~~v~~Ss~~~~~---~~--~~y~~~  120 (287)
T 2jl1_A           67 -VSKLLFISGPHY---------D-N------TLLIVQHANVVKAAR----DAGVKHIAYTGYAFAEE---SI--IPLAHV  120 (287)
T ss_dssp             -CSEEEECCCCCS---------C-H------HHHHHHHHHHHHHHH----HTTCSEEEEEEETTGGG---CC--STHHHH
T ss_pred             -CCEEEEcCCCCc---------C-c------hHHHHHHHHHHHHHH----HcCCCEEEEECCCCCCC---CC--CchHHH
Confidence             569999998521         1 1      578888888888764    34557999999987643   12  379999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          212 KAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       212 K~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                      |.+.+.+.+.       .|++++.++||.+.++.
T Consensus       121 K~~~E~~~~~-------~~~~~~ilrp~~~~~~~  147 (287)
T 2jl1_A          121 HLATEYAIRT-------TNIPYTFLRNALYTDFF  147 (287)
T ss_dssp             HHHHHHHHHH-------TTCCEEEEEECCBHHHH
T ss_pred             HHHHHHHHHH-------cCCCeEEEECCEecccc
Confidence            9999988752       58999999999988765

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.66  E-value=6.8e-16  Score=130.42  Aligned_cols=157  Identities=17%  Similarity=0.116  Sum_probs=109.0

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcC-CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G-~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      +|+++||||+|+||++++++|+++| ++|++++|++++...  +.+..    ..+..+.+|+.|.     +.+.+.+.+ 
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~----~~~~~~~~D~~d~-----~~l~~~~~~-   72 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL----QGAEVVQGDQDDQ-----VIMELALNG-   72 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH----TTCEEEECCTTCH-----HHHHHHHTT-
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH----CCCEEEEecCCCH-----HHHHHHHhc-
Confidence            5789999999999999999999999 999999999776431  22222    2356788999875     345555554 


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHH
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAAT  211 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~as  211 (255)
                       +|++|||+|....       ..       .+.|+.++    +.+++.+++.+.++||++|+......+..+....|..+
T Consensus        73 -~d~vi~~a~~~~~-------~~-------~~~~~~~~----~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~s  133 (299)
T 2wm3_A           73 -AYATFIVTNYWES-------CS-------QEQEVKQG----KLLADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDG  133 (299)
T ss_dssp             -CSEEEECCCHHHH-------TC-------HHHHHHHH----HHHHHHHHHHTCSEEEECCCCCHHHHTTTSCCCHHHHH
T ss_pred             -CCEEEEeCCCCcc-------cc-------chHHHHHH----HHHHHHHHHcCCCEEEEEcCccccccCCCcccCchhhH
Confidence             5699999985311       01       22344444    44455455566679999666443221111224679999


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          212 KAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       212 K~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      |.+++.+.+.       .|++++.++||++.+++..
T Consensus       134 K~~~e~~~~~-------~gi~~~ilrp~~~~~~~~~  162 (299)
T 2wm3_A          134 KGEVEEYFRD-------IGVPMTSVRLPCYFENLLS  162 (299)
T ss_dssp             HHHHHHHHHH-------HTCCEEEEECCEEGGGGGT
T ss_pred             HHHHHHHHHH-------CCCCEEEEeecHHhhhchh
Confidence            9999987753       3899999999999988654

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.65  E-value=1.7e-16  Score=133.33  Aligned_cols=154  Identities=11%  Similarity=0.052  Sum_probs=112.1

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      +++++||| +|+||++++++|+++|++|++++|+.+.+            ...+..+.+|++|.     +.+.+.+.+ +
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~~~~~~~Dl~d~-----~~~~~~~~~-~   63 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM------------PAGVQTLIADVTRP-----DTLASIVHL-R   63 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC------------CTTCCEEECCTTCG-----GGCTTGGGG-C
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccCCceEEccCCCh-----HHHHHhhcC-C
Confidence            57899999 59999999999999999999999987652            23466788999875     222223332 4


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC---------CCC
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDP  203 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~---------~~~  203 (255)
                      +|++||+||...           ++.+..+++|+.++.++++++.    +.+.+++|++||...+...         +..
T Consensus        64 ~d~vih~a~~~~-----------~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~  128 (286)
T 3gpi_A           64 PEILVYCVAASE-----------YSDEHYRLSYVEGLRNTLSALE----GAPLQHVFFVSSTGVYGQEVEEWLDEDTPPI  128 (286)
T ss_dssp             CSEEEECHHHHH-----------HC-----CCSHHHHHHHHHHTT----TSCCCEEEEEEEGGGCCCCCSSEECTTSCCC
T ss_pred             CCEEEEeCCCCC-----------CCHHHHHHHHHHHHHHHHHHHh----hCCCCEEEEEcccEEEcCCCCCCCCCCCCCC
Confidence            679999998631           2246678899999999888865    3455799999998765421         111


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ....|+.+|.+.+.+ +..        ++++.++|+.+-.|....+
T Consensus       129 p~~~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~~  165 (286)
T 3gpi_A          129 AKDFSGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLRM  165 (286)
T ss_dssp             CCSHHHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCHH
T ss_pred             CCChhhHHHHHHHHH-Hhc--------CCeEEEecccccCCCchhH
Confidence            356899999998887 432        7999999999998876544

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.62  E-value=7.2e-15  Score=127.30  Aligned_cols=151  Identities=12%  Similarity=0.012  Sum_probs=107.1

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEE-CCCCcHHHHHHHHHHhcCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD-FSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~~~~~~~  131 (255)
                      +++++||||+|+||++++++|+++|++|++++|+.++..  .+++.+   ...+..+.+| ++|.     +.+.+.+.+ 
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~---~~~v~~v~~D~l~d~-----~~l~~~~~~-   73 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA---IPNVTLFQGPLLNNV-----PLMDTLFEG-   73 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT---STTEEEEESCCTTCH-----HHHHHHHTT-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh---cCCcEEEECCccCCH-----HHHHHHHhc-
Confidence            678999999999999999999999999999999987642  122322   2246778899 8875     344555554 


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCcc-ccccCCCCCchhch
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGA-AIVIPSDPLYSVYA  209 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~-~~~~~~~~~~~~Y~  209 (255)
                       +|++|||++....                 +.|..+     +.+++.+++.+ -+++|++||.. +..  +.+....|.
T Consensus        74 -~d~Vi~~a~~~~~-----------------~~~~~~-----~~l~~aa~~~g~v~~~V~~SS~~~~~~--~~~~~~~y~  128 (352)
T 1xgk_A           74 -AHLAFINTTSQAG-----------------DEIAIG-----KDLADAAKRAGTIQHYIYSSMPDHSLY--GPWPAVPMW  128 (352)
T ss_dssp             -CSEEEECCCSTTS-----------------CHHHHH-----HHHHHHHHHHSCCSEEEEEECCCGGGT--SSCCCCTTT
T ss_pred             -CCEEEEcCCCCCc-----------------HHHHHH-----HHHHHHHHHcCCccEEEEeCCcccccc--CCCCCccHH
Confidence             5599999875310                 124333     33444445555 57999999986 333  223346899


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                      .||++.+.+.+.       .|++++.++||++.++..
T Consensus       129 ~sK~~~E~~~~~-------~gi~~~ivrpg~~g~~~~  158 (352)
T 1xgk_A          129 APKFTVENYVRQ-------LGLPSTFVYAGIYNNNFT  158 (352)
T ss_dssp             HHHHHHHHHHHT-------SSSCEEEEEECEEGGGCB
T ss_pred             HHHHHHHHHHHH-------cCCCEEEEecceecCCch
Confidence            999999988765       289999999998865543

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.61  E-value=1.7e-15  Score=126.90  Aligned_cols=142  Identities=20%  Similarity=0.152  Sum_probs=102.3

Q ss_pred             EEEECCCCchHHHHHHHHHHc--CCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           56 ALVTGPTDGIGKSFAFQLAKT--GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~--G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      ++||||+|+||++++++|+++  |++|++++|++++.++..    .    ..+..+.+|++|.     +.+.+.+.+  +
T Consensus         2 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~----~~~~~~~~D~~d~-----~~~~~~~~~--~   66 (286)
T 2zcu_A            2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----A----QGITVRQADYGDE-----AALTSALQG--V   66 (286)
T ss_dssp             EEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----H----TTCEEEECCTTCH-----HHHHHHTTT--C
T ss_pred             EEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----c----CCCeEEEcCCCCH-----HHHHHHHhC--C
Confidence            799999999999999999998  999999999987654322    1    1356788999875     345555554  5


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHHHH
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKA  213 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~asK~  213 (255)
                      |++||+||...       +           .|+.++.++++++    ++.+-+++|++||.....   .+  ..|+.+|.
T Consensus        67 d~vi~~a~~~~-------~-----------~~~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~~---~~--~~y~~sK~  119 (286)
T 2zcu_A           67 EKLLLISSSEV-------G-----------QRAPQHRNVINAA----KAAGVKFIAYTSLLHADT---SP--LGLADEHI  119 (286)
T ss_dssp             SEEEECC--------------------------CHHHHHHHHH----HHHTCCEEEEEEETTTTT---CC--STTHHHHH
T ss_pred             CEEEEeCCCCc-------h-----------HHHHHHHHHHHHH----HHcCCCEEEEECCCCCCC---Cc--chhHHHHH
Confidence            69999998521       0           2555665555554    444557999999987652   12  47999999


Q ss_pred             HHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          214 YIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       214 al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                      +.+.+.+.       .|++++.++||++.+++.
T Consensus       120 ~~e~~~~~-------~~~~~~ilrp~~~~~~~~  145 (286)
T 2zcu_A          120 ETEKMLAD-------SGIVYTLLRNGWYSENYL  145 (286)
T ss_dssp             HHHHHHHH-------HCSEEEEEEECCBHHHHH
T ss_pred             HHHHHHHH-------cCCCeEEEeChHHhhhhH
Confidence            99988753       389999999999877643

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.58  E-value=1.9e-14  Score=121.74  Aligned_cols=150  Identities=21%  Similarity=0.270  Sum_probs=101.9

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh-------hhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHH
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-------DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIK  125 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~-------~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  125 (255)
                      +++++||||+|+||++++++|+++|++|++++|+.       ++.+. .+++..    ..+..+.+|++|.     +.+.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~l~~----~~v~~v~~D~~d~-----~~l~   71 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEEL-IDNYQS----LGVILLEGDINDH-----ETLV   71 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHH-HHHHHH----TTCEEEECCTTCH-----HHHH
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHH-HHHHHh----CCCEEEEeCCCCH-----HHHH
Confidence            56799999999999999999999999999999986       33332 223322    2356788999875     3455


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccc----cC
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIV----IP  200 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~----~~  200 (255)
                      +.+.+  +|++|||||...                     +.+...++++    +++.+ -+++|.  |..+..    .+
T Consensus        72 ~~~~~--~d~vi~~a~~~~---------------------~~~~~~l~~a----a~~~g~v~~~v~--S~~g~~~~~~~~  122 (307)
T 2gas_A           72 KAIKQ--VDIVICAAGRLL---------------------IEDQVKIIKA----IKEAGNVKKFFP--SEFGLDVDRHDA  122 (307)
T ss_dssp             HHHTT--CSEEEECSSSSC---------------------GGGHHHHHHH----HHHHCCCSEEEC--SCCSSCTTSCCC
T ss_pred             HHHhC--CCEEEECCcccc---------------------cccHHHHHHH----HHhcCCceEEee--cccccCcccccC
Confidence            55554  569999998642                     1223334444    44444 467773  444321    11


Q ss_pred             CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          201 SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       201 ~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ..|....| .+|++++.+.+.       .|++++.++||++.+++...+
T Consensus       123 ~~p~~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~  163 (307)
T 2gas_A          123 VEPVRQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNL  163 (307)
T ss_dssp             CTTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGT
T ss_pred             CCcchhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccc
Confidence            23335678 999998876652       379999999999998765543

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.56  E-value=2.2e-14  Score=120.42  Aligned_cols=147  Identities=16%  Similarity=0.126  Sum_probs=101.5

Q ss_pred             EEEEECCCCchHHHHHHHHHHc-CCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~-G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      +++||||+|+||++++++|.++ |++|++++|+.++..+..        ...+..+.+|++|.     +.+.+.+.+  +
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~--------~~~v~~~~~D~~d~-----~~l~~~~~~--~   66 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW--------RGKVSVRQLDYFNQ-----ESMVEAFKG--M   66 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG--------BTTBEEEECCTTCH-----HHHHHHTTT--C
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh--------hCCCEEEEcCCCCH-----HHHHHHHhC--C
Confidence            4899999999999999999998 999999999987643221        23577889999875     455556664  5


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHHHH
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKA  213 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~asK~  213 (255)
                      |++|||||....         .       ..|+.++    +.+++.+++.+-++||++||.....  .    .+|..++.
T Consensus        67 d~vi~~a~~~~~---------~-------~~~~~~~----~~l~~aa~~~gv~~iv~~Ss~~~~~--~----~~~~~~~~  120 (289)
T 3e48_A           67 DTVVFIPSIIHP---------S-------FKRIPEV----ENLVYAAKQSGVAHIIFIGYYADQH--N----NPFHMSPY  120 (289)
T ss_dssp             SEEEECCCCCCS---------H-------HHHHHHH----HHHHHHHHHTTCCEEEEEEESCCST--T----CCSTTHHH
T ss_pred             CEEEEeCCCCcc---------c-------hhhHHHH----HHHHHHHHHcCCCEEEEEcccCCCC--C----CCCccchh
Confidence            699999987532         0       1244444    4445545666667999999965432  1    22333332


Q ss_pred             HHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          214 YIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       214 al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      ..     .+..++...|++++.++||++.+++..
T Consensus       121 ~~-----~~e~~~~~~g~~~~ilrp~~~~~~~~~  149 (289)
T 3e48_A          121 FG-----YASRLLSTSGIDYTYVRMAMYMDPLKP  149 (289)
T ss_dssp             HH-----HHHHHHHHHCCEEEEEEECEESTTHHH
T ss_pred             HH-----HHHHHHHHcCCCEEEEeccccccccHH
Confidence            11     233344456999999999999987654

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.55  E-value=3.2e-14  Score=122.63  Aligned_cols=154  Identities=12%  Similarity=0.080  Sum_probs=105.9

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHH---HHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD---VSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      .++++||||+|+||++++++|+++|++|++++|+.+...+   ..+++.    ...+..+.+|++|.     +.+.+.+.
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~----~~~v~~~~~Dl~d~-----~~l~~~~~   80 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALE----DKGAIIVYGLINEQ-----EAMEKILK   80 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHH----HTTCEEEECCTTCH-----HHHHHHHH
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHH----hCCcEEEEeecCCH-----HHHHHHHh
Confidence            5789999999999999999999999999999998722111   222232    23467889999874     33444444


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCcccccc--CCCCCch
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVI--PSDPLYS  206 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~--~~~~~~~  206 (255)
                      +.++|++||+||..                     |+.++.++++++..    .+ -.++|. |+......  .+.+...
T Consensus        81 ~~~~d~Vi~~a~~~---------------------n~~~~~~l~~aa~~----~g~v~~~v~-S~~g~~~~e~~~~~p~~  134 (346)
T 3i6i_A           81 EHEIDIVVSTVGGE---------------------SILDQIALVKAMKA----VGTIKRFLP-SEFGHDVNRADPVEPGL  134 (346)
T ss_dssp             HTTCCEEEECCCGG---------------------GGGGHHHHHHHHHH----HCCCSEEEC-SCCSSCTTTCCCCTTHH
T ss_pred             hCCCCEEEECCchh---------------------hHHHHHHHHHHHHH----cCCceEEee-cccCCCCCccCcCCCcc
Confidence            23466999999862                     66677777777543    33 456765 44322111  1224467


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      .|..+|.+.+.+.+.       .|++++.++||++-......
T Consensus       135 ~y~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~  169 (346)
T 3i6i_A          135 NMYREKRRVRQLVEE-------SGIPFTYICCNSIASWPYYN  169 (346)
T ss_dssp             HHHHHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSC
T ss_pred             hHHHHHHHHHHHHHH-------cCCCEEEEEecccccccCcc
Confidence            899999998876654       58999999999988765443

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.55  E-value=2e-14  Score=124.97  Aligned_cols=136  Identities=22%  Similarity=0.166  Sum_probs=106.3

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      +|+||||+|+||++++++|+++|+ +|+..+|+                           .|.  +.   +.+.+.  ++
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d~--~~---l~~~~~--~~   47 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TKE--EE---LESALL--KA   47 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CCH--HH---HHHHHH--HC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CCH--HH---HHHHhc--cC
Confidence            699999999999999999999998 99988885                           221  22   222333  35


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCC-cEEEEECCccccccCCCCCchhchHHH
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYSVYAATK  212 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~-g~iv~vsS~~~~~~~~~~~~~~Y~asK  212 (255)
                      |++||+||...+          +..+..+++|+.++.++++++..    .+. .++|++||.....      ...|+.+|
T Consensus        48 d~Vih~a~~~~~----------~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~~v~~Ss~~~~~------~~~Y~~sK  107 (369)
T 3st7_A           48 DFIVHLAGVNRP----------EHDKEFSLGNVSYLDHVLDILTR----NTKKPAILLSSSIQATQ------DNPYGESK  107 (369)
T ss_dssp             SEEEECCCSBCT----------TCSTTCSSSCCBHHHHHHHHHTT----CSSCCEEEEEEEGGGGS------CSHHHHHH
T ss_pred             CEEEECCcCCCC----------CCHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEeCchhhcC------CCCchHHH
Confidence            699999997532          12355688999999999988643    333 4899999977654      46899999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          213 AYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       213 ~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      .+.+.+.+.++++.   |++++.++|+.+-.+..+
T Consensus       108 ~~~E~~~~~~~~~~---g~~~~i~R~~~v~G~~~~  139 (369)
T 3st7_A          108 LQGEQLLREYAEEY---GNTVYIYRWPNLFGKWCK  139 (369)
T ss_dssp             HHHHHHHHHHHHHH---CCCEEEEEECEEECTTCC
T ss_pred             HHHHHHHHHHHHHh---CCCEEEEECCceeCCCCC
Confidence            99999999998876   789999999999887543

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.55  E-value=2.9e-14  Score=129.55  Aligned_cols=156  Identities=12%  Similarity=0.033  Sum_probs=111.5

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      +++|+||||+|+||.+++++|+++|++|++++|+..+.+                .+.+|+.+..       .+.+.  +
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~----------------~v~~d~~~~~-------~~~l~--~  201 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG----------------KRFWDPLNPA-------SDLLD--G  201 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT----------------CEECCTTSCC-------TTTTT--T
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc----------------ceeecccchh-------HHhcC--C
Confidence            678999999999999999999999999999999876421                1455665432       22233  4


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccc-cC--------CCC
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV-IP--------SDP  203 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~-~~--------~~~  203 (255)
                      +|+|||+||....  .   ..+.+..+..+++|+.++.++++++.   .+.+.+++|++||...+. ..        ..+
T Consensus       202 ~D~Vih~A~~~~~--~---~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~  273 (516)
T 3oh8_A          202 ADVLVHLAGEPIF--G---RFNDSHKEAIRESRVLPTKFLAELVA---ESTQCTTMISASAVGFYGHDRGDEILTEESES  273 (516)
T ss_dssp             CSEEEECCCC----------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC
T ss_pred             CCEEEECCCCccc--c---ccchhHHHHHHHHHHHHHHHHHHHHH---hcCCCCEEEEeCcceEecCCCCCCccCCCCCC
Confidence            6799999997532  1   33445567889999999999999743   234557999999976554 10        011


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                      ....|+.+|...+.+.+    +....|++++.++||.+.+|.
T Consensus       274 ~~~~y~~~~~~~E~~~~----~~~~~gi~~~ilRp~~v~Gp~  311 (516)
T 3oh8_A          274 GDDFLAEVCRDWEHATA----PASDAGKRVAFIRTGVALSGR  311 (516)
T ss_dssp             CSSHHHHHHHHHHHTTH----HHHHTTCEEEEEEECEEEBTT
T ss_pred             CcChHHHHHHHHHHHHH----HHHhCCCCEEEEEeeEEECCC
Confidence            34567878877665433    344569999999999999875

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.54  E-value=1.3e-13  Score=115.40  Aligned_cols=144  Identities=11%  Similarity=0.041  Sum_probs=104.8

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      ++++|||| |.||.+++++|.++|++|++++|+.++.+...+        ..+..+.+|++|- +         +.  ++
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~D~~d~-~---------~~--~~   64 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA--------SGAEPLLWPGEEP-S---------LD--GV   64 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH--------TTEEEEESSSSCC-C---------CT--TC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh--------CCCeEEEeccccc-c---------cC--CC
Confidence            67999998 999999999999999999999999887654322        2477888898872 1         33  46


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhh--CCCcEEEEECCccccccC---------CC
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK--RKKGAIVNIGSGAAIVIP---------SD  202 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~--~~~g~iv~vsS~~~~~~~---------~~  202 (255)
                      |++||+||.....       ..  .              ++.++..+.+  .+-+++|++||...+...         +.
T Consensus        65 d~vi~~a~~~~~~-------~~--~--------------~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~  121 (286)
T 3ius_A           65 THLLISTAPDSGG-------DP--V--------------LAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPL  121 (286)
T ss_dssp             CEEEECCCCBTTB-------CH--H--------------HHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCC
T ss_pred             CEEEECCCccccc-------cH--H--------------HHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCC
Confidence            7999999975321       11  0              1233333444  345789999997655421         11


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      .....|+.+|.+.+.+.+.+      .|++++.++|+.+-.|...
T Consensus       122 ~p~~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~  160 (286)
T 3ius_A          122 TPTAARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRG  160 (286)
T ss_dssp             CCCSHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBS
T ss_pred             CCCCHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCch
Confidence            12457999999999888776      5899999999999887643

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.53  E-value=4.8e-14  Score=122.00  Aligned_cols=159  Identities=18%  Similarity=0.085  Sum_probs=110.1

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcC-----CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTG-----LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G-----~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      |++++||||+|+||.+++++|+++|     ++|++++|+.....         .....+..+.+|++|.     +.+.+.
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~---------~~~~~~~~~~~Dl~d~-----~~~~~~   66 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW---------HEDNPINYVQCDISDP-----DDSQAK   66 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC---------CCSSCCEEEECCTTSH-----HHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc---------cccCceEEEEeecCCH-----HHHHHH
Confidence            5789999999999999999999999     99999999876432         0133567888999875     334445


Q ss_pred             hcCCC-ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEE-------EECCcccccc
Q 025260          128 IEGLD-VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIV-------NIGSGAAIVI  199 (255)
Q Consensus       128 ~~~~~-id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv-------~vsS~~~~~~  199 (255)
                      +.+.+ +|++||+||....           +.+..+++|+.++.++++++.+..  .+-.++|       ++||...+..
T Consensus        67 ~~~~~~~d~vih~a~~~~~-----------~~~~~~~~n~~~~~~l~~a~~~~~--~~~~~~v~~~g~~i~~Ss~~vyg~  133 (364)
T 2v6g_A           67 LSPLTDVTHVFYVTWANRS-----------TEQENCEANSKMFRNVLDAVIPNC--PNLKHISLQTGRKHYMGPFESYGK  133 (364)
T ss_dssp             HTTCTTCCEEEECCCCCCS-----------SHHHHHHHHHHHHHHHHHHHTTTC--TTCCEEEEECCTHHHHCCGGGTTT
T ss_pred             HhcCCCCCEEEECCCCCcc-----------hHHHHHHHhHHHHHHHHHHHHHhc--cccceEEeccCceEEEechhhccc
Confidence            55433 7799999997521           246788999999999999987642  1234676       6888754431


Q ss_pred             C------------CCCCchhchHHHHHHHHHHHHHHHHHc-cCC-ceEEEeeeeeeeeCCc
Q 025260          200 P------------SDPLYSVYAATKAYIDQFSRSLYVEYR-KSG-IDVQCQVLFLLCFYNL  246 (255)
Q Consensus       200 ~------------~~~~~~~Y~asK~al~~~~~~l~~e~~-~~g-i~v~~v~Pg~v~T~~~  246 (255)
                      .            ..|....|.    +    ++.+..++. ..| ++++.++|+.+-.|..
T Consensus       134 ~~~~~~~~~E~~~~~~~~~~y~----~----~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~  186 (364)
T 2v6g_A          134 IESHDPPYTEDLPRLKYMNFYY----D----LEDIMLEEVEKKEGLTWSVHRPGNIFGFSP  186 (364)
T ss_dssp             SCCCCSSBCTTSCCCSSCCHHH----H----HHHHHHHHHTTSTTCEEEEEEESSEECCCT
T ss_pred             cccCCCCCCccccCCccchhhH----H----HHHHHHHHhhcCCCceEEEECCCceeCCCC
Confidence            1            011133452    2    333333433 245 9999999999998654

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.50  E-value=2.4e-13  Score=115.23  Aligned_cols=152  Identities=14%  Similarity=0.104  Sum_probs=102.7

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh-----hHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD-----KLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      .++++||||+|+||++++++|+++|++|++++|+.+     +.+. .+++.    ...+..+.+|++|.     +.+.+.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~----~~~~~~~~~D~~d~-----~~l~~~   73 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQM-LLYFK----QLGAKLIEASLDDH-----QRLVDA   73 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHH-HHHHH----TTTCEEECCCSSCH-----HHHHHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHH-HHHHH----hCCeEEEeCCCCCH-----HHHHHH
Confidence            467999999999999999999999999999999853     2221 22222    23467788999875     345555


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCcccccc-----CC
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVI-----PS  201 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~-----~~  201 (255)
                      +.+  +|++||++|....  .               .|+.++..+++++    ++.+ -+++|+ | ..+...     +.
T Consensus        74 ~~~--~d~vi~~a~~~~~--~---------------~~~~~~~~l~~aa----~~~g~v~~~v~-S-~~g~~~~~~~~~~  128 (313)
T 1qyd_A           74 LKQ--VDVVISALAGGVL--S---------------HHILEQLKLVEAI----KEAGNIKRFLP-S-EFGMDPDIMEHAL  128 (313)
T ss_dssp             HTT--CSEEEECCCCSSS--S---------------TTTTTHHHHHHHH----HHSCCCSEEEC-S-CCSSCTTSCCCCC
T ss_pred             HhC--CCEEEECCccccc--h---------------hhHHHHHHHHHHH----HhcCCCceEEe-c-CCcCCccccccCC
Confidence            554  5699999997532  0               1555555555554    4454 568875 4 333210     11


Q ss_pred             CCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       202 ~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      .|....| .+|.+++.+.+       ..|++++.++||++.+++..
T Consensus       129 ~p~~~~y-~sK~~~e~~~~-------~~g~~~~ilrp~~~~~~~~~  166 (313)
T 1qyd_A          129 QPGSITF-IDKRKVRRAIE-------AASIPYTYVSSNMFAGYFAG  166 (313)
T ss_dssp             SSTTHHH-HHHHHHHHHHH-------HTTCCBCEEECCEEHHHHTT
T ss_pred             CCCcchH-HHHHHHHHHHH-------hcCCCeEEEEeceecccccc
Confidence            2345678 99999887664       24899999999998765443

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.49  E-value=8.5e-14  Score=118.58  Aligned_cols=148  Identities=11%  Similarity=0.121  Sum_probs=98.0

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh-h----hHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-D----KLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~-~----~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      .++++||||+|+||.+++++|+++|++|++++|+. +    ...+..+++..    ..+..+.+|++|.     +.+.+.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~----~~v~~v~~D~~d~-----~~l~~a   74 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS----MGVTIIEGEMEEH-----EKMVSV   74 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH----TTCEEEECCTTCH-----HHHHHH
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc----CCcEEEEecCCCH-----HHHHHH
Confidence            46799999999999999999999999999999986 2    22222222322    2367788999875     445555


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccc----cCCC
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIV----IPSD  202 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~----~~~~  202 (255)
                      +.+  +|++||++|...                     +.+.    +.+++.+.+.+ -+++|  .|..+..    .+..
T Consensus        75 ~~~--~d~vi~~a~~~~---------------------~~~~----~~l~~aa~~~g~v~~~v--~S~~g~~~~~~~~~~  125 (321)
T 3c1o_A           75 LKQ--VDIVISALPFPM---------------------ISSQ----IHIINAIKAAGNIKRFL--PSDFGCEEDRIKPLP  125 (321)
T ss_dssp             HTT--CSEEEECCCGGG---------------------SGGG----HHHHHHHHHHCCCCEEE--CSCCSSCGGGCCCCH
T ss_pred             HcC--CCEEEECCCccc---------------------hhhH----HHHHHHHHHhCCccEEe--ccccccCccccccCC
Confidence            654  569999998531                     2222    33333344444 46787  3444321    0111


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                      |....| .+|.+++.+.+.       .|++++.++||++..++.
T Consensus       126 p~~~~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~  161 (321)
T 3c1o_A          126 PFESVL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFV  161 (321)
T ss_dssp             HHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHH
T ss_pred             CcchHH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccc
Confidence            224579 999999887752       378899999999876544

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.47  E-value=1.3e-13  Score=116.53  Aligned_cols=152  Identities=20%  Similarity=0.188  Sum_probs=97.0

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhH--HHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL--KDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .++++||||+|+||++++++|+++|++|++++|+.+..  .+..+.+.+.. ...+..+.+|++|.     +.+.+.+.+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~-~~~v~~v~~D~~d~-----~~l~~~~~~   77 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDH-----ASLVEAVKN   77 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCH-----HHHHHHHHT
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH-hCCCEEEEeccCCH-----HHHHHHHcC
Confidence            46799999999999999999999999999999985321  11111121111 23467788999874     334445554


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCcccccc---CCCCCch
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVI---PSDPLYS  206 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~---~~~~~~~  206 (255)
                        +|++||++|...                     +.+...++++    +++.+ -+++|. |+......   +..|...
T Consensus        78 --~d~vi~~a~~~~---------------------~~~~~~l~~a----a~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~  129 (308)
T 1qyc_A           78 --VDVVISTVGSLQ---------------------IESQVNIIKA----IKEVGTVKRFFP-SEFGNDVDNVHAVEPAKS  129 (308)
T ss_dssp             --CSEEEECCCGGG---------------------SGGGHHHHHH----HHHHCCCSEEEC-SCCSSCTTSCCCCTTHHH
T ss_pred             --CCEEEECCcchh---------------------hhhHHHHHHH----HHhcCCCceEee-cccccCccccccCCcchh
Confidence              569999998531                     1222333333    44444 567773 43221211   1123346


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                      .| .+|.+++.+.+.       .|++++.++||++.+++.
T Consensus       130 ~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~  161 (308)
T 1qyc_A          130 VF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFL  161 (308)
T ss_dssp             HH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHT
T ss_pred             HH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccc
Confidence            78 999998877653       378899999999876544

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.46  E-value=1.6e-13  Score=116.82  Aligned_cols=147  Identities=16%  Similarity=0.137  Sum_probs=97.3

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      ++++||||+|+||.+++++|+++|++|++++|+.+...+..+++..    ..+..+.+|+.|.     +.+.+.+.+  +
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~----~~v~~v~~Dl~d~-----~~l~~a~~~--~   80 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS----LGAIIVKGELDEH-----EKLVELMKK--V   80 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH----TTCEEEECCTTCH-----HHHHHHHTT--C
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc----CCCEEEEecCCCH-----HHHHHHHcC--C
Confidence            5799999999999999999999999999999997522222233322    2356788999875     445555554  5


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccc-c---CCCCCchhc
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIV-I---PSDPLYSVY  208 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~-~---~~~~~~~~Y  208 (255)
                      |++||++|...                     +.+.    +.+++.+++.+ -+++|+ |+ .+.. .   +..|....|
T Consensus        81 d~vi~~a~~~~---------------------~~~~----~~l~~aa~~~g~v~~~v~-S~-~g~~~~~~~~~~p~~~~y  133 (318)
T 2r6j_A           81 DVVISALAFPQ---------------------ILDQ----FKILEAIKVAGNIKRFLP-SD-FGVEEDRINALPPFEALI  133 (318)
T ss_dssp             SEEEECCCGGG---------------------STTH----HHHHHHHHHHCCCCEEEC-SC-CSSCTTTCCCCHHHHHHH
T ss_pred             CEEEECCchhh---------------------hHHH----HHHHHHHHhcCCCCEEEe-ec-cccCcccccCCCCcchhH
Confidence            69999998531                     1222    33333344444 567774 43 3321 1   011224578


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                       .+|.+++.+.+.       .|++++.++||++..++.
T Consensus       134 -~sK~~~e~~~~~-------~~~~~~~lr~~~~~~~~~  163 (318)
T 2r6j_A          134 -ERKRMIRRAIEE-------ANIPYTYVSANCFASYFI  163 (318)
T ss_dssp             -HHHHHHHHHHHH-------TTCCBEEEECCEEHHHHH
T ss_pred             -HHHHHHHHHHHh-------cCCCeEEEEcceehhhhh
Confidence             999998876642       478999999998876543

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.39  E-value=1.5e-13  Score=115.76  Aligned_cols=110  Identities=21%  Similarity=0.261  Sum_probs=82.5

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      +++||+++||||+||||++++++|+++|++|++++|+.++.++..+++.+..   .+..+.+|+++.     +.+.+.+.
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~---~~~~~~~D~~~~-----~~~~~~~~  187 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF---KVNVTAAETADD-----ASRAEAVK  187 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH---TCCCEEEECCSH-----HHHHHHTT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEecCCCH-----HHHHHHHH
Confidence            4569999999999999999999999999999999999998888888776532   245567888864     34444444


Q ss_pred             CCCccEEEEecCCCCCcccccccCCH-HHHHhHhHHhhhHHH
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQ-VLLKNLIKVNVEGTT  170 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~-~~~~~~~~~N~~~~~  170 (255)
                      +  +|++|||+|..... .+..+.+. ++++..+++|+.+++
T Consensus       188 ~--~DvlVn~ag~g~~~-~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 G--AHFVFTAGAIGLEL-LPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             T--CSEEEECCCTTCCS-BCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             h--CCEEEECCCccccC-CChhHcCchHHHHHHHHhhhhhhH
Confidence            4  56999999864321 22323333 556778999999886

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.22  E-value=4.7e-10  Score=94.39  Aligned_cols=154  Identities=16%  Similarity=0.131  Sum_probs=98.9

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG  134 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id  134 (255)
                      .||||||+|.||++++++|.++|++|+++.|++..              ..+.   .|         +...+.+.  ++|
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~--------------~~~~---~~---------~~~~~~l~--~~d   53 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP--------------GRIT---WD---------ELAASGLP--SCD   53 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT--------------TEEE---HH---------HHHHHCCC--SCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc--------------Ceee---cc---------hhhHhhcc--CCC
Confidence            58999999999999999999999999999997542              1111   00         11122333  466


Q ss_pred             EEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC---------CCCCc
Q 025260          135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDPLY  205 (255)
Q Consensus       135 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~---------~~~~~  205 (255)
                      .+||.||....  ......+.+..+..++.|+.++-.+.+.+...  +.+..++|+.||...+...         +....
T Consensus        54 ~vihla~~~i~--~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~--~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~  129 (298)
T 4b4o_A           54 AAVNLAGENIL--NPLRRWNETFQKEVLGSRLETTQLLAKAITKA--PQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDF  129 (298)
T ss_dssp             EEEECCCCCSS--CTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHC--SSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCS
T ss_pred             EEEEeccCccc--chhhhhhhhhhhhhhhHHHHHHHHHHHHHHHh--CCCceEEEEEeeeeeecCCCCCcccccCCcccc
Confidence            99999986432  22334466666788899999988877765431  2234567777876655421         11112


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                      ..|+.+|...+.     .......++++..++|+.+-.|-
T Consensus       130 ~~~~~~~~~~e~-----~~~~~~~~~~~~~~r~~~v~g~~  164 (298)
T 4b4o_A          130 DFFSNLVTKWEA-----AARLPGDSTRQVVVRSGVVLGRG  164 (298)
T ss_dssp             SHHHHHHHHHHH-----HHCCSSSSSEEEEEEECEEECTT
T ss_pred             chhHHHHHHHHH-----HHHhhccCCceeeeeeeeEEcCC
Confidence            334444433332     12234568999999999998875

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.16  E-value=5.8e-11  Score=101.70  Aligned_cols=166  Identities=17%  Similarity=0.137  Sum_probs=108.1

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCC-------cEEEEeCCh--hhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHH
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGL-------NLVLVGRNP--DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERI  124 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~-------~V~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  124 (255)
                      ..++||||+|.||.+++..|+++|.       +|++.++++  +..+....++...  ...+.   .|+.+.     +.+
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~--~~~~~---~di~~~-----~~~   74 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC--AFPLL---AGLEAT-----DDP   74 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT--TCTTE---EEEEEE-----SCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc--ccccc---CCeEec-----cCh
Confidence            4699999999999999999999996       799999875  2233323344321  11111   233321     113


Q ss_pred             HHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccc-------
Q 025260          125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAI-------  197 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~-------  197 (255)
                      .+.+.  +.|++||.||....   +  ..+.   .+.+++|+.++..+++++...-  ..+++++++|+....       
T Consensus        75 ~~a~~--~~D~Vih~Ag~~~~---~--~~~~---~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~~~~~~~~~~  142 (327)
T 1y7t_A           75 KVAFK--DADYALLVGAAPRK---A--GMER---RDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPANTNALIAYK  142 (327)
T ss_dssp             HHHTT--TCSEEEECCCCCCC---T--TCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHH
T ss_pred             HHHhC--CCCEEEECCCcCCC---C--CCCH---HHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCchhhhHHHHHH
Confidence            34444  46699999997532   1  2233   4578999999998888865421  134688888875421       


Q ss_pred             ccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          198 VIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       198 ~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                      ..++.+....|+.+|...+.+.+.+++++   |+.+..++|+.|-.|
T Consensus       143 ~~~~~~p~~~yg~tkl~~er~~~~~a~~~---g~~~~~vr~~~V~G~  186 (327)
T 1y7t_A          143 NAPGLNPRNFTAMTRLDHNRAKAQLAKKT---GTGVDRIRRMTVWGN  186 (327)
T ss_dssp             TCTTSCGGGEEECCHHHHHHHHHHHHHHH---TCCGGGEECCEEEBC
T ss_pred             HcCCCChhheeccchHHHHHHHHHHHHHh---CcChhheeeeEEEcC
Confidence            11123445679999999999888888776   666666776665554

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.06  E-value=3.9e-10  Score=90.83  Aligned_cols=152  Identities=13%  Similarity=0.099  Sum_probs=90.6

Q ss_pred             cCCcEEEEECC----------------CCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECC
Q 025260           51 KYGSWALVTGP----------------TDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS  114 (255)
Q Consensus        51 ~~gk~vlITGa----------------s~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  114 (255)
                      ++||+|+||||                |||||.++|++|+++|++|++++++.. ++         .+. .+  -.+|++
T Consensus         6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~---------~~~-g~--~~~dv~   72 (226)
T 1u7z_A            6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP---------TPP-FV--KRVDVM   72 (226)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC---------CCT-TE--EEEECC
T ss_pred             CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc---------cCC-CC--eEEccC
Confidence            56999999999                689999999999999999999988652 11         011 12  245666


Q ss_pred             CCcHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhH--hHHhhhHHHHHHHHHhhhhhhC-CCcEEEEE
Q 025260          115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNL--IKVNVEGTTKVTQAVLPGMLKR-KKGAIVNI  191 (255)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~--~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~v  191 (255)
                      + .++..+.+.+.+++.  |++|||||+...  .+. +.+.+.+.+.  -+.|+.-.+..+.-+++.+.+. +.+.+ .+
T Consensus        73 ~-~~~~~~~v~~~~~~~--Dili~~Aav~d~--~p~-~~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~~~~~~-~V  145 (226)
T 1u7z_A           73 T-ALEMEAAVNASVQQQ--NIFIGCAAVADY--RAA-TVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPY-VV  145 (226)
T ss_dssp             S-HHHHHHHHHHHGGGC--SEEEECCBCCSE--EES-SCCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCE-EE
T ss_pred             c-HHHHHHHHHHhcCCC--CEEEECCcccCC--CCc-cCChHHhccccccCCceEEEEeecHHHHHHHHhhhcCCcE-EE
Confidence            4 567778888888864  599999998642  222 2222222220  0112222222223344445443 22332 12


Q ss_pred             CCccccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeee
Q 025260          192 GSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFL  240 (255)
Q Consensus       192 sS~~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~  240 (255)
                      +         ++   .+.      +.+.+..+.++..+|+++.+..|-.
T Consensus       146 G---------Fa---aEt------~~l~e~A~~kL~~k~~d~ivaN~~~  176 (226)
T 1u7z_A          146 G---------FA---AET------NNVEEYARQKRIRKNLDLICANDVS  176 (226)
T ss_dssp             E---------EE---EES------SSHHHHHHHHHHHHTCSEEEEEECS
T ss_pred             E---------cc---hhh------chHHHHHHHHHHhcCCCEEEEeecc
Confidence            1         11   111      3367777888888888887777754

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=99.01  E-value=2e-11  Score=108.47  Aligned_cols=166  Identities=14%  Similarity=0.135  Sum_probs=91.5

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHH------HhhcCCceEEEEEEECCCCcHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI------QAKYAKTQIKSVVVDFSGDLDEGV  121 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~------~~~~~~~~~~~~~~d~~~~~~~~~  121 (255)
                      .+.+.||+|+|||++ +||+++|+.|++.|++|+++++++...++..++.      .+.....++..   +.... ...+
T Consensus       260 g~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi---~atG~-~~vl  334 (488)
T 3ond_A          260 DVMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFV---TTTGN-KDII  334 (488)
T ss_dssp             CCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEE---ECSSC-SCSB
T ss_pred             CCcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEE---eCCCC-hhhh
Confidence            345779999999998 9999999999999999999999987766554321      01111122222   11110 0111


Q ss_pred             HHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhH-------hHHhhhHHHHHH-HHHhhhhhhCCCcEEEEECC
Q 025260          122 ERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNL-------IKVNVEGTTKVT-QAVLPGMLKRKKGAIVNIGS  193 (255)
Q Consensus       122 ~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~-------~~~N~~~~~~l~-~~~lp~~~~~~~g~iv~vsS  193 (255)
                      .  .+.+.....+.+|+|+|...      .+++.+.++..       +..|+.+..... +..++.|.   .|+|||+||
T Consensus       335 ~--~e~l~~mk~gaiVvNaG~~~------~Ei~~~~l~~~~~v~~~~i~~~v~~~~~~~fg~aI~lLa---eGRIVNlsS  403 (488)
T 3ond_A          335 M--LDHMKKMKNNAIVCNIGHFD------NEIDMLGLETHPGVKRITIKPQTDRWVFPETNTGIIILA---EGRLMNLGC  403 (488)
T ss_dssp             C--HHHHTTSCTTEEEEESSSTT------TTBTHHHHHTSTTCEEEEEETTEEEEECTTTCCEEEEEG---GGSCHHHHH
T ss_pred             h--HHHHHhcCCCeEEEEcCCCC------cccchHHHHHhhhhheEEeeeeEEEEEecchHHHHHHHc---CCcEEEEec
Confidence            0  01233334457888898752      24556666544       233333322222 33344332   389999999


Q ss_pred             ccccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeee
Q 025260          194 GAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFL  240 (255)
Q Consensus       194 ~~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~  240 (255)
                      ..|..  +......|+         .+.|++++.-.+..++.+.||.
T Consensus       404 ~~G~p--~~vm~~sfa---------~Q~la~~~l~~~~~~~~~~~gv  439 (488)
T 3ond_A          404 ATGHP--SFVMSCSFT---------NQVIAQLELWNEKSSGKYEKKV  439 (488)
T ss_dssp             SCCSC--HHHHHHHHH---------HHHHHHHHHHHTTTTCCCCSSE
T ss_pred             CcccC--cccccccHH---------HHHHHHHHHHhCCCccccCCCc
Confidence            77643  211122222         3566666543344444556664

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.91  E-value=3.4e-09  Score=85.59  Aligned_cols=79  Identities=19%  Similarity=0.273  Sum_probs=58.9

Q ss_pred             CCcEEEEECC----------------CCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC
Q 025260           52 YGSWALVTGP----------------TDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG  115 (255)
Q Consensus        52 ~gk~vlITGa----------------s~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  115 (255)
                      +||+|+||||                ||++|.++|++++++|++|++++|+... ..       .. ...+..  .|+. 
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~-~~-------~~-~~~~~~--~~v~-   69 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRAL-KP-------EP-HPNLSI--REIT-   69 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSC-CC-------CC-CTTEEE--EECC-
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccc-cc-------cC-CCCeEE--EEHh-
Confidence            5899999999                7789999999999999999999997542 10       00 112333  3333 


Q ss_pred             CcHHHHHHHHHHhcCCCccEEEEecCCCC
Q 025260          116 DLDEGVERIKEAIEGLDVGVLINNVGISY  144 (255)
Q Consensus       116 ~~~~~~~~~~~~~~~~~id~lv~nag~~~  144 (255)
                      ..++..+.+.+.+++.|  ++|+|||+..
T Consensus        70 s~~em~~~v~~~~~~~D--ili~aAAvsD   96 (232)
T 2gk4_A           70 NTKDLLIEMQERVQDYQ--VLIHSMAVSD   96 (232)
T ss_dssp             SHHHHHHHHHHHGGGCS--EEEECSBCCS
T ss_pred             HHHHHHHHHHHhcCCCC--EEEEcCcccc
Confidence            45778888888888655  9999999864

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.86  E-value=9.6e-09  Score=81.21  Aligned_cols=79  Identities=20%  Similarity=0.233  Sum_probs=58.7

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++|+||||++|||.++++.+.+.|++|++++|++++.+...    +.  +..   ..+|..+.  +..+.+.+..++.
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~~--g~~---~~~d~~~~--~~~~~~~~~~~~~  106 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----RL--GVE---YVGDSRSV--DFADEILELTDGY  106 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----TT--CCS---EEEETTCS--THHHHHHHHTTTC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----Hc--CCC---EEeeCCcH--HHHHHHHHHhCCC
Confidence            4899999999999999999999999999999999987665432    22  222   12466553  4455666655444


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      .+|++|+|+|
T Consensus       107 ~~D~vi~~~g  116 (198)
T 1pqw_A          107 GVDVVLNSLA  116 (198)
T ss_dssp             CEEEEEECCC
T ss_pred             CCeEEEECCc
Confidence            6889999997

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.74  E-value=1.8e-09  Score=98.08  Aligned_cols=101  Identities=16%  Similarity=0.215  Sum_probs=67.3

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      +++||+++|||| ||+|++++++|++.|++|++++|+.+++++..+++.     ...    .++. ++        +.++
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~-----~~~----~~~~-dl--------~~~~  421 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIG-----GKA----LSLT-DL--------DNYH  421 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT-----C-C----EETT-TT--------TTC-
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC-----Cce----eeHH-Hh--------hhcc
Confidence            356899999999 599999999999999999999999988877766541     111    1222 11        1112


Q ss_pred             CCCccEEEEecCCCCCc---ccccccCCHHHHHhHhHHhhhHH
Q 025260          130 GLDVGVLINNVGISYPY---ARFFHEVDQVLLKNLIKVNVEGT  169 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~---~~~~~~~~~~~~~~~~~~N~~~~  169 (255)
                      ..++|++|||+|+....   ..++.+.+.+.++.++++|+.+.
T Consensus       422 ~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          422 PEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             -CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred             ccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence            22478999999975321   13455666777889999999875

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.73  E-value=4.4e-08  Score=70.35  Aligned_cols=73  Identities=15%  Similarity=0.211  Sum_probs=56.2

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcC-CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G-~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      ++.++|+|+ |++|.++++.|.+.| ++|++++|++++.++..        ...+..+.+|+.+.     +.+.+.+.  
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~-----~~~~~~~~--   68 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN--------RMGVATKQVDAKDE-----AGLAKALG--   68 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH--------TTTCEEEECCTTCH-----HHHHHHTT--
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH--------hCCCcEEEecCCCH-----HHHHHHHc--
Confidence            578999999 999999999999999 89999999988766543        12245567787764     34445555  


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      ++|++|++++
T Consensus        69 ~~d~vi~~~~   78 (118)
T 3ic5_A           69 GFDAVISAAP   78 (118)
T ss_dssp             TCSEEEECSC
T ss_pred             CCCEEEECCC
Confidence            4569999985

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.67  E-value=1.1e-07  Score=81.82  Aligned_cols=104  Identities=20%  Similarity=0.273  Sum_probs=71.9

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++|+|+||+||||.++++.+...|++|++++|++++++... +   .  +..   ..+|..++ ++..+.+.+..++ 
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-~---~--g~~---~~~d~~~~-~~~~~~~~~~~~~-  237 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-S---I--GGE---VFIDFTKE-KDIVGAVLKATDG-  237 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-H---T--TCC---EEEETTTC-SCHHHHHHHHHTS-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-H---c--CCc---eEEecCcc-HhHHHHHHHHhCC-
Confidence            4899999999999999999999999999999999988765432 2   2  222   22466532 1333444444445 


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcc
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGA  195 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~  195 (255)
                      .+|++|+|+|..            +               ..+..++.+.  ++|+++.+++..
T Consensus       238 ~~D~vi~~~g~~------------~---------------~~~~~~~~l~--~~G~iv~~g~~~  272 (347)
T 2hcy_A          238 GAHGVINVSVSE------------A---------------AIEASTRYVR--ANGTTVLVGMPA  272 (347)
T ss_dssp             CEEEEEECSSCH------------H---------------HHHHHTTSEE--EEEEEEECCCCT
T ss_pred             CCCEEEECCCcH------------H---------------HHHHHHHHHh--cCCEEEEEeCCC
Confidence            788999999831            0               2355556553  458999998754

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.65  E-value=1.1e-07  Score=81.35  Aligned_cols=79  Identities=18%  Similarity=0.230  Sum_probs=57.8

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++++||||++|||.++++.+.+.|++|++++|++++++.+ +++     +..   ..+|.++. ++..+.+.+..++ 
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~-----g~~---~~~d~~~~-~~~~~~~~~~~~~-  213 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI-----GFD---AAFNYKTV-NSLEEALKKASPD-  213 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCS---EEEETTSC-SCHHHHHHHHCTT-
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc-----CCc---EEEecCCH-HHHHHHHHHHhCC-
Confidence            489999999999999999999999999999999998777655 332     222   23466641 1333444444332 


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      .+|++|+|+|
T Consensus       214 ~~d~vi~~~g  223 (333)
T 1v3u_A          214 GYDCYFDNVG  223 (333)
T ss_dssp             CEEEEEESSC
T ss_pred             CCeEEEECCC
Confidence            6889999998

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.65  E-value=5.6e-08  Score=85.49  Aligned_cols=83  Identities=22%  Similarity=0.269  Sum_probs=63.4

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcC---CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTG---LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G---~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      +.++|+|| ||||+++++.|++.|   .+|++.+|+.+++++..+++...+ +.++..+.+|+++.  +.++++.+..  
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~-~~~~~~~~~D~~d~--~~l~~~l~~~--   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG-YGEIDITTVDADSI--EELVALINEV--   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT-CCCCEEEECCTTCH--HHHHHHHHHH--
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc-CCceEEEEecCCCH--HHHHHHHHhh--
Confidence            46899999 899999999999998   489999999999998888876543 23567788898864  3333333322  


Q ss_pred             CCccEEEEecCCC
Q 025260          131 LDVGVLINNVGIS  143 (255)
Q Consensus       131 ~~id~lv~nag~~  143 (255)
                       ++|+||||+|..
T Consensus        76 -~~DvVin~ag~~   87 (405)
T 4ina_A           76 -KPQIVLNIALPY   87 (405)
T ss_dssp             -CCSEEEECSCGG
T ss_pred             -CCCEEEECCCcc
Confidence             467999999853

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.63  E-value=1.7e-07  Score=80.08  Aligned_cols=80  Identities=16%  Similarity=0.304  Sum_probs=60.2

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++++||||+||||.++++.+...|++|++++|++++++.+.+ +   +  ..   ..+|..++  +..+.+.+..+..
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~---g--~~---~~~d~~~~--~~~~~i~~~~~~~  213 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-L---G--CH---HTINYSTQ--DFAEVVREITGGK  213 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H---T--CS---EEEETTTS--CHHHHHHHHHTTC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---C--CC---EEEECCCH--HHHHHHHHHhCCC
Confidence            48999999999999999999999999999999999877665432 2   2  22   12465543  4455666655544


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      .+|++|+|+|.
T Consensus       214 ~~d~vi~~~g~  224 (333)
T 1wly_A          214 GVDVVYDSIGK  224 (333)
T ss_dssp             CEEEEEECSCT
T ss_pred             CCeEEEECCcH
Confidence            68899999984

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.63  E-value=1.5e-07  Score=80.18  Aligned_cols=79  Identities=22%  Similarity=0.246  Sum_probs=60.0

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++|+||||+||||.++++.+...|++|++++|++++++...+ +   +  ..   ..+|..++  +..+.+.+..++.
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~---g--~~---~~~~~~~~--~~~~~~~~~~~~~  208 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A---G--AW---QVINYREE--DLVERLKEITGGK  208 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H---T--CS---EEEETTTS--CHHHHHHHHTTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---C--CC---EEEECCCc--cHHHHHHHHhCCC
Confidence            48999999999999999999999999999999999877665433 2   2  22   12465543  4456666655544


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      .+|++|+|+|
T Consensus       209 ~~D~vi~~~g  218 (327)
T 1qor_A          209 KVRVVYDSVG  218 (327)
T ss_dssp             CEEEEEECSC
T ss_pred             CceEEEECCc
Confidence            6889999998

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.62  E-value=2e-07  Score=80.47  Aligned_cols=80  Identities=14%  Similarity=0.245  Sum_probs=61.0

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++|+||||+||||.++++.+...|++|++++|++++++.+ +++   +  ..   ..+|..+.  +..+.+.+..++.
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---g--~~---~~~~~~~~--~~~~~~~~~~~~~  230 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL---G--AA---AGFNYKKE--DFSEATLKFTKGA  230 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---T--CS---EEEETTTS--CHHHHHHHHTTTS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---C--Cc---EEEecCCh--HHHHHHHHHhcCC
Confidence            489999999999999999999999999999999998877655 333   2  22   23465543  4556666665544


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      .+|++|+|+|.
T Consensus       231 ~~d~vi~~~G~  241 (354)
T 2j8z_A          231 GVNLILDCIGG  241 (354)
T ss_dssp             CEEEEEESSCG
T ss_pred             CceEEEECCCc
Confidence            68899999984

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.58  E-value=1.6e-07  Score=81.07  Aligned_cols=79  Identities=19%  Similarity=0.264  Sum_probs=59.5

Q ss_pred             CC--cEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           52 YG--SWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        52 ~g--k~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      .|  ++|+||||+||||.++++.+...|+ +|+++++++++++.+.+++     +..   ..+|..++  +..+.+.+..
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~-----g~~---~~~d~~~~--~~~~~~~~~~  227 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL-----GFD---AAINYKKD--NVAEQLRESC  227 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS-----CCS---EEEETTTS--CHHHHHHHHC
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc-----CCc---eEEecCch--HHHHHHHHhc
Confidence            37  9999999999999999999999999 9999999987766554322     222   23466543  4445566555


Q ss_pred             cCCCccEEEEecC
Q 025260          129 EGLDVGVLINNVG  141 (255)
Q Consensus       129 ~~~~id~lv~nag  141 (255)
                      ++ .+|++|+|+|
T Consensus       228 ~~-~~d~vi~~~G  239 (357)
T 2zb4_A          228 PA-GVDVYFDNVG  239 (357)
T ss_dssp             TT-CEEEEEESCC
T ss_pred             CC-CCCEEEECCC
Confidence            55 7889999998

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.57  E-value=3e-07  Score=79.28  Aligned_cols=79  Identities=18%  Similarity=0.236  Sum_probs=60.2

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++|+|+||+||||.++++.+...|++|++++|++++++.. ++   .+  ..   ..+|..++  +..+++.+..+..
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~---~g--a~---~~~d~~~~--~~~~~~~~~~~~~  238 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQ---NG--AH---EVFNHREV--NYIDKIKKYVGEK  238 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HH---TT--CS---EEEETTST--THHHHHHHHHCTT
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HH---cC--CC---EEEeCCCc--hHHHHHHHHcCCC
Confidence            489999999999999999999999999999999998876633 22   22  22   22465543  5556677666655


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      .+|++|+|+|
T Consensus       239 ~~D~vi~~~G  248 (351)
T 1yb5_A          239 GIDIIIEMLA  248 (351)
T ss_dssp             CEEEEEESCH
T ss_pred             CcEEEEECCC
Confidence            6889999998

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.57  E-value=4e-08  Score=82.44  Aligned_cols=81  Identities=27%  Similarity=0.435  Sum_probs=58.7

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      ++++|+++|||++ |+|+++++.|++.| +|++++|+.+++++..+++...+....  .+.+|+.+.        .+.++
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~--~~~~d~~~~--------~~~~~  192 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKF--GEEVKFSGL--------DVDLD  192 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCH--HHHEEEECT--------TCCCT
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhccccc--ceeEEEeeH--------HHhhC
Confidence            4569999999997 99999999999999 999999999988888877754321110  112333321        22233


Q ss_pred             CCCccEEEEecCCCC
Q 025260          130 GLDVGVLINNVGISY  144 (255)
Q Consensus       130 ~~~id~lv~nag~~~  144 (255)
                        ++|++|||+|...
T Consensus       193 --~~DilVn~ag~~~  205 (287)
T 1nvt_A          193 --GVDIIINATPIGM  205 (287)
T ss_dssp             --TCCEEEECSCTTC
T ss_pred             --CCCEEEECCCCCC
Confidence              4669999999754

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.56  E-value=1.8e-07  Score=81.19  Aligned_cols=108  Identities=18%  Similarity=0.225  Sum_probs=68.9

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      .+++++|+|+|+ |+||+++++.+...|++|++++|+++++++..+.+     +..   +.+|.++.     +.+.+.+.
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~-----g~~---~~~~~~~~-----~~l~~~~~  228 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF-----GGR---VITLTATE-----ANIKKSVQ  228 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----TTS---EEEEECCH-----HHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc-----Cce---EEEecCCH-----HHHHHHHh
Confidence            366899999999 99999999999999999999999988776554332     222   34455542     22333344


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccc
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA  196 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~  196 (255)
                      +  .|++|+++|.... ..                    +..+.+..++.|+  ++++||++++..+
T Consensus       229 ~--~DvVi~~~g~~~~-~~--------------------~~li~~~~l~~mk--~gg~iV~v~~~~g  270 (369)
T 2eez_A          229 H--ADLLIGAVLVPGA-KA--------------------PKLVTRDMLSLMK--EGAVIVDVAVDQG  270 (369)
T ss_dssp             H--CSEEEECCC----------------------------CCSCHHHHTTSC--TTCEEEECC----
T ss_pred             C--CCEEEECCCCCcc-cc--------------------chhHHHHHHHhhc--CCCEEEEEecCCC
Confidence            3  5599999986421 00                    0122355566663  4688999988653

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.50  E-value=3.5e-07  Score=78.19  Aligned_cols=80  Identities=15%  Similarity=0.279  Sum_probs=59.5

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++|+|+||+||||.++++.+...|++|++++|++++++.+.+++     +..   ..+|..++  +..+.+.+..++ 
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~-----g~~---~~~~~~~~--~~~~~~~~~~~~-  217 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL-----GFD---GAIDYKNE--DLAAGLKRECPK-  217 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT-----CCS---EEEETTTS--CHHHHHHHHCTT-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCC---EEEECCCH--HHHHHHHHhcCC-
Confidence            4899999999999999999999999999999999988776553332     221   12455543  445556555543 


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      .+|++|+|+|.
T Consensus       218 ~~d~vi~~~g~  228 (336)
T 4b7c_A          218 GIDVFFDNVGG  228 (336)
T ss_dssp             CEEEEEESSCH
T ss_pred             CceEEEECCCc
Confidence            68899999983

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.46  E-value=1.3e-06  Score=73.89  Aligned_cols=84  Identities=17%  Similarity=0.330  Sum_probs=62.2

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCC---hhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN---PDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERI  124 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  124 (255)
                      .+++||+++|+|+ ||+|++++..|++.|+ +|++++|+   .++.++..+++.+..+ ..+.  ..+..+.     +.+
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~-~~~~--~~~~~~~-----~~l  220 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD-CKAQ--LFDIEDH-----EQL  220 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS-CEEE--EEETTCH-----HHH
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC-CceE--EeccchH-----HHH
Confidence            4567999999998 7999999999999999 89999999   8888888888876542 2232  3344432     234


Q ss_pred             HHHhcCCCccEEEEecCCC
Q 025260          125 KEAIEGLDVGVLINNVGIS  143 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~  143 (255)
                      .+.+.+  .|++||+....
T Consensus       221 ~~~l~~--aDiIINaTp~G  237 (315)
T 3tnl_A          221 RKEIAE--SVIFTNATGVG  237 (315)
T ss_dssp             HHHHHT--CSEEEECSSTT
T ss_pred             HhhhcC--CCEEEECccCC
Confidence            444554  45999987653

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.45  E-value=1.2e-06  Score=75.12  Aligned_cols=79  Identities=14%  Similarity=0.232  Sum_probs=59.7

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++++|+||+||+|..+++.+...|++|+++++++++++.+. ++   +  ...   .+|..++  +..+.+.+..+..
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~---g--a~~---~~d~~~~--~~~~~~~~~~~~~  234 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL---G--ADE---TVNYTHP--DWPKEVRRLTGGK  234 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---T--CSE---EEETTST--THHHHHHHHTTTT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc---C--CCE---EEcCCcc--cHHHHHHHHhCCC
Confidence            4899999999999999999999999999999999988776553 22   2  221   2466553  4445566555444


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      .+|++|+|+|
T Consensus       235 ~~d~vi~~~g  244 (343)
T 2eih_A          235 GADKVVDHTG  244 (343)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            6889999998

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.38  E-value=1.7e-06  Score=73.58  Aligned_cols=80  Identities=20%  Similarity=0.297  Sum_probs=61.1

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++|+|+||+|+||...++.+...|++|+++++++++++.+. ++   +  ..   ...|..+.  +..+.+.+..++.
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---G--a~---~~~~~~~~--~~~~~~~~~~~~~  208 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL---G--AW---ETIDYSHE--DVAKRVLELTDGK  208 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH---T--CS---EEEETTTS--CHHHHHHHHTTTC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---C--CC---EEEeCCCc--cHHHHHHHHhCCC
Confidence            4899999999999999999999999999999999988776543 22   2  22   12354443  5556777766665


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      .+|++++|+|.
T Consensus       209 g~Dvvid~~g~  219 (325)
T 3jyn_A          209 KCPVVYDGVGQ  219 (325)
T ss_dssp             CEEEEEESSCG
T ss_pred             CceEEEECCCh
Confidence            78999999984

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.37  E-value=2.2e-06  Score=73.61  Aligned_cols=80  Identities=16%  Similarity=0.176  Sum_probs=58.0

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHc-CCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~-G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++|+||||++|||..+++.+... |++|+++++++++++.+. ++   +  ..   ..+|..+.  +..+.+.+..+.
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~---g--~~---~~~~~~~~--~~~~~~~~~~~~  238 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RA---G--AD---YVINASMQ--DPLAEIRRITES  238 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HH---T--CS---EEEETTTS--CHHHHHHHHTTT
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh---C--CC---EEecCCCc--cHHHHHHHHhcC
Confidence            4899999999999999999999999 999999999988766542 22   2  22   12355543  344455554431


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                      ..+|++|+|+|.
T Consensus       239 ~~~d~vi~~~g~  250 (347)
T 1jvb_A          239 KGVDAVIDLNNS  250 (347)
T ss_dssp             SCEEEEEESCCC
T ss_pred             CCceEEEECCCC
Confidence            268899999984

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.36  E-value=7.6e-06  Score=69.81  Aligned_cols=153  Identities=17%  Similarity=0.111  Sum_probs=96.8

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCC-------cEEEEeCC----hhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHH
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGL-------NLVLVGRN----PDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGV  121 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~-------~V~l~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  121 (255)
                      ...++||||+|.+|.+++..|+.+|.       +|.+.|++    +++++....++.+..... .  .++..+++     
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~--~~i~~~~~-----   76 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-L--AGMTAHAD-----   76 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-E--EEEEEESS-----
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-c--CcEEEecC-----
Confidence            35799999999999999999999885       79999998    655665555665421111 1  22222222     


Q ss_pred             HHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccc----
Q 025260          122 ERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAI----  197 (255)
Q Consensus       122 ~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~----  197 (255)
                        ..+.+.+  .|++|+.||.....     ..+.   .+.++.|......+++.+..+-  ..+++++++|.....    
T Consensus        77 --~~~al~~--aD~Vi~~ag~~~~~-----g~~r---~dl~~~N~~i~~~i~~~i~~~~--~p~a~ii~~SNPv~~~t~~  142 (329)
T 1b8p_A           77 --PMTAFKD--ADVALLVGARPRGP-----GMER---KDLLEANAQIFTVQGKAIDAVA--SRNIKVLVVGNPANTNAYI  142 (329)
T ss_dssp             --HHHHTTT--CSEEEECCCCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHH
T ss_pred             --cHHHhCC--CCEEEEeCCCCCCC-----CCCH---HHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccCchHHHHHH
Confidence              4445554  45999999975321     2233   2356778777777776654421  146789999874421    


Q ss_pred             ---ccCCCCCchhchHHHHHHHHHHHHHHHHHc
Q 025260          198 ---VIPSDPLYSVYAATKAYIDQFSRSLYVEYR  227 (255)
Q Consensus       198 ---~~~~~~~~~~Y~asK~al~~~~~~l~~e~~  227 (255)
                         ..++.|....|+.++.--..+...+++++.
T Consensus       143 ~~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          143 AMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             HHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             HHHHcCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence               111334444578777655667777777763

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.36  E-value=8.6e-07  Score=73.62  Aligned_cols=76  Identities=14%  Similarity=0.252  Sum_probs=56.2

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      ++++|+++|+|+ ||+|+++++.|++.|++|++++|+.+++++..+++...+   .+     +..+. ++    +.+  +
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~---~~-----~~~~~-~~----~~~--~  179 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG---SI-----QALSM-DE----LEG--H  179 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS---SE-----EECCS-GG----GTT--C
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC---Ce-----eEecH-HH----hcc--C
Confidence            456999999998 799999999999999999999999998888777664321   12     22221 11    111  3


Q ss_pred             CCCccEEEEecCCC
Q 025260          130 GLDVGVLINNVGIS  143 (255)
Q Consensus       130 ~~~id~lv~nag~~  143 (255)
                        +.|++|||+|..
T Consensus       180 --~~DivVn~t~~~  191 (271)
T 1nyt_A          180 --EFDLIINATSSG  191 (271)
T ss_dssp             --CCSEEEECCSCG
T ss_pred             --CCCEEEECCCCC
Confidence              566999999975

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.36  E-value=3.1e-07  Score=70.00  Aligned_cols=75  Identities=11%  Similarity=0.078  Sum_probs=54.1

Q ss_pred             chHHHHHHHHHHcCCcEEEEeCChhhHH---HHHHHHHhhcCCceEEEEEEECCCC----cHHHHHHHHHHhcCCCccEE
Q 025260           64 GIGKSFAFQLAKTGLNLVLVGRNPDKLK---DVSDSIQAKYAKTQIKSVVVDFSGD----LDEGVERIKEAIEGLDVGVL  136 (255)
Q Consensus        64 gIG~~la~~la~~G~~V~l~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~~~~~~~~~~id~l  136 (255)
                      -++.+.++.|++.|++|++..|++.+.+   +..+.+.+.  +.+...+.+|+++.    ++++++.+.+.+++   |+|
T Consensus        27 ~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~--G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~---dVL  101 (157)
T 3gxh_A           27 LPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA--GMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK---DVL  101 (157)
T ss_dssp             CCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT--TCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS---CEE
T ss_pred             CCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc--CCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC---CEE
Confidence            4779999999999999999988765432   234444443  45677888899875    34555666665665   499


Q ss_pred             EEecCCC
Q 025260          137 INNVGIS  143 (255)
Q Consensus       137 v~nag~~  143 (255)
                      |||||+.
T Consensus       102 VnnAgg~  108 (157)
T 3gxh_A          102 VHCLANY  108 (157)
T ss_dssp             EECSBSH
T ss_pred             EECCCCC
Confidence            9999974

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.35  E-value=1.1e-06  Score=75.36  Aligned_cols=78  Identities=15%  Similarity=0.245  Sum_probs=56.0

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHhc
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAIE  129 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~  129 (255)
                      .|++|+|+||+||||.++++.+...|++|++++|++++++.+.+++     +..   ..+|..+  +..+   .+.+..+
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~-----g~~---~~~d~~~~~~~~~---~~~~~~~  223 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF-----GFD---DAFNYKEESDLTA---ALKRCFP  223 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS-----CCS---EEEETTSCSCSHH---HHHHHCT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCc---eEEecCCHHHHHH---HHHHHhC
Confidence            4899999999999999999999999999999999988776554322     222   1236553  2333   3333323


Q ss_pred             CCCccEEEEecC
Q 025260          130 GLDVGVLINNVG  141 (255)
Q Consensus       130 ~~~id~lv~nag  141 (255)
                       ..+|++|+|+|
T Consensus       224 -~~~d~vi~~~g  234 (345)
T 2j3h_A          224 -NGIDIYFENVG  234 (345)
T ss_dssp             -TCEEEEEESSC
T ss_pred             -CCCcEEEECCC
Confidence             36889999997

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.35  E-value=8.7e-07  Score=78.86  Aligned_cols=77  Identities=13%  Similarity=0.258  Sum_probs=56.6

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      +|.++||| +||+|++++++|++.|++|++++|+.++.++..+++      ..+..+.+|+++.     +.+.+.+.  +
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~------~~~~~~~~Dv~d~-----~~l~~~l~--~   68 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV------QHSTPISLDVNDD-----AALDAEVA--K   68 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC------TTEEEEECCTTCH-----HHHHHHHT--T
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc------CCceEEEeecCCH-----HHHHHHHc--C
Confidence            68899998 799999999999999999999999987665443221      1256677888764     23334444  4


Q ss_pred             ccEEEEecCCC
Q 025260          133 VGVLINNVGIS  143 (255)
Q Consensus       133 id~lv~nag~~  143 (255)
                      +|++|||++..
T Consensus        69 ~DvVIn~a~~~   79 (450)
T 1ff9_A           69 HDLVISLIPYT   79 (450)
T ss_dssp             SSEEEECCC--
T ss_pred             CcEEEECCccc
Confidence            66999999864

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.34  E-value=2e-06  Score=73.60  Aligned_cols=80  Identities=23%  Similarity=0.271  Sum_probs=60.8

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++|+|+||+++||...+..+...|++|+++++++++++.+.+ +     +...   .+|..+.  +..+.+.+..++.
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l-----ga~~---~~~~~~~--~~~~~~~~~~~~~  212 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L-----GAAY---VIDTSTA--PLYETVMELTNGI  212 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H-----TCSE---EEETTTS--CHHHHHHHHTTTS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C-----CCcE---EEeCCcc--cHHHHHHHHhCCC
Confidence            48999999999999999999988999999999999888765543 2     2221   2354443  4556677666655


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      .+|++|+|+|.
T Consensus       213 g~Dvvid~~g~  223 (340)
T 3gms_A          213 GADAAIDSIGG  223 (340)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCcEEEECCCC
Confidence            78899999984

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.34  E-value=2e-06  Score=73.40  Aligned_cols=80  Identities=19%  Similarity=0.302  Sum_probs=60.3

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++|+|+||+||||...+..+...|++|+++++++++++.+. ++   +  ..   ..+|..++  +..+.+.+..++.
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---g--a~---~~~~~~~~--~~~~~~~~~~~~~  216 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-EY---G--AE---YLINASKE--DILRQVLKFTNGK  216 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HT---T--CS---EEEETTTS--CHHHHHHHHTTTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---C--Cc---EEEeCCCc--hHHHHHHHHhCCC
Confidence            4899999999999999999999999999999999988776432 22   2  22   12344443  5556677766655


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      .+|++++|+|.
T Consensus       217 g~D~vid~~g~  227 (334)
T 3qwb_A          217 GVDASFDSVGK  227 (334)
T ss_dssp             CEEEEEECCGG
T ss_pred             CceEEEECCCh
Confidence            78999999984

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.34  E-value=2.8e-06  Score=73.10  Aligned_cols=79  Identities=18%  Similarity=0.291  Sum_probs=58.7

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++|+|+||+||||.++++.+...|++|+++++++++++.+.+ +   +  ...   .+|..++  +..+.+.+.. ..
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l---G--a~~---~~~~~~~--~~~~~~~~~~-~~  234 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-L---G--AKR---GINYRSE--DFAAVIKAET-GQ  234 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H---T--CSE---EEETTTS--CHHHHHHHHH-SS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---C--CCE---EEeCCch--HHHHHHHHHh-CC
Confidence            48999999999999999999999999999999999888765432 2   2  221   2354443  4445555555 33


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      .+|++|+|+|.
T Consensus       235 g~Dvvid~~g~  245 (353)
T 4dup_A          235 GVDIILDMIGA  245 (353)
T ss_dssp             CEEEEEESCCG
T ss_pred             CceEEEECCCH
Confidence            68899999984

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.33  E-value=1.6e-06  Score=72.36  Aligned_cols=80  Identities=18%  Similarity=0.348  Sum_probs=60.0

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      +++||+++|+|+ ||+|++++..|++.|+ +|++++|+.++.++..+++...++...+..  .+.. +       +.+.+
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~--~~~~-~-------l~~~l  192 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVG--VDAR-G-------IEDVI  192 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEE--ECST-T-------HHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEE--cCHH-H-------HHHHH
Confidence            466999999998 7999999999999999 699999999999999988887655444332  2221 2       22233


Q ss_pred             cCCCccEEEEecCC
Q 025260          129 EGLDVGVLINNVGI  142 (255)
Q Consensus       129 ~~~~id~lv~nag~  142 (255)
                      .+  .|++||+...
T Consensus       193 ~~--~DiVInaTp~  204 (283)
T 3jyo_A          193 AA--ADGVVNATPM  204 (283)
T ss_dssp             HH--SSEEEECSST
T ss_pred             hc--CCEEEECCCC
Confidence            33  4489988764

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=98.29  E-value=4.3e-06  Score=71.66  Aligned_cols=79  Identities=20%  Similarity=0.296  Sum_probs=59.3

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++|+|+||+|+||...+..+...|++|+++++++++++.+.+ +   +  ... .  .|..   ++..+.+.+..++.
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~---g--a~~-v--~~~~---~~~~~~v~~~~~~~  226 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-V---G--ADI-V--LPLE---EGWAKAVREATGGA  226 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H---T--CSE-E--EESS---TTHHHHHHHHTTTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---C--CcE-E--ecCc---hhHHHHHHHHhCCC
Confidence            48999999999999999999999999999999999888764432 2   2  221 1  2333   24556677666665


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      .+|++++|+|.
T Consensus       227 g~Dvvid~~g~  237 (342)
T 4eye_A          227 GVDMVVDPIGG  237 (342)
T ss_dssp             CEEEEEESCC-
T ss_pred             CceEEEECCch
Confidence            78899999984

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.24  E-value=4.4e-06  Score=72.25  Aligned_cols=100  Identities=20%  Similarity=0.269  Sum_probs=66.5

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh---hhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP---DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      ++|++|+|+|| ||+|..+++.+...|++|+++++++   ++.+.+ +++     +..  .+  | .++..   +++.+ 
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~~~-----ga~--~v--~-~~~~~---~~~~~-  242 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-EET-----KTN--YY--N-SSNGY---DKLKD-  242 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-HHH-----TCE--EE--E-CTTCS---HHHHH-
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-HHh-----CCc--ee--c-hHHHH---HHHHH-
Confidence            44999999999 9999999999999999999999987   655332 222     222  12  4 32222   33333 


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHH-HHHhhhhhhCCCcEEEEECCccc
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT-QAVLPGMLKRKKGAIVNIGSGAA  196 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~-~~~lp~~~~~~~g~iv~vsS~~~  196 (255)
                      .+ ..+|++|+++|...                           .+ +..++.+.  +.|++|+++...+
T Consensus       243 ~~-~~~d~vid~~g~~~---------------------------~~~~~~~~~l~--~~G~iv~~g~~~~  282 (366)
T 2cdc_A          243 SV-GKFDVIIDATGADV---------------------------NILGNVIPLLG--RNGVLGLFGFSTS  282 (366)
T ss_dssp             HH-CCEEEEEECCCCCT---------------------------HHHHHHGGGEE--EEEEEEECSCCCS
T ss_pred             hC-CCCCEEEECCCChH---------------------------HHHHHHHHHHh--cCCEEEEEecCCC
Confidence            23 36789999998521                           12 44555553  4589999886543

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.18  E-value=2.8e-06  Score=75.83  Aligned_cols=80  Identities=18%  Similarity=0.277  Sum_probs=56.5

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHc-CCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~-G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      .+++++.++|+|+ ||+|++++..|++. |++|++.+|+.++.++..++    . +  +..+.+|+.+.     +.+.+.
T Consensus        19 ~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~----~-~--~~~~~~D~~d~-----~~l~~~   85 (467)
T 2axq_A           19 GRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP----S-G--SKAISLDVTDD-----SALDKV   85 (467)
T ss_dssp             ----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG----G-T--CEEEECCTTCH-----HHHHHH
T ss_pred             cCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh----c-C--CcEEEEecCCH-----HHHHHH
Confidence            3466899999997 99999999999998 78999999998877665432    1 2  34456777653     233334


Q ss_pred             hcCCCccEEEEecCCC
Q 025260          128 IEGLDVGVLINNVGIS  143 (255)
Q Consensus       128 ~~~~~id~lv~nag~~  143 (255)
                      +.  ++|+|||+++..
T Consensus        86 l~--~~DvVIn~tp~~   99 (467)
T 2axq_A           86 LA--DNDVVISLIPYT   99 (467)
T ss_dssp             HH--TSSEEEECSCGG
T ss_pred             Hc--CCCEEEECCchh
Confidence            44  456999999864

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=98.15  E-value=1.7e-05  Score=67.95  Aligned_cols=79  Identities=15%  Similarity=0.207  Sum_probs=57.4

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++|+|+|+ |++|...++.+...|+ +|+++++++++++.+. ++     +...   ..|..++  +..+++.+..++
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~-----Ga~~---~~~~~~~--~~~~~v~~~~~g  234 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KV-----GADY---VINPFEE--DVVKEVMDITDG  234 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HH-----TCSE---EECTTTS--CHHHHHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-----CCCE---EECCCCc--CHHHHHHHHcCC
Confidence            6999999999 9999999999989999 9999999987765443 22     2211   1344332  445566665554


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                      ..+|++|+++|.
T Consensus       235 ~g~D~vid~~g~  246 (348)
T 2d8a_A          235 NGVDVFLEFSGA  246 (348)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            468899999984

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.12  E-value=6.9e-06  Score=60.93  Aligned_cols=74  Identities=15%  Similarity=0.250  Sum_probs=53.7

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      +++++|+|+ |.+|.++++.|.++|++|++++++++..++..+    .  .  ...+..|.++.  +.   + +..+-.+
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~--~--~~~~~gd~~~~--~~---l-~~~~~~~   70 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----E--G--FDAVIADPTDE--SF---Y-RSLDLEG   70 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T--T--CEEEECCTTCH--HH---H-HHSCCTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----C--C--CcEEECCCCCH--HH---H-HhCCccc
Confidence            567999998 779999999999999999999999887665442    1  2  35667788764  22   2 2223225


Q ss_pred             ccEEEEecC
Q 025260          133 VGVLINNVG  141 (255)
Q Consensus       133 id~lv~nag  141 (255)
                      .|++|.+.+
T Consensus        71 ~d~vi~~~~   79 (141)
T 3llv_A           71 VSAVLITGS   79 (141)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEEecC
Confidence            668887665

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.12  E-value=1e-05  Score=69.50  Aligned_cols=79  Identities=10%  Similarity=0.103  Sum_probs=57.7

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      +++++|+||+|+||...++.+...|++|+++++++++++.+. ++   +  ...   ..|..++  +..+.+.+..++..
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~---G--a~~---~~~~~~~--~~~~~v~~~~~~~g  233 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI---G--AAH---VLNEKAP--DFEATLREVMKAEQ  233 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH---T--CSE---EEETTST--THHHHHHHHHHHHC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---C--CCE---EEECCcH--HHHHHHHHHhcCCC
Confidence            489999999999999999999999999999999998876553 22   2  221   2344432  45556666554335


Q ss_pred             ccEEEEecCC
Q 025260          133 VGVLINNVGI  142 (255)
Q Consensus       133 id~lv~nag~  142 (255)
                      +|++++++|.
T Consensus       234 ~D~vid~~g~  243 (349)
T 3pi7_A          234 PRIFLDAVTG  243 (349)
T ss_dssp             CCEEEESSCH
T ss_pred             CcEEEECCCC
Confidence            7799999984

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=98.11  E-value=1.1e-05  Score=69.64  Aligned_cols=78  Identities=17%  Similarity=0.153  Sum_probs=56.1

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++|+|+||+|+||...++.+...|++|+++++++++++.+.+    .  +...   .+|..++  +..+.+.+..+ .
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~--Ga~~---~~~~~~~--~~~~~~~~~~~-~  230 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS----L--GCDR---PINYKTE--PVGTVLKQEYP-E  230 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----T--TCSE---EEETTTS--CHHHHHHHHCT-T
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----c--CCcE---EEecCCh--hHHHHHHHhcC-C
Confidence            48999999999999999999999999999999999877655432    2  2221   2344432  33444544433 3


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      .+|++|+|+|
T Consensus       231 g~D~vid~~g  240 (362)
T 2c0c_A          231 GVDVVYESVG  240 (362)
T ss_dssp             CEEEEEECSC
T ss_pred             CCCEEEECCC
Confidence            6889999997

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.10  E-value=1.6e-05  Score=67.24  Aligned_cols=84  Identities=18%  Similarity=0.318  Sum_probs=60.1

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCC---hhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN---PDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERI  124 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~---~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  124 (255)
                      .+++||+++|+|+ ||.|++++..|++.|+ +|.+++|+   .++.++..+++.+..+ ..+.  ..+..+.     +.+
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~-~~v~--~~~~~~l-----~~~  214 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTD-CVVT--VTDLADQ-----HAF  214 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSS-CEEE--EEETTCH-----HHH
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccC-cceE--EechHhh-----hhh
Confidence            4567999999997 8999999999999998 89999999   8888888888876542 2222  2343321     122


Q ss_pred             HHHhcCCCccEEEEecCCC
Q 025260          125 KEAIEGLDVGVLINNVGIS  143 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~  143 (255)
                      .+.+.+  .|++||+....
T Consensus       215 ~~~l~~--~DiIINaTp~G  231 (312)
T 3t4e_A          215 TEALAS--ADILTNGTKVG  231 (312)
T ss_dssp             HHHHHH--CSEEEECSSTT
T ss_pred             HhhccC--ceEEEECCcCC
Confidence            333343  44899987654

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=98.09  E-value=1.9e-05  Score=67.65  Aligned_cols=76  Identities=17%  Similarity=0.258  Sum_probs=55.4

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++|+|+||+|+||...++.+...|++|+++ +++++++.+ +++     +...    +| .++  +..+.+.+..++.
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l-----Ga~~----i~-~~~--~~~~~~~~~~~~~  215 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL-----GATP----ID-ASR--EPEDYAAEHTAGQ  215 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH-----TSEE----EE-TTS--CHHHHHHHHHTTS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc-----CCCE----ec-cCC--CHHHHHHHHhcCC
Confidence            48999999999999999999999999999999 777665533 222     2322    34 322  3445566655655


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      .+|++++++|
T Consensus       216 g~D~vid~~g  225 (343)
T 3gaz_A          216 GFDLVYDTLG  225 (343)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            7889999998

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.08  E-value=1e-05  Score=67.13  Aligned_cols=78  Identities=22%  Similarity=0.319  Sum_probs=56.6

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      .++++|+++|+|+ ||+|++++..|++.|++|++.+|+.++.++..+++...+   .+..  .|.. +       +.+  
T Consensus       115 ~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~---~~~~--~~~~-~-------~~~--  178 (272)
T 1p77_A          115 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG---NIQA--VSMD-S-------IPL--  178 (272)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS---CEEE--EEGG-G-------CCC--
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC---CeEE--eeHH-H-------hcc--
Confidence            3466999999998 799999999999999999999999998888877764321   2221  2321 1       101  


Q ss_pred             cCCCccEEEEecCCCC
Q 025260          129 EGLDVGVLINNVGISY  144 (255)
Q Consensus       129 ~~~~id~lv~nag~~~  144 (255)
                      +  +.|++||+++...
T Consensus       179 ~--~~DivIn~t~~~~  192 (272)
T 1p77_A          179 Q--TYDLVINATSAGL  192 (272)
T ss_dssp             S--CCSEEEECCCC--
T ss_pred             C--CCCEEEECCCCCC
Confidence            2  5669999999753

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.06  E-value=4.3e-06  Score=61.81  Aligned_cols=75  Identities=17%  Similarity=0.269  Sum_probs=51.6

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH-hcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA-IEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~~  130 (255)
                      +++.++|+|+ |++|..+++.|.+.|++|++++|+++..++..    +.  .  ...+..|.++.     +.+.+. .+ 
T Consensus         5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~----~~--~--~~~~~~d~~~~-----~~l~~~~~~-   69 (144)
T 2hmt_A            5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SY--A--THAVIANATEE-----NELLSLGIR-   69 (144)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT----TT--C--SEEEECCTTCH-----HHHHTTTGG-
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----Hh--C--CEEEEeCCCCH-----HHHHhcCCC-
Confidence            4678999998 99999999999999999999999976654321    11  1  23455666542     222222 33 


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                       +.|++|++++.
T Consensus        70 -~~d~vi~~~~~   80 (144)
T 2hmt_A           70 -NFEYVIVAIGA   80 (144)
T ss_dssp             -GCSEEEECCCS
T ss_pred             -CCCEEEECCCC
Confidence             45699988863

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.99  E-value=9.3e-06  Score=72.10  Aligned_cols=86  Identities=19%  Similarity=0.181  Sum_probs=57.0

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC-----------cHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD-----------LDEG  120 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-----------~~~~  120 (255)
                      .|++|+|+||+||||...+..+...|++|+++++++++++.+.    +.+....+..-+.|..+.           .++.
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~----~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  295 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR----ALGCDLVINRAELGITDDIADDPRRVVETGRKL  295 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----hcCCCEEEecccccccccccccccccchhhhHH
Confidence            5899999999999999999999999999999999888776542    222111111111111110           1223


Q ss_pred             HHHHHHHhcCCCccEEEEecCC
Q 025260          121 VERIKEAIEGLDVGVLINNVGI  142 (255)
Q Consensus       121 ~~~~~~~~~~~~id~lv~nag~  142 (255)
                      .+.+.+.. +..+|++++|+|.
T Consensus       296 ~~~v~~~~-g~g~Dvvid~~G~  316 (447)
T 4a0s_A          296 AKLVVEKA-GREPDIVFEHTGR  316 (447)
T ss_dssp             HHHHHHHH-SSCCSEEEECSCH
T ss_pred             HHHHHHHh-CCCceEEEECCCc
Confidence            56666666 3367899999983

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.97  E-value=4e-05  Score=65.63  Aligned_cols=78  Identities=13%  Similarity=0.141  Sum_probs=57.0

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++|+|+||+|++|...++.+...|++|+++++++++++.+.+ +   +  ...   .+|..+   +..+.+.+. +..
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l---G--a~~---vi~~~~---~~~~~~~~~-~~~  216 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-M---G--ADI---VLNHKE---SLLNQFKTQ-GIE  216 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-H---T--CSE---EECTTS---CHHHHHHHH-TCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---C--CcE---EEECCc---cHHHHHHHh-CCC
Confidence            58999999999999999999999999999999999887665433 2   2  221   123332   344555555 444


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      .+|++++++|.
T Consensus       217 g~Dvv~d~~g~  227 (346)
T 3fbg_A          217 LVDYVFCTFNT  227 (346)
T ss_dssp             CEEEEEESSCH
T ss_pred             CccEEEECCCc
Confidence            68899999874

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.95  E-value=2.2e-05  Score=64.22  Aligned_cols=83  Identities=19%  Similarity=0.280  Sum_probs=62.6

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh-------------------hhHHHHHHHHHhhcCCceEEEE
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKSV  109 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~  109 (255)
                      ++++++|+|.|+ ||+|.++++.|++.|. ++.++|++.                   .+.+...+.+.+.++..++..+
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  106 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  106 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence            466899999996 6999999999999997 899999997                   7888888888888777776665


Q ss_pred             EEECCCCcHHHHHHHHHHhcCCCccEEEEecC
Q 025260          110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNVG  141 (255)
Q Consensus       110 ~~d~~~~~~~~~~~~~~~~~~~~id~lv~nag  141 (255)
                      ..++.+   +   .+.+.+.+  .|++|.+.+
T Consensus       107 ~~~~~~---~---~~~~~~~~--~DvVi~~~d  130 (249)
T 1jw9_B          107 NALLDD---A---ELAALIAE--HDLVLDCTD  130 (249)
T ss_dssp             CSCCCH---H---HHHHHHHT--SSEEEECCS
T ss_pred             eccCCH---h---HHHHHHhC--CCEEEEeCC
Confidence            544442   1   23334454  458887653

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.93  E-value=0.00013  Score=62.07  Aligned_cols=117  Identities=17%  Similarity=0.286  Sum_probs=71.6

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcC--CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G--~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      ...++||||+|.+|..++..|+++|  .+|++.+++++  +....++........+..    ..+.     +...+.+.+
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t-----~d~~~al~g   76 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQ-----QQLEAALTG   76 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESH-----HHHHHHHTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCC-----CCHHHHcCC
Confidence            3579999999999999999999998  78999998876  333334443211112211    1111     234555664


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECC
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGS  193 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS  193 (255)
                        .|++|++||.....     ..+.   ...+..|+.+...+.+.+...   ..++.++++|.
T Consensus        77 --aDvVi~~ag~~~~~-----g~~r---~dl~~~N~~~~~~i~~~i~~~---~p~~~viv~SN  126 (326)
T 1smk_A           77 --MDLIIVPAGVPRKP-----GMTR---DDLFKINAGIVKTLCEGIAKC---CPRAIVNLISN  126 (326)
T ss_dssp             --CSEEEECCCCCCCS-----SCCC---SHHHHHHHHHHHHHHHHHHHH---CTTSEEEECCS
T ss_pred             --CCEEEEcCCcCCCC-----CCCH---HHHHHHHHHHHHHHHHHHHhh---CCCeEEEEECC
Confidence              45999999975321     1122   234677888777777765542   23455555443

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.90  E-value=5.8e-05  Score=64.43  Aligned_cols=77  Identities=22%  Similarity=0.309  Sum_probs=55.4

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++|+|+|| ||+|...++.+...|++|+.++|++++++.+. +   .  +...   .+|..++  +..+.+.+..+  
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~---l--Ga~~---~~d~~~~--~~~~~~~~~~~--  229 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-E---L--GADL---VVNPLKE--DAAKFMKEKVG--  229 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-H---T--TCSE---EECTTTS--CHHHHHHHHHS--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-H---C--CCCE---EecCCCc--cHHHHHHHHhC--
Confidence            4899999999 88999999999999999999999988776543 2   2  2221   2455543  33444544443  


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      .+|++|+++|.
T Consensus       230 ~~d~vid~~g~  240 (339)
T 1rjw_A          230 GVHAAVVTAVS  240 (339)
T ss_dssp             SEEEEEESSCC
T ss_pred             CCCEEEECCCC
Confidence            57899999984

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.89  E-value=3.9e-05  Score=66.27  Aligned_cols=75  Identities=15%  Similarity=0.231  Sum_probs=53.9

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++|+|+|+ |+||...++.+...|++|+++++++++++...+++     +...   .+|..+.     +.+.+..+  
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l-----Ga~~---v~~~~~~-----~~~~~~~~--  250 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF-----GADS---FLVSRDQ-----EQMQAAAG--  250 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS-----CCSE---EEETTCH-----HHHHHTTT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----CCce---EEeccCH-----HHHHHhhC--
Confidence            5899999996 99999999999999999999999988876554332     2221   2344432     23333333  


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      .+|++|+++|.
T Consensus       251 ~~D~vid~~g~  261 (366)
T 1yqd_A          251 TLDGIIDTVSA  261 (366)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCCEEEECCCc
Confidence            57899999985

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.87  E-value=4.6e-05  Score=67.82  Aligned_cols=82  Identities=21%  Similarity=0.285  Sum_probs=59.1

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC---------------
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD---------------  116 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---------------  116 (255)
                      .|++|+|+||+|++|...+..+...|++|+++++++++++.+ +++   +  ... .  +|..+.               
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l---G--a~~-v--i~~~~~d~~~~~~~~~~~~~~  298 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM---G--AEA-I--IDRNAEGYRFWKDENTQDPKE  298 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH---T--CCE-E--EETTTTTCCSEEETTEECHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh---C--CcE-E--EecCcCcccccccccccchHH
Confidence            489999999999999999998889999999999988776654 232   2  211 1  222221               


Q ss_pred             cHHHHHHHHHHhcCCCccEEEEecCC
Q 025260          117 LDEGVERIKEAIEGLDVGVLINNVGI  142 (255)
Q Consensus       117 ~~~~~~~~~~~~~~~~id~lv~nag~  142 (255)
                      .++..+.+.+..++..+|+++.++|.
T Consensus       299 ~~~~~~~i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          299 WKRFGKRIRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             HHHHHHHHHHHHTSCCEEEEEECSCH
T ss_pred             HHHHHHHHHHHhCCCCCcEEEEcCCc
Confidence            13445677776666678999999883

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.85  E-value=2.5e-05  Score=65.58  Aligned_cols=78  Identities=15%  Similarity=0.260  Sum_probs=56.4

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      ++++++++|+|+ ||+|++++..|++.|+ +|++.+|+.++.++..+++.... . .+    .+        .+.+.+.+
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~-~-~~----~~--------~~~~~~~~  202 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERR-S-AY----FS--------LAEAETRL  202 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSS-C-CE----EC--------HHHHHHTG
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhcc-C-ce----ee--------HHHHHhhh
Confidence            456999999998 7999999999999998 99999999988877766542211 0 11    11        12344455


Q ss_pred             cCCCccEEEEecCCCC
Q 025260          129 EGLDVGVLINNVGISY  144 (255)
Q Consensus       129 ~~~~id~lv~nag~~~  144 (255)
                      .+  .|++||+.+...
T Consensus       203 ~~--aDivIn~t~~~~  216 (297)
T 2egg_A          203 AE--YDIIINTTSVGM  216 (297)
T ss_dssp             GG--CSEEEECSCTTC
T ss_pred             cc--CCEEEECCCCCC
Confidence            54  559999998753

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.80  E-value=8.8e-05  Score=64.03  Aligned_cols=77  Identities=16%  Similarity=0.204  Sum_probs=54.5

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      +++++|+|+|+ ||+|+++++.+...|++|++++|++++++...+....     .+..   +..+.     +.+.+.+.+
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~-----~~~~---~~~~~-----~~~~~~~~~  230 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS-----RVEL---LYSNS-----AEIETAVAE  230 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG-----GSEE---EECCH-----HHHHHHHHT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc-----eeEe---eeCCH-----HHHHHHHcC
Confidence            55799999999 9999999999999999999999999887766543321     1111   11221     123334443


Q ss_pred             CCccEEEEecCCC
Q 025260          131 LDVGVLINNVGIS  143 (255)
Q Consensus       131 ~~id~lv~nag~~  143 (255)
                        .|++|++++..
T Consensus       231 --~DvVI~~~~~~  241 (361)
T 1pjc_A          231 --ADLLIGAVLVP  241 (361)
T ss_dssp             --CSEEEECCCCT
T ss_pred             --CCEEEECCCcC
Confidence              55999999864

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.76  E-value=0.00017  Score=62.17  Aligned_cols=78  Identities=17%  Similarity=0.204  Sum_probs=57.4

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++|+|+| +|++|...+..+...|++|+++++++++++.+ +++   +  ... .  +| .+ .++..+.+.+..++.
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l---G--a~~-v--i~-~~-~~~~~~~v~~~~~g~  256 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FAL---G--ADH-G--IN-RL-EEDWVERVYALTGDR  256 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---T--CSE-E--EE-TT-TSCHHHHHHHHHTTC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHc---C--CCE-E--Ec-CC-cccHHHHHHHHhCCC
Confidence            489999999 89999999988888999999999998877653 222   2  221 2  24 22 124556677666665


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      .+|++++++|
T Consensus       257 g~D~vid~~g  266 (363)
T 3uog_A          257 GADHILEIAG  266 (363)
T ss_dssp             CEEEEEEETT
T ss_pred             CceEEEECCC
Confidence            7889999998

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.75  E-value=0.00015  Score=61.39  Aligned_cols=149  Identities=19%  Similarity=0.232  Sum_probs=86.9

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCC--cEEEEeC--ChhhHHHHHHHHHhhcCC--ceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGL--NLVLVGR--NPDKLKDVSDSIQAKYAK--TQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~--~V~l~~r--~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      .++||||+|.+|..++..|+.+|.  ++.+.++  ++++++....++....+.  ........+  |       .+.+.+
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~--d-------~l~~al   72 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES--D-------ENLRII   72 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE--T-------TCGGGG
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC--c-------chHHHh
Confidence            589999999999999999998884  5899998  765555444444432111  112222222  1       123344


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc------CCC
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI------PSD  202 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~------~~~  202 (255)
                      .  +.|++|+.||.....     ..+.   ...++.|+.....+.+++..+    .++.++++|.......      .+.
T Consensus        73 ~--gaD~Vi~~Ag~~~~~-----g~~r---~dl~~~N~~i~~~i~~~i~~~----~~~~vlv~SNPv~~~t~~~~k~~~~  138 (313)
T 1hye_A           73 D--ESDVVIITSGVPRKE-----GMSR---MDLAKTNAKIVGKYAKKIAEI----CDTKIFVITNPVDVMTYKALVDSKF  138 (313)
T ss_dssp             T--TCSEEEECCSCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHH----CCCEEEECSSSHHHHHHHHHHHHCC
T ss_pred             C--CCCEEEECCCCCCCC-----CCcH---HHHHHHHHHHHHHHHHHHHHh----CCeEEEEecCcHHHHHHHHHHhhCc
Confidence            4  455999999975321     2233   345788888887777776542    2455555554332211      123


Q ss_pred             CCchhchH-HHHHHHHHHHHHHHHH
Q 025260          203 PLYSVYAA-TKAYIDQFSRSLYVEY  226 (255)
Q Consensus       203 ~~~~~Y~a-sK~al~~~~~~l~~e~  226 (255)
                      |....++. +..--..+...+++.+
T Consensus       139 p~~rviG~gt~LD~~r~~~~la~~l  163 (313)
T 1hye_A          139 ERNQVFGLGTHLDSLRFKVAIAKFF  163 (313)
T ss_dssp             CTTSEEECTTHHHHHHHHHHHHHHH
T ss_pred             ChhcEEEeCccHHHHHHHHHHHHHh
Confidence            33344555 4444555566666665

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.72  E-value=0.00042  Score=59.78  Aligned_cols=80  Identities=20%  Similarity=0.209  Sum_probs=54.9

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++|+|+|+ |++|...++.+...|+ +|+.+++++++++.+. ++     +... .  +|..+..++..+.+.+..++
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~~-v--i~~~~~~~~~~~~v~~~~~~  259 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EF-----GATE-C--INPQDFSKPIQEVLIEMTDG  259 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HH-----TCSE-E--ECGGGCSSCHHHHHHHHTTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc-----CCce-E--eccccccccHHHHHHHHhCC
Confidence            4899999996 9999999988888999 7999999988876543 33     2221 1  23332112344555555444


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                       .+|++++++|.
T Consensus       260 -g~D~vid~~g~  270 (373)
T 2fzw_A          260 -GVDYSFECIGN  270 (373)
T ss_dssp             -CBSEEEECSCC
T ss_pred             -CCCEEEECCCc
Confidence             68899999874

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.71  E-value=0.00046  Score=58.00  Aligned_cols=112  Identities=13%  Similarity=0.194  Sum_probs=70.4

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCC--cEEEEeC--ChhhHHHHHHHHHhhc---CCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGL--NLVLVGR--NPDKLKDVSDSIQAKY---AKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~--~V~l~~r--~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      .++||||+|.+|.+++..|+..|.  ++.+.|+  ++++++....++....   .+.++..   +  +         .+.
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~---~--~---------~~a   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ---G--G---------YED   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE---C--C---------GGG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe---C--C---------HHH
Confidence            589999999999999999998885  6999999  7766655455555431   1222221   1  1         122


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECC
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGS  193 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS  193 (255)
                      +.  +.|++|+.||.....     ..+.+   ..+..|+.....+.+.+..+   ..++.++++|.
T Consensus        68 ~~--~aDvVi~~ag~~~~~-----g~~r~---dl~~~N~~i~~~i~~~i~~~---~p~~~viv~SN  120 (303)
T 1o6z_A           68 TA--GSDVVVITAGIPRQP-----GQTRI---DLAGDNAPIMEDIQSSLDEH---NDDYISLTTSN  120 (303)
T ss_dssp             GT--TCSEEEECCCCCCCT-----TCCHH---HHHHHHHHHHHHHHHHHHTT---CSCCEEEECCS
T ss_pred             hC--CCCEEEEcCCCCCCC-----CCCHH---HHHHHHHHHHHHHHHHHHHH---CCCcEEEEeCC
Confidence            34  456999999975321     22333   34778888777776665432   23455555443

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.70  E-value=0.0002  Score=61.66  Aligned_cols=83  Identities=22%  Similarity=0.334  Sum_probs=59.6

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCc-EEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~-V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++|+|+|+ |++|...+.-+...|++ |+++++++++++.+. ++ .   . .+..+..|.. +.++..+++.+..++
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-~---~-~~~~~~~~~~-~~~~~~~~v~~~t~g  250 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EI-C---P-EVVTHKVERL-SAEESAKKIVESFGG  250 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-HH-C---T-TCEEEECCSC-CHHHHHHHHHHHTSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-c---h-hccccccccc-chHHHHHHHHHHhCC
Confidence            4889999998 99999999888889997 999999988776543 22 1   1 2223333322 234666778877766


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                      ..+|+++.++|.
T Consensus       251 ~g~Dvvid~~g~  262 (363)
T 3m6i_A          251 IEPAVALECTGV  262 (363)
T ss_dssp             CCCSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            678899999874

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.70  E-value=0.00018  Score=61.67  Aligned_cols=80  Identities=24%  Similarity=0.228  Sum_probs=54.4

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc--
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE--  129 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~--  129 (255)
                      .|++|+|+|+ |++|...++.+...|++|+++++++++++.+. +   .+  .. ..  .|..+. ++..+++.+..+  
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~---lG--a~-~~--~~~~~~-~~~~~~i~~~~~~~  236 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-N---CG--AD-VT--LVVDPA-KEEESSIIERIRSA  236 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-H---TT--CS-EE--EECCTT-TSCHHHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-H---hC--CC-EE--EcCccc-ccHHHHHHHHhccc
Confidence            4899999997 89999999888889999999999988766443 2   22  22 22  233320 133345555544  


Q ss_pred             -CCCccEEEEecCC
Q 025260          130 -GLDVGVLINNVGI  142 (255)
Q Consensus       130 -~~~id~lv~nag~  142 (255)
                       +..+|++++++|.
T Consensus       237 ~g~g~D~vid~~g~  250 (352)
T 1e3j_A          237 IGDLPNVTIDCSGN  250 (352)
T ss_dssp             SSSCCSEEEECSCC
T ss_pred             cCCCCCEEEECCCC
Confidence             3357799999874

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.68  E-value=0.00021  Score=53.63  Aligned_cols=76  Identities=17%  Similarity=0.287  Sum_probs=51.2

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh-hhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH-hcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA-IEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~~  130 (255)
                      ++.++|.|+ |.+|..++++|.+.|++|+++++++ +..+...+..     ...+..+..|.++.     +.+.+. +. 
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~-----~~l~~a~i~-   70 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDS-----SVLKKAGID-   70 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSH-----HHHHHHTTT-
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCH-----HHHHHcChh-
Confidence            466888886 9999999999999999999999984 4444333222     12356677887764     223332 34 


Q ss_pred             CCccEEEEecC
Q 025260          131 LDVGVLINNVG  141 (255)
Q Consensus       131 ~~id~lv~nag  141 (255)
                       +.|.+|.+.+
T Consensus        71 -~ad~vi~~~~   80 (153)
T 1id1_A           71 -RCRAILALSD   80 (153)
T ss_dssp             -TCSEEEECSS
T ss_pred             -hCCEEEEecC
Confidence             4458876653

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.67  E-value=0.00014  Score=53.23  Aligned_cols=74  Identities=24%  Similarity=0.401  Sum_probs=49.7

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH-hcCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA-IEGL  131 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~~~  131 (255)
                      ++.++|+|+ |.+|..+++.|.+.|++|++++|+++..++..+    .. +  +..+..|..+.     +.+.+. ..  
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~----~~-~--~~~~~~d~~~~-----~~l~~~~~~--   68 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA----EI-D--ALVINGDCTKI-----KTLEDAGIE--   68 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HC-S--SEEEESCTTSH-----HHHHHTTTT--
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH----hc-C--cEEEEcCCCCH-----HHHHHcCcc--
Confidence            467899987 999999999999999999999999876654432    11 1  23445565542     122222 23  


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      +.|++|.+.+
T Consensus        69 ~~d~vi~~~~   78 (140)
T 1lss_A           69 DADMYIAVTG   78 (140)
T ss_dssp             TCSEEEECCS
T ss_pred             cCCEEEEeeC
Confidence            4668988764

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.67  E-value=8.6e-05  Score=61.51  Aligned_cols=49  Identities=16%  Similarity=0.252  Sum_probs=43.6

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQ   98 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~   98 (255)
                      .+++||+++|+|+ ||+|++++..|++.|+ +|.+.+|+.++.++..+++.
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~  165 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELD  165 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHC
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc
Confidence            4567999999998 6999999999999996 99999999999888877764

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.66  E-value=9e-05  Score=62.14  Aligned_cols=42  Identities=21%  Similarity=0.291  Sum_probs=38.1

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~   93 (255)
                      .|++++|+||+|++|...++.+...|++|+.+++++++++.+
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  166 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP  166 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            489999999999999999999999999999999998877654

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.63  E-value=9.4e-05  Score=61.58  Aligned_cols=51  Identities=16%  Similarity=0.221  Sum_probs=45.0

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhh
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAK  100 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~  100 (255)
                      .+++||+++|+|+ ||+|++++..|++.|+ +|.+.+|+.++.++..+++...
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~  173 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAY  173 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGG
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhcc
Confidence            4567999999998 6999999999999996 9999999999998888877653

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.62  E-value=0.00017  Score=62.55  Aligned_cols=78  Identities=18%  Similarity=0.209  Sum_probs=54.6

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      .+.|++|+|+|+ |+||.++++.+...|++|++.+|++++++...+.+     +..+   ..+..+.     +.+.+.+.
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~-----g~~~---~~~~~~~-----~~l~~~l~  230 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF-----CGRI---HTRYSSA-----YELEGAVK  230 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----TTSS---EEEECCH-----HHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc-----CCee---EeccCCH-----HHHHHHHc
Confidence            366999999998 99999999999999999999999988776654332     1111   1222221     12333344


Q ss_pred             CCCccEEEEecCCC
Q 025260          130 GLDVGVLINNVGIS  143 (255)
Q Consensus       130 ~~~id~lv~nag~~  143 (255)
                      +  .|++|++++..
T Consensus       231 ~--aDvVi~~~~~p  242 (377)
T 2vhw_A          231 R--ADLVIGAVLVP  242 (377)
T ss_dssp             H--CSEEEECCCCT
T ss_pred             C--CCEEEECCCcC
Confidence            3  45999998853

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.62  E-value=0.00024  Score=61.41  Aligned_cols=77  Identities=21%  Similarity=0.254  Sum_probs=51.8

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++|+|+||+|++|...++.+...|++|+.++ ++++.+.+ ++   .+  ...   .+|..++  +..+++.+.   .
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~-~~---lG--a~~---v~~~~~~--~~~~~~~~~---~  247 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELV-RK---LG--ADD---VIDYKSG--SVEEQLKSL---K  247 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH-HH---TT--CSE---EEETTSS--CHHHHHHTS---C
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHH-HH---cC--CCE---EEECCch--HHHHHHhhc---C
Confidence            489999999999999999988888999999988 44554432 22   22  221   2344432  333444432   2


Q ss_pred             CccEEEEecCCC
Q 025260          132 DVGVLINNVGIS  143 (255)
Q Consensus       132 ~id~lv~nag~~  143 (255)
                      .+|++|+++|..
T Consensus       248 g~D~vid~~g~~  259 (375)
T 2vn8_A          248 PFDFILDNVGGS  259 (375)
T ss_dssp             CBSEEEESSCTT
T ss_pred             CCCEEEECCCCh
Confidence            577999999853

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.61  E-value=0.00015  Score=62.62  Aligned_cols=79  Identities=18%  Similarity=0.303  Sum_probs=54.1

Q ss_pred             cccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHH
Q 025260           47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKE  126 (255)
Q Consensus        47 ~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  126 (255)
                      .++.-+.+.|+|.|| |++|+.+|+.|++ .++|.+.+|+.+++++..+         ....+.+|+.|.     +.+.+
T Consensus        10 ~~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~---------~~~~~~~d~~d~-----~~l~~   73 (365)
T 3abi_A           10 HHIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE---------FATPLKVDASNF-----DKLVE   73 (365)
T ss_dssp             ------CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT---------TSEEEECCTTCH-----HHHHH
T ss_pred             ccccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc---------cCCcEEEecCCH-----HHHHH
Confidence            445544567999998 9999999999976 5799999999887765421         234567787764     45566


Q ss_pred             HhcCCCccEEEEecCCC
Q 025260          127 AIEGLDVGVLINNVGIS  143 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~  143 (255)
                      .+.+.  |+|||+++..
T Consensus        74 ~~~~~--DvVi~~~p~~   88 (365)
T 3abi_A           74 VMKEF--ELVIGALPGF   88 (365)
T ss_dssp             HHTTC--SEEEECCCGG
T ss_pred             HHhCC--CEEEEecCCc
Confidence            66654  4999988754

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.59  E-value=0.00018  Score=61.86  Aligned_cols=86  Identities=24%  Similarity=0.234  Sum_probs=55.4

Q ss_pred             CC-cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC-cHHHHHHHHHHh-
Q 025260           52 YG-SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD-LDEGVERIKEAI-  128 (255)
Q Consensus        52 ~g-k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~-  128 (255)
                      .| ++|+|+||+|++|...+.-+...|++|++++++.+++++..+.+++.+  ... .+  |..+. .++..+++.+.. 
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lG--a~~-vi--~~~~~~~~~~~~~i~~~t~  240 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELG--ATQ-VI--TEDQNNSREFGPTIKEWIK  240 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHT--CSE-EE--EHHHHHCGGGHHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcC--CeE-EE--ecCccchHHHHHHHHHHhh
Confidence            47 999999999999999888877899999999887766433333333333  221 12  22110 023445555544 


Q ss_pred             -cCCCccEEEEecCC
Q 025260          129 -EGLDVGVLINNVGI  142 (255)
Q Consensus       129 -~~~~id~lv~nag~  142 (255)
                       ++..+|+++.++|.
T Consensus       241 ~~~~g~Dvvid~~G~  255 (364)
T 1gu7_A          241 QSGGEAKLALNCVGG  255 (364)
T ss_dssp             HHTCCEEEEEESSCH
T ss_pred             ccCCCceEEEECCCc
Confidence             33368899999873

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.56  E-value=0.00015  Score=61.93  Aligned_cols=77  Identities=25%  Similarity=0.319  Sum_probs=54.1

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++|+|+|| |++|...++.+...|+ +|+.+++++++++.+.+ + .    .    ...|..++  +..+.+.+.. .
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l-a----~----~v~~~~~~--~~~~~~~~~~-~  229 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y-A----D----RLVNPLEE--DLLEVVRRVT-G  229 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T-C----S----EEECTTTS--CHHHHHHHHH-S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-H----H----hccCcCcc--CHHHHHHHhc-C
Confidence            5899999999 9999999998888999 99999999876553321 1 1    1    12344332  3444555444 3


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                      ..+|++|+++|.
T Consensus       230 ~g~D~vid~~g~  241 (343)
T 2dq4_A          230 SGVEVLLEFSGN  241 (343)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            368899999984

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.56  E-value=0.00043  Score=57.74  Aligned_cols=65  Identities=14%  Similarity=0.226  Sum_probs=55.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh------------------hhHHHHHHHHHhhcCCceEEEEE
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP------------------DKLKDVSDSIQAKYAKTQIKSVV  110 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~------------------~~~~~~~~~~~~~~~~~~~~~~~  110 (255)
                      ++++++|+|.|+ ||+|.++++.|++.|. ++.++|.+.                  .+.+.+.+.+++.+|..++..+.
T Consensus        33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~  111 (292)
T 3h8v_A           33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHN  111 (292)
T ss_dssp             GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEec
Confidence            466899999986 6999999999999996 899999876                  67778888898888888888877


Q ss_pred             EECCC
Q 025260          111 VDFSG  115 (255)
Q Consensus       111 ~d~~~  115 (255)
                      .++++
T Consensus       112 ~~l~~  116 (292)
T 3h8v_A          112 YNITT  116 (292)
T ss_dssp             CCTTS
T ss_pred             ccCCc
Confidence            77664

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.55  E-value=0.00051  Score=59.00  Aligned_cols=78  Identities=24%  Similarity=0.337  Sum_probs=54.8

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHc-CCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~-G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++|+|+|| |++|...+.-+... |++|+.+++++++++.+. ++     +...   .+|..++   ..+.+.+..++
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~---vi~~~~~---~~~~v~~~~~g  252 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RL-----GADH---VVDARRD---PVKQVMELTRG  252 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HT-----TCSE---EEETTSC---HHHHHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-Hh-----CCCE---EEeccch---HHHHHHHHhCC
Confidence            4899999999 89999998887788 999999999988766543 22     2221   1344432   34455554444


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                      ..+|++|.++|.
T Consensus       253 ~g~Dvvid~~G~  264 (359)
T 1h2b_A          253 RGVNVAMDFVGS  264 (359)
T ss_dssp             CCEEEEEESSCC
T ss_pred             CCCcEEEECCCC
Confidence            368899999984

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=97.54  E-value=0.00052  Score=59.95  Aligned_cols=79  Identities=18%  Similarity=0.266  Sum_probs=57.4

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++|+|+|+ |++|...+.-+...|+ +|+.+++++++++.+ +++   +  ...   .+|..++  +..+++.+..++
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~l---G--a~~---vi~~~~~--~~~~~i~~~t~g  280 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KEL---G--ADH---VIDPTKE--NFVEAVLDYTNG  280 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH---T--CSE---EECTTTS--CHHHHHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc---C--CCE---EEcCCCC--CHHHHHHHHhCC
Confidence            4899999998 8999998888888999 899999998776544 233   2  221   1233332  456677776666


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                      ..+|+++.++|.
T Consensus       281 ~g~D~vid~~g~  292 (404)
T 3ip1_A          281 LGAKLFLEATGV  292 (404)
T ss_dssp             CCCSEEEECSSC
T ss_pred             CCCCEEEECCCC
Confidence            568899999884

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.52  E-value=0.00031  Score=57.43  Aligned_cols=82  Identities=23%  Similarity=0.383  Sum_probs=58.7

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh-------------------hhHHHHHHHHHhhcCCceEEEE
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKSV  109 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~  109 (255)
                      ++++++|+|.|+ ||+|.++++.|++.|. ++.++|++.                   .+.+...+.+++.++..++..+
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  103 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL  103 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence            466899999998 6799999999999997 788887653                   5677788888888877777665


Q ss_pred             EEECCCCcHHHHHHHHHHhcCCCccEEEEec
Q 025260          110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNV  140 (255)
Q Consensus       110 ~~d~~~~~~~~~~~~~~~~~~~~id~lv~na  140 (255)
                      ..++++   +   .+.+.+.+  .|++|++.
T Consensus       104 ~~~~~~---~---~~~~~~~~--~DvVi~~~  126 (251)
T 1zud_1          104 QQRLTG---E---ALKDAVAR--ADVVLDCT  126 (251)
T ss_dssp             CSCCCH---H---HHHHHHHH--CSEEEECC
T ss_pred             eccCCH---H---HHHHHHhc--CCEEEECC
Confidence            544432   1   22333343  34777654

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.51  E-value=0.00042  Score=60.05  Aligned_cols=81  Identities=15%  Similarity=0.265  Sum_probs=57.1

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcC-CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC-CcHHHHHHHHHHhc
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG-DLDEGVERIKEAIE  129 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G-~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~  129 (255)
                      .|++|+|+| +|++|...++.+...| ++|+.+++++++++.+. +   .+  ... .  +|... +.++..+++.+..+
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~---lG--a~~-v--i~~~~~~~~~~~~~v~~~~~  264 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-E---IG--ADL-T--LNRRETSVEERRKAIMDITH  264 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-H---TT--CSE-E--EETTTSCHHHHHHHHHHHTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-H---cC--CcE-E--EeccccCcchHHHHHHHHhC
Confidence            489999999 8999999998888899 59999999988766443 2   22  221 1  23321 12355566766655


Q ss_pred             CCCccEEEEecCC
Q 025260          130 GLDVGVLINNVGI  142 (255)
Q Consensus       130 ~~~id~lv~nag~  142 (255)
                      +..+|++|+++|.
T Consensus       265 g~g~Dvvid~~g~  277 (380)
T 1vj0_A          265 GRGADFILEATGD  277 (380)
T ss_dssp             TSCEEEEEECSSC
T ss_pred             CCCCcEEEECCCC
Confidence            5468899999984

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.50  E-value=0.00021  Score=60.58  Aligned_cols=75  Identities=21%  Similarity=0.232  Sum_probs=48.9

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG  134 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id  134 (255)
                      +|+|+||+|++|...++.+...|++|+.+++++++++.+. ++     +... .  +|..+.  + .+.+. ......+|
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~l-----Ga~~-~--i~~~~~--~-~~~~~-~~~~~~~d  218 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VL-----GAKE-V--LAREDV--M-AERIR-PLDKQRWA  218 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HT-----TCSE-E--EECC-------------CCSCCEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-Hc-----CCcE-E--EecCCc--H-HHHHH-HhcCCccc
Confidence            7999999999999999988889999999999988776543 22     2221 1  233321  1 11222 22223688


Q ss_pred             EEEEecCC
Q 025260          135 VLINNVGI  142 (255)
Q Consensus       135 ~lv~nag~  142 (255)
                      ++++++|.
T Consensus       219 ~vid~~g~  226 (328)
T 1xa0_A          219 AAVDPVGG  226 (328)
T ss_dssp             EEEECSTT
T ss_pred             EEEECCcH
Confidence            99999984

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.49  E-value=0.00028  Score=52.18  Aligned_cols=73  Identities=16%  Similarity=0.284  Sum_probs=50.5

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      ++++|.|+ |.+|..+++.|.+.|++|++++++++..++..+    .    .+..+..|.++.  +    +.+..+-.+.
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~----g~~~i~gd~~~~--~----~l~~a~i~~a   72 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R----GVRAVLGNAANE--E----IMQLAHLECA   72 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T----TCEEEESCTTSH--H----HHHHTTGGGC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c----CCCEEECCCCCH--H----HHHhcCcccC
Confidence            56777786 889999999999999999999999887765432    1    234567777764  2    2222222245


Q ss_pred             cEEEEecC
Q 025260          134 GVLINNVG  141 (255)
Q Consensus       134 d~lv~nag  141 (255)
                      |++|.+.+
T Consensus        73 d~vi~~~~   80 (140)
T 3fwz_A           73 KWLILTIP   80 (140)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEECC
Confidence            57776553

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.49  E-value=0.00045  Score=59.64  Aligned_cols=80  Identities=20%  Similarity=0.249  Sum_probs=54.7

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++|+|+|+ |++|...+..+...|+ +|+.+++++++++.+. ++     +... .  +|..+..++..+.+.+..++
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~~-v--i~~~~~~~~~~~~~~~~~~~  261 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF-----GATD-F--VNPNDHSEPISQVLSKMTNG  261 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCCE-E--ECGGGCSSCHHHHHHHHHTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hh-----CCce-E--EeccccchhHHHHHHHHhCC
Confidence            4899999995 9999999988888999 7999999988876543 22     2221 1  34332111344455554444


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                       .+|++|+++|.
T Consensus       262 -g~D~vid~~g~  272 (374)
T 1cdo_A          262 -GVDFSLECVGN  272 (374)
T ss_dssp             -CBSEEEECSCC
T ss_pred             -CCCEEEECCCC
Confidence             68899999974

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.48  E-value=0.00071  Score=57.60  Aligned_cols=76  Identities=16%  Similarity=0.257  Sum_probs=54.2

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++|+|+|+ |++|...++.+...|++|+.+++++++++.+.    +.+  ...   ..|..+.  +..+.+.+..+  
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~lG--a~~---~i~~~~~--~~~~~~~~~~g--  231 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR----RLG--AEV---AVNARDT--DPAAWLQKEIG--  231 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HTT--CSE---EEETTTS--CHHHHHHHHHS--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH----HcC--CCE---EEeCCCc--CHHHHHHHhCC--
Confidence            4899999997 89999999888889999999999988776432    222  221   2344442  44455665444  


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      .+|+++.++|
T Consensus       232 ~~d~vid~~g  241 (340)
T 3s2e_A          232 GAHGVLVTAV  241 (340)
T ss_dssp             SEEEEEESSC
T ss_pred             CCCEEEEeCC
Confidence            5779999887

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.45  E-value=0.00026  Score=52.57  Aligned_cols=44  Identities=18%  Similarity=0.325  Sum_probs=39.3

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHH
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI   97 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~   97 (255)
                      +++++|.|+ |++|..+++.|.+.|++|.+.+|++++.++..+++
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~   64 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY   64 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh
Confidence            889999996 99999999999999999999999998887766554

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.45  E-value=0.00049  Score=59.41  Aligned_cols=80  Identities=23%  Similarity=0.243  Sum_probs=54.7

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++|+|+|+ |++|...++.+...|+ +|+.+++++++++.+. ++     +... .  +|..+..++..+.+.+..++
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~~-v--i~~~~~~~~~~~~~~~~~~~  260 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EV-----GATE-C--VNPQDYKKPIQEVLTEMSNG  260 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCSE-E--ECGGGCSSCHHHHHHHHTTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-----CCce-E--ecccccchhHHHHHHHHhCC
Confidence            4899999995 9999999998888999 7999999988876542 22     2221 1  33332111344555554444


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                       .+|++|+++|.
T Consensus       261 -g~D~vid~~g~  271 (374)
T 2jhf_A          261 -GVDFSFEVIGR  271 (374)
T ss_dssp             -CBSEEEECSCC
T ss_pred             -CCcEEEECCCC
Confidence             68899999974

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=97.42  E-value=0.00033  Score=60.67  Aligned_cols=80  Identities=16%  Similarity=0.130  Sum_probs=56.7

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++|+|+|+ |++|...+.-+...|+ +|+.+++++++++.+.    +.+  ...   .+|..+..++..+.+.+..++
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~----~lG--a~~---vi~~~~~~~~~~~~i~~~~~g  262 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK----KFG--VNE---FVNPKDHDKPIQEVIVDLTDG  262 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH----TTT--CCE---EECGGGCSSCHHHHHHHHTTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----HcC--CcE---EEccccCchhHHHHHHHhcCC
Confidence            4889999998 9999999888888999 8999999988876432    222  221   233332122455666666666


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                       .+|+++.++|.
T Consensus       263 -g~D~vid~~g~  273 (378)
T 3uko_A          263 -GVDYSFECIGN  273 (378)
T ss_dssp             -CBSEEEECSCC
T ss_pred             -CCCEEEECCCC
Confidence             78899999884

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.42  E-value=0.00025  Score=61.44  Aligned_cols=80  Identities=16%  Similarity=0.224  Sum_probs=57.0

Q ss_pred             CCcEEEEEC-CCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTG-PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITG-as~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++|+|.| |+|++|...+.-+...|++|+.+++++++++.+.+    .+ ...+    +|..++  +..+++.+..++
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~----lG-a~~~----~~~~~~--~~~~~v~~~t~~  238 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA----QG-AVHV----CNAASP--TFMQDLTEALVS  238 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH----TT-CSCE----EETTST--THHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh----CC-CcEE----EeCCCh--HHHHHHHHHhcC
Confidence            478899997 99999999998888899999999999887665432    22 1111    343332  455666665554


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                      ..+|+++.++|.
T Consensus       239 ~g~d~v~d~~g~  250 (379)
T 3iup_A          239 TGATIAFDATGG  250 (379)
T ss_dssp             HCCCEEEESCEE
T ss_pred             CCceEEEECCCc
Confidence            457799999985

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.42  E-value=0.00061  Score=58.87  Aligned_cols=80  Identities=18%  Similarity=0.163  Sum_probs=54.8

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++|+|+|+ |++|...+..+...|+ +|+.+++++++++.+. ++     +...   .+|..+..++..+.+.+..++
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~~---vi~~~~~~~~~~~~v~~~~~~  264 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-AL-----GATD---CLNPRELDKPVQDVITELTAG  264 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCSE---EECGGGCSSCHHHHHHHHHTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh-----CCcE---EEccccccchHHHHHHHHhCC
Confidence            4899999996 8999999988888999 7999999988876542 22     2221   123332112344555555454


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                       .+|+++.++|.
T Consensus       265 -g~Dvvid~~G~  275 (376)
T 1e3i_A          265 -GVDYSLDCAGT  275 (376)
T ss_dssp             -CBSEEEESSCC
T ss_pred             -CccEEEECCCC
Confidence             68899999874

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=97.41  E-value=0.001  Score=57.41  Aligned_cols=78  Identities=19%  Similarity=0.226  Sum_probs=54.8

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++|+|+|+ |++|...+..+...|+ +|+.+++++++++.+. ++   +  ...   .+|..++  +..+++.+..++
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~-~l---G--a~~---vi~~~~~--~~~~~~~~~~~g  257 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QL---G--ATH---VINSKTQ--DPVAAIKEITDG  257 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HH---T--CSE---EEETTTS--CHHHHHHHHTTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc---C--CCE---EecCCcc--CHHHHHHHhcCC
Confidence            4899999995 8999999888878899 6999999988766542 32   2  221   1243332  344566665555


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                       .+|+++.++|.
T Consensus       258 -g~D~vid~~g~  268 (371)
T 1f8f_A          258 -GVNFALESTGS  268 (371)
T ss_dssp             -CEEEEEECSCC
T ss_pred             -CCcEEEECCCC
Confidence             78899999884

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.41  E-value=0.00045  Score=59.51  Aligned_cols=78  Identities=14%  Similarity=0.128  Sum_probs=53.0

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHH-cCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAK-TGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~-~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++|+|+||+|++|...+.-+.. .|++|+.+++++++++.+.    +.+  ...   ..|..+   +..+++.+. +.
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~----~lG--ad~---vi~~~~---~~~~~v~~~-~~  237 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK----SLG--AHH---VIDHSK---PLAAEVAAL-GL  237 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH----HTT--CSE---EECTTS---CHHHHHHTT-CS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH----HcC--CCE---EEeCCC---CHHHHHHHh-cC
Confidence            589999999999999887765554 4899999999988766543    222  221   123333   344555544 44


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                      ..+|+++.++|.
T Consensus       238 ~g~Dvvid~~g~  249 (363)
T 4dvj_A          238 GAPAFVFSTTHT  249 (363)
T ss_dssp             CCEEEEEECSCH
T ss_pred             CCceEEEECCCc
Confidence            468899998873

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.41  E-value=0.001  Score=57.37  Aligned_cols=79  Identities=13%  Similarity=0.165  Sum_probs=55.3

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      ..|++|+|+||+|++|...+.-+...|++|+.+. ++++++. .++   .+  ...   .+|..++  +..+.+++..++
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~-~~~---lG--a~~---vi~~~~~--~~~~~v~~~t~g  230 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDL-AKS---RG--AEE---VFDYRAP--NLAQTIRTYTKN  230 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHH-HHH---TT--CSE---EEETTST--THHHHHHHHTTT
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHH-HHH---cC--CcE---EEECCCc--hHHHHHHHHccC
Confidence            4589999999999999999998889999999886 5555542 222   22  211   2344433  455667666554


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                       .+|+++.++|.
T Consensus       231 -~~d~v~d~~g~  241 (371)
T 3gqv_A          231 -NLRYALDCITN  241 (371)
T ss_dssp             -CCCEEEESSCS
T ss_pred             -CccEEEECCCc
Confidence             47899999884

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.38  E-value=0.00019  Score=54.06  Aligned_cols=41  Identities=17%  Similarity=0.305  Sum_probs=36.2

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD   92 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~   92 (255)
                      ..++.++|.|+ |.+|..+++.|.+.|++|++++|+++..+.
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~   57 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHR   57 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGG
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH
Confidence            45789999996 999999999999999999999999877543

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.38  E-value=0.00033  Score=58.89  Aligned_cols=37  Identities=24%  Similarity=0.296  Sum_probs=32.4

Q ss_pred             cCCcE-EEEECCCC-----------------c-hHHHHHHHHHHcCCcEEEEeCCh
Q 025260           51 KYGSW-ALVTGPTD-----------------G-IGKSFAFQLAKTGLNLVLVGRNP   87 (255)
Q Consensus        51 ~~gk~-vlITGas~-----------------g-IG~~la~~la~~G~~V~l~~r~~   87 (255)
                      +.||. ||||+|..                 | .|.++|++++++|+.|+++.+..
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~   89 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR   89 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence            45777 99998876                 6 99999999999999999998854

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.36  E-value=0.0012  Score=56.60  Aligned_cols=80  Identities=18%  Similarity=0.219  Sum_probs=55.1

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC-CcHHHHHHHHHHhc
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG-DLDEGVERIKEAIE  129 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~  129 (255)
                      .|++|+|+|+ |++|...+..+...|+ +|+++++++++++.+. +   .  +.. ..  +|..+ +..+..+++.+..+
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~---l--Ga~-~v--i~~~~~~~~~~~~~i~~~~~  240 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-E---I--GAD-LV--LQISKESPQEIARKVEGQLG  240 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-H---T--TCS-EE--EECSSCCHHHHHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-H---h--CCC-EE--EcCcccccchHHHHHHHHhC
Confidence            4899999996 8999999888888999 8999999987765442 2   2  222 12  23331 12355566666555


Q ss_pred             CCCccEEEEecCC
Q 025260          130 GLDVGVLINNVGI  142 (255)
Q Consensus       130 ~~~id~lv~nag~  142 (255)
                       ..+|++|.++|.
T Consensus       241 -~g~D~vid~~g~  252 (356)
T 1pl8_A          241 -CKPEVTIECTGA  252 (356)
T ss_dssp             -SCCSEEEECSCC
T ss_pred             -CCCCEEEECCCC
Confidence             357799999873

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=97.34  E-value=0.00073  Score=58.31  Aligned_cols=80  Identities=23%  Similarity=0.214  Sum_probs=54.6

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++|+|+|+ |++|...+..+...|+ +|+.+++++++++.+. ++     +... .  +|..+..++..+.+.+..++
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~~-v--i~~~~~~~~~~~~i~~~t~g  260 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL-----GATE-C--LNPKDYDKPIYEVICEKTNG  260 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT-----TCSE-E--ECGGGCSSCHHHHHHHHTTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc-----CCcE-E--EecccccchHHHHHHHHhCC
Confidence            4899999995 8999999888888899 7999999988876543 22     2221 1  23332112344556555554


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                       .+|++|.++|.
T Consensus       261 -g~Dvvid~~g~  271 (373)
T 1p0f_A          261 -GVDYAVECAGR  271 (373)
T ss_dssp             -CBSEEEECSCC
T ss_pred             -CCCEEEECCCC
Confidence             68899999874

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.34  E-value=0.0029  Score=53.35  Aligned_cols=118  Identities=17%  Similarity=0.251  Sum_probs=70.7

Q ss_pred             EEEEECCCCchHHHHHHHHHHcC--CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G--~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      .+.|+||+|.+|..++..|++.|  .+|++.|+++  .+....++.+.....++....  -+       +...+.+.+  
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~--~t-------~d~~~a~~~--   68 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL--GP-------EQLPDCLKG--   68 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE--SG-------GGHHHHHTT--
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec--CC-------CCHHHHhCC--
Confidence            58899999999999999999988  6899999987  333344454322111121110  01       124444554  


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccc
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA  196 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~  196 (255)
                      .|++|+.+|.....     ..+.   ...+..|......+.+.+..+   ...+.++++|....
T Consensus        69 aDvVvi~ag~~~~~-----g~~r---~dl~~~n~~i~~~i~~~i~~~---~p~a~viv~sNPv~  121 (314)
T 1mld_A           69 CDVVVIPAGVPRKP-----GMTR---DDLFNTNATIVATLTAACAQH---CPDAMICIISNPVN  121 (314)
T ss_dssp             CSEEEECCSCCCCT-----TCCG---GGGHHHHHHHHHHHHHHHHHH---CTTSEEEECSSCHH
T ss_pred             CCEEEECCCcCCCC-----CCcH---HHHHHHHHHHHHHHHHHHHhh---CCCeEEEEECCCcc
Confidence            45999999975421     1222   223566666555555554332   35678888766443

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=97.32  E-value=0.00084  Score=57.44  Aligned_cols=79  Identities=18%  Similarity=0.170  Sum_probs=56.4

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++|+|+|+ |++|...+.-+...|+ +|+.+++++++++.+ +++   +  ...   ..|..+.  +..+++.+..++
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~l---G--a~~---vi~~~~~--~~~~~v~~~t~g  233 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEY---G--ATD---IINYKNG--DIVEQILKATDG  233 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHH---T--CCE---EECGGGS--CHHHHHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHh---C--Cce---EEcCCCc--CHHHHHHHHcCC
Confidence            4889999985 8999998888888999 899999998776543 223   2  211   1233332  455677777666


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                      ..+|+++.++|.
T Consensus       234 ~g~D~v~d~~g~  245 (352)
T 3fpc_A          234 KGVDKVVIAGGD  245 (352)
T ss_dssp             CCEEEEEECSSC
T ss_pred             CCCCEEEECCCC
Confidence            578899998875

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=97.30  E-value=0.001  Score=57.99  Aligned_cols=79  Identities=20%  Similarity=0.352  Sum_probs=55.7

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHH-HHHHHHHhc
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEG-VERIKEAIE  129 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~~~~~~  129 (255)
                      .|++|+|.|+ |++|...+..+...|+ +|+.+++++++++.+.    +.  +..  .  +|..++  +. .+++.+..+
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~l--Ga~--~--i~~~~~--~~~~~~~~~~~~  251 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS----DA--GFE--T--IDLRNS--APLRDQIDQILG  251 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH----TT--TCE--E--EETTSS--SCHHHHHHHHHS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----Hc--CCc--E--EcCCCc--chHHHHHHHHhC
Confidence            4899999997 9999998888778899 8999999988765432    22  222  2  354432  22 455555555


Q ss_pred             CCCccEEEEecCCC
Q 025260          130 GLDVGVLINNVGIS  143 (255)
Q Consensus       130 ~~~id~lv~nag~~  143 (255)
                      +..+|++|.++|..
T Consensus       252 g~g~Dvvid~~g~~  265 (398)
T 2dph_A          252 KPEVDCGVDAVGFE  265 (398)
T ss_dssp             SSCEEEEEECSCTT
T ss_pred             CCCCCEEEECCCCc
Confidence            54688999999853

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.28  E-value=0.00098  Score=57.51  Aligned_cols=78  Identities=26%  Similarity=0.304  Sum_probs=53.5

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHH---H
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKE---A  127 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~---~  127 (255)
                      .|++|+|+|+ |++|...+.-+...|+ +|+++++++++.+.+ +++     +...   ..|..+.  +..+.+.+   .
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~~---vi~~~~~--~~~~~i~~~~~~  249 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLA-EEV-----GATA---TVDPSAG--DVVEAIAGPVGL  249 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH-----TCSE---EECTTSS--CHHHHHHSTTSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc-----CCCE---EECCCCc--CHHHHHHhhhhc
Confidence            4899999998 8999998888888999 899999988776533 333     2221   2344332  34455554   3


Q ss_pred             hcCCCccEEEEecCC
Q 025260          128 IEGLDVGVLINNVGI  142 (255)
Q Consensus       128 ~~~~~id~lv~nag~  142 (255)
                      .++ .+|+++.++|.
T Consensus       250 ~~g-g~Dvvid~~G~  263 (370)
T 4ej6_A          250 VPG-GVDVVIECAGV  263 (370)
T ss_dssp             STT-CEEEEEECSCC
T ss_pred             cCC-CCCEEEECCCC
Confidence            334 68899999874

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.26  E-value=0.00044  Score=53.38  Aligned_cols=76  Identities=12%  Similarity=0.064  Sum_probs=51.5

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHc-CCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh-
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI-  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~-G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-  128 (255)
                      ..++.++|.| .|.+|..+++.|.+. |++|++++++++..++..    +.  +  ...+..|.++.     +.+. .. 
T Consensus        37 ~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~~--g--~~~~~gd~~~~-----~~l~-~~~  101 (183)
T 3c85_A           37 PGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHR----SE--G--RNVISGDATDP-----DFWE-RIL  101 (183)
T ss_dssp             CTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----HT--T--CCEEECCTTCH-----HHHH-TBC
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH----HC--C--CCEEEcCCCCH-----HHHH-hcc
Confidence            4577788888 499999999999999 999999999987765533    22  2  23455666653     1222 22 


Q ss_pred             cCCCccEEEEecC
Q 025260          129 EGLDVGVLINNVG  141 (255)
Q Consensus       129 ~~~~id~lv~nag  141 (255)
                      +-.+.|++|.+.+
T Consensus       102 ~~~~ad~vi~~~~  114 (183)
T 3c85_A          102 DTGHVKLVLLAMP  114 (183)
T ss_dssp             SCCCCCEEEECCS
T ss_pred             CCCCCCEEEEeCC
Confidence            2224668887654

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.26  E-value=0.0018  Score=55.07  Aligned_cols=118  Identities=25%  Similarity=0.256  Sum_probs=72.7

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCC--c-----EEEEeCCh--hhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHH
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGL--N-----LVLVGRNP--DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERI  124 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~--~-----V~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  124 (255)
                      ..|.||||+|.||.+++..|+..|.  +     +++.|+++  +.++....++....... ..  .....+.       .
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~-~~--~~~~~~~-------~   73 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPL-LK--DVIATDK-------E   73 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTT-EE--EEEEESC-------H
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcc-cC--CEEEcCC-------c
Confidence            4699999999999999999998885  5     99999975  45666666666532111 21  2222222       3


Q ss_pred             HHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-Cc-EEEEECCcc
Q 025260          125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KG-AIVNIGSGA  195 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g-~iv~vsS~~  195 (255)
                      .+.+.  +.|++|+.||.....     .++.   ...++.|......+.+.    +.+.. ++ +++++|...
T Consensus        74 ~~~~~--daDvVvitAg~prkp-----G~tR---~dll~~N~~i~~~i~~~----i~~~~~~~~~vivvsNPv  132 (333)
T 5mdh_A           74 EIAFK--DLDVAILVGSMPRRD-----GMER---KDLLKANVKIFKCQGAA----LDKYAKKSVKVIVVGNPA  132 (333)
T ss_dssp             HHHTT--TCSEEEECCSCCCCT-----TCCT---TTTHHHHHHHHHHHHHH----HHHHSCTTCEEEECSSSH
T ss_pred             HHHhC--CCCEEEEeCCCCCCC-----CCCH---HHHHHHHHHHHHHHHHH----HHHhCCCCeEEEEcCCch
Confidence            44455  455999999864321     1222   33466666655444444    44443 45 588877643

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=97.25  E-value=0.0023  Score=54.46  Aligned_cols=89  Identities=16%  Similarity=0.228  Sum_probs=63.6

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh-------------------hhHHHHHHHHHhhcCCceEEEE
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKSV  109 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~  109 (255)
                      ++++++|+|.|+ ||+|.++++.|++.|. ++.++|++.                   .+.+.+.+.+++.+|..++..+
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~  109 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  109 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEE
Confidence            367999999987 6999999999999997 799988753                   5677788888888888888777


Q ss_pred             EEECCC---Cc------HHHHHHHHHHhcCCCccEEEEecC
Q 025260          110 VVDFSG---DL------DEGVERIKEAIEGLDVGVLINNVG  141 (255)
Q Consensus       110 ~~d~~~---~~------~~~~~~~~~~~~~~~id~lv~nag  141 (255)
                      ..++..   .+      ....+.+.+.+.+.|  ++|++..
T Consensus       110 ~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~D--lVvd~tD  148 (340)
T 3rui_A          110 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHD--IIFLLVD  148 (340)
T ss_dssp             CCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCS--EEEECCS
T ss_pred             eccccccCcccchhhhhcCCHHHHHhhhccCC--EEEecCC
Confidence            665521   00      111233445555444  7777654

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=97.20  E-value=0.0023  Score=55.65  Aligned_cols=80  Identities=23%  Similarity=0.272  Sum_probs=56.2

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++|+|.|+ |++|...+.-+...|+ +|+.+++++++++.+. +   .  +..  .  +|..++ +...+++.+..++
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~-~---l--Ga~--~--i~~~~~-~~~~~~v~~~t~g  252 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-A---Q--GFE--I--ADLSLD-TPLHEQIAALLGE  252 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-H---T--TCE--E--EETTSS-SCHHHHHHHHHSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH-H---c--CCc--E--EccCCc-chHHHHHHHHhCC
Confidence            4899999995 9999998887778999 6899999988766542 2   2  232  2  344432 1245566665555


Q ss_pred             CCccEEEEecCCC
Q 025260          131 LDVGVLINNVGIS  143 (255)
Q Consensus       131 ~~id~lv~nag~~  143 (255)
                      ..+|++|.++|..
T Consensus       253 ~g~Dvvid~~G~~  265 (398)
T 1kol_A          253 PEVDCAVDAVGFE  265 (398)
T ss_dssp             SCEEEEEECCCTT
T ss_pred             CCCCEEEECCCCc
Confidence            4688999999864

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.19  E-value=0.0053  Score=52.01  Aligned_cols=116  Identities=16%  Similarity=0.223  Sum_probs=73.2

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhcCC--ceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAK--TQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      .+.+.|+|+ |.+|.++|..|+..|.  +|++.|+++++++....++....+.  ..+... .+   +        .+.+
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~-~~---~--------~~a~   71 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTS-YG---T--------YEDC   71 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEE-EE---C--------GGGG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEE-eC---c--------HHHh
Confidence            567899996 9999999999999996  8999999998888777777654221  122222 11   1        1234


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECCcc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGA  195 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS~~  195 (255)
                      .  +-|++|..||....   +  ..+..   ..++.|..-.    +.+.+.+.+. .++.++++|...
T Consensus        72 ~--~aDvVvi~ag~p~k---p--G~~R~---dL~~~N~~Iv----~~i~~~I~~~~p~a~vlvvtNPv  125 (326)
T 3pqe_A           72 K--DADIVCICAGANQK---P--GETRL---ELVEKNLKIF----KGIVSEVMASGFDGIFLVATNPV  125 (326)
T ss_dssp             T--TCSEEEECCSCCCC---T--TCCHH---HHHHHHHHHH----HHHHHHHHHTTCCSEEEECSSSH
T ss_pred             C--CCCEEEEecccCCC---C--CccHH---HHHHHHHHHH----HHHHHHHHHhcCCeEEEEcCChH
Confidence            4  45599999997432   1  23332   2355555444    4444434333 467788887643

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=97.18  E-value=0.00088  Score=57.53  Aligned_cols=82  Identities=11%  Similarity=0.345  Sum_probs=61.6

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh-------------------hhHHHHHHHHHhhcCCceEEEE
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKSV  109 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~  109 (255)
                      ++++++|+|.|+ ||+|.++++.|++.|. ++.++|++.                   .+.+.+.+.+++.+|..++..+
T Consensus       115 ~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  193 (353)
T 3h5n_A          115 KLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEI  193 (353)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEe
Confidence            456889999988 7999999999999997 899998763                   3667788888888888888887


Q ss_pred             EEECCCCcHHHHHHHHHHhcCCCccEEEEec
Q 025260          110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNV  140 (255)
Q Consensus       110 ~~d~~~~~~~~~~~~~~~~~~~~id~lv~na  140 (255)
                      ..++.+.  .   .+.+ +.+  .|++|.+.
T Consensus       194 ~~~i~~~--~---~~~~-~~~--~DlVvd~~  216 (353)
T 3h5n_A          194 ALNINDY--T---DLHK-VPE--ADIWVVSA  216 (353)
T ss_dssp             ECCCCSG--G---GGGG-SCC--CSEEEECC
T ss_pred             ecccCch--h---hhhH-hcc--CCEEEEec
Confidence            7776643  1   1222 443  44777754

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.18  E-value=0.0041  Score=53.08  Aligned_cols=116  Identities=21%  Similarity=0.210  Sum_probs=70.9

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhc-CCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKY-AKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      ++.|.|+|++|++|..+|..++.+|.  +|++.|.++++++....++.... +..++.     .+.       ...+.+.
T Consensus         8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~-----~t~-------d~~~al~   75 (343)
T 3fi9_A            8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLT-----FTS-------DIKEALT   75 (343)
T ss_dssp             SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCE-----EES-------CHHHHHT
T ss_pred             CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceE-----EcC-------CHHHHhC
Confidence            67899999999999999999999994  89999999988877666676531 111111     111       2334444


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcE-EEEECCc
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGA-IVNIGSG  194 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~-iv~vsS~  194 (255)
                        +-|++|.+||....   +  ..+.   ...++.|..-.    +.+.+.+.+. .++. ++++|..
T Consensus        76 --dADvVvitaG~p~k---p--G~~R---~dLl~~N~~I~----~~i~~~i~~~~p~a~~vlvvsNP  128 (343)
T 3fi9_A           76 --DAKYIVSSGGAPRK---E--GMTR---EDLLKGNAEIA----AQLGKDIKSYCPDCKHVIIIFNP  128 (343)
T ss_dssp             --TEEEEEECCC------------CH---HHHHHHHHHHH----HHHHHHHHHHCTTCCEEEECSSS
T ss_pred             --CCCEEEEccCCCCC---C--CCCH---HHHHHHHHHHH----HHHHHHHHHhccCcEEEEEecCc
Confidence              46699999997432   1  2233   23455555444    4444444443 4564 6677653

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=97.17  E-value=0.00097  Score=57.20  Aligned_cols=75  Identities=17%  Similarity=0.238  Sum_probs=50.5

Q ss_pred             CCcEEEEECCCCchHHHH-HHHH-HHcCCc-EEEEeCChh---hHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHH
Q 025260           52 YGSWALVTGPTDGIGKSF-AFQL-AKTGLN-LVLVGRNPD---KLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIK  125 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~l-a~~l-a~~G~~-V~l~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  125 (255)
                      ++++|+|+|| |++|... +.-+ ...|++ |+.++++++   +++.+. ++     +..  .+  |..++  +..+ +.
T Consensus       172 ~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~-~l-----Ga~--~v--~~~~~--~~~~-i~  237 (357)
T 2b5w_A          172 DPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE-EL-----DAT--YV--DSRQT--PVED-VP  237 (357)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH-HT-----TCE--EE--ETTTS--CGGG-HH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH-Hc-----CCc--cc--CCCcc--CHHH-HH
Confidence            3499999999 9999998 7666 578997 999999887   665432 22     222  22  44432  2223 44


Q ss_pred             HHhcCCCccEEEEecCC
Q 025260          126 EAIEGLDVGVLINNVGI  142 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~  142 (255)
                      +. ++ .+|++|.++|.
T Consensus       238 ~~-~g-g~Dvvid~~g~  252 (357)
T 2b5w_A          238 DV-YE-QMDFIYEATGF  252 (357)
T ss_dssp             HH-SC-CEEEEEECSCC
T ss_pred             Hh-CC-CCCEEEECCCC
Confidence            44 44 78899999874

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.17  E-value=0.00036  Score=58.04  Aligned_cols=46  Identities=20%  Similarity=0.325  Sum_probs=39.9

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSD   95 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~   95 (255)
                      .+++||.++|.|+ ||.|++++..|.+.|+ +|.+++|+.++.++..+
T Consensus       118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~  164 (282)
T 3fbt_A          118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG  164 (282)
T ss_dssp             CCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT
T ss_pred             CCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            4567999999997 6999999999999998 89999999988766543

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.09  E-value=0.0014  Score=55.95  Aligned_cols=41  Identities=15%  Similarity=0.127  Sum_probs=36.2

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHc--CCcEEEEeCChhhHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKT--GLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~--G~~V~l~~r~~~~~~~~   93 (255)
                      .|++|+|+|+ |++|...++.+...  |++|+.+++++++++.+
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~  212 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFA  212 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHH
Confidence            5899999999 89999998888888  99999999998876644

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=97.07  E-value=0.0031  Score=53.64  Aligned_cols=78  Identities=22%  Similarity=0.251  Sum_probs=54.6

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHc-CCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~-G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++++|+|+ |++|...+.-+... |++|+.+++++++++.+.    +.+  ... .  .|..+   +..+++.+..++
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~----~lG--a~~-~--i~~~~---~~~~~v~~~t~g  237 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR----EVG--ADA-A--VKSGA---GAADAIRELTGG  237 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH----HTT--CSE-E--EECST---THHHHHHHHHGG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----HcC--CCE-E--EcCCC---cHHHHHHHHhCC
Confidence            4899999998 99999887766666 789999999988766442    222  221 1  23222   455667766665


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                      ..+|+++.++|.
T Consensus       238 ~g~d~v~d~~G~  249 (345)
T 3jv7_A          238 QGATAVFDFVGA  249 (345)
T ss_dssp             GCEEEEEESSCC
T ss_pred             CCCeEEEECCCC
Confidence            578899999874

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=97.06  E-value=0.0039  Score=53.00  Aligned_cols=79  Identities=23%  Similarity=0.329  Sum_probs=53.7

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHc-CCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~-G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++|+|.|| |++|...+..+.+. |++|+.+++++++++...    +.  +...   ..|-.+.  +..+++.+..++
T Consensus       163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~----~~--Ga~~---~i~~~~~--~~~~~v~~~t~g  230 (348)
T 4eez_A          163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK----KI--GADV---TINSGDV--NPVDEIKKITGG  230 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH----HT--TCSE---EEEC-CC--CHHHHHHHHTTS
T ss_pred             CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh----hc--CCeE---EEeCCCC--CHHHHhhhhcCC
Confidence            4899999987 77887777777655 689999999988765332    22  2221   1233333  456777777777


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                      .++|.++.++|.
T Consensus       231 ~g~d~~~~~~~~  242 (348)
T 4eez_A          231 LGVQSAIVCAVA  242 (348)
T ss_dssp             SCEEEEEECCSC
T ss_pred             CCceEEEEeccC
Confidence            778888887764

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.02  E-value=0.0013  Score=56.47  Aligned_cols=75  Identities=15%  Similarity=0.192  Sum_probs=51.8

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++|+|+|+ |++|...+..+...|++|+++++++++++.+.+++   + ...+    .|..+.     +.+.+..+  
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l---G-a~~v----i~~~~~-----~~~~~~~~--  243 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL---G-ADDY----VIGSDQ-----AKMSELAD--  243 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS---C-CSCE----EETTCH-----HHHHHSTT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc---C-Ccee----eccccH-----HHHHHhcC--
Confidence            5899999995 99999999888889999999999988766544222   1 2111    233321     23333323  


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      .+|+++.++|.
T Consensus       244 g~D~vid~~g~  254 (357)
T 2cf5_A          244 SLDYVIDTVPV  254 (357)
T ss_dssp             TEEEEEECCCS
T ss_pred             CCCEEEECCCC
Confidence            57899999985

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.01  E-value=0.001  Score=54.82  Aligned_cols=43  Identities=28%  Similarity=0.413  Sum_probs=39.3

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHH
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI   97 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~   97 (255)
                      +|.++|.|+ ||.|++++..|++.|.+|.+.+|+.++.++.. ++
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~  160 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL  160 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC
Confidence            899999997 89999999999999999999999999888776 44

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.00  E-value=0.0014  Score=51.99  Aligned_cols=54  Identities=9%  Similarity=0.171  Sum_probs=42.1

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD  116 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  116 (255)
                      .++|.|+ |.+|..++++|.++|++|++++++++..++..++.       ....+..|.++.
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-------~~~~i~gd~~~~   55 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-------KATIIHGDGSHK   55 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-------SSEEEESCTTSH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-------CCeEEEcCCCCH
Confidence            4789996 89999999999999999999999988776544321       234566777653

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.00  E-value=0.0013  Score=51.88  Aligned_cols=42  Identities=26%  Similarity=0.414  Sum_probs=37.1

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHH
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDS   96 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~   96 (255)
                      ++.|+||+|.+|.++++.|++.|++|.+.+|++++.++..++
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            478999999999999999999999999999998877665544

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.97  E-value=0.027  Score=47.97  Aligned_cols=118  Identities=20%  Similarity=0.245  Sum_probs=70.5

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCC-------cEEEEeCChh--hHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHH
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGL-------NLVLVGRNPD--KLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVER  123 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~-------~V~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  123 (255)
                      .-.|.|+||+|+||..++..|++...       ++.+.|.++.  .++-...++.............   .++       
T Consensus        24 ~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~---~~~-------   93 (345)
T 4h7p_A           24 AVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVV---TAD-------   93 (345)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEE---ESC-------
T ss_pred             CCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEE---cCC-------
Confidence            45799999999999999999988643       6899998763  3455555665532222222221   222       


Q ss_pred             HHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC--CCcEEEEECCc
Q 025260          124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR--KKGAIVNIGSG  194 (255)
Q Consensus       124 ~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~--~~g~iv~vsS~  194 (255)
                      ..+.+.+  -|++|..||....     ..++.++   .++.|.    .+++...+.+.+.  +...|+.+|..
T Consensus        94 ~~~a~~~--advVvi~aG~prk-----pGmtR~D---Ll~~Na----~I~~~~~~~i~~~a~~~~~vlvvsNP  152 (345)
T 4h7p_A           94 PRVAFDG--VAIAIMCGAFPRK-----AGMERKD---LLEMNA----RIFKEQGEAIAAVAASDCRVVVVGNP  152 (345)
T ss_dssp             HHHHTTT--CSEEEECCCCCCC-----TTCCHHH---HHHHHH----HHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred             hHHHhCC--CCEEEECCCCCCC-----CCCCHHH---HHHHhH----HHHHHHHHHHHhhccCceEEEEeCCC
Confidence            2344554  4599999997542     1345544   344443    4455555555542  34456666643

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.96  E-value=0.0058  Score=51.75  Aligned_cols=117  Identities=13%  Similarity=0.211  Sum_probs=67.4

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhcCC-ceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAK-TQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      +++.+.|+|+ |++|.++|..|+..|.  +|++.|+++++++....++....+. ..+... .   ++        .+.+
T Consensus         8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~-~---~~--------~~a~   74 (326)
T 3vku_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIY-S---AE--------YSDA   74 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-E---CC--------GGGG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEE-E---Cc--------HHHh
Confidence            3678999996 9999999999999987  8999999998888777777654321 111111 1   11        1234


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECCcc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGA  195 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS~~  195 (255)
                      .  +-|++|..||.....     .++.   ...++.|.--    ++.+.+.+.+. +++.++++|...
T Consensus        75 ~--~aDiVvi~ag~~~kp-----G~tR---~dL~~~N~~I----~~~i~~~i~~~~p~a~ilvvtNPv  128 (326)
T 3vku_A           75 K--DADLVVITAGAPQKP-----GETR---LDLVNKNLKI----LKSIVDPIVDSGFNGIFLVAANPV  128 (326)
T ss_dssp             T--TCSEEEECCCCC------------------------C----HHHHHHHHHTTTCCSEEEECSSSH
T ss_pred             c--CCCEEEECCCCCCCC-----CchH---HHHHHHHHHH----HHHHHHHHHhcCCceEEEEccCch
Confidence            4  455999999974321     1222   2334445433    34444444433 467777777543

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.96  E-value=0.003  Score=54.43  Aligned_cols=74  Identities=16%  Similarity=0.147  Sum_probs=51.4

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++|+|+|+ |++|...++.+...|++|+.+++++++++.+.+ +     +...   .+|..++  +..+++    . .
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~-l-----Ga~~---vi~~~~~--~~~~~~----~-~  256 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-L-----GADE---VVNSRNA--DEMAAH----L-K  256 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H-----TCSE---EEETTCH--HHHHTT----T-T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----CCcE---EeccccH--HHHHHh----h-c
Confidence            4899999998 899999998888899999999999888765532 3     2221   1343332  222222    1 2


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      .+|++|+++|.
T Consensus       257 g~Dvvid~~g~  267 (369)
T 1uuf_A          257 SFDFILNTVAA  267 (369)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCCEEEECCCC
Confidence            57899999985

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.94  E-value=0.0015  Score=55.78  Aligned_cols=41  Identities=24%  Similarity=0.293  Sum_probs=36.3

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~   93 (255)
                      .|++|+|+|+ |++|...+..+...|++|+++++++++.+.+
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  216 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA  216 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence            4899999997 9999999888888999999999998887654

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.94  E-value=0.001  Score=57.08  Aligned_cols=38  Identities=21%  Similarity=0.294  Sum_probs=32.3

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhh
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK   89 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~   89 (255)
                      .|++|+|+||+|++|...+.-+...|++|+++.+..++
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPD  204 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccc
Confidence            48999999999999999888777889998888766543

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.91  E-value=0.00041  Score=57.51  Aligned_cols=43  Identities=21%  Similarity=0.292  Sum_probs=37.9

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDV   93 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~   93 (255)
                      +++||+++|+|+ ||.|++++..|++.|+ +|.+.+|+.++.++.
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l  157 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNW  157 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            456999999997 7999999999999999 899999998876543

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.89  E-value=0.0022  Score=54.12  Aligned_cols=74  Identities=12%  Similarity=0.213  Sum_probs=48.9

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++|+|+||+|++|...+..+...|++|+.+++++ +. +..+++   +  ...   ..|..+.  +   .+.+..+  
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~~-~~~~~l---G--a~~---~i~~~~~--~---~~~~~~~--  214 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-NH-AFLKAL---G--AEQ---CINYHEE--D---FLLAIST--  214 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-HH-HHHHHH---T--CSE---EEETTTS--C---HHHHCCS--
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-hH-HHHHHc---C--CCE---EEeCCCc--c---hhhhhcc--
Confidence            489999999999999999999999999999988543 32 233332   2  221   2344432  1   1222223  


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      .+|+++.++|.
T Consensus       215 g~D~v~d~~g~  225 (321)
T 3tqh_A          215 PVDAVIDLVGG  225 (321)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCCEEEECCCc
Confidence            57799998873

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.88  E-value=0.0065  Score=55.44  Aligned_cols=89  Identities=16%  Similarity=0.228  Sum_probs=64.5

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh-------------------hhHHHHHHHHHhhcCCceEEEE
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKSV  109 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~  109 (255)
                      ++++++|+|.|+ ||+|.++|+.|++.|. ++.++|++.                   .+.+.+.+.+++.+|..++..+
T Consensus       323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~  401 (615)
T 4gsl_A          323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  401 (615)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEe
Confidence            467999999987 5999999999999997 899998764                   4677888889999888888877


Q ss_pred             EEECCC---Cc------HHHHHHHHHHhcCCCccEEEEecC
Q 025260          110 VVDFSG---DL------DEGVERIKEAIEGLDVGVLINNVG  141 (255)
Q Consensus       110 ~~d~~~---~~------~~~~~~~~~~~~~~~id~lv~nag  141 (255)
                      ..++..   .+      ....+.+.+.+.+.|  +||++..
T Consensus       402 ~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~D--lVvd~tD  440 (615)
T 4gsl_A          402 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHD--IIFLLVD  440 (615)
T ss_dssp             CCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCS--EEEECCS
T ss_pred             eccccccCccccchhhhcCCHHHHHHHhhcCC--EEEecCC
Confidence            765521   10      111233444455444  8887654

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.84  E-value=0.03  Score=46.61  Aligned_cols=112  Identities=12%  Similarity=0.137  Sum_probs=68.7

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhc---C-CceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKY---A-KTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~---~-~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      .+.|+|+ |.+|.+++..|++.|.  +|.+.|+++++++....++....   + ..++..     +++        .+.+
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~-----t~d--------~~a~   67 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVG-----GAD--------YSLL   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEE-----ESC--------GGGG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEE-----eCC--------HHHh
Confidence            4789999 9999999999999997  89999999988764444443321   1 122211     111        2234


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECCc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSG  194 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS~  194 (255)
                      .  +-|++|..+|.....     .++..+   .++.|.    .+++...+.+.+. +++.++++|..
T Consensus        68 ~--~aDiVViaag~~~kp-----G~~R~d---l~~~N~----~i~~~i~~~i~~~~p~a~iivvsNP  120 (294)
T 1oju_A           68 K--GSEIIVVTAGLARKP-----GMTRLD---LAHKNA----GIIKDIAKKIVENAPESKILVVTNP  120 (294)
T ss_dssp             T--TCSEEEECCCCCCCS-----SCCHHH---HHHHHH----HHHHHHHHHHHTTSTTCEEEECSSS
T ss_pred             C--CCCEEEECCCCCCCC-----CCcHHH---HHHHHH----HHHHHHHHHHHhhCCCeEEEEeCCc
Confidence            4  345999999975321     234332   344453    4445555555443 46777777753

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.81  E-value=0.014  Score=49.55  Aligned_cols=119  Identities=22%  Similarity=0.187  Sum_probs=75.0

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhc--CCceEEEEEEECCCCcHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKY--AKTQIKSVVVDFSGDLDEGVERIKE  126 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~  126 (255)
                      ...+.+.|+|+ |++|.++|..++.+|.  +|++.|+++++++....++....  +... ....   +++       . +
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~-~i~~---~~d-------~-~   83 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTP-KIVS---SKD-------Y-S   83 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCC-EEEE---CSS-------G-G
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCC-eEEE---cCC-------H-H
Confidence            44678999997 9999999999999997  89999999988888777776532  1111 1111   111       1 1


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcc
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGA  195 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~  195 (255)
                      .+.  +-|++|..||.....     .++.   .+.++.|.-=...+.+.+..   ..+++.++++|...
T Consensus        84 ~~~--~aDiVvi~aG~~~kp-----G~tR---~dL~~~N~~I~~~i~~~i~~---~~p~a~vlvvtNPv  139 (331)
T 4aj2_A           84 VTA--NSKLVIITAGARQQE-----GESR---LNLVQRNVNIFKFIIPNVVK---YSPQCKLLIVSNPV  139 (331)
T ss_dssp             GGT--TEEEEEECCSCCCCT-----TCCG---GGGHHHHHHHHHHHHHHHHH---HCTTCEEEECSSSH
T ss_pred             HhC--CCCEEEEccCCCCCC-----CccH---HHHHHHHHHHHHHHHHHHHH---HCCCeEEEEecChH
Confidence            333  566999999975321     2232   23455555444344444333   13467888887643

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=96.75  E-value=0.0012  Score=55.87  Aligned_cols=92  Identities=15%  Similarity=0.147  Sum_probs=57.6

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH-----HHHHHhhcCCceEEEEEEECCCCcHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV-----SDSIQAKYAKTQIKSVVVDFSGDLDEGVER  123 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~-----~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  123 (255)
                      ..++||++.|.|. |.||+++|+.+...|++|+..+|+....+..     ..++.+.....++..+.+.++++.+..+. 
T Consensus       135 ~~l~g~tvGIiG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~-  212 (315)
T 3pp8_A          135 YTREEFSVGIMGA-GVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESYVGREELRAFLNQTRVLINLLPNTAQTVGIIN-  212 (315)
T ss_dssp             CCSTTCCEEEECC-SHHHHHHHHHHHTTTCCEEEEESSCCCCTTCEEEESHHHHHHHHHTCSEEEECCCCCGGGTTCBS-
T ss_pred             CCcCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCchhhhhhhhhcccCCHHHHHhhCCEEEEecCCchhhhhhcc-
Confidence            3577999999987 7999999999999999999999886532110     01222222255677777776654333331 


Q ss_pred             HHHHhcCCCccEEEEecCCC
Q 025260          124 IKEAIEGLDVGVLINNVGIS  143 (255)
Q Consensus       124 ~~~~~~~~~id~lv~nag~~  143 (255)
                       .+.+...+.+.++-|.|..
T Consensus       213 -~~~l~~mk~gailIN~aRG  231 (315)
T 3pp8_A          213 -SELLDQLPDGAYVLNLARG  231 (315)
T ss_dssp             -HHHHTTSCTTEEEEECSCG
T ss_pred             -HHHHhhCCCCCEEEECCCC
Confidence             1223333334666666653

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.75  E-value=0.0014  Score=55.52  Aligned_cols=41  Identities=29%  Similarity=0.349  Sum_probs=36.0

Q ss_pred             Cc-EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH
Q 025260           53 GS-WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        53 gk-~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~   93 (255)
                      |+ +|+|+||+|++|...++.+...|++|+.+++++++++.+
T Consensus       150 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  191 (330)
T 1tt7_A          150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL  191 (330)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             CCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            44 799999999999999998888999999999998776554

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.69  E-value=0.0034  Score=54.05  Aligned_cols=47  Identities=19%  Similarity=0.203  Sum_probs=41.4

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI   97 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~   97 (255)
                      +++||+|+|.|+ |.+|..+|+.|.+.|++|++.+++.+++++..++.
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            466999999997 78999999999999999999999988877766654

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.68  E-value=0.0029  Score=55.30  Aligned_cols=46  Identities=20%  Similarity=0.370  Sum_probs=40.3

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSI   97 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~   97 (255)
                      +.|++++|.|+ |++|+.+++.+...|+ +|++++|+.++.++..+++
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~  211 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL  211 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            56999999998 9999999999999999 8999999988776655544

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.66  E-value=0.0026  Score=53.60  Aligned_cols=41  Identities=24%  Similarity=0.386  Sum_probs=36.5

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHH
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS   94 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~   94 (255)
                      |+ |+|+||+|++|...+..+...|++|+.+++++++.+.+.
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~  188 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK  188 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            56 999999999999999888899999999999988876553

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.64  E-value=0.0024  Score=52.83  Aligned_cols=44  Identities=18%  Similarity=0.315  Sum_probs=38.3

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK   91 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~   91 (255)
                      ..+++||.++|.|+|+-+|+.+|..|.++|++|.++.|+...++
T Consensus       155 ~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~  198 (285)
T 3p2o_A          155 EIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLS  198 (285)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHH
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHH
Confidence            35677999999999999999999999999999999987655444

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.62  E-value=0.0039  Score=52.34  Aligned_cols=40  Identities=15%  Similarity=0.091  Sum_probs=34.8

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~   93 (255)
                      .|++|+|+|| |++|...+.-+...|++|+.++ ++++.+.+
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~  181 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALA  181 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHH
Confidence            4899999999 9999999888888999999999 77766544

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.61  E-value=0.012  Score=48.66  Aligned_cols=42  Identities=26%  Similarity=0.327  Sum_probs=35.9

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHH
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDS   96 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~   96 (255)
                      +++.|.|+ |.+|.++|..|++.|++|++.+|+++.+++..+.
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            45667765 7899999999999999999999999888776655

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.60  E-value=0.013  Score=50.49  Aligned_cols=44  Identities=18%  Similarity=0.089  Sum_probs=39.0

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSD   95 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~   95 (255)
                      ..+++|+|.|+ |.+|..+++.+...|++|++.+|+.+.+++..+
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~  225 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS  225 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            45899999999 799999999999999999999999988776543

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=96.57  E-value=0.0028  Score=53.89  Aligned_cols=41  Identities=20%  Similarity=0.155  Sum_probs=36.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK   91 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~   91 (255)
                      .+.|+++.|.|. |.||.++|+.+.+.|++|++.+|+.++.+
T Consensus       152 ~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~  192 (330)
T 2gcg_A          152 GLTQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPRPE  192 (330)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCCHH
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcchh
Confidence            477999999987 89999999999999999999998875443

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.56  E-value=0.032  Score=47.16  Aligned_cols=115  Identities=20%  Similarity=0.259  Sum_probs=70.4

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhc----CCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKY----AKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      .+.+.|+|+ |.+|.+++..|+..|. +|++.|+++++++....++....    ...++..     +++       . +.
T Consensus         7 ~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-----t~d-------~-~a   72 (324)
T 3gvi_A            7 RNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-----AND-------Y-AA   72 (324)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-----ESS-------G-GG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-----eCC-------H-HH
Confidence            567899998 9999999999999998 99999999988765555555432    1222221     111       1 34


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhh-CCCcEEEEECCcc
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK-RKKGAIVNIGSGA  195 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~-~~~g~iv~vsS~~  195 (255)
                      +.  +-|++|..+|....+     .++.   ...+..|.    .+.+...+.+.+ ..++.++++|...
T Consensus        73 ~~--~aDiVIiaag~p~k~-----G~~R---~dl~~~N~----~i~~~i~~~i~~~~p~a~iivvtNPv  127 (324)
T 3gvi_A           73 IE--GADVVIVTAGVPRKP-----GMSR---DDLLGINL----KVMEQVGAGIKKYAPEAFVICITNPL  127 (324)
T ss_dssp             GT--TCSEEEECCSCCCC-------------CHHHHHHH----HHHHHHHHHHHHHCTTCEEEECCSSH
T ss_pred             HC--CCCEEEEccCcCCCC-----CCCH---HHHHHhhH----HHHHHHHHHHHHHCCCeEEEecCCCc
Confidence            45  455999999875321     1122   22344444    344444444443 3467788887643

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.54  E-value=0.0042  Score=54.20  Aligned_cols=42  Identities=14%  Similarity=0.064  Sum_probs=38.1

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~   93 (255)
                      +.+++|+|+|+ |.+|..+++.+...|++|++++++...++..
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            56999999996 8999999999999999999999999877664

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=96.53  E-value=0.003  Score=60.03  Aligned_cols=78  Identities=17%  Similarity=0.195  Sum_probs=54.5

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++|+|.||+||+|.+.+.-....|++|+.+++++ +.+.. +    . +...+    .|..+.  ++.+++.+..++.
T Consensus       345 ~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l-~----l-ga~~v----~~~~~~--~~~~~i~~~t~g~  411 (795)
T 3slk_A          345 PGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAV-E----L-SREHL----ASSRTC--DFEQQFLGATGGR  411 (795)
T ss_dssp             TTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGS-C----S-CGGGE----ECSSSS--THHHHHHHHSCSS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhh-h----c-Chhhe----eecCCh--hHHHHHHHHcCCC
Confidence            589999999999999998888888999999998765 32211 1    1 11111    232322  5667777776666


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      .+|+++++.|.
T Consensus       412 GvDvVld~~gg  422 (795)
T 3slk_A          412 GVDVVLNSLAG  422 (795)
T ss_dssp             CCSEEEECCCT
T ss_pred             CeEEEEECCCc
Confidence            78899998875

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.53  E-value=0.015  Score=53.03  Aligned_cols=64  Identities=14%  Similarity=0.154  Sum_probs=52.6

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCC-------------------hhhHHHHHHHHHhhcCCceEEE
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN-------------------PDKLKDVSDSIQAKYAKTQIKS  108 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~  108 (255)
                      -++++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+                   ..+.+.+.+.+++.++..++..
T Consensus       323 ~kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~  401 (598)
T 3vh1_A          323 DIIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATG  401 (598)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEE
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEE
Confidence            3467899999986 5899999999999997 89999755                   2578888899999888888877


Q ss_pred             EEEEC
Q 025260          109 VVVDF  113 (255)
Q Consensus       109 ~~~d~  113 (255)
                      +..++
T Consensus       402 ~~~~I  406 (598)
T 3vh1_A          402 VKLSI  406 (598)
T ss_dssp             ECCCC
T ss_pred             Eeccc
Confidence            76654

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.52  E-value=0.0065  Score=52.66  Aligned_cols=44  Identities=14%  Similarity=0.045  Sum_probs=38.6

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS   94 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~   94 (255)
                      .+.|++|+|+|+ |++|+.+++.+...|++|++.+|++.+++...
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~  212 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE  212 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            456999999996 89999999999999999999999988776543

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=96.51  E-value=0.0073  Score=64.02  Aligned_cols=83  Identities=12%  Similarity=0.147  Sum_probs=57.7

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      +|++|+|.||+||+|.+.+.-....|++|+++++++++.+.+.+.....+ ...+    .|-.+.  ++.+.+.+..++.
T Consensus      1667 ~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lg-a~~v----~~~~~~--~~~~~i~~~t~g~ 1739 (2512)
T 2vz8_A         1667 PGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLD-ETCF----ANSRDT--SFEQHVLRHTAGK 1739 (2512)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCC-STTE----EESSSS--HHHHHHHHTTTSC
T ss_pred             CCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCC-ceEE----ecCCCH--HHHHHHHHhcCCC
Confidence            48999999999999999988888899999999998877665443211111 1111    233332  5566676655555


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      .+|+++++.|
T Consensus      1740 GvDvVld~~g 1749 (2512)
T 2vz8_A         1740 GVDLVLNSLA 1749 (2512)
T ss_dssp             CEEEEEECCC
T ss_pred             CceEEEECCC
Confidence            6889998776

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.45  E-value=0.026  Score=47.51  Aligned_cols=116  Identities=20%  Similarity=0.212  Sum_probs=69.6

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCC--hhhHHHHHHHHHhhc----CCceEEEEEEECCCCcHHHHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN--PDKLKDVSDSIQAKY----AKTQIKSVVVDFSGDLDEGVERI  124 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~--~~~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~  124 (255)
                      +.+.+.|+|+ |.+|.++|..++..|. +|++.|++  ++..+....++....    ...++..     +++        
T Consensus         7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~-----t~d--------   72 (315)
T 3tl2_A            7 KRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG-----TSD--------   72 (315)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE-----ESC--------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE-----cCC--------
Confidence            3577999997 9999999999999999 99999999  555554444444321    1222221     111        


Q ss_pred             HHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCc
Q 025260          125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSG  194 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~  194 (255)
                      .+.+.  +.|++|.++|.....     ..+..   +.++.|..-.-.+.+.+..   ..+++.++++|..
T Consensus        73 ~~a~~--~aDvVIiaag~p~kp-----g~~R~---dl~~~N~~i~~~i~~~i~~---~~p~a~vlvvsNP  129 (315)
T 3tl2_A           73 YADTA--DSDVVVITAGIARKP-----GMSRD---DLVATNSKIMKSITRDIAK---HSPNAIIVVLTNP  129 (315)
T ss_dssp             GGGGT--TCSEEEECCSCCCCT-----TCCHH---HHHHHHHHHHHHHHHHHHH---HCTTCEEEECCSS
T ss_pred             HHHhC--CCCEEEEeCCCCCCC-----CCCHH---HHHHHHHHHHHHHHHHHHH---hCCCeEEEECCCh
Confidence            12344  455999999975321     23332   3445554444334444332   1346778888754

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.43  E-value=0.011  Score=49.70  Aligned_cols=40  Identities=15%  Similarity=0.131  Sum_probs=35.6

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhh
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK   89 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~   89 (255)
                      ..+.|+++.|.|. |.||.++|+.+...|++|+..+|+.++
T Consensus       138 ~~l~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~  177 (313)
T 2ekl_A          138 LELAGKTIGIVGF-GRIGTKVGIIANAMGMKVLAYDILDIR  177 (313)
T ss_dssp             CCCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred             CCCCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCCcch
Confidence            3477999999975 899999999999999999999998765

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.43  E-value=0.013  Score=49.26  Aligned_cols=39  Identities=23%  Similarity=0.261  Sum_probs=35.3

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhh
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK   89 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~   89 (255)
                      .+.|+++.|.|. |.||+++|+.+...|++|+..+|+.++
T Consensus       139 ~l~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~  177 (307)
T 1wwk_A          139 ELEGKTIGIIGF-GRIGYQVAKIANALGMNILLYDPYPNE  177 (307)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred             ccCCceEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCCh
Confidence            577999999975 899999999999999999999998765

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=96.41  E-value=0.01  Score=50.77  Aligned_cols=63  Identities=21%  Similarity=0.304  Sum_probs=49.9

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCC-------------------hhhHHHHHHHHHhhcCCceEEEE
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN-------------------PDKLKDVSDSIQAKYAKTQIKSV  109 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~  109 (255)
                      ++++.+|+|.|+ ||+|.++++.|+..|. ++.++|.+                   ..+.+.+.+.+++.+|..++..+
T Consensus        33 ~L~~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~  111 (346)
T 1y8q_A           33 RLRASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVD  111 (346)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEE
Confidence            466899999986 6999999999999998 78888643                   24677788888888877777766


Q ss_pred             EEEC
Q 025260          110 VVDF  113 (255)
Q Consensus       110 ~~d~  113 (255)
                      ..++
T Consensus       112 ~~~~  115 (346)
T 1y8q_A          112 TEDI  115 (346)
T ss_dssp             CSCG
T ss_pred             eccc
Confidence            5544

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.40  E-value=0.029  Score=47.46  Aligned_cols=116  Identities=18%  Similarity=0.130  Sum_probs=71.9

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhcC---CceEEEEEEECCCCcHHHHHHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYA---KTQIKSVVVDFSGDLDEGVERIKE  126 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~  126 (255)
                      ..+.+.|+|+ |.+|..+|..++..|.  +|++.|+++++++....++....+   ..++..  .  .|        . +
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~--t--~d--------~-~   85 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVS--G--KD--------Y-S   85 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEE--E--SS--------S-C
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEE--c--CC--------H-H
Confidence            3578999999 9999999999999997  899999999888877766665321   111111  1  11        1 1


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhh-CCCcEEEEECCcc
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK-RKKGAIVNIGSGA  195 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~-~~~g~iv~vsS~~  195 (255)
                      .+.  +-|++|..||.....     .++.   .+.+..|..-    .+...+.+.+ .+++.++++|...
T Consensus        86 ~~~--daDiVIitaG~p~kp-----G~tR---~dll~~N~~I----~k~i~~~I~k~~P~a~ilvvtNPv  141 (330)
T 3ldh_A           86 VSA--GSKLVVITAGARQQE-----GESR---LNLVQRNVNI----FKFIIPNIVKHSPDCLKELHPELG  141 (330)
T ss_dssp             SCS--SCSEEEECCSCCCCS-----SCCT---TGGGHHHHHH----HHHHHHHHHHHCTTCEEEECSSSH
T ss_pred             HhC--CCCEEEEeCCCCCCC-----CCCH---HHHHHhhHHH----HHHHHHHHHhhCCCceEEeCCCcc
Confidence            233  456999999975431     1222   2234444433    3444443433 3467788887643

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.40  E-value=0.0045  Score=53.06  Aligned_cols=75  Identities=13%  Similarity=0.155  Sum_probs=51.6

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++|+|+|+ |++|...++.+...|++|+.+++++++++.+.+ +     +... .  .|..++ .+..+++.   +  
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-l-----Ga~~-v--~~~~~~-~~~~~~~~---~--  242 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-M-----GADH-Y--IATLEE-GDWGEKYF---D--  242 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H-----TCSE-E--EEGGGT-SCHHHHSC---S--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-c-----CCCE-E--EcCcCc-hHHHHHhh---c--
Confidence            4899999999 999999998888899999999999887765432 2     2221 1  233321 01222222   2  


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      .+|++|.++|.
T Consensus       243 ~~D~vid~~g~  253 (360)
T 1piw_A          243 TFDLIVVCASS  253 (360)
T ss_dssp             CEEEEEECCSC
T ss_pred             CCCEEEECCCC
Confidence            67899999986

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=96.38  E-value=0.0072  Score=53.22  Aligned_cols=62  Identities=15%  Similarity=0.236  Sum_probs=48.2

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh-------------------hhHHHHHHHHHhhcCCceEEEEE
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKSVV  110 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~  110 (255)
                      +++.+|+|.|+ ||+|.++++.|++.|. ++.++|.+.                   .+.+.+.+.+++.+|..++..+.
T Consensus        38 L~~~~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~  116 (434)
T 1tt5_B           38 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF  116 (434)
T ss_dssp             HHTCCEEEECS-STHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEE
T ss_pred             hcCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEEe
Confidence            36788999987 7899999999999997 899986432                   46777788888877777666655


Q ss_pred             EEC
Q 025260          111 VDF  113 (255)
Q Consensus       111 ~d~  113 (255)
                      .++
T Consensus       117 ~~i  119 (434)
T 1tt5_B          117 NKI  119 (434)
T ss_dssp             SCG
T ss_pred             ccc
Confidence            443

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.33  E-value=0.0066  Score=49.89  Aligned_cols=43  Identities=5%  Similarity=0.147  Sum_probs=37.3

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~   93 (255)
                      ++||.++|.|+|+-+|+.+|+.|.++|++|.++.++...+++.
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~~~  190 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGSM  190 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHH
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHHHh
Confidence            6799999999999999999999999999999998765544443

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.31  E-value=0.0068  Score=51.91  Aligned_cols=90  Identities=17%  Similarity=0.121  Sum_probs=56.0

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHH-------HHHhhcCCceEEEEEEECCCCcHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSD-------SIQAKYAKTQIKSVVVDFSGDLDEGV  121 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~-------~~~~~~~~~~~~~~~~d~~~~~~~~~  121 (255)
                      ..+.||++.|.|. |.||+++|+.+...|++|+..+|+....+...+       ++.+.....++..+.+.++++.+..+
T Consensus       160 ~~l~gktvGIIG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li  238 (351)
T 3jtm_A          160 YDLEGKTIGTVGA-GRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMF  238 (351)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCB
T ss_pred             ccccCCEEeEEEe-CHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhh
Confidence            3577999999986 689999999999999999999998643332211       22222234566666666654433333


Q ss_pred             -HHHHHHhcCCCccEEEEecCC
Q 025260          122 -ERIKEAIEGLDVGVLINNVGI  142 (255)
Q Consensus       122 -~~~~~~~~~~~id~lv~nag~  142 (255)
                       ++..+.++..   .++-|.|.
T Consensus       239 ~~~~l~~mk~g---ailIN~aR  257 (351)
T 3jtm_A          239 NKELIGKLKKG---VLIVNNAR  257 (351)
T ss_dssp             SHHHHHHSCTT---EEEEECSC
T ss_pred             cHHHHhcCCCC---CEEEECcC
Confidence             3333444432   44444544

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.31  E-value=0.045  Score=46.12  Aligned_cols=115  Identities=16%  Similarity=0.278  Sum_probs=68.8

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhcCC-ceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAK-TQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      ..+.|+|| |.+|.+++..++..+.  +|++.|+++++++....++....+. ..+... .|   .        .+++. 
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~---~--------~~a~~-   71 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG---E--------YSDCK-   71 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC---C--------GGGGT-
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC---C--------HHHhC-
Confidence            57899998 9999999999999885  8999999998888767777654210 111111 11   1        22344 


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECCcc
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGA  195 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS~~  195 (255)
                       +-|++|..+|.....     ..+.   ...+..|.-    +++.+.+.+.+. ..+.++++|...
T Consensus        72 -~aDvVii~ag~~~~~-----g~~R---~dl~~~n~~----i~~~i~~~i~~~~p~a~iiv~tNPv  124 (318)
T 1ez4_A           72 -DADLVVITAGAPQKP-----GESR---LDLVNKNLN----ILSSIVKPVVDSGFDGIFLVAANPV  124 (318)
T ss_dssp             -TCSEEEECCCC------------------CHHHHHH----HHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred             -CCCEEEECCCCCCCC-----CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEeCCcH
Confidence             455999999875321     1121   123344433    444444545443 467888876543

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.29  E-value=0.0078  Score=50.27  Aligned_cols=43  Identities=26%  Similarity=0.257  Sum_probs=37.8

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD   92 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~   92 (255)
                      ..++|++++|.|+ |+||+++++.+...|++|++.+|+.++.++
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~  195 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLAR  195 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            3567999999996 899999999999999999999999876543

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.29  E-value=0.0034  Score=51.84  Aligned_cols=44  Identities=23%  Similarity=0.356  Sum_probs=38.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS   94 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~   94 (255)
                      +++++.++|.|+ |++|+++++.|.+.|++|.+.+|+.++.++..
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~  169 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLA  169 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHT
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence            456899999996 79999999999999999999999987766543

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=96.27  E-value=0.0068  Score=51.54  Aligned_cols=39  Identities=18%  Similarity=0.284  Sum_probs=35.5

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhh
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK   89 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~   89 (255)
                      .+.|+++.|.|. |.||.++|+.+...|++|+..+|+.+.
T Consensus       147 ~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~  185 (334)
T 2dbq_A          147 DVYGKTIGIIGL-GRIGQAIAKRAKGFNMRILYYSRTRKE  185 (334)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred             CCCCCEEEEEcc-CHHHHHHHHHHHhCCCEEEEECCCcch
Confidence            477999999985 999999999999999999999998765

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=96.26  E-value=0.018  Score=47.85  Aligned_cols=86  Identities=16%  Similarity=0.205  Sum_probs=54.5

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHH-----HHHHHHhhcCCceEEEEEEECCCCcHHHH-HH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD-----VSDSIQAKYAKTQIKSVVVDFSGDLDEGV-ER  123 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~-----~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~  123 (255)
                      .+.||++.|.|. |.||.++|+.+...|++|+..+|+.+..+.     ..+++-+   ..++..+.+..+++.+..+ ++
T Consensus       119 ~l~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~l~ell~---~aDiV~l~~P~t~~t~~li~~~  194 (290)
T 3gvx_A          119 LLYGKALGILGY-GGIGRRVAHLAKAFGMRVIAYTRSSVDQNVDVISESPADLFR---QSDFVLIAIPLTDKTRGMVNSR  194 (290)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSCCCTTCSEECSSHHHHHH---HCSEEEECCCCCTTTTTCBSHH
T ss_pred             eeecchheeecc-CchhHHHHHHHHhhCcEEEEEeccccccccccccCChHHHhh---ccCeEEEEeeccccchhhhhHH
Confidence            477999999985 799999999999999999999998643221     1122211   3466777776665443333 23


Q ss_pred             HHHHhcCCCccEEEEecCC
Q 025260          124 IKEAIEGLDVGVLINNVGI  142 (255)
Q Consensus       124 ~~~~~~~~~id~lv~nag~  142 (255)
                      ..+.++   .+.++-|.|.
T Consensus       195 ~l~~mk---~gailIN~aR  210 (290)
T 3gvx_A          195 LLANAR---KNLTIVNVAR  210 (290)
T ss_dssp             HHTTCC---TTCEEEECSC
T ss_pred             HHhhhh---cCceEEEeeh
Confidence            333333   3345555554

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=96.25  E-value=0.016  Score=49.28  Aligned_cols=86  Identities=17%  Similarity=0.175  Sum_probs=51.0

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHH-----HHHHHHhhcCCceEEEEEEECCCCcHHHH-H
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD-----VSDSIQAKYAKTQIKSVVVDFSGDLDEGV-E  122 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~-----~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~  122 (255)
                      ..++||++.|.|. |.||+++|+.+...|++|+..+|+......     ..+++-+   ..++.++.+..+++.+..+ +
T Consensus       167 ~~l~gktiGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~sl~ell~---~aDvVil~vP~t~~t~~li~~  242 (340)
T 4dgs_A          167 HSPKGKRIGVLGL-GQIGRALASRAEAFGMSVRYWNRSTLSGVDWIAHQSPVDLAR---DSDVLAVCVAASAATQNIVDA  242 (340)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCTTSCCEECSSHHHHHH---TCSEEEECC----------CH
T ss_pred             ccccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCcccccCceecCCHHHHHh---cCCEEEEeCCCCHHHHHHhhH
Confidence            3577999999987 799999999999999999999988643110     1122222   4567776666665444444 4


Q ss_pred             HHHHHhcCCCccEEEEec
Q 025260          123 RIKEAIEGLDVGVLINNV  140 (255)
Q Consensus       123 ~~~~~~~~~~id~lv~na  140 (255)
                      +..+.++...  ++||.+
T Consensus       243 ~~l~~mk~ga--ilIN~a  258 (340)
T 4dgs_A          243 SLLQALGPEG--IVVNVA  258 (340)
T ss_dssp             HHHHHTTTTC--EEEECS
T ss_pred             HHHhcCCCCC--EEEECC
Confidence            4444454433  455544

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.25  E-value=0.073  Score=44.68  Aligned_cols=116  Identities=23%  Similarity=0.274  Sum_probs=68.2

Q ss_pred             EEEEECCCCchHHHHHHHHHHc-C--CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           55 WALVTGPTDGIGKSFAFQLAKT-G--LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~-G--~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|.|+||+|.+|.+++..|+++ +  .++++.|+++ +.+....++.......++..+   .+++       ..+.+.  
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~---~~~~-------~~~~~~--   68 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGF---SGED-------ATPALE--   68 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEE---CSSC-------CHHHHT--
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEe---cCCC-------cHHHhC--
Confidence            5789999999999999999886 5  4799999987 444444555543111112111   1111       233445  


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCc
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSG  194 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~  194 (255)
                      +.|++|..||....     ..++.   .+.++.|..-.-.+.+.+..   ..+++.++++|..
T Consensus        69 ~aDivii~ag~~rk-----pG~~R---~dll~~N~~I~~~i~~~i~~---~~p~a~vlvvtNP  120 (312)
T 3hhp_A           69 GADVVLISAGVARK-----PGMDR---SDLFNVNAGIVKNLVQQVAK---TCPKACIGIITNP  120 (312)
T ss_dssp             TCSEEEECCSCSCC-----TTCCH---HHHHHHHHHHHHHHHHHHHH---HCTTSEEEECSSC
T ss_pred             CCCEEEEeCCCCCC-----CCCCH---HHHHHHHHHHHHHHHHHHHH---HCCCcEEEEecCc
Confidence            45599999997532     12343   33455555444444444333   1346778888753

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.24  E-value=0.055  Score=45.72  Aligned_cols=116  Identities=13%  Similarity=0.255  Sum_probs=70.6

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhcC-CceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYA-KTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      ...+.|+|| |.+|.+++..++..+.  +|++.|+++++++....++....+ ...+... .|   .        .+.+.
T Consensus         9 ~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~---~--------~~a~~   75 (326)
T 2zqz_A            9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-SA---E--------YSDAK   75 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC---C--------GGGGG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-EC---C--------HHHhC
Confidence            467999999 9999999999998885  799999999888877777765321 0111111 11   1        22344


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhh-CCCcEEEEECCcc
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK-RKKGAIVNIGSGA  195 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~-~~~g~iv~vsS~~  195 (255)
                        +-|++|..+|.....     ..+.+   ..+..|.-    +++.+.+.+.+ ...+.++++|...
T Consensus        76 --~aDvVii~ag~~~k~-----g~~R~---dl~~~n~~----i~~~i~~~i~~~~p~a~iiv~tNPv  128 (326)
T 2zqz_A           76 --DADLVVITAGAPQKP-----GETRL---DLVNKNLK----ILKSIVDPIVDSGFNGIFLVAANPV  128 (326)
T ss_dssp             --GCSEEEECCCCC----------CHH---HHHHHHHH----HHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred             --CCCEEEEcCCCCCCC-----CCCHH---HHHHHHHH----HHHHHHHHHHHHCCCeEEEEeCCcH
Confidence              345999999875321     22332   23344443    44444444433 3568888876544

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.23  E-value=0.0068  Score=50.07  Aligned_cols=45  Identities=27%  Similarity=0.419  Sum_probs=38.4

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD   92 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~   92 (255)
                      ..+++||.++|.|.|+-+|+.+|..|.++|++|.++.+....+++
T Consensus       156 ~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~~  200 (286)
T 4a5o_A          156 GADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLAD  200 (286)
T ss_dssp             TCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHHH
T ss_pred             CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHHH
Confidence            356779999999999999999999999999999998875554443

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.19  E-value=0.0083  Score=49.93  Aligned_cols=42  Identities=21%  Similarity=0.305  Sum_probs=36.8

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhh
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK   89 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~   89 (255)
                      ..+++||.++|.|+|+-+|+.+|..|.++|++|.++.|....
T Consensus       160 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~  201 (300)
T 4a26_A          160 GIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTST  201 (300)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCH
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence            356779999999999999999999999999999999875443

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=96.18  E-value=0.0096  Score=54.77  Aligned_cols=65  Identities=25%  Similarity=0.332  Sum_probs=52.4

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh-------------------hhHHHHHHHHHhhcCCceEEEE
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKSV  109 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~  109 (255)
                      ++.+.+|+|.|+ ||+|.++++.|++.|. ++.++|.+.                   .+.+.+.+.+++.+|..++..+
T Consensus        14 kL~~s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v~V~a~   92 (640)
T 1y8q_B           14 AVAGGRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAY   92 (640)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTCEEEEE
T ss_pred             HHhcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCCeEEEE
Confidence            355788999987 8999999999999997 899988652                   3466677788888888888888


Q ss_pred             EEECCC
Q 025260          110 VVDFSG  115 (255)
Q Consensus       110 ~~d~~~  115 (255)
                      ..++++
T Consensus        93 ~~~i~~   98 (640)
T 1y8q_B           93 HDSIMN   98 (640)
T ss_dssp             ESCTTS
T ss_pred             ecccch
Confidence            777754

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.18  E-value=0.029  Score=48.76  Aligned_cols=43  Identities=14%  Similarity=0.093  Sum_probs=38.2

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS   94 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~   94 (255)
                      ..+.+|+|.|+ |.+|..+++.+...|++|++.++++..++...
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  230 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA  230 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            45889999999 79999999999999999999999998766554

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.17  E-value=0.0087  Score=48.93  Aligned_cols=46  Identities=30%  Similarity=0.527  Sum_probs=39.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI   97 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~   97 (255)
                      +++| .++|.|+ |++|+++++.|.+.|++|.+.+|+.++.++..++.
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~  159 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF  159 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence            4568 8999997 78999999999999999999999988777665543

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=96.15  E-value=0.025  Score=47.94  Aligned_cols=79  Identities=13%  Similarity=0.011  Sum_probs=49.3

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcE-EEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNL-VLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V-~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++|+|+|+ ||+|...+..+...|+++ +.+++++++++.+ ++   .+  ...   ..|..+.  +..+.+.+..+.
T Consensus       160 ~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a-~~---lG--a~~---~i~~~~~--~~~~~~~~~~~~  227 (346)
T 4a2c_A          160 ENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALA-KS---FG--AMQ---TFNSSEM--SAPQMQSVLREL  227 (346)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HH---TT--CSE---EEETTTS--CHHHHHHHHGGG
T ss_pred             CCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHH-HH---cC--CeE---EEeCCCC--CHHHHHHhhccc
Confidence            4899999987 899999998888899865 6778887765533 22   22  221   2344432  222333332333


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                      ...|+++.++|.
T Consensus       228 ~g~d~v~d~~G~  239 (346)
T 4a2c_A          228 RFNQLILETAGV  239 (346)
T ss_dssp             CSSEEEEECSCS
T ss_pred             CCcccccccccc
Confidence            356788888773

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=96.14  E-value=0.018  Score=49.01  Aligned_cols=76  Identities=14%  Similarity=0.156  Sum_probs=47.5

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcC-CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G-~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++|+|+||+|++|...+.-+...| ++|+.++ +.++.+...     .+  ... .  .| .+.  +..+++.+..+ 
T Consensus       142 ~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-----~g--a~~-~--~~-~~~--~~~~~~~~~~~-  206 (349)
T 4a27_A          142 EGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-----DS--VTH-L--FD-RNA--DYVQEVKRISA-  206 (349)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-----GG--SSE-E--EE-TTS--CHHHHHHHHCT-
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-----cC--CcE-E--Ec-CCc--cHHHHHHHhcC-
Confidence            48999999999999998877666665 6788877 444443221     22  211 2  23 222  34445555433 


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                      ..+|+++.++|.
T Consensus       207 ~g~Dvv~d~~g~  218 (349)
T 4a27_A          207 EGVDIVLDCLCG  218 (349)
T ss_dssp             TCEEEEEEECC-
T ss_pred             CCceEEEECCCc
Confidence            368899999984

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.13  E-value=0.0071  Score=49.97  Aligned_cols=43  Identities=21%  Similarity=0.373  Sum_probs=36.8

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL   90 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~   90 (255)
                      ..+++||.++|.|+|+-+|+.+|..|.++|++|.++.|+...+
T Consensus       156 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L  198 (285)
T 3l07_A          156 GIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDL  198 (285)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSH
T ss_pred             CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhH
Confidence            3567799999999999999999999999999999987654433

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.12  E-value=0.032  Score=47.35  Aligned_cols=90  Identities=11%  Similarity=0.086  Sum_probs=56.3

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHH------HHHhhcCCceEEEEEEECCCCcHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSD------SIQAKYAKTQIKSVVVDFSGDLDEGVER  123 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~------~~~~~~~~~~~~~~~~d~~~~~~~~~~~  123 (255)
                      .+.|+++.|.|- |.||.++|+.+...|++|+..+|+.++. ...+      ++.+.....++....+..+++.+..+. 
T Consensus       162 ~l~g~tvgIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~-  238 (335)
T 2g76_A          162 ELNGKTLGILGL-GRIGREVATRMQSFGMKTIGYDPIISPE-VSASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLN-  238 (335)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSCHH-HHHHTTCEECCHHHHGGGCSEEEECCCCCTTTTTSBC-
T ss_pred             CCCcCEEEEEeE-CHHHHHHHHHHHHCCCEEEEECCCcchh-hhhhcCceeCCHHHHHhcCCEEEEecCCCHHHHHhhC-
Confidence            477999999975 8999999999999999999999986542 1111      122222245666666666554333331 


Q ss_pred             HHHHhcCCCccEEEEecCCC
Q 025260          124 IKEAIEGLDVGVLINNVGIS  143 (255)
Q Consensus       124 ~~~~~~~~~id~lv~nag~~  143 (255)
                       .+.+...+.+.++-|.|..
T Consensus       239 -~~~l~~mk~gailIN~arg  257 (335)
T 2g76_A          239 -DNTFAQCKKGVRVVNCARG  257 (335)
T ss_dssp             -HHHHTTSCTTEEEEECSCT
T ss_pred             -HHHHhhCCCCcEEEECCCc
Confidence             1223333334565566553

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.12  E-value=0.011  Score=49.19  Aligned_cols=42  Identities=26%  Similarity=0.281  Sum_probs=37.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD   92 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~   92 (255)
                      +++|++++|.|+ |+||+++++.+...|++|++.+|+.++.++
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~  193 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLAR  193 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            466999999995 899999999999999999999999876543

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.11  E-value=0.008  Score=47.43  Aligned_cols=79  Identities=13%  Similarity=0.186  Sum_probs=48.3

Q ss_pred             cccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHH
Q 025260           47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKE  126 (255)
Q Consensus        47 ~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  126 (255)
                      ++.++.++.+.|.| .|.+|.++|..|++.|.+|.+.+|+++           .-...++.++-+. .+..++.++++..
T Consensus        13 ~~~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~-----------~~~~aD~vi~av~-~~~~~~v~~~l~~   79 (209)
T 2raf_A           13 ENLYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ-----------ATTLGEIVIMAVP-YPALAALAKQYAT   79 (209)
T ss_dssp             -------CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC-----------CSSCCSEEEECSC-HHHHHHHHHHTHH
T ss_pred             cccccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH-----------HhccCCEEEEcCC-cHHHHHHHHHHHH
Confidence            45566788899999 689999999999999999999999876           1113444444332 2233455555555


Q ss_pred             HhcCCCccEEEEecC
Q 025260          127 AIEGLDVGVLINNVG  141 (255)
Q Consensus       127 ~~~~~~id~lv~nag  141 (255)
                      .++ ..  ++++.+.
T Consensus        80 ~~~-~~--~vi~~~~   91 (209)
T 2raf_A           80 QLK-GK--IVVDITN   91 (209)
T ss_dssp             HHT-TS--EEEECCC
T ss_pred             hcC-CC--EEEEECC
Confidence            444 23  5665544

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.09  E-value=0.011  Score=49.90  Aligned_cols=42  Identities=21%  Similarity=0.397  Sum_probs=35.7

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS   94 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~   94 (255)
                      +.+++.|.|+ |.+|..+|+.|++.|++|.+.+|++++.++..
T Consensus        30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~   71 (320)
T 4dll_A           30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLA   71 (320)
T ss_dssp             CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHH
Confidence            3567777765 89999999999999999999999998877654

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.08  E-value=0.0064  Score=49.62  Aligned_cols=41  Identities=20%  Similarity=0.396  Sum_probs=35.9

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDV   93 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~   93 (255)
                      ++| .++|.|+ ||.|++++..|++.|+ +|.+.+|+.++.++.
T Consensus       107 ~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~l  148 (253)
T 3u62_A          107 VKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKAL  148 (253)
T ss_dssp             CCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTC
T ss_pred             CCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            457 8999987 8999999999999998 899999998876554

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.06  E-value=0.014  Score=48.69  Aligned_cols=37  Identities=19%  Similarity=0.224  Sum_probs=33.2

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhh
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK   89 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~   89 (255)
                      .+.+.|.||.|.+|.++++.|.+.|++|.+.+|+++.
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~   57 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA   57 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc
Confidence            4578899999999999999999999999999998753

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=96.06  E-value=0.01  Score=49.01  Aligned_cols=47  Identities=21%  Similarity=0.408  Sum_probs=40.0

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS   94 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~   94 (255)
                      ..+++||.++|.|+|.-+|+.+|+.|.++|++|.++.+....+++..
T Consensus       154 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~  200 (288)
T 1b0a_A          154 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHV  200 (288)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHH
T ss_pred             CCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHHHh
Confidence            34677999999999999999999999999999999987766555443

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.05  E-value=0.14  Score=43.10  Aligned_cols=115  Identities=14%  Similarity=0.314  Sum_probs=68.4

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhcC--CceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYA--KTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      ...+.|+|| |.+|..++..|+.+|.  +|++.|+++++++....++....+  +..+... .|   .        .+.+
T Consensus         6 ~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~---~--------~~a~   72 (317)
T 3d0o_A            6 GNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG---E--------YSDC   72 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC---C--------GGGG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC---C--------HHHh
Confidence            457889998 9999999999999884  899999998877755555543211  1112221 12   1        2234


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECCc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSG  194 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS~  194 (255)
                      .  +-|++|..+|.....     ..+..   ..+..|.-    +++.+.+.+.+. .++.++++|..
T Consensus        73 ~--~aDvVvi~ag~~~~~-----g~~r~---dl~~~n~~----i~~~i~~~i~~~~p~a~viv~tNP  125 (317)
T 3d0o_A           73 H--DADLVVICAGAAQKP-----GETRL---DLVSKNLK----IFKSIVGEVMASKFDGIFLVATNP  125 (317)
T ss_dssp             T--TCSEEEECCCCCCCT-----TCCHH---HHHHHHHH----HHHHHHHHHHHTTCCSEEEECSSS
T ss_pred             C--CCCEEEECCCCCCCC-----CCcHH---HHHHHHHH----HHHHHHHHHHHhCCCcEEEEecCc
Confidence            4  455999999875321     22332   23344443    344444444433 46777776543

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.04  E-value=0.0067  Score=50.24  Aligned_cols=40  Identities=23%  Similarity=0.352  Sum_probs=34.3

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHH
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS   94 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~   94 (255)
                      +++.|.|+ |.+|..+++.|++.|++|++.+|++++.++..
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~   41 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELA   41 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH
Confidence            45777775 89999999999999999999999998776654

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=96.04  E-value=0.0037  Score=52.91  Aligned_cols=39  Identities=23%  Similarity=0.324  Sum_probs=34.6

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD   88 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~   88 (255)
                      ..++||++.|.|. |.||+++|+.+...|++|+..+|+..
T Consensus       133 ~~l~gktvGIiGl-G~IG~~vA~~l~~~G~~V~~~dr~~~  171 (324)
T 3evt_A          133 STLTGQQLLIYGT-GQIGQSLAAKASALGMHVIGVNTTGH  171 (324)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred             ccccCCeEEEECc-CHHHHHHHHHHHhCCCEEEEECCCcc
Confidence            3577999999976 69999999999999999999998754

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.03  E-value=0.0058  Score=48.93  Aligned_cols=39  Identities=13%  Similarity=0.087  Sum_probs=33.3

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~   93 (255)
                      .+.++|.|+ |.+|..++++|.+.|+ |++++++++..++.
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~   47 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVL   47 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHH
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHH
Confidence            467889997 8999999999999999 99999998876543

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.00  E-value=0.033  Score=45.95  Aligned_cols=85  Identities=15%  Similarity=0.176  Sum_probs=55.4

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCC---cEEEEeCChhhHHHHHHHH--------HhhcCCceEEEEEEECCCCcHHHHH
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGL---NLVLVGRNPDKLKDVSDSI--------QAKYAKTQIKSVVVDFSGDLDEGVE  122 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~---~V~l~~r~~~~~~~~~~~~--------~~~~~~~~~~~~~~d~~~~~~~~~~  122 (255)
                      +++.|.|+ |.+|.++++.|++.|+   +|.+.+|+++++++..++.        .+.-...++.++-+. .+.+++.++
T Consensus         4 ~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~-p~~~~~vl~   81 (280)
T 3tri_A            4 SNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVK-PHQIKMVCE   81 (280)
T ss_dssp             SCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSC-GGGHHHHHH
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeC-HHHHHHHHH
Confidence            45777777 8999999999999998   8999999998877766531        111113344443332 223466667


Q ss_pred             HHHHH-hcCCCccEEEEecCC
Q 025260          123 RIKEA-IEGLDVGVLINNVGI  142 (255)
Q Consensus       123 ~~~~~-~~~~~id~lv~nag~  142 (255)
                      ++... ++...  ++|.+++.
T Consensus        82 ~l~~~~l~~~~--iiiS~~ag  100 (280)
T 3tri_A           82 ELKDILSETKI--LVISLAVG  100 (280)
T ss_dssp             HHHHHHHTTTC--EEEECCTT
T ss_pred             HHHhhccCCCe--EEEEecCC
Confidence            77665 54433  67766553

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=95.99  E-value=0.093  Score=44.07  Aligned_cols=113  Identities=16%  Similarity=0.226  Sum_probs=67.3

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhc----CCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKY----AKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      .+.|+|+ |.+|.+++..+++.|.  +|++.|+++++++....++....    .+.++..  .|.           .+.+
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~--~~~-----------~~a~   67 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTG--TND-----------YGPT   67 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEE--ESS-----------SGGG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEE--CCC-----------HHHh
Confidence            4788997 9999999999999986  89999999988776655665421    1222221  121           1234


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECCcc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGA  195 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS~~  195 (255)
                      .  +-|++|..||.....     .++.   .+.++.|.-    +++...+.+.+. +++.++++|...
T Consensus        68 ~--~aDvVii~ag~~~kp-----G~~R---~dl~~~N~~----i~~~i~~~i~~~~p~a~vivvtNPv  121 (314)
T 3nep_X           68 E--DSDVCIITAGLPRSP-----GMSR---DDLLAKNTE----IVGGVTEQFVEGSPDSTIIVVANPL  121 (314)
T ss_dssp             T--TCSEEEECCCC------------C---HHHHHHHHH----HHHHHHHHHHTTCTTCEEEECCSSH
T ss_pred             C--CCCEEEECCCCCCCC-----CCCH---HHHHHhhHH----HHHHHHHHHHHhCCCcEEEecCCch
Confidence            4  455999999975321     1222   223444443    344444545443 467788877543

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=95.99  E-value=0.0065  Score=51.97  Aligned_cols=41  Identities=22%  Similarity=0.228  Sum_probs=35.7

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHH-HcCCcEEEEeCChhhHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLA-KTGLNLVLVGRNPDKLK   91 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la-~~G~~V~l~~r~~~~~~   91 (255)
                      .++|+++.|.|. |.||+++|+.+. ..|++|+..+|+....+
T Consensus       160 ~l~g~~vgIIG~-G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~  201 (348)
T 2w2k_A          160 NPRGHVLGAVGL-GAIQKEIARKAVHGLGMKLVYYDVAPADAE  201 (348)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSCCCHH
T ss_pred             CCCCCEEEEEEE-CHHHHHHHHHHHHhcCCEEEEECCCCcchh
Confidence            467999999985 899999999999 99999999999875443

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=95.99  E-value=0.046  Score=46.32  Aligned_cols=77  Identities=14%  Similarity=0.201  Sum_probs=52.2

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhc----CCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKY----AKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      ...+.|.|| |.+|.++|..|++.|. +|.+.|++++.++....++....    ...++..     +.+       +.+.
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-----t~d-------~~ea   75 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-----EYS-------YEAA   75 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-----ECS-------HHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-----eCC-------HHHH
Confidence            457889998 9999999999999997 99999999988776444443321    1111211     122       2334


Q ss_pred             hcCCCccEEEEecCCCC
Q 025260          128 IEGLDVGVLINNVGISY  144 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~  144 (255)
                      +.+  -|++|..+|...
T Consensus        76 ~~~--aDiVi~a~g~p~   90 (331)
T 1pzg_A           76 LTG--ADCVIVTAGLTK   90 (331)
T ss_dssp             HTT--CSEEEECCSCSS
T ss_pred             hCC--CCEEEEccCCCC
Confidence            453  459999998753

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=95.99  E-value=0.082  Score=44.14  Aligned_cols=113  Identities=19%  Similarity=0.261  Sum_probs=62.6

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhcC---CceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYA---KTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      .+.|+|+ |.+|..++..|+..|.  +|++.|+++++++....++....+   ..++.   .+  +         .+.+.
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~---~~--~---------~~a~~   66 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVW---HG--G---------HSELA   66 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEE---EE--C---------GGGGT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEE---EC--C---------HHHhC
Confidence            5789998 9999999999999998  899999998877654444433211   11121   11  1         12344


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcc
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGA  195 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~  195 (255)
                        +.|++|.++|.....     ..+.   ...+..|..-.-.+.+.+.++   .+++.++++|...
T Consensus        67 --~aDvVIi~~~~~~~~-----g~~r---~dl~~~n~~i~~~i~~~i~~~---~p~~~vi~~tNP~  119 (304)
T 2v6b_A           67 --DAQVVILTAGANQKP-----GESR---LDLLEKNADIFRELVPQITRA---APDAVLLVTSNPV  119 (304)
T ss_dssp             --TCSEEEECC--------------------CHHHHHHHHHHHHHHHHHH---CSSSEEEECSSSH
T ss_pred             --CCCEEEEcCCCCCCC-----CCcH---HHHHHhHHHHHHHHHHHHHHh---CCCeEEEEecCch
Confidence              455999999864321     1111   223444544444444444442   3456666665433

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=95.97  E-value=0.013  Score=48.38  Aligned_cols=45  Identities=18%  Similarity=0.296  Sum_probs=39.2

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSI   97 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~   97 (255)
                      .++.++|.|+ ||.|++++..|++.|+ +|.+++|+.++.++..+++
T Consensus       118 ~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~  163 (271)
T 1npy_A          118 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY  163 (271)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            3678999985 7999999999999997 8999999998888776655

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=95.95  E-value=0.13  Score=42.69  Aligned_cols=114  Identities=13%  Similarity=0.125  Sum_probs=70.0

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhcC--CceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYA--KTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|.|+|+ |+||..+|..|..++.  ++++.|.+++..+....++....+  +........   ++        .+.+. 
T Consensus         2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~---~d--------~~~~~-   68 (294)
T 2x0j_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG---AD--------YSLLK-   68 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE---SC--------GGGGT-
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC---CC--------HHHhC-
Confidence            3678895 9999999999998874  799999999877766667765321  111112211   11        01334 


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCc
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSG  194 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~  194 (255)
                       +-|++|..||....     ..++.++   .++.|.    .+++.+.+.+.+.. ++.++.+|..
T Consensus        69 -~aDvVvitAG~prk-----pGmtR~d---Ll~~Na----~I~~~i~~~i~~~~p~aivlvvsNP  120 (294)
T 2x0j_A           69 -GSEIIVVTAGLARK-----PGMTRLD---LAHKNA----GIIKDIAKKIVENAPESKILVVTNP  120 (294)
T ss_dssp             -TCSEEEECCCCCCC-----SSSCHHH---HHHHHH----HHHHHHHHHHHTTSTTCEEEECSSS
T ss_pred             -CCCEEEEecCCCCC-----CCCchHH---HHHHHH----HHHHHHHHHHHhcCCceEEEEecCc
Confidence             45599999997543     1345543   344454    35555555555443 5666666653

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=95.95  E-value=0.01  Score=49.38  Aligned_cols=45  Identities=16%  Similarity=0.184  Sum_probs=38.5

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD   92 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~   92 (255)
                      ..+++|+.|+|.|++.-+|+.+|+.|.++|++|.++.++...+++
T Consensus       160 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~  204 (301)
T 1a4i_A          160 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDE  204 (301)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHH
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccHHH
Confidence            356779999999999999999999999999999999776555443

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=95.92  E-value=0.012  Score=50.70  Aligned_cols=39  Identities=15%  Similarity=0.053  Sum_probs=34.6

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCc-EEEEeCChhh
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLN-LVLVGRNPDK   89 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~-V~l~~r~~~~   89 (255)
                      .+.|+++.|.|. |.||.++|+.+...|++ |+..+|+...
T Consensus       161 ~l~g~tvgIIG~-G~IG~~vA~~l~~~G~~~V~~~d~~~~~  200 (364)
T 2j6i_A          161 DIEGKTIATIGA-GRIGYRVLERLVPFNPKELLYYDYQALP  200 (364)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHGGGCCSEEEEECSSCCC
T ss_pred             cCCCCEEEEECc-CHHHHHHHHHHHhCCCcEEEEECCCccc
Confidence            577999999986 89999999999999998 9999987643

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=95.91  E-value=0.02  Score=48.79  Aligned_cols=90  Identities=16%  Similarity=0.133  Sum_probs=55.2

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHH-----HHHHhhcCCceEEEEEEECCCCcHHHH-H
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS-----DSIQAKYAKTQIKSVVVDFSGDLDEGV-E  122 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~d~~~~~~~~~-~  122 (255)
                      ..++||++.|.|- |.||+++|+.+...|++|+..+|+....+...     +++.+.....++..+.+.++++.+..+ +
T Consensus       169 ~~l~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~  247 (345)
T 4g2n_A          169 MGLTGRRLGIFGM-GRIGRAIATRARGFGLAIHYHNRTRLSHALEEGAIYHDTLDSLLGASDIFLIAAPGRPELKGFLDH  247 (345)
T ss_dssp             CCCTTCEEEEESC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHTTCEECSSHHHHHHTCSEEEECSCCCGGGTTCBCH
T ss_pred             cccCCCEEEEEEe-ChhHHHHHHHHHHCCCEEEEECCCCcchhhhcCCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCH
Confidence            3477999999985 89999999999999999999999853322110     112221124567776666654333333 3


Q ss_pred             HHHHHhcCCCccEEEEecCC
Q 025260          123 RIKEAIEGLDVGVLINNVGI  142 (255)
Q Consensus       123 ~~~~~~~~~~id~lv~nag~  142 (255)
                      +..+.++.   +.++-|.|.
T Consensus       248 ~~l~~mk~---gailIN~aR  264 (345)
T 4g2n_A          248 DRIAKIPE---GAVVINISR  264 (345)
T ss_dssp             HHHHHSCT---TEEEEECSC
T ss_pred             HHHhhCCC---CcEEEECCC
Confidence            33334443   245445554

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=95.91  E-value=0.046  Score=46.14  Aligned_cols=114  Identities=16%  Similarity=0.214  Sum_probs=70.3

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhc----CCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKY----AKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      .+.+.|+|+ |.+|.+++..|+..|. +|++.|+++++++....++.+..    ...++..     +++        .+.
T Consensus         5 ~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~-----t~d--------~~a   70 (321)
T 3p7m_A            5 RKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRG-----TND--------YKD   70 (321)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE-----ESC--------GGG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEE-----cCC--------HHH
Confidence            456888885 9999999999999987 99999999988776666665431    1222221     111        134


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECCc
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSG  194 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS~  194 (255)
                      +.  +-|++|..+|....+     .++..+   .+..|..-    .+...+.+.+. +++.++++|..
T Consensus        71 ~~--~aDvVIi~ag~p~k~-----G~~R~d---l~~~N~~i----~~~i~~~i~~~~p~a~vivvtNP  124 (321)
T 3p7m_A           71 LE--NSDVVIVTAGVPRKP-----GMSRDD---LLGINIKV----MQTVGEGIKHNCPNAFVICITNP  124 (321)
T ss_dssp             GT--TCSEEEECCSCCCCT-----TCCHHH---HHHHHHHH----HHHHHHHHHHHCTTCEEEECCSS
T ss_pred             HC--CCCEEEEcCCcCCCC-----CCCHHH---HHHHhHHH----HHHHHHHHHHHCCCcEEEEecCc
Confidence            44  355999999975321     234332   34444444    44444444433 46778887653

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=95.91  E-value=0.12  Score=43.33  Aligned_cols=45  Identities=18%  Similarity=0.149  Sum_probs=37.9

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHh
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQA   99 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~   99 (255)
                      +.+.|+|| |.+|..++..++..|. +|++.|+++++++....++.+
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~   48 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYE   48 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHH
Confidence            46889999 9999999999999996 899999998877765555543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	255
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	9e-37
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	5e-33
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	1e-32
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	4e-30
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	1e-29
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	2e-29
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	3e-29
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	1e-28
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	4e-28
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	5e-28
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	7e-28
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	2e-27
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	4e-27
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	5e-27
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	5e-27
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	7e-27
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	7e-27
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	7e-27
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-26
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	4e-26
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-26
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	6e-26
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	3e-25
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-25
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	4e-25
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	7e-25
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	9e-25
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	1e-24
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	3e-24
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	6e-24
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	6e-24
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	1e-23
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	2e-23
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	4e-23
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	9e-23
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-21
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	3e-21
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	9e-21
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	1e-20
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	2e-20
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	2e-19
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	6e-19
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	2e-18
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	2e-18
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	1e-17
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-17
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	3e-17
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	3e-17
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	5e-17
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	6e-17
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	8e-17
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	1e-16
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	2e-16
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	3e-16
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	3e-16
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-16
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-15
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	3e-15
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	8e-15
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	3e-14
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	7e-11
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-08
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	3e-08
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	1e-07
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	1e-07
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	2e-05
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	4e-05
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	1e-04
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	2e-04
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	4e-04
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	5e-04
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	0.003
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	0.003

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  128 bits (323), Expect = 9e-37
 Identities = 44/187 (23%), Positives = 79/187 (42%), Gaps = 8/187 (4%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           ALVTG + GIG + A  L + GL +V   R    +++++   ++      +     D S 
Sbjct: 13  ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN 72

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
             D+      I+    G+D  + INN G++ P             K++  VNV   +  T
Sbjct: 73  EEDILSMFSAIRSQHSGVD--ICINNAGLARP--DTLLSGSTSGWKDMFNVNVLALSICT 128

Query: 174 QAVLPGMLKRK--KGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           +     M +R    G I+NI S +   +    +   Y+ATK  +   +  L  E R++  
Sbjct: 129 REAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQT 188

Query: 232 DVQCQVL 238
            ++   +
Sbjct: 189 HIRATCI 195

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (296), Expect = 5e-33
 Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 9/186 (4%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G   L+TG   GIG+  A++ AK    LVL   N   L++ +   +   AK     V   
Sbjct: 7   GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCS 66

Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
              D+    +++K  I  +   +L+NN G+ Y    F  +  Q  ++   +VNV      
Sbjct: 67  NREDIYSSAKKVKAEIGDVS--ILVNNAGVVYTSDLFATQDPQ--IEKTFEVNVLAHFWT 122

Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE---YRKS 229
           T+A LP M K   G IV + S A  V  S P    Y ++K     F ++L  E    + +
Sbjct: 123 TKAFLPAMTKNNHGHIVTVASAAGHV--SVPFLLAYCSSKFAAVGFHKTLTDELAALQIT 180

Query: 230 GIDVQC 235
           G+   C
Sbjct: 181 GVKTTC 186

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  117 bits (295), Expect = 1e-32
 Identities = 50/185 (27%), Positives = 91/185 (49%), Gaps = 9/185 (4%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAK-YAKTQIKSVVVDFS 114
           A++TG ++GIG++ A   A+ G  + + GR+ ++L++    I A   ++  + SVV D +
Sbjct: 8   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 67

Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYAR--FFHEVDQVLLKNLIKVNVEGTT 170
                DE +         LD  +L+NN G + P ++               + +N+    
Sbjct: 68  TDAGQDEILSTTLGKFGKLD--ILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVI 125

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
            +T+  +P  L   KG IVNI S A+ +  + P +  Y+  KA IDQ++R+  ++  + G
Sbjct: 126 ALTKKAVP-HLSSTKGEIVNISSIASGLHAT-PDFPYYSIAKAAIDQYTRNTAIDLIQHG 183

Query: 231 IDVQC 235
           I V  
Sbjct: 184 IRVNS 188

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  111 bits (278), Expect = 4e-30
 Identities = 46/185 (24%), Positives = 92/185 (49%), Gaps = 9/185 (4%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI-QAKYAKTQIKSVVVDFS 114
            ++TG ++GIG++ A   A+ G N+ + GR+ ++L++    I ++  ++ Q+ SVV D +
Sbjct: 8   VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT 67

Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYP--YARFFHEVDQVLLKNLIKVNVEGTT 170
                D+ +    +    +D  VL+NN G + P  +     +    +    +K+N++   
Sbjct: 68  TEDGQDQIINSTLKQFGKID--VLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVI 125

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
           ++T+ V P ++  K   +      A     + P +  YA  KA +DQ++RS  ++  K G
Sbjct: 126 EMTKKVKPHLVASKGEIVNVSSIVAGPQ--AQPDFLYYAIAKAALDQYTRSTAIDLAKFG 183

Query: 231 IDVQC 235
           I V  
Sbjct: 184 IRVNS 188

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  109 bits (274), Expect = 1e-29
 Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 16/182 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            LVTG   GIG++ A   A+ G  + L    P+  K+V+++I   +         VD   
Sbjct: 8   VLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGGAF-------FQVDLED 59

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
             +    VE    A+  +D  VL+NN  I+ P +     V     + +++VN+     ++
Sbjct: 60  ERERVRFVEEAAYALGRVD--VLVNNAAIAAPGS--ALTVRLPEWRRVLEVNLTAPMHLS 115

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
                 M K   GAIVN+ S   +   ++   + Y A+K  +   +RSL ++     I V
Sbjct: 116 ALAAREMRKVGGGAIVNVASVQGLF--AEQENAAYNASKGGLVNLTRSLALDLAPLRIRV 173

Query: 234 QC 235
             
Sbjct: 174 NA 175

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  109 bits (273), Expect = 2e-29
 Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 12/182 (6%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           A++TG  +GIG++ A + A  G ++ +    P    +       +    ++ +V  D S 
Sbjct: 8   AVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA----AIRNLGRRVLTVKCDVSQ 63

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
            GD++   +++       D  +L+NN GI       F E+     K   ++NV+    + 
Sbjct: 64  PGDVEAFGKQVISTFGRCD--ILVNNAGIYPLIP--FDELTFEQWKKTFEINVDSGFLMA 119

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           +A +PGM +   G I+N+ S    +      Y+ Y +TKA    F+R+L  +  K GI V
Sbjct: 120 KAFVPGMKRNGWGRIINLTSTTYWL--KIEAYTHYISTKAANIGFTRALASDLGKDGITV 177

Query: 234 QC 235
             
Sbjct: 178 NA 179

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  109 bits (274), Expect = 3e-29
 Identities = 45/186 (24%), Positives = 82/186 (44%), Gaps = 12/186 (6%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKS---VVVD 112
            LVTG   G+G+++A   A+ G  +V+     D       S  A     +I+      V 
Sbjct: 10  VLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVA 69

Query: 113 FSGDLDEGVERIKEAIE---GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
               ++ G + +K A++    +D  V++NN GI     R F  +       + +V++ G+
Sbjct: 70  NYDSVEAGEKLVKTALDTFGRID--VVVNNAGILRD--RSFSRISDEDWDIIQRVHLRGS 125

Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
            +VT+A    M K+  G I+   S + I    +   + Y+A K  +   + +L +E RK+
Sbjct: 126 FQVTRAAWDHMKKQNYGRIIMTASASGIY--GNFGQANYSAAKLGLLGLANTLVIEGRKN 183

Query: 230 GIDVQC 235
            I    
Sbjct: 184 NIHCNT 189

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  107 bits (268), Expect = 1e-28
 Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 4/182 (2%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A++TG   GIG++ A    + G  +V+     D  + V ++I +    + +   V     
Sbjct: 9   AIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDE- 67

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
           D+   V+        LD  ++  NVG+         E      K ++ +NV G   V + 
Sbjct: 68  DVRNLVDTTIAKHGKLD--IMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKH 125

Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
               M+  KKG+IV   S ++     + +  VY ATK  +   + SL  E  + GI V C
Sbjct: 126 AARVMIPAKKGSIVFTASISS-FTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNC 184

Query: 236 QV 237
             
Sbjct: 185 VS 186

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  105 bits (264), Expect = 4e-28
 Identities = 41/183 (22%), Positives = 78/183 (42%), Gaps = 10/183 (5%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A++TG T GIG + A +  + G  +++ GR+ D  +  + S+         +    D   
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDED- 67

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
              +  +  ++A   +    L+NN GI+    +   E      + L+ VN++G    T+ 
Sbjct: 68  GWTKLFDATEKAFGPVS--TLVNNAGIAVN--KSVEETTTAEWRKLLAVNLDGVFFGTRL 123

Query: 176 VLPGMLKRKKGA-IVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEY--RKSGID 232
            +  M  +  GA I+N+ S    V   DP    Y A+K  +   S+S  ++   +   + 
Sbjct: 124 GIQRMKNKGLGASIINMSSIEGFV--GDPSLGAYNASKGAVRIMSKSAALDCALKDYDVR 181

Query: 233 VQC 235
           V  
Sbjct: 182 VNT 184

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  105 bits (263), Expect = 5e-28
 Identities = 42/182 (23%), Positives = 73/182 (40%), Gaps = 13/182 (7%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            ++TG   G+G   A Q    G  +VL     ++    +  +         +   +D + 
Sbjct: 8   VIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDA-----ARYQHLDVTI 62

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
             D    V   +E    +D   L+NN GIS         V++   + ++++N+ G     
Sbjct: 63  EEDWQRVVAYAREEFGSVD--GLVNNAGISTGMFLETESVERF--RKVVEINLTGVFIGM 118

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           + V+P M     G+IVNI S A ++  +    S Y A+K  +   S+   VE     I V
Sbjct: 119 KTVIPAMKDAGGGSIVNISSAAGLMGLAL--TSSYGASKWGVRGLSKLAAVELGTDRIRV 176

Query: 234 QC 235
             
Sbjct: 177 NS 178

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (261), Expect = 7e-28
 Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 15/181 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            LVTG   GIG+     L  TG  +V V R    L  +            I+ V VD   
Sbjct: 10  VLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG------IEPVCVDLGD 63

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
              E  ER   ++  +D  +L+NN  ++    + F EV +       +VN+    +V+Q 
Sbjct: 64  --WEATERALGSVGPVD--LLVNNAAVALL--QPFLEVTKEAFDRSFEVNLRAVIQVSQI 117

Query: 176 VLPGMLKRKKG-AIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQ 234
           V  G++ R    AIVN+ S  +        +SVY +TK  +D  ++ + +E     I V 
Sbjct: 118 VARGLIARGVPGAIVNVSSQCSQRAV--TNHSVYCSTKGALDMLTKVMALELGPHKIRVN 175

Query: 235 C 235
            
Sbjct: 176 A 176

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (259), Expect = 2e-27
 Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 6/186 (3%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G   +VTG + GIG+  A+ LAK G ++V+  R+ + L+ V        A +     +  
Sbjct: 14  GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAH--YIAG 71

Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
              D+    + + +A + +    ++    I+          D   ++  ++VN      +
Sbjct: 72  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLN-LFHDDIHHVRKSMEVNFLSYVVL 130

Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
           T A LP MLK+  G+IV + S A  V  + P+ + Y+A+K  +D F  S+  EY  S ++
Sbjct: 131 TVAALP-MLKQSNGSIVVVSSLAGKV--AYPMVAAYSASKFALDGFFSSIRKEYSVSRVN 187

Query: 233 VQCQVL 238
           V   + 
Sbjct: 188 VSITLC 193

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  103 bits (257), Expect = 4e-27
 Identities = 41/180 (22%), Positives = 73/180 (40%), Gaps = 6/180 (3%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVTG   GIG+  A  LAK+  +++ + R       V D I++     +      D S 
Sbjct: 13  ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKS--FGYESSGYAGDVSK 70

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
              E +  +   I      V I            F  +     +++++ N+     +TQ 
Sbjct: 71  --KEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQP 128

Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
           +   M+  + G I+NI S   +    +   + Y+++KA +  F++SL  E     I V  
Sbjct: 129 ISKRMINNRYGRIINISSIVGLT--GNVGQANYSSSKAGVIGFTKSLAKELASRNITVNA 186

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  102 bits (256), Expect = 5e-27
 Identities = 51/184 (27%), Positives = 79/184 (42%), Gaps = 15/184 (8%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG   GIG+     L  +G  +V V R    L  ++           I+ V VD
Sbjct: 5   GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG------IEPVCVD 58

Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
              D D   E+    I  +D  +L+NN  +     + F EV +        VN+    +V
Sbjct: 59  LG-DWDA-TEKALGGIGPVD--LLVNNAALVIM--QPFLEVTKEAFDRSFSVNLRSVFQV 112

Query: 173 TQAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           +Q V   M+ R   G+IVN+ S  A V  + P    Y++TK  +   ++++ +E     I
Sbjct: 113 SQMVARDMINRGVPGSIVNVSSMVAHV--TFPNLITYSSTKGAMTMLTKAMAMELGPHKI 170

Query: 232 DVQC 235
            V  
Sbjct: 171 RVNS 174

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  103 bits (257), Expect = 5e-27
 Identities = 45/186 (24%), Positives = 80/186 (43%), Gaps = 7/186 (3%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAK-TQIKSVVV 111
           G   ++TG ++GIG+S A   AK G  + + GRN D+L++    I        +I +VV 
Sbjct: 4   GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVA 63

Query: 112 DFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
           D +     D+ +         +D  +L+NN G +        +    L +   K+N +  
Sbjct: 64  DVTEASGQDDIINTTLAKFGKID--ILVNNAGANLADGTANTDQPVELYQKTFKLNFQAV 121

Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
            ++TQ     ++K K   +      A         Y  YA  KA +DQ++R   ++  + 
Sbjct: 122 IEMTQKTKEHLIKTKGEIVNVSSIVAGPQAH--SGYPYYACAKAALDQYTRCTAIDLIQH 179

Query: 230 GIDVQC 235
           G+ V  
Sbjct: 180 GVRVNS 185

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (254), Expect = 7e-27
 Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 14/180 (7%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            ++T    GIG++ A   A+ G  ++    N  KL+++      +               
Sbjct: 9   IILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVL----------- 57

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
           D+ +  +  + A E   + VL N  G  +       + ++      + +NV     + +A
Sbjct: 58  DVTKKKQIDQFANEVERLDVLFNVAGFVHH--GTVLDCEEKDWDFSMNLNVRSMYLMIKA 115

Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
            LP ML +K G I+N+ S A+ V        VY+ TKA +   ++S+  ++ + GI   C
Sbjct: 116 FLPKMLAQKSGNIINMSSVASSVKGVVN-RCVYSTTKAAVIGLTKSVAADFIQQGIRCNC 174

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (255), Expect = 7e-27
 Identities = 44/190 (23%), Positives = 77/190 (40%), Gaps = 21/190 (11%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG   GIG++FA  L   G  + LV  N +       ++  ++   +   +  D
Sbjct: 3   GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCD 62

Query: 113 FS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
            +    L +   ++ +    LD  +L+NN G++                  +++N+    
Sbjct: 63  VADQQQLRDTFRKVVDHFGRLD--ILVNNAGVNNEKNWEKT----------LQINLVSVI 110

Query: 171 KVTQAVLPGMLKRKK---GAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSR--SLYVE 225
             T   L  M K+     G I+N+ S A ++        VY A+K  I  F+R  +L   
Sbjct: 111 SGTYLGLDYMSKQNGGEGGIIINMSSLAGLM--PVAQQPVYCASKHGIVGFTRSAALAAN 168

Query: 226 YRKSGIDVQC 235
              SG+ +  
Sbjct: 169 LMNSGVRLNA 178

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (255), Expect = 7e-27
 Identities = 36/182 (19%), Positives = 73/182 (40%), Gaps = 14/182 (7%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            +VTG   GIG         +G  +V+  ++    + +   +           ++ D + 
Sbjct: 9   VVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVF------ILCDVTQ 62

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
             D+   V         LD  V   N    +P  +   E      + L+++N+ GT  +T
Sbjct: 63  EDDVKTLVSETIRRFGRLDCVV---NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLT 119

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           +  LP + ++ +G ++NI S    +  +      Y ATK  +   +++L ++    G+ V
Sbjct: 120 KLALPYL-RKSQGNVINISSLVGAIGQAQ--AVPYVATKGAVTAMTKALALDESPYGVRV 176

Query: 234 QC 235
            C
Sbjct: 177 NC 178

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  101 bits (253), Expect = 2e-26
 Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 5/183 (2%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG + GIG     +LA  G ++    RN  +L D     ++K  K +     + 
Sbjct: 8   GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLS 67

Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
              +  E +  +     G  + +L+NN GI     +   +        ++ +N E    +
Sbjct: 68  SRSERQELMNTVANHFHG-KLNILVNNAGIVIY--KEAKDYTVEDYSLIMSINFEAAYHL 124

Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
           +    P +   ++G +V I S +  +  + P  +VY ATK  +DQ +R L  E+ K  I 
Sbjct: 125 SVLAHPFLKASERGNVVFISSVSGAL--AVPYEAVYGATKGAMDQLTRCLAFEWAKDNIR 182

Query: 233 VQC 235
           V  
Sbjct: 183 VNG 185

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  100 bits (249), Expect = 4e-26
 Identities = 42/184 (22%), Positives = 73/184 (39%), Gaps = 17/184 (9%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            +      GIG   + +L K  L   ++    +    +++ ++A   K  I     D + 
Sbjct: 8   VIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAE-LKAINPKVNITFHTYDVTV 66

Query: 116 DLDEGVERIKEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
            + E  + +K+  + L  V +LIN  GI        H++++      I +N  G    T 
Sbjct: 67  PVAESKKLLKKIFDQLKTVDILINGAGILDD-----HQIERT-----IAINFTGLVNTTT 116

Query: 175 AVLPGMLKR---KKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           A+L    KR     G I NI S       +     VY+A+KA +  F+ SL      +G+
Sbjct: 117 AILDFWDKRKGGPGGIIANICSVTGFN--AIHQVPVYSASKAAVVSFTNSLAKLAPITGV 174

Query: 232 DVQC 235
               
Sbjct: 175 TAYS 178

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 99.8 bits (248), Expect = 5e-26
 Identities = 49/183 (26%), Positives = 89/183 (48%), Gaps = 9/183 (4%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  ALVTG + GIG++ A  LA  G  ++    + +  + +SD + A       K ++++
Sbjct: 4   GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANG-----KGLMLN 58

Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
            +          K   E  +V +L+NN GI+        + ++    ++I+ N+    ++
Sbjct: 59  VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEW--NDIIETNLSSVFRL 116

Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
           ++AV+  M+K++ G I+ IGS    +   +   + YAA KA +  FS+SL  E    GI 
Sbjct: 117 SKAVMRAMMKKRHGRIITIGSVVGTM--GNGGQANYAAAKAGLIGFSKSLAREVASRGIT 174

Query: 233 VQC 235
           V  
Sbjct: 175 VNV 177

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =   99 bits (248), Expect = 6e-26
 Identities = 38/200 (19%), Positives = 76/200 (38%), Gaps = 26/200 (13%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF 113
            +VTG   GIG     QL K     +++   R+ +K  ++     ++     +  + +  
Sbjct: 6   VVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSR-----VHVLPLTV 60

Query: 114 S--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
           +    LD  V ++ E +    + +LINN G+   Y     E ++ ++   + VN      
Sbjct: 61  TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYG-TNTEPNRAVIAEQLDVNTTSVVL 119

Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIP----------------SDPLYSVYAATKAYI 215
           +TQ +LP +         +  S +   +                 +      Y  +KA I
Sbjct: 120 LTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAI 179

Query: 216 DQFSRSLYVEYRKSGIDVQC 235
           + F R+L V+ +   + V  
Sbjct: 180 NMFGRTLAVDLKDDNVLVVN 199

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 97.9 bits (243), Expect = 3e-25
 Identities = 43/187 (22%), Positives = 75/187 (40%), Gaps = 13/187 (6%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLN-------LVLVGRNPDKLKDVSDSIQAKYAKTQIKS 108
            L+TG   GIG++ A + A+   +       LVL  R    L+ +S   +A+ A T   +
Sbjct: 4   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 63

Query: 109 VVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
             +    D+      I E    +D    +NN G+    A      +       +  N++G
Sbjct: 64  ADISDMADVRRLTTHIVERYGHIDCL--VNNAGVGRFGALSDLTEEDF--DYTMNTNLKG 119

Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
           T  +TQA+   M ++  G I  I S AA    +    S+Y  +K        ++ +  RK
Sbjct: 120 TFFLTQALFALMERQHSGHIFFITSVAATK--AFRHSSIYCMSKFGQRGLVETMRLYARK 177

Query: 229 SGIDVQC 235
             + +  
Sbjct: 178 CNVRITD 184

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 97.9 bits (243), Expect = 3e-25
 Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 7/181 (3%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
            +VTG + GIGK+ A  L K G  +++   R+    ++VS  I+A   +       V   
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKE 63

Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
            D++  ++   +A   +D    +               + +     +I +N+ G    TQ
Sbjct: 64  ADVEAMMKTAIDAWGTID----VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQ 119

Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQ 234
           A    M+K++KG I+NI S   ++   +   + YAA KA +  FS++   E     I+V 
Sbjct: 120 AATKIMMKKRKGRIINIASVVGLI--GNIGQANYAAAKAGVIGFSKTAAREGASRNINVN 177

Query: 235 C 235
            
Sbjct: 178 V 178

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 97.8 bits (243), Expect = 4e-25
 Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 5/180 (2%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            LVTG T GIG +   + A  G  +    RN  +L +     Q K  +            
Sbjct: 11  VLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRP 70

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
           + ++ ++ +     G  + +LINN+G          +         I  N+E    ++Q 
Sbjct: 71  EREKLMQTVSSMFGG-KLDILINNLGAIRSKP--TLDYTAEDFSFHISTNLESAYHLSQL 127

Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
             P +     G I+ + S A +V  S    S+Y+ATK  ++Q +R+L  E+   GI    
Sbjct: 128 AHPLLKASGCGNIIFMSSIAGVVSASV--GSIYSATKGALNQLARNLACEWASDGIRANA 185

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 97.5 bits (242), Expect = 7e-25
 Identities = 39/190 (20%), Positives = 78/190 (41%), Gaps = 13/190 (6%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            +VTG   GIG +F   +A  G N+ ++ R+     +V++ +  ++   + K+   D S 
Sbjct: 12  IIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSN 70

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              + + +++I   +  +    LI N G+S        E+       +  VNV G     
Sbjct: 71  TDIVTKTIQQIDADLGPIS--GLIANAGVSVVKP--ATELTHEDFAFVYDVNVFGVFNTC 126

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSD------PLYSVYAATKAYIDQFSRSLYVEYR 227
           +AV    L++++   + + S  +  I +            Y ++KA      + L  E+ 
Sbjct: 127 RAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWA 186

Query: 228 KSGIDVQCQV 237
            +GI V    
Sbjct: 187 SAGIRVNALS 196

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 97.0 bits (241), Expect = 9e-25
 Identities = 42/185 (22%), Positives = 74/185 (40%), Gaps = 14/185 (7%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           ALVTG   G+G      L   G  +     N    + ++  +  +        V  D S 
Sbjct: 9   ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGER-----SMFVRHDVSS 63

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
             D    +  ++  +  L+  VL+NN GI  P               L+K+N E      
Sbjct: 64  EADWTLVMAAVQRRLGTLN--VLVNNAGILLP--GDMETGRLEDFSRLLKINTESVFIGC 119

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           Q  +  M K   G+I+N+ S ++ +      Y+ Y+A+KA +   +R+  +  RK G  +
Sbjct: 120 QQGIAAM-KETGGSIINMASVSSWL--PIEQYAGYSASKAAVSALTRAAALSCRKQGYAI 176

Query: 234 QCQVL 238
           +   +
Sbjct: 177 RVNSI 181

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 97.0 bits (241), Expect = 1e-24
 Identities = 32/186 (17%), Positives = 63/186 (33%), Gaps = 16/186 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            L+TG   G+G++   +    G  + ++ ++ ++L ++            +  +V D   
Sbjct: 8   VLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAEL-----ETDHGDNVLGIVGDVRS 62

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLL---KNLIKVNVEGTT 170
             D  +   R       +D  +   N GI           ++ L      +  +NV+G  
Sbjct: 63  LEDQKQAASRCVARFGKIDTLI--PNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYI 120

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
              +A LP ++  +   I  I +             +Y A K  I    R L  E     
Sbjct: 121 HAVKACLPALVASRGNVIFTISNAGFYPNGG---GPLYTAAKHAIVGLVRELAFELAP-Y 176

Query: 231 IDVQCQ 236
           + V   
Sbjct: 177 VRVNGV 182

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.1 bits (238), Expect = 3e-24
 Identities = 38/178 (21%), Positives = 74/178 (41%), Gaps = 9/178 (5%)

Query: 56  ALVTGPTDGIGKSFAFQLAK-TGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           ALVTG   GIG +    L +    ++VL  R+  + +     +QA+    +   + +D  
Sbjct: 6   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL 65

Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
             +    + +++   GLD  VL+NN GI++           +  +  +K N  GT  V  
Sbjct: 66  QSIRALRDFLRKEYGGLD--VLVNNAGIAFK--VADPTPFHIQAEVTMKTNFFGTRDVCT 121

Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
            +LP +  + +G +VN+ S  ++   +    S     K   +  +    V      ++
Sbjct: 122 ELLPLI--KPQGRVVNVSSIMSVR--ALKSCSPELQQKFRSETITEEELVGLMNKFVE 175

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 94.8 bits (235), Expect = 6e-24
 Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 4/180 (2%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVTG T GIG   A +L K GL + +  R  + L+     ++    +   ++  V    
Sbjct: 5   ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP 64

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
           +++  V  + E    +DV V  NN G     A    E+   L  ++++ N+ G  +VT+ 
Sbjct: 65  EIEALVAAVVERYGPVDVLV--NNAGRPGGGA--TAELADELWLDVVETNLTGVFRVTKQ 120

Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
           VL      ++G    +   +          + Y+A+K  +  F+++L +E  ++GI V  
Sbjct: 121 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 180

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.3 bits (236), Expect = 6e-24
 Identities = 39/180 (21%), Positives = 66/180 (36%), Gaps = 2/180 (1%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            L+TG + GIG   A +LA        V      LK      +A  A       +     
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
           D+ +            +  V +               + +  + +++ VNV GT ++ QA
Sbjct: 65  DVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQA 124

Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
            LP M +R  G ++  GS   ++    P   VY A+K  ++    SL V     G+ +  
Sbjct: 125 FLPDMKRRGSGRVLVTGSVGGLM--GLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSL 182

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 94.1 bits (233), Expect = 1e-23
 Identities = 35/191 (18%), Positives = 73/191 (38%), Gaps = 10/191 (5%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKT---GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSV 109
            +  ++TG + G G++ A QLA+    G  +++  R+   L+ + + + A+    ++   
Sbjct: 6   CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLA 65

Query: 110 VVDFS--GDLDEGVERIKE--AIEGLDVGVLINNVGISYPYAR-FFHEVDQVLLKNLIKV 164
             D      +   +  ++E    EGL   +LINN       ++ F +  D   + N   +
Sbjct: 66  AADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWAL 125

Query: 165 NVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYV 224
           N+     +T   L         +   +   +   +     + +Y A KA  D   + L  
Sbjct: 126 NLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAA 185

Query: 225 EYRKSGIDVQC 235
           E     + V  
Sbjct: 186 EEP--SVRVLS 194

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.4 bits (234), Expect = 2e-23
 Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 10/187 (5%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           G  A+VTG   GIGK+   +L + G N+V+  R  ++LK  +D +QA    T+ ++ V+ 
Sbjct: 12  GQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTK-QARVIP 70

Query: 113 FSGDL--DEGVERIKEAI--EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEG 168
              ++  +E V  + ++       +  L+NN G  +        +       +++ N+ G
Sbjct: 71  IQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFL--SPAEHISSKGWHAVLETNLTG 128

Query: 169 TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
           T  + +AV    +K   G+IVNI           PL     A +A +   ++SL +E+  
Sbjct: 129 TFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF---PLAVHSGAARAGVYNLTKSLALEWAC 185

Query: 229 SGIDVQC 235
           SGI + C
Sbjct: 186 SGIRINC 192

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 92.5 bits (229), Expect = 4e-23
 Identities = 44/182 (24%), Positives = 73/182 (40%), Gaps = 7/182 (3%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            L+TG   G+G++ A +LA  G  L LV  + + L+    ++       ++ + V D S 
Sbjct: 7   VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD 66

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              ++  V    E    +D     NN GI                  ++ +N+ G     
Sbjct: 67  EAQVEAYVTATTERFGRID--GFFNNAGIEG-KQNPTESFTAAEFDKVVSINLRGVFLGL 123

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           + VL  M ++  G +VN  S   I        S YAA K  +   +R+  VEY + GI +
Sbjct: 124 EKVLKIMREQGSGMVVNTASVGGIR--GIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRI 181

Query: 234 QC 235
             
Sbjct: 182 NA 183

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 91.2 bits (226), Expect = 9e-23
 Identities = 42/182 (23%), Positives = 81/182 (44%), Gaps = 16/182 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            L+TG   GIG++     AK G  LV        L++ ++++ A         VV+D + 
Sbjct: 8   VLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHP-------VVMDVAD 60

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              ++ G       +  LD   +++  GI+     F  ++     + +++VN+ G+  V 
Sbjct: 61  PASVERGFAEALAHLGRLD--GVVHYAGITRD--NFHWKMPLEDWELVLRVNLTGSFLVA 116

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           +A    M ++  G+IV   S   +    +   + YAA+ A +   +R+L +E  + GI V
Sbjct: 117 KAASEAMREKNPGSIVLTASRVYL---GNLGQANYAASMAGVVGLTRTLALELGRWGIRV 173

Query: 234 QC 235
             
Sbjct: 174 NT 175

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 87.8 bits (217), Expect = 2e-21
 Identities = 47/182 (25%), Positives = 87/182 (47%), Gaps = 8/182 (4%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           ALVTG + G+G   A  LA+ G ++V+  RN ++  + +  +  KY   +  +   D S 
Sbjct: 8   ALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSN 66

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
             ++ + +E +KE    LD   ++N  GI+  +     E      + +I+VN+ GT  V 
Sbjct: 67  YEEVKKLLEAVKEKFGKLD--TVVNAAGINRRHP--AEEFPLDEFRQVIEVNLFGTYYVC 122

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           +     + +    +I+NI     +   + P  S YAA+K  +   +++L  E+ + GI V
Sbjct: 123 REAFSLLRESDNPSIINI-GSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRV 181

Query: 234 QC 235
             
Sbjct: 182 NV 183

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 87.5 bits (216), Expect = 3e-21
 Identities = 41/182 (22%), Positives = 74/182 (40%), Gaps = 9/182 (4%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            LVTG    IG + A +LA+ G  + L+  N + L+    S++ K  +   +S V D + 
Sbjct: 8   CLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVE--ARSYVCDVTS 65

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              +   V+ +      +D          ++   + +   D      ++ +NV G   V 
Sbjct: 66  EEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDD---FARVLTINVTGAFHVL 122

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           +AV   M+ +  G IVN  S A +  P  P  + Y  +K  I   + +  ++     I V
Sbjct: 123 KAVSRQMITQNYGRIVNTASMAGVKGP--PNMAAYGTSKGAIIALTETAALDLAPYNIRV 180

Query: 234 QC 235
             
Sbjct: 181 NA 182

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 86.1 bits (212), Expect = 9e-21
 Identities = 40/183 (21%), Positives = 69/183 (37%), Gaps = 7/183 (3%)

Query: 56  ALVTGPTD--GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF 113
           ALV G T+   +G + A +L + G  + L  +      +     +A       ++ V   
Sbjct: 11  ALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQD 70

Query: 114 SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
             +LD     +KEA  GLD  V              + +  +      ++V+      V 
Sbjct: 71  E-ELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVA 129

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           +   P +  R+ G IV +   A+  +   P Y+V A  KA ++   R L  E    G+ V
Sbjct: 130 RRAEPLL--REGGGIVTLTYYASEKVV--PKYNVMAIAKAALEASVRYLAYELGPKGVRV 185

Query: 234 QCQ 236
              
Sbjct: 186 NAI 188

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 85.9 bits (212), Expect = 1e-20
 Identities = 41/180 (22%), Positives = 79/180 (43%), Gaps = 5/180 (2%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           ALVTG + GIG +   +LA  G  +    RN  +L +  +  + K    +     +    
Sbjct: 9   ALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRT 68

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
           + D+ ++ +    +G    +L+NN G+         +  +     ++  N E    ++Q 
Sbjct: 69  ERDKLMQTVAHVFDGKL-NILVNNAGVVIHKE--AKDFTEKDYNIIMGTNFEAAYHLSQI 125

Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
             P +   + G ++ + S A     + P  S+Y+A+K  I+Q ++SL  E+ K  I V  
Sbjct: 126 AYPLLKASQNGNVIFLSSIAGFS--ALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNS 183

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 85.2 bits (210), Expect = 2e-20
 Identities = 46/186 (24%), Positives = 84/186 (45%), Gaps = 12/186 (6%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVV 111
           G  AL TG   GIG+  A +L + G ++V+  G +    ++V   ++   A+    ++  
Sbjct: 6   GKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQ--GVAIQA 63

Query: 112 DFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
           D S   ++    ++      GLD   +++N G+         EV Q L   +  +N  G 
Sbjct: 64  DISKPSEVVALFDKAVSHFGGLD--FVMSNSGMEVW--CDELEVTQELFDKVFNLNTRGQ 119

Query: 170 TKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
             V Q  L      ++G  + + S  A V+   P +++YA +KA ++ F R+  V+    
Sbjct: 120 FFVAQQGLKHC---RRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAK 176

Query: 230 GIDVQC 235
           G+ V C
Sbjct: 177 GVTVNC 182

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 82.9 bits (204), Expect = 2e-19
 Identities = 36/184 (19%), Positives = 73/184 (39%), Gaps = 8/184 (4%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVV 111
           G  ALVTG   GIG+  A +L + G  +++   N  +  ++V  +I+   +        V
Sbjct: 18  GKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANV 77

Query: 112 DFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTK 171
               D+    E   +    LD  ++ +N G+         +V       +  +N  G   
Sbjct: 78  GVVEDIVRMFEEAVKIFGKLD--IVCSNSGVVSFGH--VKDVTPEEFDRVFTINTRGQFF 133

Query: 172 VTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           V +     +    +  ++   +G      + P ++VY+ +K  I+ F+R + ++     I
Sbjct: 134 VAREAYKHLEIGGRLILMGSITG---QAKAVPKHAVYSGSKGAIETFARCMAIDMADKKI 190

Query: 232 DVQC 235
            V  
Sbjct: 191 TVNV 194

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 80.9 bits (199), Expect = 6e-19
 Identities = 43/182 (23%), Positives = 73/182 (40%), Gaps = 13/182 (7%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           ALV+G   G+G S    +   G  +V      ++ K ++  +         + V +D + 
Sbjct: 9   ALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADA-----ARYVHLDVTQ 63

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
                  V+    A  GL   VL+NN GI         +      + ++ VN+ G     
Sbjct: 64  PAQWKAAVDTAVTAFGGLH--VLVNNAGILNI--GTIEDYALTEWQRILDVNLTGVFLGI 119

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           +AV+  M +  +G+I+NI S     +        Y ATK  +   ++S  +E   SGI V
Sbjct: 120 RAVVKPMKEAGRGSIINISSI--EGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRV 177

Query: 234 QC 235
             
Sbjct: 178 NS 179

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 79.7 bits (196), Expect = 2e-18
 Identities = 33/180 (18%), Positives = 66/180 (36%), Gaps = 11/180 (6%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A+VT      G   A +L++ G  +     +  +  ++       +A+T  +   +    
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL-----EAFAETYPQLKPMSEQ- 56

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
           +  E +E +  A   +D  VL++N   +  +     +      +  ++        +  A
Sbjct: 57  EPAELIEAVTSAYGQVD--VLVSNDIFAPEFQP-IDKYAVEDYRGAVEALQIRPFALVNA 113

Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
           V   M KRK G I+ I S        +   S Y + +A     + +L  E  +  I V  
Sbjct: 114 VASQMKKRKSGHIIFITSATPFGPWKE--LSTYTSARAGACTLANALSKELGEYNIPVFA 171

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 79.8 bits (196), Expect = 2e-18
 Identities = 39/182 (21%), Positives = 71/182 (39%), Gaps = 12/182 (6%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           AL+TG   GIG++FA    + G  + +   N +  +  +  I          ++ +D + 
Sbjct: 8   ALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPA-----ACAIALDVTD 62

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              +D  V  + +    +D+ V                E+ +     L  +NV GT  + 
Sbjct: 63  QASIDRCVAELLDRWGSIDILVNNAA----LFDLAPIVEITRESYDRLFAINVSGTLFMM 118

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           QAV   M+   +G  +   +  A          VY ATKA +   ++S  +   + GI+V
Sbjct: 119 QAVARAMIAGGRGGKIINMASQAGRRGEAL-VGVYCATKAAVISLTQSAGLNLIRHGINV 177

Query: 234 QC 235
             
Sbjct: 178 NA 179

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.6 bits (190), Expect = 1e-17
 Identities = 32/186 (17%), Positives = 62/186 (33%), Gaps = 9/186 (4%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A++TG   G+G + A +L   G + VL+       +  +  +                  
Sbjct: 8   AVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQ 67

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
                 +     ++       I     +Y   +      +   +  + VN+ GT  V + 
Sbjct: 68  TALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRV-LDVNLMGTFNVIRL 126

Query: 176 VLPGMLKR------KKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKS 229
           V   M +       ++G I+N  S AA         + Y+A+K  I   +  +  +    
Sbjct: 127 VAGEMGQNEPDQGGQRGVIINTASVAAFE--GQVGQAAYSASKGGIVGMTLPIARDLAPI 184

Query: 230 GIDVQC 235
           GI V  
Sbjct: 185 GIRVMT 190

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 77.0 bits (189), Expect = 1e-17
 Identities = 48/183 (26%), Positives = 72/183 (39%), Gaps = 21/183 (11%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
               LV   + GIG++ A  L++ G  + +  RN + LK               + VV D
Sbjct: 4   DKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGH-----------RYVVCD 52

Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
              DLD   E++KE      V +L+ N     P A FF E+     K  I        K+
Sbjct: 53  LRKDLDLLFEKVKE------VDILVLN--AGGPKAGFFDELTNEDFKEAIDSLFLNMIKI 104

Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
            +  LP M ++  G IV I S + I            + +  +  F ++L  E    GI 
Sbjct: 105 VRNYLPAMKEKGWGRIVAITSFSVISPI--ENLYTSNSARMALTGFLKTLSFEVAPYGIT 162

Query: 233 VQC 235
           V C
Sbjct: 163 VNC 165

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 77.1 bits (189), Expect = 3e-17
 Identities = 36/180 (20%), Positives = 70/180 (38%), Gaps = 4/180 (2%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           A +TG   G+GK     L+  G   V+  R  D LK  ++ I ++    ++ ++  D   
Sbjct: 28  AFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRD 86

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
              + V+     +  +     I     +  +      +     K +  + + GT  VT  
Sbjct: 87  --PDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLE 144

Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
           +   ++K +KGA     +       S  +    A+ KA ++  S+SL  E+ K G+    
Sbjct: 145 IGKQLIKAQKGAAFLSITTIYAETGSGFVV-PSASAKAGVEAMSKSLAAEWGKYGMRFNV 203

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 76.4 bits (187), Expect = 3e-17
 Identities = 46/182 (25%), Positives = 73/182 (40%), Gaps = 9/182 (4%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
           ALVTG   GIGK+ A +L K G  + +   N    K V+  I          +V VD S 
Sbjct: 4   ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGH--AVAVKVDVSD 61

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              +   VE+ ++ + G DV V    V  S P      E+       +  +NV+G     
Sbjct: 62  RDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVD----KVYNINVKGVIWGI 117

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           QA +    K   G  +      A     +P  +VY+++K  +   +++   +    GI V
Sbjct: 118 QAAVEAFKKEGHGGKIINACSQA-GHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITV 176

Query: 234 QC 235
             
Sbjct: 177 NG 178

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 76.1 bits (186), Expect = 5e-17
 Identities = 34/198 (17%), Positives = 65/198 (32%), Gaps = 20/198 (10%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL-KDVSDSIQAKYAKTQIK-----SV 109
           A++TG    IG S A +L + G  +V+  R+ +   + +   + A  A + +      S+
Sbjct: 4   AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL 63

Query: 110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYP---------YARFFHEVDQVLLKN 160
                   ++ ++    A    D  VL+NN    YP               +     +  
Sbjct: 64  SSSLLDCCEDIIDCSFRAFGRCD--VLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAE 121

Query: 161 LIKVNVEGTTKVTQAVLPGMLKRKKGAI---VNIGSGAAIVIPSDPLYSVYAATKAYIDQ 217
           L   N      + +A      +           +    A+     P + VY   K  +  
Sbjct: 122 LFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGG 181

Query: 218 FSRSLYVEYRKSGIDVQC 235
            +R+  +E     I V  
Sbjct: 182 LTRAAALELAPRHIRVNA 199

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 75.6 bits (185), Expect = 6e-17
 Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 10/183 (5%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAKYAKTQIKSVVVDFS 114
           A+VTG T GIG   A  LA  G ++VL G     +++ V   + A++   ++     D S
Sbjct: 7   AVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG-VKVLYDGADLS 65

Query: 115 --GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
               +   V+     +  +D+ V    +  +     F  E        ++ +N+      
Sbjct: 66  KGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWD----AILALNLSAVFHG 121

Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
           T A LP M K+  G I+NI S   +V  ++   S Y A K  +  F++   +E    GI 
Sbjct: 122 TAAALPHMKKQGFGRIINIASAHGLVASAN--KSAYVAAKHGVVGFTKVTALETAGQGIT 179

Query: 233 VQC 235
              
Sbjct: 180 ANA 182

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 75.2 bits (184), Expect = 8e-17
 Identities = 38/192 (19%), Positives = 64/192 (33%), Gaps = 33/192 (17%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK------DVSDSIQAKYAKTQIKSV 109
           ALVTG   G+G++ A  L   G  +V++    +         DV+     + A  + +  
Sbjct: 4   ALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIYVEGDVTREEDVRRAVARAQE- 62

Query: 110 VVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGT 169
                                L   V    VG++               + +++VN+ GT
Sbjct: 63  ------------------EAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGT 104

Query: 170 TKVTQAVLPG------MLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
             V +             + ++G IVN  S AA         + YAA+K  +   +    
Sbjct: 105 FNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE--GQIGQAAYAASKGGVVALTLPAA 162

Query: 224 VEYRKSGIDVQC 235
            E    GI V  
Sbjct: 163 RELAGWGIRVVT 174

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 75.2 bits (184), Expect = 1e-16
 Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 12/192 (6%)

Query: 47  KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAKYAKTQ 105
           K+L   G   ++TG + G+GKS A + A     +V+  R+  D+   V + I+    +  
Sbjct: 3   KDLE--GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGE-- 58

Query: 106 IKSVVVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIK 163
             +V  D +   D+   V+   +    LD  V+INN G+  P +   HE+       +I 
Sbjct: 59  AIAVKGDVTVESDVINLVQSAIKEFGKLD--VMINNAGLENPVS--SHEMSLSDWNKVID 114

Query: 164 VNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLY 223
            N+ G    ++  +   ++      V   S     IP  PL+  YAA+K  +   + +L 
Sbjct: 115 TNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW-PLFVHYAASKGGMKLMTETLA 173

Query: 224 VEYRKSGIDVQC 235
           +EY   GI V  
Sbjct: 174 LEYAPKGIRVNN 185

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 74.2 bits (181), Expect = 2e-16
 Identities = 31/186 (16%), Positives = 62/186 (33%), Gaps = 12/186 (6%)

Query: 56  ALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF 113
            LVTG      I    A  + + G  L    +N DKLK   +   A+     +    V  
Sbjct: 8   ILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVLQCDVAE 66

Query: 114 SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYA---RFFHEVDQVLLKNLIKVNVEGTT 170
              +D     + +     D    ++++G +        + + V +   K    ++     
Sbjct: 67  DASIDTMFAELGKVWPKFDG--FVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFV 124

Query: 171 KVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSG 230
            + +A    +      A++ +    A    + P Y+V    KA ++   R +       G
Sbjct: 125 AMAKACRSMLNPGS--ALLTLSYLGAER--AIPNYNVMGLAKASLEANVRYMANAMGPEG 180

Query: 231 IDVQCQ 236
           + V   
Sbjct: 181 VRVNAI 186

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 73.6 bits (179), Expect = 3e-16
 Identities = 39/196 (19%), Positives = 72/196 (36%), Gaps = 17/196 (8%)

Query: 56  ALVTGPTDGIGKSFA---FQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
            L+TG   G+G         L +   +L    RN ++ K++ D +   ++   I  + + 
Sbjct: 5   ILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKNHSNIHILEIDLR 63

Query: 113 FSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
                D+ V  I+   +   + VL NN GI+   AR    V    L + ++ N      +
Sbjct: 64  NFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITA-VRSQELLDTLQTNTVVPIML 122

Query: 173 TQAVLPGMLKRKKGAIVNIGSG------------AAIVIPSDPLYSVYAATKAYIDQFSR 220
            +A LP + K  K                      +I   +D     Y  +K+ ++  ++
Sbjct: 123 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATK 182

Query: 221 SLYVEYRKSGIDVQCQ 236
           SL V+     I     
Sbjct: 183 SLSVDLYPQRIMCVSL 198

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 73.5 bits (180), Expect = 3e-16
 Identities = 47/190 (24%), Positives = 77/190 (40%), Gaps = 11/190 (5%)

Query: 48  NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIK 107
           NLR  G  A++TG   GIGK  A   A  G ++V+   N D    V D IQ    +    
Sbjct: 6   NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ--AF 63

Query: 108 SVVVDFS--GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVN 165
           +   D +   +L    +     +  +D  +L+NN G   P      ++     +   ++N
Sbjct: 64  ACRCDITSEQELSALADFAISKLGKVD--ILVNNAGGGGPKP---FDMPMADFRRAYELN 118

Query: 166 VEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVE 225
           V     ++Q V P M K   G I+ I S        +   + YA++KA      R++  +
Sbjct: 119 VFSFFHLSQLVAPEMEKNGGGVILTITSM--AAENKNINMTSYASSKAAASHLVRNMAFD 176

Query: 226 YRKSGIDVQC 235
             +  I V  
Sbjct: 177 LGEKNIRVNG 186

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 73.4 bits (179), Expect = 3e-16
 Identities = 22/183 (12%), Positives = 56/183 (30%), Gaps = 15/183 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            +V G    +G +      K G  ++ +  + +   D +  +              +++ 
Sbjct: 5   VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGN----------KNWTE 54

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
                +E+   +++G  V  +       +       +        +IK +V  +    + 
Sbjct: 55  QEQSILEQTASSLQGSQVDGVFCVA-GGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKL 113

Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
                  +  G +   G+ AA+     P    Y   KA +   + SL  +      +   
Sbjct: 114 --ATTHLKPGGLLQLTGAAAAMG--PTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAV 169

Query: 236 QVL 238
             +
Sbjct: 170 LTI 172

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 70.6 bits (172), Expect = 3e-15
 Identities = 20/183 (10%), Positives = 51/183 (27%), Gaps = 15/183 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
            LV G    +G             +  +    ++    S  ++   + T+          
Sbjct: 5   VLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTE---------- 54

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
             D+    + + +    V  ++      +       +        + K ++  +T  +  
Sbjct: 55  QADQVTAEVGKLLGDQKVDAILCVA-GGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHL 113

Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
                  ++ G +   G+ AA  +   P    Y   K  + Q  +SL  +          
Sbjct: 114 A--TKHLKEGGLLTLAGAKAA--LDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAA 169

Query: 236 QVL 238
             +
Sbjct: 170 IAV 172

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 70.9 bits (173), Expect = 3e-15
 Identities = 38/182 (20%), Positives = 68/182 (37%), Gaps = 16/182 (8%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            LVTG   GIG++     A+ G +LV V R    L +   +++A+       +VV D S 
Sbjct: 8   ILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAE-----AIAVVADVSD 62

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              ++       E    L        V  S        E  +     +++VN+ G+  V 
Sbjct: 63  PKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWE----KVLRVNLTGSFLVA 118

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
           +     + +     +    +G           + YAA K  +   +R+L +E  + G+ V
Sbjct: 119 RKAGEVLEEGGSLVLTGSVAGL-----GAFGLAHYAAGKLGVVGLARTLALELARKGVRV 173

Query: 234 QC 235
             
Sbjct: 174 NV 175

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 69.4 bits (169), Expect = 8e-15
 Identities = 41/178 (23%), Positives = 70/178 (39%), Gaps = 21/178 (11%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS- 114
            LVTG   GIG + A +LA  G  + +  R     K +               V VD + 
Sbjct: 10  VLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL-------------FGVEVDVTD 56

Query: 115 -GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
              +D     ++E    ++V V             F   + +   + +I  N+ G  +V 
Sbjct: 57  SDAVDRAFTAVEEHQGPVEVLVSNAG----LSADAFLMRMTEEKFEKVINANLTGAFRVA 112

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGI 231
           Q     M + K G ++ IGS + +        + YAA+KA +   +RS+  E  K+ +
Sbjct: 113 QRASRSMQRNKFGRMIFIGSVSGLW--GIGNQANYAASKAGVIGMARSIARELSKANV 168

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 68.4 bits (166), Expect = 3e-14
 Identities = 29/184 (15%), Positives = 61/184 (33%), Gaps = 7/184 (3%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKL-KDVSDSIQAKYAKTQIKSVVVDFS 114
            +++G   GIG +    L   G  +V +     ++  D+S +   K A   I  V+   S
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQA---IADVLAKCS 60

Query: 115 GDLDEGVER--IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKV 172
             +D  V    +    + L   V +N  G +     F   + +      + ++   +  +
Sbjct: 61  KGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHL 120

Query: 173 TQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGID 232
                P  L  + G      +              YA +K  +    R     + ++G+ 
Sbjct: 121 AFDKNPLALALEAGEEAKARAIVEHAGEQ-GGNLAYAGSKNALTVAVRKRAAAWGEAGVR 179

Query: 233 VQCQ 236
           +   
Sbjct: 180 LNTI 183

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 57.6 bits (138), Expect = 7e-11
 Identities = 33/193 (17%), Positives = 56/193 (29%), Gaps = 20/193 (10%)

Query: 40  VNFLRPAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQA 99
           V  +  A      G  A+V   T  +G   A  LA  G  +VL GR  DK +  +DS+  
Sbjct: 10  VALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNK 69

Query: 100 KYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK 159
           ++      +   D             EA++G     +     I          + Q   +
Sbjct: 70  RFKVNVTAAETADD--------ASRAEAVKGAH--FVFTAGAIG------LELLPQAAWQ 113

Query: 160 NLIKVNV-EGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQF 218
           N   + +           + G+    KG           +             +A I + 
Sbjct: 114 NESSIEIVADYNAQPPLGIGGIDATDKGKEYGGKRAFGALGIGG---LKLKLHRACIAKL 170

Query: 219 SRSLYVEYRKSGI 231
             S    +    I
Sbjct: 171 FESSEGVFDAEEI 183

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 52.4 bits (124), Expect = 1e-08
 Identities = 39/213 (18%), Positives = 60/213 (28%), Gaps = 33/213 (15%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQI-------- 106
           ALVTG    +G+S A  L   G  + L   R+  +   +S ++ A+   + I        
Sbjct: 5   ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64

Query: 107 ----------KSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARF------- 149
                      S  V       E V          DV V   +     P  R        
Sbjct: 65  VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEP 124

Query: 150 ---FHEVDQVLLKNLIKVNVEG----TTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD 202
                E  +    +L   N              V     K +      I    A+     
Sbjct: 125 CVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL 184

Query: 203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
             Y++Y   K  ++  +RS  +E     I V  
Sbjct: 185 LGYTIYTMAKGALEGLTRSAALELAPLQIRVNG 217

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 51.2 bits (121), Expect = 3e-08
 Identities = 31/174 (17%), Positives = 58/174 (33%), Gaps = 9/174 (5%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS 114
            LVTG T G+G   A  LA+ G  +L+LV R+        + +    A     +V     
Sbjct: 12  VLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDV 71

Query: 115 GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQ 174
            D +   E +    + + +  + +              +    ++   +  V G   + +
Sbjct: 72  TDRESVRELLGGIGDDVPLSAVFHAAATLDDG--TVDTLTGERIERASRAKVLGARNLHE 129

Query: 175 AVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRK 228
                  +    A V   S A+      P    YA   AY+D  ++    +   
Sbjct: 130 ----LTRELDLTAFVLFSSFASAF--GAPGLGGYAPGNAYLDGLAQQRRSDGLP 177

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 48.9 bits (115), Expect = 1e-07
 Identities = 23/180 (12%), Positives = 50/180 (27%), Gaps = 7/180 (3%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           AL+ G T  +GK  A +LA  G  +V+  R  +K +  +   +       I  +  + + 
Sbjct: 4   ALLGG-TGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAA 62

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
           +  +           +D     +   I          V           + E +     A
Sbjct: 63  EACDIAVLTIPWEHAID--TARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIVA 120

Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQC 235
            +    K          +  A    +      +       D  S+ + +        ++ 
Sbjct: 121 EVLESEKVVSALHTIPAARFA----NLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRP 176

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 49.3 bits (116), Expect = 1e-07
 Identities = 25/183 (13%), Positives = 53/183 (28%), Gaps = 7/183 (3%)

Query: 56  ALVTGPTD--GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF 113
            L+ G  +   I    A      G  L     N + L+     I  +     +  + V  
Sbjct: 8   GLIVGVANNKSIAYGIAQSCFNQGATLAFTYLN-ESLEKRVRPIAQELNSPYVYELDVSK 66

Query: 114 SGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT 173
                     +K+ +  LD  V  ++V  +   A     ++         + +   + + 
Sbjct: 67  EEHFKSLYNSVKKDLGSLDFIV--HSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIE 124

Query: 174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDV 233
                  L     +++ +    +    +          KA ++   R L V+  K  I V
Sbjct: 125 LTNTLKPLLNNGASVLTLSYLGSTKYMAHYNV--MGLAKAALESAVRYLAVDLGKHHIRV 182

Query: 234 QCQ 236
              
Sbjct: 183 NAL 185

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 42.1 bits (97), Expect = 2e-05
 Identities = 11/39 (28%), Positives = 15/39 (38%), Gaps = 2/39 (5%)

Query: 56 ALVTGP--TDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD 92
           LV+G      I    A    + G  LVL G +  +L  
Sbjct: 9  ILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ 47

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 41.7 bits (96), Expect = 4e-05
 Identities = 11/56 (19%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 53  GSWALVTG--PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQI 106
           G  A + G    +G G + A  LA  G  +++    P      +   + K+ ++++
Sbjct: 8   GKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRV 63

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (93), Expect = 1e-04
 Identities = 32/180 (17%), Positives = 49/180 (27%), Gaps = 17/180 (9%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG 115
           AL+TG T   G   A  L + G  +  + R              K  +  I+  +    G
Sbjct: 4   ALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYG 63

Query: 116 DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQA 175
           DL +    +K   E     +           +    E           V+  GT ++  A
Sbjct: 64  DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYT-------ADVDGVGTLRLLDA 116

Query: 176 VLPGMLKRKKGAIVNIGSGAAIVIP-------SDPLY--SVYAATKAYIDQFSRSLYVEY 226
           V    L           +              + P Y  S Y A K Y      +    Y
Sbjct: 117 VKTCGLINSV-KFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY 175

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 39.8 bits (92), Expect = 2e-04
 Identities = 36/185 (19%), Positives = 62/185 (33%), Gaps = 28/185 (15%)

Query: 56  ALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-----NPDKLKDVSDSIQAKYAKTQIKSVV 110
           AL+TG T   G   A  L + G  +  + R     N +++  +         K  +    
Sbjct: 4   ALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHL---- 59

Query: 111 VDFSGDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTT 170
               GDL +    +   +  +    + N   +S+    F              V+  GT 
Sbjct: 60  --HYGDLSD-TSNLTRILREVQPDEVYNLGAMSHVAVSFESPEY------TADVDAMGTL 110

Query: 171 KVTQAVLPGMLKRKKGAIVNIGS----GAAIVIP---SDPLY--SVYAATKAYIDQFSRS 221
           ++ +A+    L+ KK       +    G    IP   + P Y  S YA  K Y    + +
Sbjct: 111 RLLEAIRFLGLE-KKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVN 169

Query: 222 LYVEY 226
               Y
Sbjct: 170 YRESY 174

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 38.7 bits (88), Expect = 4e-04
 Identities = 10/57 (17%), Positives = 20/57 (35%), Gaps = 2/57 (3%)

Query: 56  ALVTGP--TDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVV 110
             + G   T+G G   A +L+K  + ++     P     + +    K+    I    
Sbjct: 5   CFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 38.3 bits (87), Expect = 5e-04
 Identities = 18/60 (30%), Positives = 25/60 (41%)

Query: 53  GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD 112
           GS  LVTG    +      QL + G  +    R+  KL ++     AKY      +VV D
Sbjct: 11  GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVED 70

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 36.2 bits (82), Expect = 0.003
 Identities = 17/98 (17%), Positives = 24/98 (24%), Gaps = 9/98 (9%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
            V G T   G S     A  G ++     +                + Q    V  F G 
Sbjct: 7   AVVGATGRQGASLIRVAAAVGHHVRAQVHSLKG---------LIAEELQAIPNVTLFQGP 57

Query: 117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVD 154
           L   V  +    EG  +  +          A      D
Sbjct: 58  LLNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLAD 95

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 36.0 bits (82), Expect = 0.003
 Identities = 22/184 (11%), Positives = 47/184 (25%), Gaps = 50/184 (27%)

Query: 57  LVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD 116
            + G    +G +   QL + G ++ LV R  D+L ++ DS                    
Sbjct: 6   FIAGHRGMVGSAIRRQLEQRG-DVELVLRTRDEL-NLLDS-------------------- 43

Query: 117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAV 176
                  + +      +  +                         I  N+   + +    
Sbjct: 44  -----RAVHDFFASERIDQVYLAAAKVGGIVANNTYPAD-----FIYQNMMIESNI---- 89

Query: 177 LPGMLKRKKGAIVNIGSGAA--------------IVIPSDPLYSVYAATKAYIDQFSRSL 222
           +    +     ++ +GS                 +    +P    YA  K    +   S 
Sbjct: 90  IHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESY 149

Query: 223 YVEY 226
             +Y
Sbjct: 150 NRQY 153

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	255
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.98
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.97
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.97
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.95
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.85
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.79
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.71
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.7
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.7
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.69
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.67
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.66
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.66
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.63
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.63
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.63
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.62
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.61
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.6
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.58
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.56
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.53
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.52
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.51
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.49
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.49
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.46
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.38
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.18
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.17
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.12
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	99.1
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.05
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.01
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.98
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.94
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.41
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	98.38
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	98.35
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	98.31
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.29
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.23
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.14
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	98.07
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	98.03
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.93
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.92
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.88
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.83
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.83
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.79
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.78
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.76
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.74
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.55
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.55
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.54
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.53
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.49
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.46
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.41
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.39
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.38
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.37
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.36
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.35
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	97.35
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	97.34
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	97.33
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	97.28
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.28
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	97.28
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.19
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.19
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.18
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	97.17
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.14
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.1
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.08
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.07
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.05
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.05
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.02
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.99
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.95
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.92
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.89
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.88
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.86
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.75
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.75
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.74
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.73
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.72
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	96.68
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.62
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.6
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.55
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.48
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.47
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.45
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.44
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.43
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.43
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	96.38
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.34
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	96.33
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.27
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.21
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.19
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	96.18
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	96.14
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	96.13
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.03
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.97
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.91
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.81
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.77
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.76
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.69
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.53
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.34
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.21
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	95.17
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	95.1
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.02
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	94.83
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	94.81
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	94.48
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	94.38
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	94.3
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.26
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	94.24
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	94.05
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	93.94
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	93.72
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	93.68
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.55
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	93.34
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.32
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	93.31
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	93.2
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	93.19
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	93.12
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	93.09
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	93.06
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.06
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	92.91
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	92.86
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	92.82
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	92.77
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	92.7
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	92.63
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	92.53
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	92.43
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	92.33
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	92.32
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	92.32
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	92.08
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	92.05
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	91.99
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	91.96
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	91.83
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	91.8
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	91.77
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	91.68
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	91.61
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	91.49
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	91.45
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	91.29
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	91.12
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	91.08
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	90.99
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	90.85
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	90.55
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	90.52
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	90.41
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	90.4
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	90.4
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	90.36
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	90.32
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	90.27
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	90.2
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	90.19
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	90.15
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	90.15
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	90.11
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	90.03
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	89.9
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	89.81
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	89.65
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	89.55
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	89.51
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	89.41
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	89.39
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	89.14
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	89.08
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	88.87
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	88.8
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	88.68
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	88.6
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	88.42
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	88.29
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	88.28
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	88.06
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	87.87
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	87.73
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	87.69
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	87.49
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	87.16
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	87.13
d2h00a1	250	Methyltransferase 10 domain containing protein MET	86.73
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	86.62
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	86.45
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	86.0
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	85.98
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	85.97
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	85.86
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	85.86
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	85.86
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	85.85
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	85.63
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	85.38
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	85.3
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	85.22
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	84.67
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	84.63
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	84.62
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	83.88
d1mb3a_	123	Cell division response regulator DivK {Caulobacter	83.78
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	83.61
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	83.53
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	83.38
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	83.32
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	83.27
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	83.2
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	82.96
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	82.69
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	82.58
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	82.52
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	82.35
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	82.32
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	82.2
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	82.12
d1ko7a2	169	HPr kinase HprK C-terminal domain {Staphylococcus	82.03
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	81.96
d1onfa1	259	Glutathione reductase {Plasmodium falciparum [TaxI	81.96
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	81.69
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	81.66
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	81.63
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	81.5
d1mvoa_	121	PhoP receiver domain {Bacillus subtilis [TaxId: 14	81.45
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	81.43
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	81.36
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	81.18
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	80.75
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	80.46
d1ys7a2	121	Transcriptional regulatory protein PrrA, N-termina	80.38
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	80.13

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=2.7e-47  Score=315.92  Aligned_cols=196  Identities=22%  Similarity=0.262  Sum_probs=181.4

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.+++.++..+.+|++|  ++++.++++.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            367999999999999999999999999999999999999999999999888778889999999998  467788888898


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++++  |+||||||+..+ ..++++++.++|+++|++|+.++++++|+++|+|+++++|+||++||..+..  +.|+..+
T Consensus        81 ~G~i--DiLVnnAG~~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~--~~~~~~~  155 (258)
T d1iy8a_          81 FGRI--DGFFNNAGIEGK-QNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR--GIGNQSG  155 (258)
T ss_dssp             HSCC--SEEEECCCCCCC-CBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS--BCSSBHH
T ss_pred             hCCC--CEEEECCccccc-CCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhcc--CCCCchH
Confidence            8865  599999998643 3568899999999999999999999999999999999999999999999988  7889999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      |++||+|+.+|+++|+.|++++||+||+|+||+++|||.++..
T Consensus       156 Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~  198 (258)
T d1iy8a_         156 YAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSM  198 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHH
Confidence            9999999999999999999999999999999999999987664

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=4.2e-46  Score=307.53  Aligned_cols=195  Identities=25%  Similarity=0.330  Sum_probs=176.4

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.+ +.++..+.+|+++  ++++.++++.+.
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5679999999999999999999999999999999999999999999987766 4568889999997  457788888888


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++++  |+||||||+...  .++.+.+.++|++.+++|+.++++++|+++|+|++++.|+||+++|..+... +.++..+
T Consensus        81 ~g~i--DiLVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~-~~~~~~~  155 (251)
T d1vl8a_          81 FGKL--DTVVNAAGINRR--HPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV-TMPNISA  155 (251)
T ss_dssp             HSCC--CEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC-CSSSCHH
T ss_pred             cCCC--CEEEECCCCCCC--CChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccc-cCccccc
Confidence            8865  599999998754  6799999999999999999999999999999999999999999999765431 5677899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      |++||+|+.+|+++|+.|++++|||||+|+||+++|||.++..
T Consensus       156 Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~  198 (251)
T d1vl8a_         156 YAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVF  198 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHH
T ss_pred             hHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhcc
Confidence            9999999999999999999999999999999999999998764

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7.7e-47  Score=310.56  Aligned_cols=191  Identities=26%  Similarity=0.378  Sum_probs=174.4

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++.     .+...+.+|+++  ++++.++++.+.
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG-----ANGKGLMLNVTDPASIESVLEKIRAE   75 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG-----GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-----CCCcEEEEEecCHHHhhhhhhhhhcc
Confidence            3679999999999999999999999999999999999999998888773     346778999997  357788888888


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|+||||||....  .++.+.+.++|++.+++|+.++++++|+++|+|+++++|+||++||.++..  +.++..+
T Consensus        76 ~g~--iDilVnnAg~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~--~~~~~~~  149 (243)
T d1q7ba_          76 FGE--VDILVNNAGITRD--NLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTM--GNGGQAN  149 (243)
T ss_dssp             TCS--CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH--CCTTCHH
T ss_pred             cCC--cceehhhhhhccc--cccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcC--CCCCCHH
Confidence            885  5599999999765  678999999999999999999999999999999999999999999999988  7789999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhhh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLVM  251 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~  251 (255)
                      |++||+|+.+|+++|+.|++++||+||+|+||+++|||.+.+.+
T Consensus       150 Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~  193 (243)
T d1q7ba_         150 YAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSD  193 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCH
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhh
Confidence            99999999999999999999999999999999999999877653

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=2.3e-46  Score=310.90  Aligned_cols=193  Identities=24%  Similarity=0.308  Sum_probs=171.0

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCC-hhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      ++||++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++.+.+ +.++..+.+|++|  ++++.++++.+.
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            579999999999999999999999999999999997 567788888887765 4578899999998  457788888888


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|+||||||+...  .++.+.+.++|+++|++|+.++++++|+++|+|++++.|+||++||.++..  +.|+..+
T Consensus        81 ~G~--iDiLVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~--~~~~~~~  154 (260)
T d1x1ta1          81 MGR--IDILVNNAGIQHT--ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLV--ASANKSA  154 (260)
T ss_dssp             HSC--CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTCHH
T ss_pred             hCC--CcEEEeecccccC--CchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeeccccccee--ccCCcch
Confidence            886  4599999998754  679999999999999999999999999999999999999999999999998  7889999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      |++||+|+.+|+++|+.|++++||+||+|+||+++|||+++..
T Consensus       155 Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  197 (260)
T d1x1ta1         155 YVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQI  197 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------
T ss_pred             hhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhh
Confidence            9999999999999999999999999999999999999987654

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3.6e-46  Score=306.43  Aligned_cols=191  Identities=24%  Similarity=0.264  Sum_probs=174.9

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++.     .+...+.+|++|  ++++.++++.+.
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~   77 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-----DAARYVHLDVTQPAQWKAAVDTAVTA   77 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-----GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh-----CcceEEEeecCCHHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999999999988887763     356788999998  457888888888


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|+||||||+...  .++++.+.++|+++|++|+.++++++|.++|.|+++++|+||++||..+..  +.++..+
T Consensus        78 ~g~--idilinnAG~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~--~~~~~~~  151 (244)
T d1nffa_          78 FGG--LHVLVNNAGILNI--GTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLA--GTVACHG  151 (244)
T ss_dssp             HSC--CCEEEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTBHH
T ss_pred             hCC--CeEEEECCcccCC--CchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccc--ccccccc
Confidence            886  4599999998754  678999999999999999999999999999999999999999999999988  7889999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhhh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLVM  251 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~  251 (255)
                      |++||+|+.+|+|+|+.|++++||+||+|+||+++|||.+...+
T Consensus       152 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~  195 (244)
T d1nffa_         152 YTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPE  195 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCT
T ss_pred             hhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhH
Confidence            99999999999999999999999999999999999999887654

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=3.5e-46  Score=309.49  Aligned_cols=195  Identities=25%  Similarity=0.322  Sum_probs=176.6

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      ++++||++|||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.+...+.+|++|.  +++.++++.+
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTVAN   81 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCCceEEEeeCCCHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999999999999999999876  45677889999973  4666677777


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .++. .+|++|||||+...  .++.+.+.++|+++|++|+.++++++|+++|+|+++++|+||++||..+..  +.|+..
T Consensus        82 ~~~~-~idilvnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~--~~~~~~  156 (259)
T d2ae2a_          82 HFHG-KLNILVNNAGIVIY--KEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL--AVPYEA  156 (259)
T ss_dssp             HTTT-CCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS--CCTTCH
T ss_pred             HhCC-CceEEEECCceecc--CccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccc--cccccc
Confidence            6663 46699999998754  668999999999999999999999999999999999999999999999988  778999


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      +|++||+|+.+|+|+|+.|++++|||||+|+||+|+|||.+...
T Consensus       157 ~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  200 (259)
T d2ae2a_         157 VYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTI  200 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHT
T ss_pred             chHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhh
Confidence            99999999999999999999999999999999999999987654

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.7e-46  Score=310.03  Aligned_cols=197  Identities=24%  Similarity=0.277  Sum_probs=159.8

Q ss_pred             cccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHH
Q 025260           47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERI  124 (255)
Q Consensus        47 ~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~  124 (255)
                      ++++++||+++||||++|||+++|++|+++|++|++++|++++++++.+++.+.+  .++..+.+|+++  ++++.++++
T Consensus         2 ~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~   79 (259)
T d1xq1a_           2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG--FQVTGSVCDASLRPEREKLMQTV   79 (259)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEeccCCCHHHHHHHHHHH
Confidence            3567889999999999999999999999999999999999999999999998764  468889999997  356777888


Q ss_pred             HHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                      .+.+++ .+|+||||||+...  .++.+.+.++|++++++|+.|+++++|+++|+|++++.|+||++||..+..  +.++
T Consensus        80 ~~~~~g-~idilvnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~--~~~~  154 (259)
T d1xq1a_          80 SSMFGG-KLDILINNLGAIRS--KPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV--SASV  154 (259)
T ss_dssp             HHHHTT-CCSEEEEECCC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC------------
T ss_pred             HHHhCC-CcccccccccccCC--CchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccc--cccc
Confidence            887743 46699999998765  678999999999999999999999999999999999999999999999988  7788


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      ..+|++||+|+.+|+++|+.|++++|||||+|+||+++|||.++..
T Consensus       155 ~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~  200 (259)
T d1xq1a_         155 GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY  200 (259)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------
T ss_pred             cccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhc
Confidence            9999999999999999999999999999999999999999988764

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.1e-46  Score=309.05  Aligned_cols=196  Identities=26%  Similarity=0.317  Sum_probs=178.5

Q ss_pred             CcccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHH
Q 025260           46 AKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVER  123 (255)
Q Consensus        46 ~~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~  123 (255)
                      ..+++++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.+  .++..+.+|+++  ++++.+++
T Consensus         4 ~d~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g--~~~~~~~~Dvs~~~~~~~~~~~   81 (255)
T d1fmca_           4 SDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG--GQAFACRCDITSEQELSALADF   81 (255)
T ss_dssp             GGGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcC--CcEEEEEccCCCHHHHHHHHHH
Confidence            35678999999999999999999999999999999999999999999999998764  467889999997  45778888


Q ss_pred             HHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC
Q 025260          124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP  203 (255)
Q Consensus       124 ~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~  203 (255)
                      +.+.++++  |+||||||+..+  .++ +.+.++|++++++|+.++++++|.++|+|+++++|+||++||.++..  +.|
T Consensus        82 ~~~~~g~i--DilvnnAG~~~~--~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~--~~~  154 (255)
T d1fmca_          82 AISKLGKV--DILVNNAGGGGP--KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN--KNI  154 (255)
T ss_dssp             HHHHHSSC--CEEEECCCCCCC--CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC--CCT
T ss_pred             HHHHcCCC--CEeeeCCcCCCC--Ccc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhc--ccc
Confidence            88888865  599999998754  444 78999999999999999999999999999999999999999999988  788


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      +..+|++||+|+.+|+|+|+.|++++||+||+|+||+|+||++++..
T Consensus       155 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  201 (255)
T d1fmca_         155 NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI  201 (255)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC
T ss_pred             ccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccC
Confidence            99999999999999999999999999999999999999999987653

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=3.2e-46  Score=308.35  Aligned_cols=193  Identities=23%  Similarity=0.306  Sum_probs=173.2

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      .++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.+  .++..+.+|++|  ++++.++++.+.
T Consensus         7 ~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~~~   84 (251)
T d2c07a1           7 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFG--YESSGYAGDVSKKEEISEVINKILTE   84 (251)
T ss_dssp             CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHh
Confidence            4779999999999999999999999999999999999999999999997753  467889999998  457778888888


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|+||||||....  .++.+.+.++|++++++|+.++++++|+++|+|++++.|+||++||.++..  +.++..+
T Consensus        85 ~g~--iDilvnnag~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~--~~~~~~~  158 (251)
T d2c07a1          85 HKN--VDILVNNAGITRD--NLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLT--GNVGQAN  158 (251)
T ss_dssp             CSC--CCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH--CCTTCHH
T ss_pred             cCC--ceeeeeccccccc--cccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcC--CCCCCHH
Confidence            885  4599999998754  668899999999999999999999999999999999999999999999988  7888999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      |++||+|+.+|+|+|+.|++++|||||+|+||+++|+|.+++.
T Consensus       159 Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~  201 (251)
T d2c07a1         159 YSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS  201 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccC
Confidence            9999999999999999999999999999999999999988764

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=9e-46  Score=303.62  Aligned_cols=190  Identities=22%  Similarity=0.252  Sum_probs=175.0

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCc-------EEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHH
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLN-------LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERI  124 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~-------V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~  124 (255)
                      ++||||||++|||+++|++|+++|++       |++.+|++++++++.+++++.  +.+...+.+|++|  ++++.++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~   79 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTTHI   79 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            57899999999999999999999998       999999999999999999876  4567889999998  457788888


Q ss_pred             HHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                      .+.+++  +|+||||||+...  .++.+.+.++|++++++|+.|+++++|+++|+|+++++|+||++||.++..  +.|+
T Consensus        80 ~~~~g~--iDilvnnAg~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~--~~~~  153 (240)
T d2bd0a1          80 VERYGH--IDCLVNNAGVGRF--GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK--AFRH  153 (240)
T ss_dssp             HHHTSC--CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTT
T ss_pred             HHHcCC--cceeecccccccC--CccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcC--CCCC
Confidence            888885  5599999998754  679999999999999999999999999999999999999999999999998  7899


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhhh
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLVM  251 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~  251 (255)
                      ..+|++||+|+.+|+++|+.|++++||+||+|+||+++|||+++..+
T Consensus       154 ~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~  200 (240)
T d2bd0a1         154 SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD  200 (240)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS
T ss_pred             ChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCH
Confidence            99999999999999999999999999999999999999999987653

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=1.1e-45  Score=304.49  Aligned_cols=191  Identities=25%  Similarity=0.336  Sum_probs=163.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|++.+  +..+.+++.  +.++..+.+|++|  ++++.++++.+.
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~~   77 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNL--GRRVLTVKCDVSQPGDVEAFGKQVIST   77 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHc--CCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            3679999999999999999999999999999999998753  233334433  4568899999998  457788888888


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++++|  +||||||+...  .++.+.+.++|++++++|+.++++++|+++|+|++++.|+||++||.++..  +.|...+
T Consensus        78 ~G~iD--ilVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~--~~~~~~~  151 (247)
T d2ew8a1          78 FGRCD--ILVNNAGIYPL--IPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL--KIEAYTH  151 (247)
T ss_dssp             HSCCC--EEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS--CCSSCHH
T ss_pred             cCCCC--EEEECCCCCCC--CChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcc--cCccccc
Confidence            88654  99999999754  679999999999999999999999999999999999999999999999988  7889999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      |++||+|+.+|+++|+.|++++||+||+|+||+++|||.+...
T Consensus       152 Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~  194 (247)
T d2ew8a1         152 YISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASA  194 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---------
T ss_pred             chhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccc
Confidence            9999999999999999999999999999999999999987654

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=6.2e-46  Score=306.71  Aligned_cols=191  Identities=23%  Similarity=0.255  Sum_probs=174.4

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.+...+.+|+++  ++++.++++.+.
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEcccCCHHHHHHHHHHHHHH
Confidence            367999999999999999999999999999999999999888877665     3467889999997  457788888888


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++++  |+||||||+...  .++.+.+.++|++++++|+.++++++|+++|+|++++.|+||++||.++..  +.++..+
T Consensus        77 ~g~i--DilVnnAg~~~~--~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~--~~~~~~~  150 (254)
T d1hdca_          77 FGSV--DGLVNNAGISTG--MFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM--GLALTSS  150 (254)
T ss_dssp             HSCC--CEEEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTCHH
T ss_pred             cCCc--cEEEecCccccc--cccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcc--cccchhh
Confidence            8864  599999999754  678999999999999999999999999999999999999999999999988  7889999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhhh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLVM  251 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~  251 (255)
                      |++||+|+.+|+|+|+.|++++|||||+|+||+++|||+++...
T Consensus       151 Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~  194 (254)
T d1hdca_         151 YGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGI  194 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCH
Confidence            99999999999999999999999999999999999999876643

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=1.3e-45  Score=306.29  Aligned_cols=193  Identities=23%  Similarity=0.280  Sum_probs=176.5

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.+  .++..+.+|++|  ++++.++++.+.
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKG--VEARSYVCDVTSEEAVIGTVDSVVRD   79 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--SCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999999999999999998763  467889999997  457888888888


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++++|  +||||||+..+ ..++.+.+.++|++.+++|+.++++++|+++|+|++++.|+||++||.++..  +.|+..+
T Consensus        80 ~g~iD--ilVnnaG~~~~-~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~--~~~~~~~  154 (260)
T d1zema1          80 FGKID--FLFNNAGYQGA-FAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK--GPPNMAA  154 (260)
T ss_dssp             HSCCC--EEEECCCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS--CCTTBHH
T ss_pred             hCCCC--eehhhhccccc-cCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhcc--CCcchHH
Confidence            88654  99999998653 3568999999999999999999999999999999999999999999999988  7789999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      |++||+|+.+|+|+|+.|++++||+||+|+||+|+|+|..+.
T Consensus       155 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~  196 (260)
T d1zema1         155 YGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWER  196 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhc
Confidence            999999999999999999999999999999999999987543

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.6e-46  Score=303.83  Aligned_cols=194  Identities=27%  Similarity=0.394  Sum_probs=175.6

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++..+.||++|  ++++.++++.+.
T Consensus         4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~~   81 (244)
T d1yb1a_           4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSAKKVKAE   81 (244)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            466999999999999999999999999999999999999999999999875  4568889999998  357777888888


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|++|||||....  .++.+.+.+.|++++++|+.|++++++.++|+|+++++|+||++||.++..  +.|++++
T Consensus        82 ~g~--idilinnag~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~--~~~~~~~  155 (244)
T d1yb1a_          82 IGD--VSILVNNAGVVYT--SDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV--SVPFLLA  155 (244)
T ss_dssp             TCC--CSEEEECCCCCCC--CCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC--CHHHHHH
T ss_pred             cCC--CceeEeecccccc--ccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcC--CCCCcHH
Confidence            885  5599999999865  557889999999999999999999999999999999999999999999998  7899999


Q ss_pred             chHHHHHHHHHHHHHHHHHcc---CCceEEEeeeeeeeeCCcchhhh
Q 025260          208 YAATKAYIDQFSRSLYVEYRK---SGIDVQCQVLFLLCFYNLNDLVM  251 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~---~gi~v~~v~Pg~v~T~~~~~~~~  251 (255)
                      |++||+|+.+|+++|+.|+.+   .||+||+|+||+|+|+|.++...
T Consensus       156 Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~~  202 (244)
T d1yb1a_         156 YCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPST  202 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcCc
Confidence            999999999999999999976   58999999999999999876543

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1e-45  Score=306.54  Aligned_cols=190  Identities=26%  Similarity=0.343  Sum_probs=174.2

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~  130 (255)
                      ||++|||||++|||+++|++|+++|++|++++|++++++++.+++++.  +.++..+.+|++|  ++++.++++.+.+++
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~   79 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVVERYGP   79 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            899999999999999999999999999999999999999999999876  3468889999998  457788888888886


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhh--hhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPG--MLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~--~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      +  |+||||||+...  .++.+.+.++|+++|++|+.++++++|+++|+  |++++.|+||+++|..+..  +.|+..+|
T Consensus        80 i--DilVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~--~~~~~~~Y  153 (257)
T d2rhca1          80 V--DVLVNNAGRPGG--GATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ--GVVHAAPY  153 (257)
T ss_dssp             C--SEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTS--CCTTCHHH
T ss_pred             C--CEEEecccccCC--CChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccc--ccccchhH
Confidence            4  599999998754  67899999999999999999999999999997  5667789999999999988  78999999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      ++||+|+.+|+|+|+.|++++|||||+|+||+++|||.+++.
T Consensus       154 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  195 (257)
T d2rhca1         154 SASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVR  195 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHH
Confidence            999999999999999999999999999999999999987764

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=3.3e-45  Score=303.12  Aligned_cols=191  Identities=24%  Similarity=0.341  Sum_probs=173.1

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      |+++||+++||||++|||+++|++|+++|++|++++|++++++++.+++     +.+...+.+|++|  ++++.++++.+
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~-----~~~~~~~~~Dvt~~~~v~~~~~~~~~   75 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-----GPAACAIALDVTDQASIDRCVAELLD   75 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEeeCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999998888776     3467889999998  45778888888


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECCccccccCCCCCc
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS~~~~~~~~~~~~  205 (255)
                      .+++  +|+||||||+...  .++.+.+.++|++.+++|+.|+++++|+++|.|+++ +.|+||++||.++..  +.|+.
T Consensus        76 ~~g~--iDilVnnAg~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~--~~~~~  149 (256)
T d1k2wa_          76 RWGS--IDILVNNAALFDL--APIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRR--GEALV  149 (256)
T ss_dssp             HHSC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--CCTTC
T ss_pred             HhCC--ccEEEeecccccc--cccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcc--ccccc
Confidence            8885  4599999998754  678999999999999999999999999999987665 479999999999998  78999


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      .+|++||+|+.+|+++|+.|++++|||||+|+||+++|||+++..
T Consensus       150 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~  194 (256)
T d1k2wa_         150 GVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVD  194 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHH
T ss_pred             cchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhh
Confidence            999999999999999999999999999999999999999987654

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=3.7e-45  Score=301.92  Aligned_cols=192  Identities=24%  Similarity=0.317  Sum_probs=174.2

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      +++||++|||||++|||+++|++|+++|++|++++|+++.++++.+++..   ..++..+.+|++|  ++++.++++.+.
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSDEDGWTKLFDATEKA   79 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC---CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            37799999999999999999999999999999999999999988888753   3468889999998  457888999999


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCC-cEEEEECCccccccCCCCCch
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKK-GAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~-g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      ++++|  +||||||....  .++.+.+.++|+++|++|+.++++++|+++|+|++++. |+||++||..+..  +.|...
T Consensus        80 ~G~iD--iLVnnAg~~~~--~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~--~~~~~~  153 (251)
T d1zk4a1          80 FGPVS--TLVNNAGIAVN--KSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV--GDPSLG  153 (251)
T ss_dssp             HSSCC--EEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS--CCTTCH
T ss_pred             hCCce--EEEeccccccc--cchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceec--cCCCch
Confidence            98655  99999999865  67999999999999999999999999999999998875 4899999999988  788999


Q ss_pred             hchHHHHHHHHHHHHHHHH--HccCCceEEEeeeeeeeeCCcchhh
Q 025260          207 VYAATKAYIDQFSRSLYVE--YRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e--~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      +|++||+|+.+|+++++.|  +.++||+||+|+||+++|||.++..
T Consensus       154 ~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~  199 (251)
T d1zk4a1         154 AYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP  199 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST
T ss_pred             hHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcC
Confidence            9999999999999999999  5688999999999999999987765

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=9.7e-45  Score=300.89  Aligned_cols=193  Identities=22%  Similarity=0.277  Sum_probs=173.5

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh-hhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP-DKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+. +.++++.+++++.  +.++..+.+|++|  ++++.++++.+
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            47799999999999999999999999999999999985 5677888888775  4467889999997  45778888888


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCc-EEEEECCccccccCCCCCc
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKG-AIVNIGSGAAIVIPSDPLY  205 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g-~iv~vsS~~~~~~~~~~~~  205 (255)
                      ++++  +|+||||||+..+  .++.+.+.++|++++++|+.++++++|+++|+|++++.| +||++||.++..  +.|..
T Consensus        82 ~~G~--iDiLVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~--~~~~~  155 (261)
T d1geea_          82 EFGK--LDVMINNAGLENP--VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI--PWPLF  155 (261)
T ss_dssp             HHSC--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS--CCTTC
T ss_pred             HhCC--CCEeeccceecCC--cchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcc--cCccc
Confidence            8886  4599999999765  668999999999999999999999999999999888755 599999999988  78999


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      .+|++||+|+.+|+++|+.|++++||+||+|+||+++|||.++..
T Consensus       156 ~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~  200 (261)
T d1geea_         156 VHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKF  200 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHH
T ss_pred             cccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhc
Confidence            999999999999999999999999999999999999999987653

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-45  Score=301.04  Aligned_cols=189  Identities=22%  Similarity=0.324  Sum_probs=169.2

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+++++++..+++      .....+.+|++|  ++++.++++.+.
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~------~~~~~~~~Dvs~~~~v~~~~~~~~~~   76 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILCDVTQEDDVKTLVSETIRR   76 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc------CCCeEEEccCCCHHHHHHHHHHHHHh
Confidence            467999999999999999999999999999999999998888776654      235778999997  467788888888


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++++|  +||||||+... ..++++.+.++|++++++|+.++++++|+++|+|+++ +|+||++||..+..  +.|...+
T Consensus        77 ~g~iD--ilVnnAG~~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~Ii~isS~~~~~--~~~~~~~  150 (250)
T d1ydea1          77 FGRLD--CVVNNAGHHPP-PQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAI--GQAQAVP  150 (250)
T ss_dssp             HSCCC--EEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHH--CCTTCHH
T ss_pred             cCCCC--EEEeccccccc-ccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-CCCCcccccccccc--cccCcch
Confidence            88654  99999997643 3567899999999999999999999999999999765 59999999999988  7788999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      |++||+|+.+|+++|+.|++++|||||+|+||+|+|||+++..
T Consensus       151 Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~  193 (250)
T d1ydea1         151 YVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELA  193 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHH
T ss_pred             hHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHh
Confidence            9999999999999999999999999999999999999987664

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=7.9e-45  Score=300.77  Aligned_cols=190  Identities=25%  Similarity=0.345  Sum_probs=173.2

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~  130 (255)
                      .|++|||||++|||+++|++|+++|++|++++|++++++++.+++++.+  .++..+.+|++|  ++++.++++.+.+++
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG--GHAVAVKVDVSDRDQVFAAVEQARKTLGG   78 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            4789999999999999999999999999999999999999999998764  467889999998  457788888888885


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECCccccccCCCCCchhch
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGSGAAIVIPSDPLYSVYA  209 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS~~~~~~~~~~~~~~Y~  209 (255)
                        +|+||||||+...  .++.+++.++|++++++|+.|+++++|+++|+|++++ .|+||++||.++..  +.|+..+|+
T Consensus        79 --iDilVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~--~~~~~~~Y~  152 (255)
T d1gega_          79 --FDVIVNNAGVAPS--TPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV--GNPELAVYS  152 (255)
T ss_dssp             --CCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--CCTTBHHHH
T ss_pred             --ccEEEeccccccc--CcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcc--cCcccccch
Confidence              5599999998754  6799999999999999999999999999999887665 68899999999988  789999999


Q ss_pred             HHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          210 ATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      +||+|+.+|+++|+.|++++|||||+|+||+++|||++++.
T Consensus       153 asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  193 (255)
T d1gega_         153 SSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEID  193 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHH
T ss_pred             hCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhh
Confidence            99999999999999999999999999999999999987764

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=4.6e-45  Score=300.08  Aligned_cols=189  Identities=27%  Similarity=0.332  Sum_probs=172.1

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEe-CChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHhcC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAIEG  130 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~  130 (255)
                      ++||||||++|||+++|++|+++|++|++.+ |+++.++++.+++++.  +.++..+.+|++|  ++++.++++.+.+++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999875 6778888888888765  3577889999998  457788888888885


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchH
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA  210 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~a  210 (255)
                        +|+||||||....  .++.+.+.++|++++++|+.++++++|+++|+|+++++|+||++||.++..  +.++..+|++
T Consensus        80 --iDiLVnnAg~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~--~~~~~~~Y~a  153 (244)
T d1edoa_          80 --IDVVVNNAGITRD--TLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI--GNIGQANYAA  153 (244)
T ss_dssp             --CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH--CCTTCHHHHH
T ss_pred             --CCccccccccccc--cchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcC--CCCCCHHHHH
Confidence              5599999998765  679999999999999999999999999999999999999999999999998  7889999999


Q ss_pred             HHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          211 TKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       211 sK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      ||+|+.+|+++|+.|++++|||||+|+||+++|||.+++.
T Consensus       154 sKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~  193 (244)
T d1edoa_         154 AKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLG  193 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC
T ss_pred             HHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhh
Confidence            9999999999999999999999999999999999988764

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=1.7e-44  Score=300.90  Aligned_cols=194  Identities=25%  Similarity=0.310  Sum_probs=173.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      +++||+||||||++|||+++|++|+++|++|++++|++++++++.+++..   ...+..+.+|++|  ++++.++++.+.
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDTTIAK   79 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC---CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            47799999999999999999999999999999999999999999988854   2346778999997  467788888888


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC-ch
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL-YS  206 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~-~~  206 (255)
                      ++++  |+||||||+....+..+.+.+.++|++++++|+.|+++++|+++|+|+++++|+||++||..+..  +.++ ..
T Consensus        80 ~g~i--D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~--~~~~~~~  155 (268)
T d2bgka1          80 HGKL--DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFT--AGEGVSH  155 (268)
T ss_dssp             HSCC--CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTC--CCTTSCH
T ss_pred             cCCc--ceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccc--ccccccc
Confidence            8865  59999999876544567899999999999999999999999999999999999999999998887  4343 45


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      .|++||+|+.+|+++|+.|++++|||||+|+||+++|||.++..
T Consensus       156 ~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  199 (268)
T d2bgka1         156 VYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVF  199 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSS
T ss_pred             ccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhh
Confidence            89999999999999999999999999999999999999987754

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.6e-44  Score=301.88  Aligned_cols=197  Identities=23%  Similarity=0.318  Sum_probs=177.7

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcC-CceEEEEEEECCC--CcHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYA-KTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++.+.+. ..++..+.+|+++  ++++.++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            46799999999999999999999999999999999999999999999987653 3578999999998  45788888999


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .++++  |++|||||.......+..+.+.|+|++.+++|+.++++++|+++|+|+++++|+|+++||.++..  +.++..
T Consensus        81 ~~G~i--DilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~--~~~~~~  156 (274)
T d1xhla_          81 KFGKI--DILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQ--AHSGYP  156 (274)
T ss_dssp             HHSCC--CEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSS--CCTTSH
T ss_pred             HcCCc--eEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccc--cCCCCc
Confidence            88864  59999999865544556778999999999999999999999999999999899999999988877  778899


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      +|++||+|+.+|+|+|+.|++++|||||+|+||+|+|||.+...
T Consensus       157 ~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~  200 (274)
T d1xhla_         157 YYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMG  200 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTT
T ss_pred             eehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhc
Confidence            99999999999999999999999999999999999999876553

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=7.7e-45  Score=299.34  Aligned_cols=185  Identities=25%  Similarity=0.286  Sum_probs=166.0

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~  128 (255)
                      ++||++|||||++|||+++|++|+++|++|++++|+++..+ ..+++     +  ...+.+|++|  ++++.++++.+.+
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~-----~--~~~~~~Dv~~~~~v~~~~~~~~~~~   74 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI-----G--GAFFQVDLEDERERVRFVEEAAYAL   74 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH-----T--CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc-----C--CeEEEEeCCCHHHHHHHHHHHHHhc
Confidence            67999999999999999999999999999999999987543 33333     2  2457899997  4578888899988


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      +++|  +||||||+..+  .++.+.+.++|+++|++|+.|+++++|+++|+|++++.|+||++||..+..  +.|...+|
T Consensus        75 G~iD--iLVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~--~~~~~~~Y  148 (248)
T d2d1ya1          75 GRVD--VLVNNAAIAAP--GSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF--AEQENAAY  148 (248)
T ss_dssp             SCCC--EEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS--BCTTBHHH
T ss_pred             CCCC--eEEEeCcCCCC--CChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccc--cccccchh
Confidence            8655  99999998755  679999999999999999999999999999999999999999999999988  77899999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ++||+|+.+|+++|+.|++++||+||+|+||+++|||.++.
T Consensus       149 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~  189 (248)
T d2d1ya1         149 NASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEA  189 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHH
Confidence            99999999999999999999999999999999999987654

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=3.7e-44  Score=294.30  Aligned_cols=189  Identities=21%  Similarity=0.287  Sum_probs=168.2

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      |+++||+++||||++|||+++|++|+++|++|++++|+++++++..+++       ....+.+|++|  ++++.++++.+
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~   73 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVMDVADPASVERGFAEALA   73 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------TCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-------CCeEEEEecCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999999888876654       24567899997  46788888899


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .+++  +|+||||||+..+  .++.+.+.++|++.+++|+.++++++|+++|+|++++.++++++||. +..  +.|+..
T Consensus        74 ~~g~--iDilVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~-~~~--~~~~~~  146 (242)
T d1ulsa_          74 HLGR--LDGVVHYAGITRD--NFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASR-VYL--GNLGQA  146 (242)
T ss_dssp             HHSS--CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCG-GGG--CCTTCH
T ss_pred             hcCC--ceEEEECCccccc--CchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccc-ccc--CCCCCc
Confidence            8886  4599999998754  67899999999999999999999999999999998888888888875 444  568899


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhhh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLVM  251 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~  251 (255)
                      +|++||+|+.+|+++|+.|++++|||||+|+||+++|||.++..+
T Consensus       147 ~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~  191 (242)
T d1ulsa_         147 NYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPE  191 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCH
Confidence            999999999999999999999999999999999999999987653

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=2e-44  Score=297.72  Aligned_cols=189  Identities=23%  Similarity=0.259  Sum_probs=170.0

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++     +.+...+.+|+++  ++++.++++.+.
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~   77 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEeecCCHHHHHHHHHHHHHH
Confidence            367999999999999999999999999999999999999999888876     3456788999997  457788888888


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++++|  +||||||+..+  .++.+.+.++|++++++|+.++++++|+++|+|+++ +|+||++||.++..  +.+...+
T Consensus        78 ~g~iD--ilVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~G~Iv~isS~~~~~--~~~~~~~  150 (253)
T d1hxha_          78 LGTLN--VLVNNAGILLP--GDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-GGSIINMASVSSWL--PIEQYAG  150 (253)
T ss_dssp             HCSCC--EEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTS--CCTTBHH
T ss_pred             hCCCC--eEEecccccCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-CCceecccchhhhc--Ccccccc
Confidence            88655  99999999765  678999999999999999999999999999999754 59999999999988  7889999


Q ss_pred             chHHHHHHHHHHHHHHHHHcc--CCceEEEeeeeeeeeCCcchhh
Q 025260          208 YAATKAYIDQFSRSLYVEYRK--SGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~--~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      |++||+|+.+|+++++.|+++  +|||||+|+||+++|||.+...
T Consensus       151 Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~  195 (253)
T d1hxha_         151 YSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASL  195 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHS
T ss_pred             ccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhC
Confidence            999999999999999999987  4599999999999999976543

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=5.8e-44  Score=295.79  Aligned_cols=196  Identities=22%  Similarity=0.328  Sum_probs=171.3

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      ++++||+||||||++|||+++|++|+++|++|++++|++++++++.+++++.+  ..+..+.+|+++  ++++.++++.+
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~--~~~~~~~~D~s~~~~~~~~~~~~~~   79 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG--LNVEGSVCDLLSRTERDKLMQTVAH   79 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CCceEEEeecCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999999999999998764  457788999997  35667777777


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .+++ .+|+||||||....  .++.+.+.++|++++++|+.++++++++++|.|.+++.|+||++||..+..  +.|...
T Consensus        80 ~~~g-~idilinnag~~~~--~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~--~~~~~~  154 (258)
T d1ae1a_          80 VFDG-KLNILVNNAGVVIH--KEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS--ALPSVS  154 (258)
T ss_dssp             HTTS-CCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTS--CCTTCH
T ss_pred             HhCC-CcEEEecccccccc--CccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccc--ccccch
Confidence            7743 46699999999865  678999999999999999999999999999999999999999999999988  788999


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhhh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLVM  251 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~  251 (255)
                      +|+++|+|+.+|++.|++|++++|||||+|+||+++|||.++...
T Consensus       155 ~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~  199 (258)
T d1ae1a_         155 LYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIK  199 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---------
T ss_pred             hHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhh
Confidence            999999999999999999999999999999999999999887654

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=4.1e-44  Score=297.90  Aligned_cols=196  Identities=26%  Similarity=0.382  Sum_probs=161.9

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhc-CCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKY-AKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++.+.+ +..++..+.+|+++  ++++.++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999999999999999998764 34569999999997  45778888888


Q ss_pred             HhcCCCccEEEEecCCCCC--cccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcc-ccccCCCC
Q 025260          127 AIEGLDVGVLINNVGISYP--YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGA-AIVIPSDP  203 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~-~~~~~~~~  203 (255)
                      .++++|  +||||||+..+  ...++.+.+.|+|++.|++|+.++++++|+++|+|++++ |++|+++|.. +..  +.|
T Consensus        82 ~~g~iD--ilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~--~~~  156 (264)
T d1spxa_          82 KFGKLD--ILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLH--ATP  156 (264)
T ss_dssp             HHSCCC--EEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSS--CCT
T ss_pred             HhCCCC--EeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-Ccceeeeeeccccc--cCC
Confidence            888655  99999998643  123466779999999999999999999999999997664 5666666654 555  678


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      ...+|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|.+...
T Consensus       157 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~  203 (264)
T d1spxa_         157 DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMG  203 (264)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC-----
T ss_pred             CchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccC
Confidence            89999999999999999999999999999999999999999987654

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=5.5e-44  Score=298.35  Aligned_cols=196  Identities=27%  Similarity=0.398  Sum_probs=170.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhc-CCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKY-AKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|++++++++.+++.+.+ .+.++..+.+|+++  ++++.++++.+
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4779999999999999999999999999999999999999999999998764 34579999999998  45778888888


Q ss_pred             HhcCCCccEEEEecCCCCCc--ccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECC-ccccccCCCC
Q 025260          127 AIEGLDVGVLINNVGISYPY--ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGS-GAAIVIPSDP  203 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS-~~~~~~~~~~  203 (255)
                      .++++|  +||||||+..+.  .....+.+.++|++++++|+.++++++|+++|+|++++ |++|+++| .++..  +.|
T Consensus        82 ~~g~iD--ilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~Ss~a~~~--~~~  156 (272)
T d1xkqa_          82 QFGKID--VLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQ--AQP  156 (272)
T ss_dssp             HHSCCC--EEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSS--CCC
T ss_pred             HhCCce--EEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-Cccccccchhcccc--CCC
Confidence            888655  999999987542  12235678889999999999999999999999998765 45555554 56676  778


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      +..+|++||+|+.+|+++|+.|++++|||||+|+||+|+|||.+...
T Consensus       157 ~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  203 (272)
T d1xkqa_         157 DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMG  203 (272)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTT
T ss_pred             CcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccC
Confidence            89999999999999999999999999999999999999999987653

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.1e-44  Score=294.80  Aligned_cols=182  Identities=25%  Similarity=0.290  Sum_probs=158.4

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      +++||++|||||++|||+++|++|+++|++|++++|+++..+             .+..+.+|++|  ++++.++++.+.
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~-------------~~~~~~~Dv~~~~~v~~~~~~~~~~   70 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-------------GLFGVEVDVTDSDAVDRAFTAVEEH   70 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-------------TSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc-------------CceEEEEecCCHHHHHHHHHHHHHh
Confidence            477999999999999999999999999999999999976532             35678999998  457788888988


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|+||||||+..+  .++.+.+.|+|++++++|+.++++++|.++|+|++++.|+||++||.++..  +.++..+
T Consensus        71 ~g~--iDiLVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~--~~~~~~~  144 (237)
T d1uzma1          71 QGP--VEVLVSNAGLSAD--AFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW--GIGNQAN  144 (237)
T ss_dssp             HSS--CSEEEEECSCCC-------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-------CCHH
T ss_pred             cCC--ceEEEeeeccccc--ccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhcc--CCcccHH
Confidence            886  4599999998754  678999999999999999999999999999999999999999999999988  7788999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      |++||+|+.+|+++|+.|+.++||+||+|+||+++|+|.+.+.
T Consensus       145 Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~  187 (237)
T d1uzma1         145 YAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALD  187 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSC
T ss_pred             HHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccC
Confidence            9999999999999999999999999999999999999987654

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.3e-44  Score=292.94  Aligned_cols=188  Identities=27%  Similarity=0.327  Sum_probs=166.6

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      ++++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.      .+..+.+|++|.  +.++++.+++
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~------~~~~~~~Dv~~~--~~v~~~~~~~   72 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP------GIEPVCVDLGDW--DATEKALGGI   72 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST------TCEEEECCTTCH--HHHHHHHTTC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC------CCeEEEEeCCCH--HHHHHHHHHc
Confidence            45789999999999999999999999999999999999998887776542      356678999975  5566666666


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECCccccccCCCCCchh
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++  +|+||||||+...  .++.+.+.++|++.+++|+.++++++|.++|.|+++ ++|+||+++|..+..  +.|+..+
T Consensus        73 g~--iDilVnnAg~~~~--~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~--~~~~~~~  146 (242)
T d1cyda_          73 GP--VDLLVNNAALVIM--QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV--TFPNLIT  146 (242)
T ss_dssp             CC--CSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS--CCTTBHH
T ss_pred             CC--CeEEEECCccccc--hhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccc--cCCcccc
Confidence            64  6699999998754  679999999999999999999999999999987654 579999999999988  7889999


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      |++||+|+.+|+|+|+.|++++|||||+|+||+++|||.++..
T Consensus       147 Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~  189 (242)
T d1cyda_         147 YSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVS  189 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHT
T ss_pred             ccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhc
Confidence            9999999999999999999999999999999999999987654

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-43  Score=289.78  Aligned_cols=197  Identities=23%  Similarity=0.279  Sum_probs=178.5

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~  128 (255)
                      ++||+||||||++|||+++|++|+++|++|++++|++++++++.+++++.+.+.++..+.||+++  ++++.++.+.+++
T Consensus         8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            78999999999999999999999999999999999999999999999998777789999999998  4577888899989


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC--CcEEEEECCccccccCCCCCch
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK--KGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~--~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      +++|  +||||||...+  .++.+.+.++|++.+++|+.+++++++.++|.|++++  +|+||++||.++....|.+...
T Consensus        88 g~iD--~lVnnAg~~~~--~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~  163 (257)
T d1xg5a_          88 SGVD--ICINNAGLARP--DTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTH  163 (257)
T ss_dssp             CCCS--EEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGH
T ss_pred             CCCC--EEEecccccCC--CccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccH
Confidence            8655  99999998755  6789999999999999999999999999999998765  6999999999987633456677


Q ss_pred             hchHHHHHHHHHHHHHHHHH--ccCCceEEEeeeeeeeeCCcchhhh
Q 025260          207 VYAATKAYIDQFSRSLYVEY--RKSGIDVQCQVLFLLCFYNLNDLVM  251 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~--~~~gi~v~~v~Pg~v~T~~~~~~~~  251 (255)
                      .|++||+|+.+|+++|+.|+  .++||+||+|+||.++|++.....+
T Consensus       164 ~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~  210 (257)
T d1xg5a_         164 FYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHD  210 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTT
T ss_pred             HHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcCh
Confidence            89999999999999999998  6789999999999999999876653

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-43  Score=289.87  Aligned_cols=189  Identities=27%  Similarity=0.328  Sum_probs=167.4

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      ++.++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.      .+..+.+|++|.  +.++++.++
T Consensus         2 ~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~------~~~~~~~Dv~d~--~~v~~~~~~   73 (244)
T d1pr9a_           2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP------GIEPVCVDLGDW--EATERALGS   73 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST------TCEEEECCTTCH--HHHHHHHTT
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC------CCeEEEEeCCCH--HHHHHHHHH
Confidence            356789999999999999999999999999999999999999888776642      356778999975  556677776


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhh-CCCcEEEEECCccccccCCCCCch
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLK-RKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~-~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      +++  +|+||||||+...  .++.+.+.++|++.+++|+.++++++|+++|.|.+ ++.|+||++||.++..  +.|...
T Consensus        74 ~g~--iDilVnnAg~~~~--~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~--~~~~~~  147 (244)
T d1pr9a_          74 VGP--VDLLVNNAAVALL--QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR--AVTNHS  147 (244)
T ss_dssp             CCC--CCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS--CCTTBH
T ss_pred             hCC--ceEEEeccccccc--cchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccc--cccchh
Confidence            764  6699999999754  67999999999999999999999999999997654 5679999999999988  778899


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      +|++||+|+.+|+++|+.|++++|||||+|+||+++|||.+...
T Consensus       148 ~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~  191 (244)
T d1pr9a_         148 VYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATW  191 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTS
T ss_pred             hhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhc
Confidence            99999999999999999999999999999999999999987653

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=5.3e-43  Score=290.54  Aligned_cols=202  Identities=22%  Similarity=0.283  Sum_probs=175.0

Q ss_pred             CCcccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHH
Q 025260           45 PAKNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVE  122 (255)
Q Consensus        45 ~~~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~  122 (255)
                      |..+++++||++|||||++|||+++|++|+++|++|++++|+++++++..+++.+.+ +.++..+.+|+++  ++++.++
T Consensus         1 p~~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~   79 (260)
T d1h5qa_           1 PGFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQ   79 (260)
T ss_dssp             CCEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-CCceEEEEccCCCHHHHHHHHH
Confidence            445678999999999999999999999999999999999999999999998887765 4568889999998  3577778


Q ss_pred             HHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECCccccccC-
Q 025260          123 RIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIVIP-  200 (255)
Q Consensus       123 ~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS~~~~~~~-  200 (255)
                      ++.+.+++  +|+||||||+...  .++.+.+.++|++++++|+.|+++++|.++|+|+++ ..|+|++++|....... 
T Consensus        80 ~~~~~~g~--iDilVnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~  155 (260)
T d1h5qa_          80 QIDADLGP--ISGLIANAGVSVV--KPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQ  155 (260)
T ss_dssp             HHHHHSCS--EEEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCE
T ss_pred             HHHHHhCC--CcEeccccccccc--CCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccc
Confidence            88888774  6699999999754  678999999999999999999999999999998654 56788888887655421 


Q ss_pred             ----CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhhh
Q 025260          201 ----SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLVM  251 (255)
Q Consensus       201 ----~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~  251 (255)
                          +.++..+|++||+|+.+|+|+|+.|++++|||||+|+||+++|||.+...+
T Consensus       156 ~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~  210 (260)
T d1h5qa_         156 SSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDK  210 (260)
T ss_dssp             EETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCH
T ss_pred             cccccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCH
Confidence                235678999999999999999999999999999999999999999877643

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-43  Score=289.98  Aligned_cols=186  Identities=25%  Similarity=0.335  Sum_probs=168.4

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHhc
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAIE  129 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~  129 (255)
                      +||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..++.++..+.+|++|  ++++.++++.+.++
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            5999999999999999999999999999999999999999999999887777789999999998  45788888888888


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC---CcEEEEECCccccccCCCCCch
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK---KGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~---~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      ++|  +||||||+...          ++|++.+++|+.+++++++.++|+|.+++   .|+||++||.++..  +.|+..
T Consensus        82 ~iD--ilVnnAg~~~~----------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~--~~~~~~  147 (254)
T d2gdza1          82 RLD--ILVNNAGVNNE----------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM--PVAQQP  147 (254)
T ss_dssp             CCC--EEEECCCCCCS----------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS--CCTTCH
T ss_pred             CcC--eeccccccccc----------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhcc--CCCCcc
Confidence            654  99999998633          24789999999999999999999998764   48899999999988  788999


Q ss_pred             hchHHHHHHHHHHHH--HHHHHccCCceEEEeeeeeeeeCCcchhhh
Q 025260          207 VYAATKAYIDQFSRS--LYVEYRKSGIDVQCQVLFLLCFYNLNDLVM  251 (255)
Q Consensus       207 ~Y~asK~al~~~~~~--l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~  251 (255)
                      +|++||+|+.+|+|+  |+.|++++|||||+|+||+|+|||++++..
T Consensus       148 ~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~  194 (254)
T d2gdza1         148 VYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEK  194 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGC
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccc
Confidence            999999999999997  788999999999999999999999887653

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-42  Score=291.72  Aligned_cols=194  Identities=24%  Similarity=0.340  Sum_probs=173.5

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcC---CceEEEEEEECCC--CcHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYA---KTQIKSVVVDFSG--DLDEGVERI  124 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~--~~~~~~~~~  124 (255)
                      .++||+||||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+   +.++..+.+|++|  ++++.++++
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            36799999999999999999999999999999999999999999999986532   4578999999998  457788888


Q ss_pred             HHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          125 KEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                      .+.++++  |+||||||+...  .++.+.+.++|++.+++|+.|+++++|+++|.|++++.|+||++||. +..  +.|.
T Consensus        89 ~~~~G~i--DiLVnnAg~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~-~~~--~~~~  161 (297)
T d1yxma1          89 LDTFGKI--NFLVNNGGGQFL--SPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVP-TKA--GFPL  161 (297)
T ss_dssp             HHHHSCC--CEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCC-CTT--CCTT
T ss_pred             HHHhCCe--EEEEeecccccc--CchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccc-ccc--cccc
Confidence            8888864  599999998754  67899999999999999999999999999999999999999999764 444  5688


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      ..+|++||+|+.+|+|+|+.|++++||+||+|+||+|+|++..+..
T Consensus       162 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  207 (297)
T d1yxma1         162 AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENY  207 (297)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTS
T ss_pred             cccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhc
Confidence            8999999999999999999999999999999999999999975443

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.1e-42  Score=294.00  Aligned_cols=192  Identities=22%  Similarity=0.283  Sum_probs=167.6

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCC---------hhhHHHHHHHHHhhcCCceEEEEEEECCC--C
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN---------PDKLKDVSDSIQAKYAKTQIKSVVVDFSG--D  116 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~---------~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~  116 (255)
                      +++++||++|||||++|||+++|++|+++|++|++.+|+         .+.+++..+++...+     ....+|+.+  +
T Consensus         2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~d~~~~~~   76 (302)
T d1gz6a_           2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG-----GKAVANYDSVEA   76 (302)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT-----CEEEEECCCGGG
T ss_pred             CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcc-----cccccccchHHH
Confidence            467889999999999999999999999999999999765         445667777776543     234556655  4


Q ss_pred             cHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccc
Q 025260          117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA  196 (255)
Q Consensus       117 ~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~  196 (255)
                      .++.++.+.+.++++  |+||||||+..+  .++.+.+.++|++++++|+.|+++++|+++|+|++++.|+||++||.++
T Consensus        77 ~~~~v~~~~~~~G~i--DiLVnNAGi~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~  152 (302)
T d1gz6a_          77 GEKLVKTALDTFGRI--DVVVNNAGILRD--RSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASG  152 (302)
T ss_dssp             HHHHHHHHHHHTSCC--CEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             HHHHHHHHHHHcCCC--CEEEECCccCCC--CChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhh
Confidence            577888888888865  599999999765  6799999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          197 IVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       197 ~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      ..  +.++..+|++||+|+.+|+++|+.|++++||+||+|+||++.|++.....
T Consensus       153 ~~--~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~  204 (302)
T d1gz6a_         153 IY--GNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMP  204 (302)
T ss_dssp             HH--CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSC
T ss_pred             cC--CCCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCc
Confidence            98  78899999999999999999999999999999999999999888765543

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.4e-42  Score=287.97  Aligned_cols=196  Identities=21%  Similarity=0.228  Sum_probs=172.9

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHH---cCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAK---TGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIK  125 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~---~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~  125 (255)
                      ++||+++||||++|||+++|++|++   +|++|++++|++++++++.+++.+.+++.++..+.||+++.  +++.++.+.
T Consensus         4 L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~   83 (259)
T d1oaaa_           4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            6699999999999999999999996   79999999999999999999999988888999999999984  345555555


Q ss_pred             HHh--cCCCccEEEEecCCCCC-cccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC--CcEEEEECCccccccC
Q 025260          126 EAI--EGLDVGVLINNVGISYP-YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK--KGAIVNIGSGAAIVIP  200 (255)
Q Consensus       126 ~~~--~~~~id~lv~nag~~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~--~g~iv~vsS~~~~~~~  200 (255)
                      +..  ...++|++|||||...+ ...++.+.+.++|++++++|+.++++++|+++|+|++++  .|+||++||.++..  
T Consensus        84 ~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~--  161 (259)
T d1oaaa_          84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ--  161 (259)
T ss_dssp             HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS--
T ss_pred             HhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC--
Confidence            432  23468899999998643 235688999999999999999999999999999998765  58999999999988  


Q ss_pred             CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          201 SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       201 ~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      +.|++..|++||+|+.+|+++|+.|  .+||+||+|+||+|.|+|.+...
T Consensus       162 ~~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~  209 (259)
T d1oaaa_         162 PYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLAR  209 (259)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHH
T ss_pred             CCccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhh
Confidence            7899999999999999999999999  57999999999999999987654

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=4.3e-42  Score=287.29  Aligned_cols=190  Identities=19%  Similarity=0.254  Sum_probs=164.8

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      |+++||+++||||++|||+++|++|+++|++|++++|+++++++..+++     +.++..+.+|+++  ++++.++++.+
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~   75 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-----GDNVLGIVGDVRSLEDQKQAASRCVA   75 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeeEEecccccHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999888877665     3468889999997  45778888888


Q ss_pred             HhcCCCccEEEEecCCCCCcc---cccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC
Q 025260          127 AIEGLDVGVLINNVGISYPYA---RFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP  203 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~  203 (255)
                      .++++|  ++|||||+.....   ....+.+++.|++++++|+.|+++++|+++|+|++++ |+||+++|..+..  +.|
T Consensus        76 ~~g~id--ilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~--~~~  150 (276)
T d1bdba_          76 RFGKID--TLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFY--PNG  150 (276)
T ss_dssp             HHSCCC--EEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTS--TTS
T ss_pred             HhCCcc--cccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhcc--CCC
Confidence            888655  9999999864321   1234455667999999999999999999999998764 8999999999888  778


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      +..+|++||+|+.+|+|+|+.|+++ +||||+|+||+|+|||....
T Consensus       151 ~~~~Y~asKaal~~ltr~lA~ela~-~IrVN~I~PG~i~T~~~~~~  195 (276)
T d1bdba_         151 GGPLYTAAKHAIVGLVRELAFELAP-YVRVNGVGSGGINSDLRGPS  195 (276)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECCCCSCCCCCG
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhc-ceEEcccCCCCEecCcCCcc
Confidence            9999999999999999999999987 59999999999999997654

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=2.5e-42  Score=285.31  Aligned_cols=186  Identities=22%  Similarity=0.214  Sum_probs=163.4

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC---cHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD---LDEGVERIK  125 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~  125 (255)
                      ++++||+||||||++|||+++|++|+++|++|++++|+.++.++ .+++.+..++.++..+.+|++++   ++++++++.
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   79 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTA-LAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHH-HHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHH-HHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999988877554 45566666678899999999843   467788888


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC---CcEEEEECCccccccCCC
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK---KGAIVNIGSGAAIVIPSD  202 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~---~g~iv~vsS~~~~~~~~~  202 (255)
                      +++++  +|+||||||..          +++.|++++++|+.|+++++++++|+|.+++   .|+||++||..+..  +.
T Consensus        80 ~~~g~--iDilvnnAG~~----------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~--~~  145 (254)
T d1sbya1          80 DQLKT--VDILINGAGIL----------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN--AI  145 (254)
T ss_dssp             HHHSC--CCEEEECCCCC----------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS--CC
T ss_pred             HHcCC--CCEEEeCCCCC----------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhcc--CC
Confidence            88885  55999999964          3456899999999999999999999997753   58999999999988  78


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ++..+|++||+|+.+|+++|+.|+.++||+||+|+||+|+|||.+.+
T Consensus       146 ~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~  192 (254)
T d1sbya1         146 HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTF  192 (254)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCcccccc
Confidence            89999999999999999999999999999999999999999987654

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=8e-42  Score=279.16  Aligned_cols=179  Identities=25%  Similarity=0.309  Sum_probs=158.9

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      ++||++|||||++|||+++|++|+++|++|++++|+++.+++.         ..  ..+.+|++++    ++.+.+++++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~---------~~--~~~~~Dv~~~----~~~~~~~~g~   66 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS---------GH--RYVVCDLRKD----LDLLFEKVKE   66 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT---------CS--EEEECCTTTC----HHHHHHHSCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc---------CC--cEEEcchHHH----HHHHHHHhCC
Confidence            5799999999999999999999999999999999998765432         22  3467888865    4556677775


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchH
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA  210 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~a  210 (255)
                        +|+||||||+...  .++.+.+.++|++.+++|+.++++++|+++|+|++++.|+||+++|..+..  +.+....|++
T Consensus        67 --iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~--~~~~~~~Y~a  140 (234)
T d1o5ia_          67 --VDILVLNAGGPKA--GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS--PIENLYTSNS  140 (234)
T ss_dssp             --CSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--CCTTBHHHHH
T ss_pred             --CcEEEecccccCC--cchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccc--cccccccchh
Confidence              5599999998654  678999999999999999999999999999999999999999999999888  7788999999


Q ss_pred             HHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          211 TKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       211 sK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      ||+|+.+|+|+++.|++++|||||+|+||+++|++.++..
T Consensus       141 sKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~  180 (234)
T d1o5ia_         141 ARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELL  180 (234)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhc
Confidence            9999999999999999999999999999999999987654

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-42  Score=286.80  Aligned_cols=192  Identities=22%  Similarity=0.296  Sum_probs=158.3

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEE---EeCChhhHHHHHHHHHhh-cCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVL---VGRNPDKLKDVSDSIQAK-YAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l---~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      .|+|||||||+|||+++|++|+++|++|++   ++|+.+..++..+..++. ..+.++..+.+|++|.  +.++++.+..
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~--~~~~~~~~~~   79 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDS--KSVAAARERV   79 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCH--HHHHHHHHTC
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccch--Hhhhhhhhhc
Confidence            589999999999999999999999998554   456655555444444432 2356799999999985  4444555444


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      ....+|++|||||....  .++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..  +.|+.++|
T Consensus        80 ~~g~idilvnnag~~~~--~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~--~~~~~~~Y  155 (285)
T d1jtva_          80 TEGRVDVLVCNAGLGLL--GPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM--GLPFNDVY  155 (285)
T ss_dssp             TTSCCSEEEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTS--CCTTCHHH
T ss_pred             cccchhhhhhccccccc--ccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcC--CCCCchHH
Confidence            33468899999999865  668899999999999999999999999999999999999999999999998  78999999


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      ++||+|+.+|+++|+.|++++||+||+|+||+|+|+|+++..
T Consensus       156 ~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~  197 (285)
T d1jtva_         156 CASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVL  197 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhc
Confidence            999999999999999999999999999999999999997654

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=1.6e-41  Score=280.31  Aligned_cols=183  Identities=18%  Similarity=0.105  Sum_probs=162.1

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHhcCCC
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAIEGLD  132 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~  132 (255)
                      ++|||||++|||+++|++|+++|++|++++|+.+.++++.+.. ..+.       .+|+++  ++++.++++.++++++|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~-~~~~-------~~dv~~~~~~~~~~~~~~~~~G~iD   73 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA-ETYP-------QLKPMSEQEPAELIEAVTSAYGQVD   73 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHH-HHCT-------TSEECCCCSHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhh-CcEE-------EeccCCHHHHHHHHHHHHHHcCCCC
Confidence            7999999999999999999999999999999998887765433 3222       245544  67888899999998655


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHHH
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATK  212 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~asK  212 (255)
                        +||||||+... ..++.+.+.++|++.+++|+.++++++|+++|+|++++.|+||++||.++..  +.++..+|++||
T Consensus        74 --iLVnNAg~~~~-~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~--~~~~~~~Y~asK  148 (252)
T d1zmta1          74 --VLVSNDIFAPE-FQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFG--PWKELSTYTSAR  148 (252)
T ss_dssp             --EEEEECCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTS--CCTTCHHHHHHH
T ss_pred             --EEEECCcCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccc--cccccccccccc
Confidence              99999998643 3578899999999999999999999999999999999999999999999988  788899999999


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          213 AYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       213 ~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      +|+.+|+|+|+.|++++|||||+|+||+++|+|.+.+.
T Consensus       149 aal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~  186 (252)
T d1zmta1         149 AGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFY  186 (252)
T ss_dssp             HHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSC
T ss_pred             ccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhh
Confidence            99999999999999999999999999999999987653

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-41  Score=279.94  Aligned_cols=190  Identities=24%  Similarity=0.296  Sum_probs=167.8

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      ++||+++|||||+|||+++|++|+++|++|++++|++++++++.+++.+.. ......+.+|.++.  .....+.+.+.+
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhh-cccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            789999999999999999999999999999999999999999999887765 45677888888763  344556666667


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      +.  +|+++||||....  .++.+.+.++|++++++|+.|++.+++.++|+|++ ++|+||++||.++..  +.|+..+|
T Consensus        91 g~--~~~li~nag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~-~~G~ii~isS~~~~~--~~p~~~~Y  163 (269)
T d1xu9a_          91 GG--LDMLILNHITNTS--LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQ-SNGSIVVVSSLAGKV--AYPMVAAY  163 (269)
T ss_dssp             TS--CSEEEECCCCCCC--CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEEEGGGTS--CCTTCHHH
T ss_pred             CC--ccccccccccccc--cccccCCHHHhhhheeeehhhHHHHHHHHHHHHHh-cCCcceEeccchhcC--CCCCchHH
Confidence            75  4599999998754  56888999999999999999999999999999964 569999999999988  88999999


Q ss_pred             hHHHHHHHHHHHHHHHHHcc--CCceEEEeeeeeeeeCCcch
Q 025260          209 AATKAYIDQFSRSLYVEYRK--SGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~--~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      ++||+|+.+|+++|+.|+++  .||+||+|+||+|+|+|.++
T Consensus       164 ~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~  205 (269)
T d1xu9a_         164 SASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMK  205 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHH
Confidence            99999999999999999974  57999999999999998754

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=8.5e-41  Score=277.08  Aligned_cols=193  Identities=23%  Similarity=0.282  Sum_probs=167.7

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEe-CChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG-RNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      +++||+||||||++|||+++|++|+++|++|++++ |+++.++++.+++++.+  .++..+.+|++|  ++++.++++.+
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g--~~~~~~~~D~~~~~~v~~~~~~~~~   80 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG--AQGVAIQADISKPSEVVALFDKAVS   80 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcC--CCceEecCCCCCHHHHHHHHHHHHH
Confidence            36799999999999999999999999999999865 56666788888887764  467889999997  45777888888


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      +++.  +|++|||||....  .++.+.+.++|++.+++|+.++++++|.++|+|++  +|++++++|..+... +.|...
T Consensus        81 ~~g~--idilinnag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~~iii~s~~~~~~-~~~~~~  153 (259)
T d1ja9a_          81 HFGG--LDFVMSNSGMEVW--CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR--GGRIILTSSIAAVMT-GIPNHA  153 (259)
T ss_dssp             HHSC--EEEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE--EEEEEEECCGGGTCC-SCCSCH
T ss_pred             HcCC--CcEEEeccccccc--cccccchHHHHHHHHhhccceeeeehhhhhhhhhc--CCccccccccccccc-CCCCch
Confidence            8885  6699999999754  66889999999999999999999999999999965  477888877666542 578899


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhhh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLVM  251 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~  251 (255)
                      .|++||+|+.+|+|+|++|++++|||||+|+||+++|||.++...
T Consensus       154 ~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~  198 (259)
T d1ja9a_         154 LYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSW  198 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhh
Confidence            999999999999999999999999999999999999999876543

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=1.4e-40  Score=274.14  Aligned_cols=193  Identities=21%  Similarity=0.221  Sum_probs=162.6

Q ss_pred             cEEEEECCCCchHHHHHHHHH---HcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHHh
Q 025260           54 SWALVTGPTDGIGKSFAFQLA---KTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEAI  128 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la---~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~  128 (255)
                      |+||||||++|||+++|++|+   ++|++|++++|++++++++.+ +.+.  ..++..+.+|++|.  ++++++.+++..
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~-~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   79 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKN--HSNIHILEIDLRNFDAYDKLVADIEGVT   79 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHHH--CTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHhc--CCcEEEEEEEeccHHHHHHHHhhhHHHh
Confidence            789999999999999999996   579999999999999887654 3333  34678899999973  566777776543


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-----------CCcEEEEECCcccc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-----------KKGAIVNIGSGAAI  197 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-----------~~g~iv~vsS~~~~  197 (255)
                      +...+|+||||||+... ..++.+.+.++|++++++|+.|++.+++.++|+|+++           .+|++|+++|..+.
T Consensus        80 ~~~~iDiLvnNAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~  158 (248)
T d1snya_          80 KDQGLNVLFNNAGIAPK-SARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS  158 (248)
T ss_dssp             GGGCCSEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC
T ss_pred             hcCCcceEEeecccccc-CcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc
Confidence            33357799999998654 3457789999999999999999999999999999864           36899999998876


Q ss_pred             cc-CCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          198 VI-PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       198 ~~-~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      .. ++.++..+|++||+|+.+|+++++.|++++||+||+|+||+|+|+|.++..
T Consensus       159 ~~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~  212 (248)
T d1snya_         159 IQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSA  212 (248)
T ss_dssp             STTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTC
T ss_pred             cCCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccC
Confidence            52 345677899999999999999999999999999999999999999987653

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=4.4e-40  Score=274.67  Aligned_cols=196  Identities=19%  Similarity=0.261  Sum_probs=170.7

Q ss_pred             cccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCC-hhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHH
Q 025260           47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN-PDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVER  123 (255)
Q Consensus        47 ~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~  123 (255)
                      ...+++||++|||||++|||+++|++|+++|++|++++|+ ++.++++.+++++.+  .++..+.+|+++  ++++.+++
T Consensus        12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g--~~~~~~~~D~~~~~~v~~~~~~   89 (272)
T d1g0oa_          12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG--SDAACVKANVGVVEDIVRMFEE   89 (272)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhC--CceeeEeCCCCCHHHHHHHHHH
Confidence            4455889999999999999999999999999999999876 566777888887763  467889999998  46778888


Q ss_pred             HHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC
Q 025260          124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP  203 (255)
Q Consensus       124 ~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~  203 (255)
                      +.+.++++  |++|||+|....  .++.+.+.++|++.+++|+.+++.++|+++|+|++  +|++++++|..+... +.+
T Consensus        90 ~~~~~g~i--dilV~nag~~~~--~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~--~g~~i~i~s~~~~~~-~~~  162 (272)
T d1g0oa_          90 AVKIFGKL--DIVCSNSGVVSF--GHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI--GGRLILMGSITGQAK-AVP  162 (272)
T ss_dssp             HHHHHSCC--CEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT--TCEEEEECCGGGTCS-SCS
T ss_pred             HHHHhCCC--Cccccccccchh--hhhhhhhhhHHHHHhhhccceeeeecccccccccc--ccccccccccccccc-ccc
Confidence            88888864  599999998754  56889999999999999999999999999999965  478999988776542 467


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhhh
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLVM  251 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~  251 (255)
                      ....|++||+|+.+|+++|+.|++++|||||+|+||+++|+|.+++..
T Consensus       163 ~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~  210 (272)
T d1g0oa_         163 KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCR  210 (272)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGG
T ss_pred             chhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHH
Confidence            788999999999999999999999999999999999999999877653

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=6.6e-41  Score=274.76  Aligned_cols=187  Identities=23%  Similarity=0.267  Sum_probs=159.3

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~  127 (255)
                      +++||+||||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++..+.+|+++  ++++.++++.+.
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~i~~~~~~i~~~   76 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAVEAVFAEALEE   76 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            367999999999999999999999999999999999998887665544     4567889999997  457778888888


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      ++++  |+||||||....  .++.+.+.++|++++++|+.+++.++|+++|+|.++  +.++++||.+..   +.|++.+
T Consensus        77 ~g~i--DiLinnAg~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~--~~i~~~ss~a~~---~~~~~~~  147 (241)
T d2a4ka1          77 FGRL--HGVAHFAGVAHS--ALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG--GSLVLTGSVAGL---GAFGLAH  147 (241)
T ss_dssp             HSCC--CEEEEGGGGTTT--TC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT--CEEEEECCCTTC---CHHHHHH
T ss_pred             hCCc--cEeccccccccc--cchhhhhccccccccccccccccccccccccccccc--cceeeccccccc---cccCccc
Confidence            8865  499999998754  679999999999999999999999999999988543  567777766544   3477899


Q ss_pred             chHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          208 YAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       208 Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      |+++|+|+++|+++|++|+.++||+||+|+||+++|+|.+.+.
T Consensus       148 Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~  190 (241)
T d2a4ka1         148 YAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLP  190 (241)
T ss_dssp             HHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSC
T ss_pred             cchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhh
Confidence            9999999999999999999999999999999999999987654

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-40  Score=273.18  Aligned_cols=187  Identities=23%  Similarity=0.346  Sum_probs=162.6

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      ++||++|||||++|||+++|++|+++|++|++++|+++++++..++       ..+....+|+.+  ++.++...+.+++
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~-------~~~~~~~~d~~~--~~~~~~~~~~~~~   74 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKY-------PGIQTRVLDVTK--KKQIDQFANEVER   74 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGS-------TTEEEEECCTTC--HHHHHHHHHHCSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc-------cCCceeeeeccc--ccccccccccccc
Confidence            7799999999999999999999999999999999998877654332       234555666553  4677777777775


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchH
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA  210 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~a  210 (255)
                        +|+||||||....  .++.+.+.++|++.+++|+.+++.++|.++|+|.+++.|+||++||..+.. ++.+...+|++
T Consensus        75 --id~lVn~ag~~~~--~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~-~~~~~~~~Y~~  149 (245)
T d2ag5a1          75 --LDVLFNVAGFVHH--GTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSV-KGVVNRCVYST  149 (245)
T ss_dssp             --CSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTT-BCCTTBHHHHH
T ss_pred             --ceeEEecccccCC--CChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhcc-CCccchhHHHH
Confidence              5599999998765  668999999999999999999999999999999999999999999987753 25688899999


Q ss_pred             HHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhhh
Q 025260          211 TKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLVM  251 (255)
Q Consensus       211 sK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~  251 (255)
                      ||+|+++|+|+|+.|++++|||||+|+||+++||+.++..+
T Consensus       150 sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~  190 (245)
T d2ag5a1         150 TKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQ  190 (245)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhh
Confidence            99999999999999999999999999999999999876544

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=5.4e-40  Score=271.82  Aligned_cols=194  Identities=19%  Similarity=0.185  Sum_probs=158.9

Q ss_pred             ccccCCcEEEEECCCC--chHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHH
Q 025260           48 NLRKYGSWALVTGPTD--GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVER  123 (255)
Q Consensus        48 ~~~~~gk~vlITGas~--gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~  123 (255)
                      .++++||+++||||+|  |||+++|++|+++|++|++++|+++..++..+. .+..  .....+.+|++|  ++++.+++
T Consensus         3 ~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~-~~~~--~~~~~~~~D~~~~~~v~~~~~~   79 (256)
T d1ulua_           3 TVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKL-AEAL--GGALLFRADVTQDEELDALFAG   79 (256)
T ss_dssp             EECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH-HHHT--TCCEEEECCTTCHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHh-hhcc--CcccccccccCCHHHHHHHHHH
Confidence            4578899999999987  999999999999999999999997665554443 3332  245678999997  45777888


Q ss_pred             HHHHhcCCCccEEEEecCCCCC--cccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCC
Q 025260          124 IKEAIEGLDVGVLINNVGISYP--YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS  201 (255)
Q Consensus       124 ~~~~~~~~~id~lv~nag~~~~--~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~  201 (255)
                      +.+.+++  +|+||||||....  ...++.+.+.++|++.+++|+.+++.++|.++|+|++  +|+||++||..+..  +
T Consensus        80 ~~~~~g~--iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~Iv~isS~~~~~--~  153 (256)
T d1ulua_          80 VKEAFGG--LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEK--V  153 (256)
T ss_dssp             HHHHHSS--EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTS--B
T ss_pred             HHHhcCC--ceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc--CCEEEEEeehHhcC--C
Confidence            8888885  6699999998643  1234678899999999999999999999999998854  48999999999988  7


Q ss_pred             CCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          202 DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       202 ~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      .|+..+|++||+|+.+|+++|+.|++++|||||+|+||+++|++.+...
T Consensus       154 ~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~  202 (256)
T d1ulua_         154 VPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP  202 (256)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchh
Confidence            7899999999999999999999999999999999999999999887654

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-40  Score=276.14  Aligned_cols=189  Identities=21%  Similarity=0.207  Sum_probs=161.8

Q ss_pred             cEEEEECCCCchHHHHHHHHHHc-CCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHhcC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAIEG  130 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~-G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~  130 (255)
                      +++|||||++|||+++|++|+++ |++|++++|++++++++.+++++.++  ++..+.||++|  +++++++++.+.+++
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL--SPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTC--CCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            56699999999999999999986 89999999999999999999988754  45778899998  568888999998885


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc-----------
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI-----------  199 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~-----------  199 (255)
                        +|+||||||+..+  .+..+.+.++|+++|++|++|++++++.++|+|++  +|+||++||..+...           
T Consensus        82 --iDiLVnNAGi~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~g~ivnisS~~~~~~~~~~~~y~~~k  155 (275)
T d1wmaa1          82 --LDVLVNNAGIAFK--VADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQK  155 (275)
T ss_dssp             --EEEEEECCCCCCC--TTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHH
T ss_pred             --cEEEEEcCCcCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcccccccceeccccccchhhhhh
Confidence              6699999999765  55677888999999999999999999999999954  499999999766431           


Q ss_pred             ----------------------------CCCCCchhchHHHHHHHHHHHHHHHHHcc----CCceEEEeeeeeeeeCCcc
Q 025260          200 ----------------------------PSDPLYSVYAATKAYIDQFSRSLYVEYRK----SGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       200 ----------------------------~~~~~~~~Y~asK~al~~~~~~l~~e~~~----~gi~v~~v~Pg~v~T~~~~  247 (255)
                                                  .+..+...|++||+|+.+|++.+++|+.+    .||+||+++||+|+|+|.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~  235 (275)
T d1wmaa1         156 FRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG  235 (275)
T ss_dssp             HHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTC
T ss_pred             hcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCccc
Confidence                                        01122357999999999999999999965    4899999999999999987


Q ss_pred             hhh
Q 025260          248 DLV  250 (255)
Q Consensus       248 ~~~  250 (255)
                      ...
T Consensus       236 ~~~  238 (275)
T d1wmaa1         236 PKA  238 (275)
T ss_dssp             TTC
T ss_pred             Ccc
Confidence            653

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-39  Score=264.57  Aligned_cols=193  Identities=21%  Similarity=0.201  Sum_probs=161.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++||++|||||++|||+++|++|+++|++|++++|+++++++..+++     +.......+|..+.  +++..+.+...
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAKGK   76 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCCcccccccccccccccccccccccc
Confidence            467999999999999999999999999999999999999999888877     34567778888763  35555666666


Q ss_pred             hcCCCccEEEEecCCCCCc----ccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC------CCcEEEEECCcccc
Q 025260          128 IEGLDVGVLINNVGISYPY----ARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR------KKGAIVNIGSGAAI  197 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~------~~g~iv~vsS~~~~  197 (255)
                      ....|  .+++|+++....    ..++.+.+.++|++++++|+.++++++|+++|+|.++      ++|+||++||..+.
T Consensus        77 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~  154 (248)
T d2o23a1          77 FGRVD--VAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAF  154 (248)
T ss_dssp             HSCCC--EEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHH
T ss_pred             ccccc--ccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhc
Confidence            66544  888888875432    2346678899999999999999999999999998654      56899999999998


Q ss_pred             ccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhhh
Q 025260          198 VIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLVM  251 (255)
Q Consensus       198 ~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~  251 (255)
                      .  +.|+..+|++||+|+.+|+|+|+.|++++||+||+|+||+++|+|.+++.+
T Consensus       155 ~--~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~  206 (248)
T d2o23a1         155 E--GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE  206 (248)
T ss_dssp             H--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------
T ss_pred             c--CCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCH
Confidence            8  789999999999999999999999999999999999999999999887654

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.5e-39  Score=268.25  Aligned_cols=191  Identities=21%  Similarity=0.276  Sum_probs=155.3

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHh
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAI  128 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~  128 (255)
                      .|+||||||++|||+++|++|+++|+  +|++.+|++++++++.+    .. +.++.++.+|+++  +++++++++.+.+
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~----~~-~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   77 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----IK-DSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----CC-CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH----hh-CCceEEEEEecCCHHHHHHHHHHHHHHh
Confidence            69999999999999999999999996  68999999988776543    22 4568899999997  4577888888888


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-----------CcEEEEECCcccc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-----------KGAIVNIGSGAAI  197 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-----------~g~iv~vsS~~~~  197 (255)
                      +..++|+||||||+..+ ..++.+.+.++|++++++|+.|++++++.++|+|++++           .+++++++|..+.
T Consensus        78 ~~~~idilinnAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~  156 (250)
T d1yo6a1          78 GSDGLSLLINNAGVLLS-YGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS  156 (250)
T ss_dssp             GGGCCCEEEECCCCCCC-BCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred             CCCCeEEEEEcCcccCC-CCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccc
Confidence            87678899999998754 24577889999999999999999999999999997642           4789999987665


Q ss_pred             ccC-----CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchh
Q 025260          198 VIP-----SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       198 ~~~-----~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      ...     +..+..+|++||+|+.+|+++|+.|++++||+||+|+||+|+|+|.++.
T Consensus       157 ~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~  213 (250)
T d1yo6a1         157 ITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN  213 (250)
T ss_dssp             STTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------
T ss_pred             ccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCC
Confidence            521     1223457999999999999999999999999999999999999997653

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=6.4e-38  Score=264.25  Aligned_cols=194  Identities=20%  Similarity=0.238  Sum_probs=166.3

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKEA  127 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~  127 (255)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+ +.+...+.+|+++.  +++.++.+.+.
T Consensus        22 ~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~-g~~~~~~~~D~~~~~~v~~~~~~~~~~  100 (294)
T d1w6ua_          22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSELIKV  100 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhc-CCceEEEEecccChHHHHHHhhhhhhh
Confidence            6889999999999999999999999999999999999999999999988776 45678899999973  45666777777


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECCccccccCCCCCch
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      +++  +|+||||||....  .++.+.+.+++++.+.+|+.+.+.+.+...+.+... ..+.+++++|..+..  +.++..
T Consensus       101 ~g~--iDilvnnAg~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~--~~~~~~  174 (294)
T d1w6ua_         101 AGH--PNIVINNAAGNFI--SPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET--GSGFVV  174 (294)
T ss_dssp             TCS--CSEEEECCCCCCC--SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH--CCTTCH
T ss_pred             ccc--cchhhhhhhhccc--cccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhh--cccccc
Confidence            775  5599999998765  568889999999999999999999998888777654 467788899988888  678899


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      +|++||+|+.+|+|+|+.|++++|||||+|+||+|+|++..+..
T Consensus       175 ~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~  218 (294)
T d1w6ua_         175 PSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRL  218 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------C
T ss_pred             hHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhcc
Confidence            99999999999999999999999999999999999999986653

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.7e-38  Score=256.13  Aligned_cols=181  Identities=13%  Similarity=0.027  Sum_probs=151.0

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHhc
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAIE  129 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~  129 (255)
                      +||+||||||++|||+++|++|+++|++|+++++++.+.            ........+|..+  +.+...+.+.+.++
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE------------ASASVIVKMTDSFTEQADQVTAEVGKLLG   68 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT------------SSEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccccceeecccCcHHHHHHHHHHHHHHhC
Confidence            589999999999999999999999999999999876531            2233344444443  23445566666666


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhch
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYA  209 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~  209 (255)
                      ..++|+||||||.... ..+..+.+.++|++++++|+.+++++++.++|+|++  +|+||++||.++..  +.|+..+|+
T Consensus        69 ~~~iD~lInnAG~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~--~~~~~~~Y~  143 (236)
T d1dhra_          69 DQKVDAILCVAGGWAG-GNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALD--GTPGMIGYG  143 (236)
T ss_dssp             TCCEEEEEECCCCCCC-BCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGS--CCTTBHHHH
T ss_pred             CCCceEEEECCccccc-ccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc--ccceeEEccHHHcC--CccCCcccH
Confidence            6679999999997543 244667778899999999999999999999999954  59999999999988  789999999


Q ss_pred             HHHHHHHHHHHHHHHHHc--cCCceEEEeeeeeeeeCCcchh
Q 025260          210 ATKAYIDQFSRSLYVEYR--KSGIDVQCQVLFLLCFYNLNDL  249 (255)
Q Consensus       210 asK~al~~~~~~l~~e~~--~~gi~v~~v~Pg~v~T~~~~~~  249 (255)
                      +||+|+.+|+++|+.|++  ++||+||+|+||+++|||.+..
T Consensus       144 asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~  185 (236)
T d1dhra_         144 MAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKS  185 (236)
T ss_dssp             HHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhh
Confidence            999999999999999998  5799999999999999997654

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=6.2e-37  Score=250.20  Aligned_cols=181  Identities=14%  Similarity=0.050  Sum_probs=146.7

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~  130 (255)
                      ++.||||||++|||+++|++|+++|++|++++|++++.            ........+|..+  +.+...+.+.+.+..
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ------------ADSNILVDGNKNWTEQEQSILEQTASSLQG   69 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT------------SSEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc------------ccccceeccccCchhHHHHHHHHHHHHhcC
Confidence            34579999999999999999999999999999987642            1122333334332  334445666666655


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchH
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA  210 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~a  210 (255)
                      ..+|+||||||+.... .+..+.+.+.|+.++++|+.+++.++|+++|+|++  +|+||++||..+..  +.|+..+|++
T Consensus        70 g~iD~linnAG~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~Iv~isS~~~~~--~~~~~~~Y~a  144 (235)
T d1ooea_          70 SQVDGVFCVAGGWAGG-SASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMG--PTPSMIGYGM  144 (235)
T ss_dssp             CCEEEEEECCCCCCCB-CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGS--CCTTBHHHHH
T ss_pred             CCeeEEEECCcccccc-cccccCcHHHHhhHhhhHHHHHHHHhhhccccccc--ceEEEEeccHHhcC--CcccccchHH
Confidence            5788999999986532 33555566889999999999999999999999954  49999999999988  7899999999


Q ss_pred             HHHHHHHHHHHHHHHHc--cCCceEEEeeeeeeeeCCcchhh
Q 025260          211 TKAYIDQFSRSLYVEYR--KSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       211 sK~al~~~~~~l~~e~~--~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      ||+|+.+|+++|+.|++  +.||+||+|+||+++|+|.++..
T Consensus       145 sKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~  186 (235)
T d1ooea_         145 AKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWM  186 (235)
T ss_dssp             HHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhC
Confidence            99999999999999998  47899999999999999987654

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=6.8e-34  Score=243.01  Aligned_cols=190  Identities=12%  Similarity=0.092  Sum_probs=153.5

Q ss_pred             CcEEEEEC--CCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCC----------ceEEEEEEEC-------
Q 025260           53 GSWALVTG--PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAK----------TQIKSVVVDF-------  113 (255)
Q Consensus        53 gk~vlITG--as~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~----------~~~~~~~~d~-------  113 (255)
                      +|++||||  +++|||+++|++|+++|++|++++++............+....          .......+|.       
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            79999999  5689999999999999999999999877655444433222111          1122333332       


Q ss_pred             -------------CC--CcHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhh
Q 025260          114 -------------SG--DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLP  178 (255)
Q Consensus       114 -------------~~--~~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp  178 (255)
                                   .+  ++++.++.+.+.+++  +|+||||||......+++.+.+.++|++.|++|+.+.+.++|+++|
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~--iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~  159 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGK--INMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN  159 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCC--EEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCC--CCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHh
Confidence                         22  357788899999985  5599999998765446788999999999999999999999999999


Q ss_pred             hhhhCCCcEEEEECCccccccCCCCC-chhchHHHHHHHHHHHHHHHHHcc-CCceEEEeeeeeeeeCCcch
Q 025260          179 GMLKRKKGAIVNIGSGAAIVIPSDPL-YSVYAATKAYIDQFSRSLYVEYRK-SGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       179 ~~~~~~~g~iv~vsS~~~~~~~~~~~-~~~Y~asK~al~~~~~~l~~e~~~-~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      +|.+  +|+||++||.++..  +.|. ...|++||+|+++|+|+|+.|+++ +|||||+|+||+|+|++.+.
T Consensus       160 ~m~~--~GsIv~iss~~~~~--~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~  227 (329)
T d1uh5a_         160 IMKP--QSSIISLTYHASQK--VVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATA  227 (329)
T ss_dssp             GEEE--EEEEEEEECGGGTS--CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGG
T ss_pred             hccc--ccccccceeehhcc--cccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhc
Confidence            9954  58999999998887  6665 467999999999999999999986 69999999999999976554

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=6.5e-34  Score=232.55  Aligned_cols=180  Identities=22%  Similarity=0.200  Sum_probs=146.8

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCc--HHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDL--DEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~~~~~~  130 (255)
                      +|++|||||++|||+++|++|+++|++|++++|+++.              .+.....+|+++..  .+..+...   ..
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~--------------~~~~~~~~d~~~~~~~~~~~~~~~---~~   63 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG--------------EDLIYVEGDVTREEDVRRAVARAQ---EE   63 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS--------------SSSEEEECCTTCHHHHHHHHHHHH---HH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc--------------ccceEeeccccchhhhHHHHHhhh---cc
Confidence            5999999999999999999999999999999998653              23466788887631  22222222   22


Q ss_pred             CCccEEEEecCCCCC--cccccccCCHHHHHhHhHHhhhHHHHHHHHHhhh------hhhCCCcEEEEECCccccccCCC
Q 025260          131 LDVGVLINNVGISYP--YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPG------MLKRKKGAIVNIGSGAAIVIPSD  202 (255)
Q Consensus       131 ~~id~lv~nag~~~~--~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~------~~~~~~g~iv~vsS~~~~~~~~~  202 (255)
                      ...+..+++++....  ........+.+.|++.+++|+.+++.+++.+.+.      |++++.|+||++||..+..  +.
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~--~~  141 (241)
T d1uaya_          64 APLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE--GQ  141 (241)
T ss_dssp             SCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH--CC
T ss_pred             ccccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhcc--CC
Confidence            344567777776432  2233456788899999999999999999999987      5566789999999999988  78


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhhh
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLVM  251 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~  251 (255)
                      ++..+|++||+|+.+|+++|+.|++++|||||+|+||+++|++.++..+
T Consensus       142 ~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~  190 (241)
T d1uaya_         142 IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPE  190 (241)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCH
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhh
Confidence            9999999999999999999999999999999999999999998876553

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.7e-34  Score=234.38  Aligned_cols=191  Identities=15%  Similarity=0.147  Sum_probs=153.0

Q ss_pred             cCCcEEEEECCCC--chHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           51 KYGSWALVTGPTD--GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        51 ~~gk~vlITGas~--gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      ++||++|||||++  |||+++|+.|+++|++|++++|+++..+.. +++....  ........|+++.  +.+..+++.+
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~   79 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQL--GSDIVLQCDVAEDASIDTMFAELGK   79 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHHT--TCCCEEECCTTCHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhhc--CCcceeecccchHHHHHHHHHHhhh
Confidence            6799999999998  899999999999999999999997655544 4444432  2345566777653  2333344444


Q ss_pred             HhcCCCccEEEEecCCCCCcc---cccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC
Q 025260          127 AIEGLDVGVLINNVGISYPYA---RFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP  203 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~  203 (255)
                      .++  .+|++||||+......   ...++...+.|...+++|+.+.+.+++.+.|.|.  +++.|+++||..+..  +.|
T Consensus        80 ~~~--~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Ii~iss~~~~~--~~~  153 (258)
T d1qsga_          80 VWP--KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN--PGSALLTLSYLGAER--AIP  153 (258)
T ss_dssp             TCS--SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEE--EEEEEEEEECGGGTS--BCT
T ss_pred             ccc--ccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCcEEEEecchhhcc--CCC
Confidence            444  5779999999865322   1123567778999999999999999999999884  346799999998887  678


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      ....|++||+|+.+|++++++|++++|||||+|+||+|+|++.+...
T Consensus       154 ~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  200 (258)
T d1qsga_         154 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK  200 (258)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccc
Confidence            88999999999999999999999999999999999999999988754

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=5.8e-33  Score=232.27  Aligned_cols=183  Identities=21%  Similarity=0.194  Sum_probs=145.0

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeC-ChhhHHHHHHHHHhhcCCceEEEEEEE-----------------CCC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGR-NPDKLKDVSDSIQAKYAKTQIKSVVVD-----------------FSG  115 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~  115 (255)
                      .++|||||++|||+++|++|+++|++|++++| +++..++..+++.+.++. ....+.+|                 +++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPN-SAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTT-CEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCC-ceEEEEeecccccccccccccccccCCC
Confidence            47999999999999999999999999999765 566778888888877643 44555544                 443


Q ss_pred             --CcHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHH--------------hHhHHhhhHHHHHHHHHhhh
Q 025260          116 --DLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLK--------------NLIKVNVEGTTKVTQAVLPG  179 (255)
Q Consensus       116 --~~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~--------------~~~~~N~~~~~~l~~~~lp~  179 (255)
                        ++++.++++.+.++++|  +||||||+..+  .++.+.+.++|+              ..+++|+.++++++|.+.+.
T Consensus        82 ~~~v~~~~~~~~~~~G~iD--iLVnnAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  157 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCD--VLVNNASSFYP--TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  157 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCC--EEEECCCCCCC--CCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCC--EEEecCCccCC--CchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccch
Confidence              34667788888888555  99999999765  456666555544              47899999999999998765


Q ss_pred             h------hhCCCcEEEEECCccccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeee
Q 025260          180 M------LKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCF  243 (255)
Q Consensus       180 ~------~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T  243 (255)
                      +      .+.+.++|++++|..+..  +.++..+|++||+|+.+|+++|++|++++||+||+|+||++.|
T Consensus       158 ~~~~~~~~~~~~~~ii~~~s~~~~~--~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~  225 (284)
T d1e7wa_         158 VAGTPAKHRGTNYSIINMVDAMTNQ--PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL  225 (284)
T ss_dssp             HHTSCGGGSCSCEEEEEECCTTTTS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCC
T ss_pred             hhhhHHHhcCCCCcccccccccccC--CccceeeeccccccchhhhHHHHHHhCCccccccccccccccc
Confidence            4      344568999999988877  7788999999999999999999999999999999999998554

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=5.2e-33  Score=234.06  Aligned_cols=198  Identities=18%  Similarity=0.125  Sum_probs=153.4

Q ss_pred             ccccCCcEEEEECCCC--chHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhc---------CCc-eEEEEEEECC-
Q 025260           48 NLRKYGSWALVTGPTD--GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKY---------AKT-QIKSVVVDFS-  114 (255)
Q Consensus        48 ~~~~~gk~vlITGas~--gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~---------~~~-~~~~~~~d~~-  114 (255)
                      +++++||++|||||++  |||+++|++|+++|++|++++|++..............         ... .-....+|.. 
T Consensus         3 ~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (297)
T d1d7oa_           3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhc
Confidence            4678899999999886  99999999999999999999998765443333221110         001 1123333321 


Q ss_pred             ---------------------CCcHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHH
Q 025260          115 ---------------------GDLDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVT  173 (255)
Q Consensus       115 ---------------------~~~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~  173 (255)
                                           +..++.++++.+.+++  +|+||||||.......++.+.+.++|++.+++|+.+++.++
T Consensus        83 ~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~--iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~  160 (297)
T d1d7oa_          83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGS--IDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLL  160 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSC--EEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             cccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCC--Ccccccccccccccccchhhhhcccccccccchhhhhhhhh
Confidence                                 1346778888888884  66999999986544567889999999999999999999999


Q ss_pred             HHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHHHHHHHHHHHHHHHHHc-cCCceEEEeeeeeeeeCCcchhh
Q 025260          174 QAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYR-KSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       174 ~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~-~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      ++++|.|.++  |+++++++...... ..+....|+++|+++.++++.++.|+. ++|||||+|+||++.|++.+...
T Consensus       161 ~~~~~~~~~~--g~~~~~~~~~~~~~-~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~  235 (297)
T d1d7oa_         161 SHFLPIMNPG--GASISLTYIASERI-IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIG  235 (297)
T ss_dssp             HHHGGGEEEE--EEEEEEECGGGTSC-CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCS
T ss_pred             hHHHHHhhcC--Ccceeeeehhhccc-ccccccceecccccccccccccchhccccceEEecccccccccchhhhhcc
Confidence            9999988654  56666666554432 346678999999999999999999996 57999999999999999988643

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=2.8e-32  Score=226.30  Aligned_cols=191  Identities=18%  Similarity=0.183  Sum_probs=155.6

Q ss_pred             cCCcEEEEECC--CCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC--cHHHHHHHHH
Q 025260           51 KYGSWALVTGP--TDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD--LDEGVERIKE  126 (255)
Q Consensus        51 ~~gk~vlITGa--s~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~  126 (255)
                      ++||++|||||  ++|||+++|++|+++|++|++++|+.+++.+.   +.+.. +.+...+.+|++++  +++.++.+.+
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~---~~~~~-~~~~~~~~~dv~~~~~~~~~~~~v~~   79 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQR---ITDRL-PAKAPLLELDVQNEEHLASLAGRVTE   79 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHH---HHTTS-SSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHH---HHHHc-CCceeeEeeecccccccccccchhhh
Confidence            57999999994  57999999999999999999999998765432   33332 44567789999973  4677788888


Q ss_pred             HhcCC-CccEEEEecCCCCC---cccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC
Q 025260          127 AIEGL-DVGVLINNVGISYP---YARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD  202 (255)
Q Consensus       127 ~~~~~-~id~lv~nag~~~~---~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~  202 (255)
                      .++.. .+|+++||+|....   ...++.+.+.+++.+.+++|+.+.+...+...+.+.   ++.+++++|.....  +.
T Consensus        80 ~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~s~~~~~--~~  154 (268)
T d2h7ma1          80 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMN---PGGSIVGMDFDPSR--AM  154 (268)
T ss_dssp             HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEEEEECCCSS--CC
T ss_pred             ccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcc---cccccccccccccc--cC
Confidence            88765 58999999997642   123467888999999999999999999999888653   23455555555555  67


Q ss_pred             CCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          203 PLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       203 ~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                      |....|+++|+|+.+|++++++|+.++|||||+|+||+++|++.+++.
T Consensus       155 p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~  202 (268)
T d2h7ma1         155 PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIV  202 (268)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHH
T ss_pred             cccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhc
Confidence            889999999999999999999999999999999999999999887655

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.98  E-value=4.3e-31  Score=218.75  Aligned_cols=190  Identities=19%  Similarity=0.176  Sum_probs=149.5

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhh-HHHHHHHHHhhcCCceEEEEEEECCCC------cHHHHHHHHH
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK-LKDVSDSIQAKYAKTQIKSVVVDFSGD------LDEGVERIKE  126 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~------~~~~~~~~~~  126 (255)
                      .++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++.+.++ .+.....+|..++      +++.++++.+
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA-GSAVLCKGDLSLSSSLLDCCEDIIDCSFR   80 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSTTHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcC-CceEEEecccccchhHHHHHHHHHHHHHH
Confidence            479999999999999999999999999999998654 5677888877763 4556666666542      2344566777


Q ss_pred             HhcCCCccEEEEecCCCCCccc---------ccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-----CCcEEEEEC
Q 025260          127 AIEGLDVGVLINNVGISYPYAR---------FFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-----KKGAIVNIG  192 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~---------~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-----~~g~iv~vs  192 (255)
                      .+++  +|++|||||+..+...         ...+...+.+...+..|+.+++...+...+.+...     ..+.+++++
T Consensus        81 ~~g~--iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (266)
T d1mxha_          81 AFGR--CDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLC  158 (266)
T ss_dssp             HHSC--CCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEEC
T ss_pred             HhCC--CCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhh
Confidence            7775  5599999998754211         01123345577889999999999999888877543     357888999


Q ss_pred             CccccccCCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          193 SGAAIVIPSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       193 S~~~~~~~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                      |..+..  +.|++..|++||+|+++|+++++.|+.++|||||+|+||+++|++...
T Consensus       159 ~~~~~~--~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~  212 (266)
T d1mxha_         159 DAMTDL--PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP  212 (266)
T ss_dssp             CGGGGS--CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC
T ss_pred             hccccc--cCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC
Confidence            988887  788999999999999999999999999999999999999999987654

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.97  E-value=1.3e-31  Score=223.03  Aligned_cols=192  Identities=15%  Similarity=0.162  Sum_probs=147.2

Q ss_pred             cCCcEEEEECCCC--chHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC--CcHHHHHHHHH
Q 025260           51 KYGSWALVTGPTD--GIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG--DLDEGVERIKE  126 (255)
Q Consensus        51 ~~gk~vlITGas~--gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~  126 (255)
                      ++||++|||||+|  |||+++|++|+++|++|++++|+++ +++..+++.+....  .....+|+++  ++++.++++.+
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~   79 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNS--PYVYELDVSKEEHFKSLYNSVKK   79 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTC--CCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCCc--eeEeeecccchhhHHHHHHHHHH
Confidence            6799999999875  9999999999999999999999954 45556666665433  4557888876  34667777888


Q ss_pred             HhcCCCccEEEEecCCCCCcc--cccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          127 AIEGLDVGVLINNVGISYPYA--RFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                      .++  .+|++|||+|......  ....+..++.+...+.++..+.....+...+.+  +..+.|+++|+.+...  +.+.
T Consensus        80 ~~g--~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~~~~~~--~~~~  153 (274)
T d2pd4a1          80 DLG--SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLL--NNGASVLTLSYLGSTK--YMAH  153 (274)
T ss_dssp             HTS--CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE--EEEEEEEEEECGGGTS--BCTT
T ss_pred             HcC--CCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccc--ccCcceeeeccccccc--cccc
Confidence            777  4669999999865421  223345556666666777777777777666643  2234566666666555  5677


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhhh
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLVM  251 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~  251 (255)
                      ...|++||+|+.+++++++.|++++|||||+|+||++.|++.+....
T Consensus       154 ~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~  200 (274)
T d2pd4a1         154 YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIAD  200 (274)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTT
T ss_pred             chhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCc
Confidence            88999999999999999999999999999999999999999876653

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.97  E-value=2.4e-30  Score=213.76  Aligned_cols=177  Identities=19%  Similarity=0.219  Sum_probs=145.9

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh---hhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP---DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      .++++|||||++|||+++|++|+++|+ +|++++|+.   +..++..+++.+.  +.++.++.||++|.  +.++++.+.
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dv~d~--~~~~~~~~~   83 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDR--ESVRELLGG   83 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCH--HHHHHHHHT
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhc--cccccccccccchH--HHHHHhhcc
Confidence            467999999999999999999999999 589999975   4456666777654  56899999999985  445555555


Q ss_pred             hcC-CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          128 IEG-LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       128 ~~~-~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      ..+ .++|.++||+|....  .++.+.+.++|++++++|+.+++++.+.+.    .++.++||++||.++..  +.++..
T Consensus        84 i~~~~~i~~vv~~ag~~~~--~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~----~~~~~~iv~~SS~a~~~--g~~~~~  155 (259)
T d2fr1a1          84 IGDDVPLSAVFHAAATLDD--GTVDTLTGERIERASRAKVLGARNLHELTR----ELDLTAFVLFSSFASAF--GAPGLG  155 (259)
T ss_dssp             SCTTSCEEEEEECCCCCCC--CCGGGCCHHHHHHHTHHHHHHHHHHHHHHT----TSCCSEEEEEEEHHHHT--CCTTCT
T ss_pred             ccccccccccccccccccc--cccccccHHHHHHHhhhhccchhHHHHHhh----ccCCceEeeecchhhcc--CCcccH
Confidence            433 368899999999865  668899999999999999999999888643    35678999999999998  789999


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                      .|+++|+++++|++.++    ..|+++++|+||.+.++
T Consensus       156 ~YaAaka~l~~la~~~~----~~Gi~v~~I~pg~~~~~  189 (259)
T d2fr1a1         156 GYAPGNAYLDGLAQQRR----SDGLPATAVAWGTWAGS  189 (259)
T ss_dssp             TTHHHHHHHHHHHHHHH----HTTCCCEEEEECCBC--
T ss_pred             HHHHHHHhHHHHHHHHH----hCCCCEEECCCCcccCC
Confidence            99999999988876655    45999999999988644

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.95  E-value=8.9e-28  Score=197.68  Aligned_cols=167  Identities=22%  Similarity=0.247  Sum_probs=117.7

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHH-HHHHhcC--
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVER-IKEAIEG--  130 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~--  130 (255)
                      |+|+||||++|||+++|++|+++|++|++++|++.+                   ..+|+.+.  +..+. ..+...+  
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-------------------~~~d~~~~--~~~~~~~~~~~~~~~   60 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-------------------VIADLSTA--EGRKQAIADVLAKCS   60 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-------------------EECCTTSH--HHHHHHHHHHHTTCT
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-------------------HHHHhcCH--HHHHHHHHHHHHHhC
Confidence            789999999999999999999999999999997542                   13455543  11111 1222211  


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCcccccc-----------
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVI-----------  199 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~-----------  199 (255)
                      ..+|++|||||+...         .+.+.+...+|..+...+.+...|.+.+...+.+.++++......           
T Consensus        61 ~~id~lv~~Ag~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (257)
T d1fjha_          61 KGMDGLVLCAGLGPQ---------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALAL  131 (257)
T ss_dssp             TCCSEEEECCCCCTT---------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHH
T ss_pred             CCCcEEEEcCCCCCc---------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhc
Confidence            147899999997532         123677789999999999999999887766666666665432220           


Q ss_pred             ---------------CCCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcchhh
Q 025260          200 ---------------PSDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLNDLV  250 (255)
Q Consensus       200 ---------------~~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~  250 (255)
                                     .+.++..+|++||+|+.+|+|+|+.|++++|||||+|+||+++||+++...
T Consensus       132 ~~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  197 (257)
T d1fjha_         132 EAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGL  197 (257)
T ss_dssp             HHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------
T ss_pred             cCCcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhc
Confidence                           012335579999999999999999999999999999999999999987654

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.85  E-value=1.5e-22  Score=159.13  Aligned_cols=155  Identities=19%  Similarity=0.191  Sum_probs=114.2

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      ..+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+..   ......+|+++.     +.+.+.
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~d~~~~-----~~~~~~   89 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF---KVNVTAAETADD-----ASRAEA   89 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH---TCCCEEEECCSH-----HHHHHH
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc---chhhhhhhcccH-----HHHHHH
Confidence            456789999999999999999999999999999999999999999999887754   334577888875     455666


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchh
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSV  207 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~  207 (255)
                      +++  +|+||||||+.      ....+.+.|++.+++|+.+.++....+.+.+.... .....+++...... ...+...
T Consensus        90 ~~~--iDilin~Ag~g------~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~-~~~g~~~  159 (191)
T d1luaa1          90 VKG--AHFVFTAGAIG------LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDAT-DKGKEYGGKRAFGA-LGIGGLK  159 (191)
T ss_dssp             TTT--CSEEEECCCTT------CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTT-CEEEEETTEEEECH-HHHHHHH
T ss_pred             hcC--cCeeeecCccc------cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhc-cCcEEecceEEEec-cCcCcHH
Confidence            665  55999999974      23568899999999999888776655544443222 22233333332221 1123457


Q ss_pred             chHHHHHHHHHHH
Q 025260          208 YAATKAYIDQFSR  220 (255)
Q Consensus       208 Y~asK~al~~~~~  220 (255)
                      |+++|+++..+++
T Consensus       160 y~~sk~a~~~l~~  172 (191)
T d1luaa1         160 LKLHRACIAKLFE  172 (191)
T ss_dssp             HHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999988764

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.79  E-value=8.4e-19  Score=150.22  Aligned_cols=177  Identities=18%  Similarity=0.113  Sum_probs=125.0

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhh-----HHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK-----LKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      .|+||||||+|.||.+++++|.++|++|+.++|....     ++...++...  ...++.++.+|++|.     +.+.+.
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~-----~~~~~~   73 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHT--CNPKFHLHYGDLSDT-----SNLTRI   73 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-----------------------CCEEECCCCSSCH-----HHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhh--cCCCeEEEEeecCCH-----HHHHHH
Confidence            3899999999999999999999999999999996532     2222222111  245688899999875     344444


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC-------
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP-------  200 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~-------  200 (255)
                      +.+.++|+++|.|+.....      .+.++.+..+++|+.|+.++++++...-. ++..|+|++||...+..+       
T Consensus        74 ~~~~~~d~v~h~aa~~~~~------~~~~~~~~~~~~Nv~gt~nllea~~~~~~-~~~~r~i~~SS~~vYG~~~~~~~~E  146 (357)
T d1db3a_          74 LREVQPDEVYNLGAMSHVA------VSFESPEYTADVDAMGTLRLLEAIRFLGL-EKKTRFYQASTSELYGLVQEIPQKE  146 (357)
T ss_dssp             HHHHCCSEEEECCCCCTTT------TTTSCHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGGTTCCSSSBCT
T ss_pred             HhccCCCEEEEeecccccc------hhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CCCcEEEEEEchhhhCCCCCCCcCC
Confidence            5545677999999986431      12233466789999999999998765322 234689999987644321       


Q ss_pred             --CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          201 --SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       201 --~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                        +..+..+|+.||.+.+.+++.+++.+   |+++..++|+.+-.|..
T Consensus       147 ~~~~~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~~  191 (357)
T d1db3a_         147 TTPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRR  191 (357)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTS
T ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCCC
Confidence              11235689999999999999988775   79999999999988753

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.71  E-value=2.5e-16  Score=133.77  Aligned_cols=176  Identities=19%  Similarity=0.171  Sum_probs=127.7

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .+||+||||||+|.||.+++++|.++|++|+.+.|+.++.....+.............+..|+.+.     +.+.+.+. 
T Consensus         9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~~~~-   82 (342)
T d1y1pa1           9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQ-----GAYDEVIK-   82 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTST-----TTTTTTTT-
T ss_pred             CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccch-----hhhhhhcc-
Confidence            359999999999999999999999999999999999877666555444444344455677788875     23333444 


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC----------
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP----------  200 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~----------  200 (255)
                       +.|+++|+|+....      ..+.   ...++.|+.|+.++++.+...   ++-.++|++||..+...+          
T Consensus        83 -~~~~v~~~a~~~~~------~~~~---~~~~~~nv~gt~~ll~~~~~~---~~v~~~i~~SS~~~~~~~~~~~~~~~~~  149 (342)
T d1y1pa1          83 -GAAGVAHIASVVSF------SNKY---DEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNVEGIYLD  149 (342)
T ss_dssp             -TCSEEEECCCCCSC------CSCH---HHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTCCCCEEC
T ss_pred             -cchhhhhhcccccc------cccc---cccccchhhhHHHHHHhhhcc---cccccccccccceeeccCCCCCCCcccc
Confidence             45699999986532      2232   455778999999988886542   234689999997643210          


Q ss_pred             -------------------CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          201 -------------------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       201 -------------------~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                                         +.....+|+.||.+.+.+++.+.++.. .++++..++|+.+-.|..
T Consensus       150 e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~~  213 (342)
T d1y1pa1         150 EKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTIF  213 (342)
T ss_dssp             TTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCCS
T ss_pred             ccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCCC
Confidence                               011234699999999999999988764 468899999998877643

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.70  E-value=8.8e-17  Score=136.31  Aligned_cols=173  Identities=16%  Similarity=0.136  Sum_probs=124.2

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG  134 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id  134 (255)
                      .+|||||+|.||.+++++|+++|++|++++|................ ...+.++++|++|.     +.+.+.+...++|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~-----~~l~~~~~~~~~d   75 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNE-----ALMTEILHDHAID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH-TSCCEEEECCTTCH-----HHHHHHHHHTTCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhc-CCCCEEEEeecCCH-----HHHHHHHhccCCC
Confidence            49999999999999999999999999999874332222222221111 34678899999986     3444444444577


Q ss_pred             EEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC----------CCCC
Q 025260          135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP----------SDPL  204 (255)
Q Consensus       135 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~----------~~~~  204 (255)
                      ++||.|+....      ..+.++.++.+++|+.|+.++++++...    +-.++|++||...+...          ....
T Consensus        76 ~ViHlAa~~~~------~~~~~~~~~~~~~Nv~gt~nlL~~~~~~----~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p  145 (338)
T d1udca_          76 TVIHFAGLKAV------GESVQKPLEYYDNNVNGTLRLISAMRAA----NVKNFIFSSSATVYGDQPKIPYVESFPTGTP  145 (338)
T ss_dssp             EEEECCSCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCCSSSBCTTSCCCCC
T ss_pred             EEEECCCccch------hhHHhCHHHHHHhHHHHHHHHHHHHHHh----CCCEEEecCcceEEccccccccccccccCCC
Confidence            99999996532      1123345678999999999999987653    34579999987765421          1123


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                      ...|+.+|.+.+.+.+....+.  .++.+..++|+.+-.+.
T Consensus       146 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~  184 (338)
T d1udca_         146 QSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAH  184 (338)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCC
T ss_pred             cchHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEecc
Confidence            6789999999999988777664  47899999999988764

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.70  E-value=4.1e-16  Score=134.70  Aligned_cols=179  Identities=17%  Similarity=0.115  Sum_probs=126.9

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh----------------hHHHHHHHHHhhcCCceEEEEEEECCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD----------------KLKDVSDSIQAKYAKTQIKSVVVDFSGD  116 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~----------------~~~~~~~~~~~~~~~~~~~~~~~d~~~~  116 (255)
                      |+.||||||+|.||.+++++|+++|++|+++|.-..                ...+......... +..+.++.+|++|.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~Dl~d~   79 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVGDICDF   79 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEESCTTSH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhc-CCCcEEEEccCCCH
Confidence            789999999999999999999999999999872111                1222222222222 45678889999986


Q ss_pred             cHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccc
Q 025260          117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA  196 (255)
Q Consensus       117 ~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~  196 (255)
                        +   .+.+.+.+.++|+++|.|+....   +....+.+.....+++|+.|+.++++++...   ....++++.||...
T Consensus        80 --~---~l~~~~~~~~~d~ViHlAa~~~~---~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~---~~~~~~i~~ss~~~  148 (393)
T d1i24a_          80 --E---FLAESFKSFEPDSVVHFGEQRSA---PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF---GEECHLVKLGTMGE  148 (393)
T ss_dssp             --H---HHHHHHHHHCCSEEEECCSCCCH---HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH---CTTCEEEEECCGGG
T ss_pred             --H---HHHHHHHhhcchheecccccccc---ccccccccccccccccccccccHHHHHHHHh---ccccceeecccccc
Confidence              3   34444444467799999987542   1234455667788999999999999986542   23346777777654


Q ss_pred             cccC----------------------CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          197 IVIP----------------------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       197 ~~~~----------------------~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                      +...                      +..+...|+.||.+.+.+++.++++.   ++++..++|+.+-.|..
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~~v~G~~~  217 (393)
T d1i24a_         149 YGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKT  217 (393)
T ss_dssp             GCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCC
T ss_pred             ccccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccccccCCCc
Confidence            4311                      11223579999999999999888776   89999999999988653

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.69  E-value=1.2e-16  Score=136.00  Aligned_cols=175  Identities=17%  Similarity=0.129  Sum_probs=122.7

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      .|+||||||+|.||.+++++|+++|++|+++++....-.+......... ...+.++.+|++|.     +.+.+.+....
T Consensus         1 ~K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~-----~~l~~~~~~~~   74 (347)
T d1z45a2           1 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT-KHHIPFYEVDLCDR-----KGLEKVFKEYK   74 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH-TSCCCEEECCTTCH-----HHHHHHHHHSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhc-ccCCeEEEeecCCH-----HHHHHHHhccC
Confidence            3789999999999999999999999999999864332111111111111 34567788999875     33444444445


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC------------
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP------------  200 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~------------  200 (255)
                      +|+++|+|+.....      ...+..+....+|+.++.++.+++..    .+-.++|++||...+...            
T Consensus        75 ~d~VihlAa~~~~~------~~~~~~~~~~~~N~~~t~~ll~~~~~----~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~  144 (347)
T d1z45a2          75 IDSVIHFAGLKAVG------ESTQIPLRYYHNNILGTVVLLELMQQ----YNVSKFVFSSSATVYGDATRFPNMIPIPEE  144 (347)
T ss_dssp             CCEEEECCSCCCHH------HHHHSHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCCGGGSTTCCSBCTT
T ss_pred             CCEEEEcccccccc------ccccCcccccccchhhhHHHHHHHHh----cccceEEeecceeeecCcccCCCCCccccc
Confidence            77999999976321      12233466788999999999998754    333479999997765421            


Q ss_pred             -CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          201 -SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       201 -~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                       +..+...|+.||.+.+.+.+.+.++. ..++.+..++|+.+-.+
T Consensus       145 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~g~  188 (347)
T d1z45a2         145 CPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGA  188 (347)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECC
T ss_pred             cCCCCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceEee
Confidence             11234679999999999998887653 34788999998877654

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=2.6e-16  Score=133.49  Aligned_cols=176  Identities=18%  Similarity=0.083  Sum_probs=121.3

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhh-----HHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK-----LKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      |+||||||+|.||.+++++|.++|++|+.++|....     ++........ .....+.++.+|++|.  +..+++.   
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~--~~~~~~~---   75 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQA-HIEGNMKLHYGDLTDS--TCLVKII---   75 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCH--HHHHHHH---
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhh-hccCCcEEEEeecCCc--hhhHHHH---
Confidence            556999999999999999999999999999986432     1211111111 1134678999999976  3333333   


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC--------
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP--------  200 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~--------  200 (255)
                      .+.+++++++.++....      ..+.+.....+++|+.|+.++.+++..... .+..++|++||.+.+..+        
T Consensus        76 ~~~~~~~v~~~~a~~~~------~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~E~  148 (347)
T d1t2aa_          76 NEVKPTEIYNLGAQSHV------KISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKET  148 (347)
T ss_dssp             HHHCCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCTT
T ss_pred             hhcccceeeeeeecccc------chhhccchhhhhhHHHHHHHHHHHHHHcCC-CCCcEEEEecchheecCCCCCCCCCC
Confidence            33356688888886532      123344456789999999999988765432 233589999987654321        


Q ss_pred             -CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          201 -SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       201 -~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                       +..+..+|+.||.+.+.+++.+++++   ++.+..++|+.+-.|.
T Consensus       149 ~~~~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp~  191 (347)
T d1t2aa_         149 TPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPR  191 (347)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTT
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCC
Confidence             11224679999999999999887775   7899999998888763

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.66  E-value=1.2e-16  Score=136.91  Aligned_cols=176  Identities=15%  Similarity=0.058  Sum_probs=123.9

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEE-EeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      .||||||+|.||.+++++|+++|++|++ +++......  .+.+........+.++.+|++|.  +.   +.+.+...++
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~--~~---l~~~~~~~~~   74 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN--LESLSDISESNRYNFEHADICDS--AE---ITRIFEQYQP   74 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCH--HH---HHHHHHHHCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc--HHHHHhhhhcCCcEEEEccCCCH--HH---HHHHHHhCCC
Confidence            5899999999999999999999997555 443221110  01112222245788899999986  33   3333333357


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-----CCcEEEEECCccccccC--------
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-----KKGAIVNIGSGAAIVIP--------  200 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-----~~g~iv~vsS~~~~~~~--------  200 (255)
                      |++||+|+....      ..+.++....+++|+.|+.++.+.+.......     +..++|++||...+...        
T Consensus        75 d~VihlAa~~~~------~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~  148 (361)
T d1kewa_          75 DAVMHLAAESHV------DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVEN  148 (361)
T ss_dssp             SEEEECCSCCCH------HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCT
T ss_pred             CEEEECccccch------hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCcccc
Confidence            799999997532      11233346689999999999999987754332     34589999997765421        


Q ss_pred             -----------CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          201 -----------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       201 -----------~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                                 +..+...|+.||.+.+.+++..+..+   |+++..++|+.+-.|..
T Consensus       149 ~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~  202 (361)
T d1kewa_         149 SVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYH  202 (361)
T ss_dssp             TSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTC
T ss_pred             ccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCC
Confidence                       11124569999999999999998776   79999999999988754

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.66  E-value=4.9e-16  Score=131.24  Aligned_cols=179  Identities=17%  Similarity=0.120  Sum_probs=122.9

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh-----hHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD-----KLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      .|++|||||+|.||++++++|.++|++|+.++|..+     +........... ....+.+..+|+++.     +.+.+.
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Di~~~-----~~~~~~   74 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV-NKALMKLHYADLTDA-----SSLRRW   74 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCH-----HHHHHH
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhc-cccceEEEEccccCH-----HHHHHH
Confidence            389999999999999999999999999999998532     222111111111 145677888998875     334443


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECCccccccC------
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGSGAAIVIP------  200 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS~~~~~~~------  200 (255)
                      +....+|+++|.|+....      ..+.+.....++.|..+...+..++.....+. ...+++..||.......      
T Consensus        75 ~~~~~~D~Vih~Aa~~~~------~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E  148 (339)
T d1n7ha_          75 IDVIKPDEVYNLAAQSHV------AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSE  148 (339)
T ss_dssp             HHHHCCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCT
T ss_pred             Hhhhccchhhhccccccc------cccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCC
Confidence            333356799999997532      12334456788999999999988877544333 23456666654432210      


Q ss_pred             --CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          201 --SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       201 --~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                        +..+...|+.||.+.+.+++..+++.   |+.+..++|+.+-.|..
T Consensus       149 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~  193 (339)
T d1n7ha_         149 TTPFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRR  193 (339)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTS
T ss_pred             CCCCCCcchhhHHHHHHHHHHHHHHHHh---CCCEEEEEEccccCCCC
Confidence              11235689999999999999888775   79999999999888753

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=5.8e-16  Score=129.91  Aligned_cols=165  Identities=13%  Similarity=0.068  Sum_probs=116.0

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      .|.||||||+|.||++++++|.++|++|+++++......+...   .......+...+.|..+.          .+.  +
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~----------~~~--~   65 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE---HWIGHENFELINHDVVEP----------LYI--E   65 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTG---GGTTCTTEEEEECCTTSC----------CCC--C
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHH---HhcCCCceEEEehHHHHH----------HHc--C
Confidence            3789999999999999999999999999999874322111111   111133455555554432          112  5


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC------------
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP------------  200 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~------------  200 (255)
                      +|++||+|+.....   .   +.++.++.+++|+.|+.++++++..    .+ .++|++||.+.+..+            
T Consensus        66 ~d~VihlAa~~~~~---~---~~~~~~~~~~~Nv~g~~~ll~~~~~----~~-~k~I~~SS~~vy~~~~~~~~~e~~~~~  134 (312)
T d2b69a1          66 VDQIYHLASPASPP---N---YMYNPIKTLKTNTIGTLNMLGLAKR----VG-ARLLLASTSEVYGDPEVHPQSEDYWGH  134 (312)
T ss_dssp             CSEEEECCSCCSHH---H---HTTCHHHHHHHHHHHHHHHHHHHHH----HT-CEEEEEEEGGGGBSCSSSSBCTTCCCB
T ss_pred             CCEEEECcccCCch---h---HHhCHHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEEChheecCCCCCCCCccccCC
Confidence            77999999975321   0   1122456789999999999988643    23 479999997665421            


Q ss_pred             --CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          201 --SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       201 --~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                        +..+...|+.||.+.+.+++..++++   |+++..++|+.+-.|..
T Consensus       135 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~  179 (312)
T d2b69a1         135 VNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRM  179 (312)
T ss_dssp             CCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTC
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCC
Confidence              11235679999999999999998886   89999999999998653

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.63  E-value=3.9e-15  Score=126.07  Aligned_cols=176  Identities=15%  Similarity=0.071  Sum_probs=124.6

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHh---hcCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQA---KYAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      .+-|++|||||+|.||.+++++|.++|++|+.++|....-.+..+....   ......+..+..|..|.     ......
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~-----~~~~~~   88 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNL-----DDCNNA   88 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSH-----HHHHHH
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccc-----cccccc
Confidence            3468999999999999999999999999999998743322222222111   11123577888888764     233333


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC-------
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP-------  200 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~-------  200 (255)
                      ...  .+.+++.++....      ..+.++....+++|+.|+.++++++..    .+..++|++||...+...       
T Consensus        89 ~~~--~~~v~~~~a~~~~------~~~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~E  156 (341)
T d1sb8a_          89 CAG--VDYVLHQAALGSV------PRSINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAASSSTYGDHPGLPKVE  156 (341)
T ss_dssp             HTT--CSEEEECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSSBCT
T ss_pred             ccc--ccccccccccccc------cccccCccchhheeehhHHHHHHHHHh----cCCceEEEcccceeeCCCCCCCccC
Confidence            333  3478888775432      123455677899999999999998754    444589999998766521       


Q ss_pred             --CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          201 --SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       201 --~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                        +..+...|+.||.+.+.+.+.+++..   ++++..++|+.+-.+..
T Consensus       157 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~~  201 (341)
T d1sb8a_         157 DTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQ  201 (341)
T ss_dssp             TCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTC
T ss_pred             CCCCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccCc
Confidence              11234789999999999999998776   78999999998886643

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.63  E-value=1.3e-15  Score=127.76  Aligned_cols=173  Identities=15%  Similarity=0.027  Sum_probs=120.3

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      |+||||||+|.||++++++|.++|++|+.++|......  .+.+.......++.++.+|++|.  +.   +.+.+.....
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~--~~---~~~~~~~~~~   73 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--RWRLRELGIEGDIQYEDGDMADA--CS---VQRAVIKAQP   73 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHTTCGGGEEEEECCTTCH--HH---HHHHHHHHCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCccc--HHHHHHhcccCCcEEEEccccCh--HH---hhhhhccccc
Confidence            78999999999999999999999999999998754321  12222223345688999999975  33   3333333344


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC---------CCCC
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDPL  204 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~---------~~~~  204 (255)
                      ++++++|+.....      ...+.....++.|+.|+.++++++...   ....++++.||..-....         +...
T Consensus        74 ~~~~~~a~~~~~~------~~~~~~~~~~~~n~~g~~~~l~~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p  144 (321)
T d1rpna_          74 QEVYNLAAQSFVG------ASWNQPVTTGVVDGLGVTHLLEAIRQF---SPETRFYQASTSEMFGLIQAERQDENTPFYP  144 (321)
T ss_dssp             SEEEECCSCCCHH------HHTTSHHHHHHHHTHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCSCSSSSBCTTSCCCC
T ss_pred             ccccccccccccc------ccccchHHHHhhhhhchHHHHHHHHHh---CCCcccccccchhhcCcccCCCCCCCCCccc
Confidence            5788887764321      111224677899999999998887542   223456666665433210         1123


Q ss_pred             chhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          205 YSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       205 ~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                      ...|+.||.+.+.+.+.++.+.   ++++..+.|+.+-.|.
T Consensus       145 ~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~  182 (321)
T d1rpna_         145 RSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPL  182 (321)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTT
T ss_pred             cChhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCC
Confidence            5789999999999999998776   7899999998888775

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.62  E-value=2.6e-15  Score=125.61  Aligned_cols=155  Identities=13%  Similarity=0.101  Sum_probs=113.0

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      .|.||||||+|.||.+++++|+++|+.|+++++..+                      +|+.+.  +.++.+.+   ..+
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~----------------------~~~~~~--~~~~~~~~---~~~   54 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE----------------------LNLLDS--RAVHDFFA---SER   54 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT----------------------CCTTCH--HHHHHHHH---HHC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh----------------------ccccCH--HHHHHHHh---hcC
Confidence            478999999999999999999999998887664321                      355553  33333333   224


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC------------
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP------------  200 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~------------  200 (255)
                      +|.++|+|+.....     ........+.+++|+.++.++++++..    .+-.++|++||.+.+..+            
T Consensus        55 ~d~v~~~a~~~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~a~~----~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~  125 (315)
T d1e6ua_          55 IDQVYLAAAKVGGI-----VANNTYPADFIYQNMMIESNIIHAAHQ----NDVNKLLFLGSSCIYPKLAKQPMAESELLQ  125 (315)
T ss_dssp             CSEEEECCCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGSCTTCCSSBCGGGTTS
T ss_pred             CCEEEEcchhcccc-----ccchhhHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEECCceEcCCCCCCCccCCcccc
Confidence            67999999775321     112333456688999999999888644    344579999998876521            


Q ss_pred             --CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          201 --SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       201 --~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                        +.+...+|+.||.+.+.+++.+.++.   |+++..++|+.+-.|..
T Consensus       126 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~~  170 (315)
T d1e6ua_         126 GTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHD  170 (315)
T ss_dssp             SCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTC
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCC
Confidence              11223579999999999999998876   89999999999987643

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=7e-15  Score=124.62  Aligned_cols=173  Identities=16%  Similarity=0.149  Sum_probs=122.7

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCC------hhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN------PDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~------~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      |.||||||+|.||.+++++|+++|++|+.+++.      .....+..+.+.... ..++.++.+|++|.     +.+.+.
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~-----~~l~~~   76 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT-GRSVEFEEMDILDQ-----GALQRL   76 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH-TCCCEEEECCTTCH-----HHHHHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhc-CCCcEEEEeecccc-----cccccc
Confidence            678999999999999999999999999998742      111222222222222 45678899999985     444554


Q ss_pred             hcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC-------
Q 025260          128 IEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP-------  200 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~-------  200 (255)
                      +...++++++|.|+....      ..+.+...+.+++|+.|+.++.+++..    .+-.+++++||.......       
T Consensus        77 ~~~~~~~~i~h~Aa~~~~------~~~~~~p~~~~~~Nv~gt~~l~~~~~~----~~v~~~i~~ss~~~~~~~~~~~~~~  146 (346)
T d1ek6a_          77 FKKYSFMAVIHFAGLKAV------GESVQKPLDYYRVNLTGTIQLLEIMKA----HGVKNLVFSSSATVYGNPQYLPLDE  146 (346)
T ss_dssp             HHHCCEEEEEECCSCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGGCSCSSSSBCT
T ss_pred             ccccccccccccccccCc------HhhHhCHHHHHHhhhcccccccchhhh----cCcccccccccceeeeccccccccc
Confidence            555578899999997532      122333467789999999998888643    444579999887655521       


Q ss_pred             ---CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          201 ---SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       201 ---~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                         ......+|+.+|.+.+...+.+++.  ..+.....++|+.+-.+
T Consensus       147 ~~~~~~~~~~Y~~~k~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~  191 (346)
T d1ek6a_         147 AHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGA  191 (346)
T ss_dssp             TSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECC
T ss_pred             cccccccCChHHHHHHHHHHHHHHHHHh--ccCCceEEEeecceecc
Confidence               1123457999999999888776653  24789999999888765

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.60  E-value=3.5e-15  Score=126.70  Aligned_cols=178  Identities=16%  Similarity=0.114  Sum_probs=126.9

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      ++||.||||||+|.||.+++++|.++|++|+.++|+..+.....+..+.   ...+..+.+|++|.     +.+.+....
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~---~~~i~~~~~Dl~d~-----~~l~~~~~~   77 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV---ADGMQSEIGDIRDQ-----NKLLESIRE   77 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT---TTTSEEEECCTTCH-----HHHHHHHHH
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhc---ccCCeEEEeeccCh-----Hhhhhhhhh
Confidence            5699999999999999999999999999999999987654443332211   33578889999875     334444444


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC----------
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP----------  200 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~----------  200 (255)
                      .++|+++|.|+....      ..+.+..+..+++|+.|+.++++++...   .....++..||......+          
T Consensus        78 ~~~~~v~~~aa~~~~------~~~~~~~~~~~~~Nv~g~~n~l~~~~~~---~~~~~~~~~s~~~~~~~~~~~~~~~~~~  148 (356)
T d1rkxa_          78 FQPEIVFHMAAQPLV------RLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENE  148 (356)
T ss_dssp             HCCSEEEECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTS
T ss_pred             chhhhhhhhhccccc------cccccCCccccccccccchhhhhhhhcc---cccccccccccccccccccccccccccc
Confidence            456799999987533      2234446778899999999999887542   233455555554433311          


Q ss_pred             CCCCchhchHHHHHHHHHHHHHHHHHc------cCCceEEEeeeeeeeeCC
Q 025260          201 SDPLYSVYAATKAYIDQFSRSLYVEYR------KSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       201 ~~~~~~~Y~asK~al~~~~~~l~~e~~------~~gi~v~~v~Pg~v~T~~  245 (255)
                      +..+..+|+.+|.+.+.+.+..+.++.      ..++.+..+.|+.+-.|.
T Consensus       149 ~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~  199 (356)
T d1rkxa_         149 AMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGG  199 (356)
T ss_dssp             CBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTT
T ss_pred             ccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCC
Confidence            112356799999999999999888763      346889999998776543

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.58  E-value=1.5e-14  Score=122.31  Aligned_cols=167  Identities=14%  Similarity=0.131  Sum_probs=120.7

Q ss_pred             EEEEECCCCchHHHHHHHHHHcC-CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G-~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      .||||||+|.||++++++|+++| ++|+.+++..+...+..       ...++.++.+|+++. .+..+...   .  ++
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-------~~~~~~~i~~Di~~~-~~~~~~~~---~--~~   68 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIH-SEWIEYHV---K--KC   68 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTC-SHHHHHHH---H--HC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-------cCCCeEEEECccCCh-HHHHHHHH---h--CC
Confidence            48999999999999999999999 58999988655433221       145689999999875 12222222   2  35


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCC------------
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS------------  201 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~------------  201 (255)
                      |+++|+|+.....      ...+.....+++|+.|+.++++++..    . +.+.++.||...+..++            
T Consensus        69 d~Vih~a~~~~~~------~~~~~~~~~~~~nv~gt~~ll~~~~~----~-~~~~~~~ss~~~~~~~~~~~~~~~~~~~~  137 (342)
T d2blla1          69 DVVLPLVAIATPI------EYTRNPLRVFELDFEENLRIIRYCVK----Y-RKRIIFPSTSEVYGMCSDKYFDEDHSNLI  137 (342)
T ss_dssp             SEEEECBCCCCHH------HHHHSHHHHHHHHTHHHHHHHHHHHH----T-TCEEEEECCGGGGBTCCCSSBCTTTCCCB
T ss_pred             Ccccccccccccc------ccccCCcccccccccccccccccccc----c-ccccccccccccccccccccccccccccc
Confidence            6999999986431      12233457789999999999999643    2 24567777766554211            


Q ss_pred             ----CCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcch
Q 025260          202 ----DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLND  248 (255)
Q Consensus       202 ----~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~  248 (255)
                          ..+...|+.||.+.+.+.+..+++.   |+++..++|..+-.+....
T Consensus       138 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~~~~  185 (342)
T d2blla1         138 VGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDN  185 (342)
T ss_dssp             CCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCC
T ss_pred             ccccCCCcchhhhcccchhhhhhhhhccc---CceeEEeeccccccccccc
Confidence                1224679999999999999998886   8999999999998875443

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.56  E-value=4.1e-14  Score=118.76  Aligned_cols=167  Identities=15%  Similarity=0.086  Sum_probs=112.1

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh-hHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD-KLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      .||||||+|.||.+++++|.++|++|+++++-.. ...+..+.+..   ..++.++.+|+++.     +.+.+.+.+..+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~---~~~~~~i~~Di~~~-----~~l~~~~~~~~~   73 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNK-----NDVTRLITKYMP   73 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCH-----HHHHHHHHHHCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc---cCCcEEEEcccCCH-----HHHHHHHHhcCC
Confidence            5899999999999999999999999999875322 22222233322   34577889999875     333444433356


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCC------------
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS------------  201 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~------------  201 (255)
                      |++||+|+....      ..+.++.+..+++|+.|+.++++++..    .+..+.++.||.......+            
T Consensus        74 d~Vih~aa~~~~------~~~~~~~~~~~~~Nv~gt~nll~~~~~----~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~  143 (338)
T d1orra_          74 DSCFHLAGQVAM------TTSIDNPCMDFEINVGGTLNLLEAVRQ----YNSNCNIIYSSTNKVYGDLEQYKYNETETRY  143 (338)
T ss_dssp             SEEEECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHH----HCTTCEEEEEEEGGGGTTCTTSCEEECSSCE
T ss_pred             ceEEeecccccc------cccccChHHHHHHHHHHHHHHHHhhhc----ccccccccccccccccccccccccccccccc
Confidence            799999987643      112234567889999999999988654    3334455555544433110            


Q ss_pred             --------------CCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeee
Q 025260          202 --------------DPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLC  242 (255)
Q Consensus       202 --------------~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~  242 (255)
                                    ......|+.+|...+.+.....+.+   +.....+.|..+.
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~---~~~~~~~~~~~~~  195 (338)
T d1orra_         144 TCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMY  195 (338)
T ss_dssp             EETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEE
T ss_pred             cccccccCcccCCccccccccccccchhhhhhhhhhhcc---Cccccccccccee
Confidence                          1134679999999999988888877   4555555554443

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=3.9e-14  Score=111.48  Aligned_cols=152  Identities=16%  Similarity=0.180  Sum_probs=103.0

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      .|.++||||+|+||.+++++|.++|++|.+..|+.+++++.        ....+..+.+|+.|.     +.+.+.+.+  
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~--------~~~~~~~~~gD~~d~-----~~l~~al~~--   67 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQA-----ADVDKTVAG--   67 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSH-----HHHHHHHTT--
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc--------cccccccccccccch-----hhHHHHhcC--
Confidence            57899999999999999999999999999999998875421        134567889999875     455666665  


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCC--CCchhchH
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSD--PLYSVYAA  210 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~--~~~~~Y~a  210 (255)
                      .|++|+++|...+.    ..         .+++..+..++++    .+++++-.|+|++||......+..  +....|..
T Consensus        68 ~d~vi~~~g~~~~~----~~---------~~~~~~~~~~l~~----aa~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~  130 (205)
T d1hdoa_          68 QDAVIVLLGTRNDL----SP---------TTVMSEGARNIVA----AMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTD  130 (205)
T ss_dssp             CSEEEECCCCTTCC----SC---------CCHHHHHHHHHHH----HHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHH
T ss_pred             CCEEEEEeccCCch----hh---------hhhhHHHHHHHHH----HHHhcCCCeEEEEeeeeccCCCccccccccccch
Confidence            45999999975321    11         1223334444444    455666678999998765542211  12234555


Q ss_pred             HHHHHHHHHHHHHHHHccCCceEEEeeeeeeee
Q 025260          211 TKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCF  243 (255)
Q Consensus       211 sK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T  243 (255)
                      .|.+.+.       .++..|++...++||++..
T Consensus       131 ~~~~~e~-------~l~~~~~~~tiirp~~~~~  156 (205)
T d1hdoa_         131 DHIRMHK-------VLRESGLKYVAVMPPHIGD  156 (205)
T ss_dssp             HHHHHHH-------HHHHTCSEEEEECCSEEEC
T ss_pred             HHHHHHH-------HHHhcCCceEEEecceecC
Confidence            5554443       2344689999999998853

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.52  E-value=1.9e-14  Score=122.01  Aligned_cols=167  Identities=15%  Similarity=0.060  Sum_probs=116.0

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh---hhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP---DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      |.||||||+|-||.+++++|.++|++|.+++++.   ......   + +......+..+.+|+.|.     +.+.+.+..
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~---~-~~~~~~~i~~~~~Di~d~-----~~~~~~~~~   73 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKAN---L-EAILGDRVELVVGDIADA-----ELVDKLAAK   73 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGG---T-GGGCSSSEEEEECCTTCH-----HHHHHHHTT
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHH---H-HHhhcCCeEEEEccCCCH-----HHHHHHHhh
Confidence            6799999999999999999999998765554431   110000   0 111245788899999875     445555554


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC----------
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP----------  200 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~----------  200 (255)
                      .+  .++|.|+.....      ...++.++.+++|+.|+.+++..+...    + .++|+.||...+...          
T Consensus        74 ~~--~v~~~a~~~~~~------~~~~~~~~~~~~N~~g~~nll~~~~~~----~-~k~i~~ss~~vyg~~~~~~~~~~~~  140 (346)
T d1oc2a_          74 AD--AIVHYAAESHND------NSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVYGDLPLREDLPGHG  140 (346)
T ss_dssp             CS--EEEECCSCCCHH------HHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGGGSTTTT
T ss_pred             hh--hhhhhhhccccc------chhhCcccceeeehHhHHhhhhhhccc----c-ccccccccceEecccCccccccccc
Confidence            44  788888876431      112234567899999999999876442    2 467887776644310          


Q ss_pred             -----------CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          201 -----------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       201 -----------~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                                 +..+...|+.+|.+.+.+++..+++.   |+++.+++|+.+-.|.
T Consensus       141 ~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~  193 (346)
T d1oc2a_         141 EGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPY  193 (346)
T ss_dssp             CSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTT
T ss_pred             cCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCCC
Confidence                       11124679999999999999888775   8999999999998864

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.51  E-value=6e-14  Score=119.52  Aligned_cols=167  Identities=11%  Similarity=-0.010  Sum_probs=119.1

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      ++..||||||+|.||.+++++|.++|++|+.+++...+..      ...  ........+|+.+.     +.+.+.+.  
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~------~~~--~~~~~~~~~D~~~~-----~~~~~~~~--   78 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------TED--MFCDEFHLVDLRVM-----ENCLKVTE--   78 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS------CGG--GTCSEEEECCTTSH-----HHHHHHHT--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch------hhh--cccCcEEEeechhH-----HHHHHHhh--
Confidence            5677999999999999999999999999999987644311      001  11224455676653     34444444  


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC-----------
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP-----------  200 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~-----------  200 (255)
                      ++|++||.|+.....     ..+.+.....+..|+.++.+++.++..    .+-.++|++||...+...           
T Consensus        79 ~~d~Vih~a~~~~~~-----~~~~~~~~~~~~~n~~gt~~ll~~~~~----~~vk~~i~~SS~~~~~~~~~~~~~~~~~~  149 (363)
T d2c5aa1          79 GVDHVFNLAADMGGM-----GFIQSNHSVIMYNNTMISFNMIEAARI----NGIKRFFYASSACIYPEFKQLETTNVSLK  149 (363)
T ss_dssp             TCSEEEECCCCCCCH-----HHHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEEEEGGGSCGGGSSSSSSCEEC
T ss_pred             cCCeEeecccccccc-----cccccccccccccccchhhHHHHhHHh----hCccccccccccccccccccccccccccc
Confidence            456999999876431     111223466788999999998888654    444579999997765521           


Q ss_pred             -----CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCC
Q 025260          201 -----SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYN  245 (255)
Q Consensus       201 -----~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~  245 (255)
                           +..+...|+.||.+.+.+++...++.   |+++..++|+.+-.+.
T Consensus       150 ~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~  196 (363)
T d2c5aa1         150 ESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPF  196 (363)
T ss_dssp             GGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTT
T ss_pred             cccCCcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccC
Confidence                 01124579999999999999888776   8999999999998764

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.49  E-value=8e-13  Score=113.31  Aligned_cols=177  Identities=20%  Similarity=0.200  Sum_probs=123.6

Q ss_pred             CcEEEEECCCCchHHHHHHHHHH-cCCcEEEEeC---------ChhhHHHHHHHHHhh------cCCceEEEEEEECCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAK-TGLNLVLVGR---------NPDKLKDVSDSIQAK------YAKTQIKSVVVDFSGD  116 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~-~G~~V~l~~r---------~~~~~~~~~~~~~~~------~~~~~~~~~~~d~~~~  116 (255)
                      +..||||||+|.||.+++++|++ .|++|+++|+         ..+..+.....+...      .......++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            45799999999999999999986 6899999874         112233333333221      1234577889999985


Q ss_pred             cHHHHHHHHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccc
Q 025260          117 LDEGVERIKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAA  196 (255)
Q Consensus       117 ~~~~~~~~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~  196 (255)
                        +.++++.+..+  ++|+++|.|+.....      ...+.....+++|+.++..+++++..    .+..++++++|...
T Consensus        82 --~~l~~~~~~~~--~~d~ViH~Aa~~~~~------~~~~~~~~~~~~N~~~t~~~l~~~~~----~~~~~~~~~~s~~~  147 (383)
T d1gy8a_          82 --DFLNGVFTRHG--PIDAVVHMCAFLAVG------ESVRDPLKYYDNNVVGILRLLQAMLL----HKCDKIIFSSSAAI  147 (383)
T ss_dssp             --HHHHHHHHHSC--CCCEEEECCCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGG
T ss_pred             --HHhhhhhhccc--eeehhhccccccccc------ccccccccccccccccccccchhhhc----cCCccccccccccc
Confidence              45555555444  456999999976431      12233456788999999999888654    44456777776654


Q ss_pred             cccC----------------CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          197 IVIP----------------SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       197 ~~~~----------------~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                      ....                +..+...|+.||.+.+.+++.+...+   |+++.+++|+.+-.|..
T Consensus       148 ~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gl~~~~lR~~~vyG~~~  210 (383)
T d1gy8a_         148 FGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAHE  210 (383)
T ss_dssp             TBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCCT
T ss_pred             ccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh---CCCEEEEecceeeccCc
Confidence            4311                11235789999999999999888775   89999999999886654

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.49  E-value=5.4e-14  Score=118.02  Aligned_cols=170  Identities=20%  Similarity=0.142  Sum_probs=118.6

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEE------EeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVL------VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l------~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      .|+||||+|.||.+++++|.++|++|..      .+.......  ...+........+.+++.|..+.     .......
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~~   74 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGN--RANLAPVDADPRLRFVHGDIRDA-----GLLAREL   74 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCC--GGGGGGGTTCTTEEEEECCTTCH-----HHHHHHT
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCcccc--HhHhhhhhcCCCeEEEEeccccc-----hhhhccc
Confidence            5899999999999999999999986543      332211100  00111111245688899998864     2333333


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC--------
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP--------  200 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~--------  200 (255)
                      .  ++|.++|.|+....      ....+..+..+++|+.++.++++++..    .+..++|++||...+..+        
T Consensus        75 ~--~~d~vi~~a~~~~~------~~~~~~~~~~~~~N~~gt~~ll~~~~~----~~~~~~I~~Ss~~~yg~~~~~~~~E~  142 (322)
T d1r6da_          75 R--GVDAIVHFAAESHV------DRSIAGASVFTETNVQGTQTLLQCAVD----AGVGRVVHVSTNQVYGSIDSGSWTES  142 (322)
T ss_dssp             T--TCCEEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGCCCSSSCBCTT
T ss_pred             c--ccceEEeecccccc------cccccchHHHhhhhHHHHHHHHHHHHH----cCCceEEEeecceeecCCCCCCCCCC
Confidence            3  56699999987543      122333456788999999999998753    445689999998766521        


Q ss_pred             -CCCCchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          201 -SDPLYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       201 -~~~~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                       +..+...|+.||.+.+.+.+.++++.   |+++..++|+.+-.|..
T Consensus       143 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~  186 (322)
T d1r6da_         143 SPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQ  186 (322)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTC
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcCC
Confidence             11234689999999999999999876   89999999999988653

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=1.3e-13  Score=110.52  Aligned_cols=160  Identities=14%  Similarity=0.148  Sum_probs=112.5

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKE  126 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  126 (255)
                      ++.++|.|+||||+|.||.+++++|.++|.  +|++.+|++....+.      .  ...+....+|+.+.     +.+.+
T Consensus        10 ~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~------~--~~~i~~~~~D~~~~-----~~~~~   76 (232)
T d2bkaa1          10 FRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE------A--YKNVNQEVVDFEKL-----DDYAS   76 (232)
T ss_dssp             HHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG------G--GGGCEEEECCGGGG-----GGGGG
T ss_pred             hCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc------c--cceeeeeeeccccc-----ccccc
Confidence            345589999999999999999999999996  799999976543210      0  23455555666543     34555


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCch
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYS  206 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~  206 (255)
                      .+.+  .|+++|++|....         ........++|+.++..+++.+..    .+-.++|++||.....    ....
T Consensus        77 ~~~~--~d~vi~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~a~~----~~v~~fi~~Ss~~~~~----~~~~  137 (232)
T d2bkaa1          77 AFQG--HDVGFCCLGTTRG---------KAGAEGFVRVDRDYVLKSAELAKA----GGCKHFNLLSSKGADK----SSNF  137 (232)
T ss_dssp             GGSS--CSEEEECCCCCHH---------HHHHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCT----TCSS
T ss_pred             cccc--ccccccccccccc---------ccchhhhhhhcccccceeeecccc----cCccccccCCcccccc----Cccc
Confidence            5554  5599999986421         223455678899999998888643    4556799999977654    2346


Q ss_pred             hchHHHHHHHHHHHHHHHHHccCCc-eEEEeeeeeeeeCCcc
Q 025260          207 VYAATKAYIDQFSRSLYVEYRKSGI-DVQCQVLFLLCFYNLN  247 (255)
Q Consensus       207 ~Y~asK~al~~~~~~l~~e~~~~gi-~v~~v~Pg~v~T~~~~  247 (255)
                      .|..+|...+...       ...|. ++..++||.+-.+..+
T Consensus       138 ~Y~~~K~~~E~~l-------~~~~~~~~~IlRP~~i~G~~~~  172 (232)
T d2bkaa1         138 LYLQVKGEVEAKV-------EELKFDRYSVFRPGVLLCDRQE  172 (232)
T ss_dssp             HHHHHHHHHHHHH-------HTTCCSEEEEEECCEEECTTGG
T ss_pred             hhHHHHHHhhhcc-------ccccccceEEecCceeecCCCc
Confidence            7999998776533       23344 5788999999887543

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.38  E-value=3.2e-12  Score=101.52  Aligned_cols=168  Identities=14%  Similarity=0.011  Sum_probs=106.1

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCc--EEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLN--LVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~--V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      ++||||||+|.||++++++|+++|++  |+...|++++.++.         ...+..+.+|..+.     +.+.+.+.+ 
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~---------~~~~~~~~~d~~~~-----~~~~~~~~~-   68 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI---------GGEADVFIGDITDA-----DSINPAFQG-   68 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT---------TCCTTEEECCTTSH-----HHHHHHHTT-
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc---------cCCcEEEEeeeccc-----ccccccccc-
Confidence            68999999999999999999999975  56677887654422         23456788888875     445555664 


Q ss_pred             CccEEEEecCCCCCccc-------ccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCC
Q 025260          132 DVGVLINNVGISYPYAR-------FFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPL  204 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~-------~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~  204 (255)
                       +|.+||+|+.......       ...............+|+.+...+......    ...++....++.....  +...
T Consensus        69 -~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~s~~~~~~--~~~~  141 (252)
T d2q46a1          69 -IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV----AGVKHIVVVGSMGGTN--PDHP  141 (252)
T ss_dssp             -CSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHH----HTCSEEEEEEETTTTC--TTCG
T ss_pred             -ceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccc----ccccccccccccccCC--CCcc
Confidence             5599999987542110       011111223455677888888777766544    3446677777755544  2222


Q ss_pred             chhchHHH-HHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          205 YSVYAATK-AYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       205 ~~~Y~asK-~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                      ...+..++ .......+.+.   ...|+++..++||.+-.+..
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ilRp~~v~g~~~  181 (252)
T d2q46a1         142 LNKLGNGNILVWKRKAEQYL---ADSGTPYTIIRAGGLLDKEG  181 (252)
T ss_dssp             GGGGGGCCHHHHHHHHHHHH---HHSSSCEEEEEECEEECSCT
T ss_pred             cccccccchhhhhhhhhhhh---hcccccceeecceEEECCCc
Confidence            23333322 22223323333   33589999999999987653

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.18  E-value=6e-11  Score=93.12  Aligned_cols=150  Identities=12%  Similarity=0.092  Sum_probs=99.1

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|.++||||||.||++++++|.++|.  +|+...|++...            ..++   ..+..| .    .++.+....
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~------------~~~~---~~~~~d-~----~~~~~~~~~   61 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE------------HPRL---DNPVGP-L----AELLPQLDG   61 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC------------CTTE---ECCBSC-H----HHHGGGCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh------------cccc---cccccc-h----hhhhhcccc
Confidence            48899999999999999999999997  566666654210            1122   222222 1    222222222


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchH
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA  210 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~a  210 (255)
                       .+|++|+++|.....     ..+.   +...++|+.++..+++++.    +.+-.+++++||..+..    .....|..
T Consensus        62 -~~d~vi~~~g~~~~~-----~~~~---~~~~~~~~~~~~~~~~~a~----~~~v~~~i~~Ss~~~~~----~~~~~y~~  124 (212)
T d2a35a1          62 -SIDTAFCCLGTTIKE-----AGSE---EAFRAVDFDLPLAVGKRAL----EMGARHYLVVSALGADA----KSSIFYNR  124 (212)
T ss_dssp             -CCSEEEECCCCCHHH-----HSSH---HHHHHHHTHHHHHHHHHHH----HTTCCEEEEECCTTCCT----TCSSHHHH
T ss_pred             -chheeeeeeeeeccc-----cccc---cccccchhhhhhhcccccc----ccccccccccccccccc----ccccchhH
Confidence             467999999865321     1122   4567889999988888753    34556899999977654    33568999


Q ss_pred             HHHHHHHHHHHHHHHHccCCc-eEEEeeeeeeeeCCc
Q 025260          211 TKAYIDQFSRSLYVEYRKSGI-DVQCQVLFLLCFYNL  246 (255)
Q Consensus       211 sK~al~~~~~~l~~e~~~~gi-~v~~v~Pg~v~T~~~  246 (255)
                      +|...+...       ...+. +.+.++|+.+-.+..
T Consensus       125 ~K~~~E~~l-------~~~~~~~~~I~Rp~~v~G~~~  154 (212)
T d2a35a1         125 VKGELEQAL-------QEQGWPQLTIARPSLLFGPRE  154 (212)
T ss_dssp             HHHHHHHHH-------TTSCCSEEEEEECCSEESTTS
T ss_pred             HHHHHhhhc-------cccccccceeeCCcceeCCcc
Confidence            998766533       33344 588899999976643

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.17  E-value=7.6e-11  Score=95.95  Aligned_cols=146  Identities=16%  Similarity=0.103  Sum_probs=96.9

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG  134 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id  134 (255)
                      .+|||||||.||++++++|.++|++|+.++|++                       +|+.|.  +   .+.+.+.+.++|
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-----------------------~D~~d~--~---~~~~~l~~~~~d   54 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------------LDITNV--L---AVNKFFNEKKPN   54 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------------CCTTCH--H---HHHHHHHHHCCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-----------------------ccCCCH--H---HHHHHHHHcCCC
Confidence            489999999999999999999999999999863                       256654  2   333334334567


Q ss_pred             EEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC---------CCCCc
Q 025260          135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDPLY  205 (255)
Q Consensus       135 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~---------~~~~~  205 (255)
                      ++||+|+....      +.+....+..+..|......+.......     ...+++.||......+         +....
T Consensus        55 ~vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~~~~~~~~~-----~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~  123 (281)
T d1vl0a_          55 VVINCAAHTAV------DKCEEQYDLAYKINAIGPKNLAAAAYSV-----GAEIVQISTDYVFDGEAKEPITEFDEVNPQ  123 (281)
T ss_dssp             EEEECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHH-----TCEEEEEEEGGGSCSCCSSCBCTTSCCCCC
T ss_pred             EEEeecccccc------ccccccchhhcccccccccccccccccc-----cccccccccceeeeccccccccccccccch
Confidence            99999987542      1123334566777887777776665431     2356666665433321         11235


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                      ..|+.+|.+.+.+.+    +   .+.+...++|+.+-.+-.
T Consensus       124 ~~~~~~k~~~e~~~~----~---~~~~~~i~R~~~vyG~~~  157 (281)
T d1vl0a_         124 SAYGKTKLEGENFVK----A---LNPKYYIVRTAWLYGDGN  157 (281)
T ss_dssp             SHHHHHHHHHHHHHH----H---HCSSEEEEEECSEESSSS
T ss_pred             hhhhhhhhHHHHHHH----H---hCCCccccceeEEeCCCc
Confidence            678888877665442    2   367888899999976643

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.12  E-value=2.8e-10  Score=93.60  Aligned_cols=160  Identities=13%  Similarity=0.004  Sum_probs=92.0

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      .+.||||||+|.||++++++|.++|++|+++.|+.........+.........+..+.+|+.|.     +.+.+.+.+.+
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~-----~~~~~~~~~~~   77 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDH-----QRLVDALKQVD   77 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCH-----HHHHHHHTTCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccc-----hhhhhhccCcc
Confidence            3459999999999999999999999999999997643221111111111134567788888875     44555566544


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHHH
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAATK  212 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~asK  212 (255)
                        .++++++....                 ..|..+...++.++    .+....++++.||....... ......|..++
T Consensus        78 --~~~~~~~~~~~-----------------~~~~~~~~~~l~~a----~~~~~~~~v~~Ss~g~~~~~-~~~~~~~~~~~  133 (312)
T d1qyda_          78 --VVISALAGGVL-----------------SHHILEQLKLVEAI----KEAGNIKRFLPSEFGMDPDI-MEHALQPGSIT  133 (312)
T ss_dssp             --EEEECCCCSSS-----------------STTTTTHHHHHHHH----HHSCCCSEEECSCCSSCTTS-CCCCCSSTTHH
T ss_pred             --hhhhhhhhccc-----------------ccchhhhhHHHHHH----HHhcCCcEEEEeeccccCCC-cccccchhhhh
Confidence              78888765321                 11222333333333    23444567777765433211 11112233333


Q ss_pred             HHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          213 AYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       213 ~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                      .......+...   ...|+....++|+.+-.+
T Consensus       134 ~~~~~~~~~~~---~~~~~~~~i~r~~~~~g~  162 (312)
T d1qyda_         134 FIDKRKVRRAI---EAASIPYTYVSSNMFAGY  162 (312)
T ss_dssp             HHHHHHHHHHH---HHTTCCBCEEECCEEHHH
T ss_pred             hHHHHHHHHhh---cccccceEEeccceeecC
Confidence            33333333332   234788888999888654

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.10  E-value=5.8e-15  Score=114.82  Aligned_cols=172  Identities=13%  Similarity=0.054  Sum_probs=94.2

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEEC----------CCCcHHHHHHH
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF----------SGDLDEGVERI  124 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~----------~~~~~~~~~~~  124 (255)
                      ++.|+||+|+||+++|+.|++.|++|++.+|+++++++..+++....+.......+.+.          ........+..
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEHAIDTA   81 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEeeccccccchhhhhhhheeeeccchHH
Confidence            46788988999999999999999999999999999999999988765444333322111          11111122211


Q ss_pred             HHHhcCC-CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCC
Q 025260          125 KEAIEGL-DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDP  203 (255)
Q Consensus       125 ~~~~~~~-~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~  203 (255)
                      ....... ............               ......+..+.....+...+.+........+++.|.....  ..+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  144 (212)
T d1jaya_          82 RDLKNILREKIVVSPLVPVS---------------RGAKGFTYSSERSAAEIVAEVLESEKVVSALHTIPAARFA--NLD  144 (212)
T ss_dssp             HHTHHHHTTSEEEECCCCEE---------------CCTTCCEECCSSCHHHHHHHHHTCSCEEECCTTCCHHHHH--CTT
T ss_pred             HHhhhhhccccccccccccc---------------cccccccccccchhhhhhhhhhhhhcccccceeecHHHhc--Ccc
Confidence            1111100 100111111110               0111111111111122222323333333333344433333  223


Q ss_pred             CchhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeee
Q 025260          204 LYSVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCF  243 (255)
Q Consensus       204 ~~~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T  243 (255)
                      ....|..++++....++....|+...++.++.++||.+++
T Consensus       145 ~~~~~~~~~a~~~~~a~~~~~~~~~~~~g~~~~~~G~l~~  184 (212)
T d1jaya_         145 EKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAGPLSN  184 (212)
T ss_dssp             CCCCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEESGGG
T ss_pred             cccCccceEEeCCHHHHHHHHHHHhhCCCeEEEEeChHHH
Confidence            3456777777777778888778777778899999998885

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.05  E-value=1.1e-10  Score=95.61  Aligned_cols=129  Identities=17%  Similarity=0.164  Sum_probs=84.4

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG  134 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id  134 (255)
                      .+|||||+|-||.+++++|.++|. ++.++++...                   +..|++|.  +   .+.+.+.+.++|
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~-------------------~~~Dl~~~--~---~~~~~i~~~~~D   56 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE-------------------FCGDFSNP--K---GVAETVRKLRPD   56 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS-------------------SCCCTTCH--H---HHHHHHHHHCCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc-------------------ccCcCCCH--H---HHHHHHHHcCCC
Confidence            489999999999999999999986 4445544321                   22466654  2   333444444577


Q ss_pred             EEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccC---------CCCCc
Q 025260          135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIP---------SDPLY  205 (255)
Q Consensus       135 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~---------~~~~~  205 (255)
                      ++||+||......      +.+.-+..+++|+.+...+.+++..     .+.+++++||...+..+         +..+.
T Consensus        57 ~Vih~Aa~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~  125 (298)
T d1n2sa_          57 VIVNAAAHTAVDK------AESEPELAQLLNATSVEAIAKAANE-----TGAWVVHYSTDYVFPGTGDIPWQETDATSPL  125 (298)
T ss_dssp             EEEECCCCCCHHH------HTTCHHHHHHHHTHHHHHHHHHHTT-----TTCEEEEEEEGGGSCCCTTCCBCTTSCCCCS
T ss_pred             EEEEecccccccc------cccCccccccccccccccchhhhhc-----cccccccccccccccCCCCCCCccccccCCC
Confidence            9999999764311      1122356778999999988888643     34567887776544321         11124


Q ss_pred             hhchHHHHHHHHHH
Q 025260          206 SVYAATKAYIDQFS  219 (255)
Q Consensus       206 ~~Y~asK~al~~~~  219 (255)
                      ..|+.+|.+.+.+.
T Consensus       126 ~~y~~~k~~~e~~~  139 (298)
T d1n2sa_         126 NVYGKTKLAGEKAL  139 (298)
T ss_dssp             SHHHHHHHHHHHHH
T ss_pred             chHhhhhhhhhhhH
Confidence            68999998876544

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.01  E-value=3e-10  Score=93.22  Aligned_cols=164  Identities=19%  Similarity=0.188  Sum_probs=98.9

Q ss_pred             EEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG  134 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id  134 (255)
                      ||||||+|.||.+++++|+++|+ +|+++++-.+..+. . .+.+    ..+    +|..+ .++..+.........+++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~-~-~~~~----~~~----~~~~~-~~~~~~~~~~~~~~~~~~   70 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-V-NLVD----LNI----ADYMD-KEDFLIQIMAGEEFGDVE   70 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG-H-HHHT----SCC----SEEEE-HHHHHHHHHTTCCCSSCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchh-h-cccc----cch----hhhcc-chHHHHHHhhhhcccchh
Confidence            79999999999999999999997 68887643322111 0 1111    100    01111 122223333222222466


Q ss_pred             EEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCC---------CCCc
Q 025260          135 VLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPS---------DPLY  205 (255)
Q Consensus       135 ~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~---------~~~~  205 (255)
                      +++|.|+....     ...+.   +...+.|+.+...+.+.....    + -++++.||......+.         .+..
T Consensus        71 ~i~~~aa~~~~-----~~~~~---~~~~~~~~~~~~~~l~~~~~~----~-i~~v~~ss~~~~~~~~~~~~~~~~~~~~~  137 (307)
T d1eq2a_          71 AIFHEGACSST-----TEWDG---KYMMDNNYQYSKELLHYCLER----E-IPFLYASSAATYGGRTSDFIESREYEKPL  137 (307)
T ss_dssp             EEEECCSCCCT-----TCCCH---HHHHHHTHHHHHHHHHHHHHH----T-CCEEEEEEGGGGTTCCSCBCSSGGGCCCS
T ss_pred             hhhhhcccccc-----ccccc---ccccccccccccccccccccc----c-ccccccccccccccccccccccccccccc
Confidence            88888875432     12222   445677788887777765442    2 2355555555444221         1345


Q ss_pred             hhchHHHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCc
Q 025260          206 SVYAATKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNL  246 (255)
Q Consensus       206 ~~Y~asK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~  246 (255)
                      ..|+.+|.+.+.+.+.+..+   .++.+..++|..+-.|..
T Consensus       138 ~~Y~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~vyGp~~  175 (307)
T d1eq2a_         138 NVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPRE  175 (307)
T ss_dssp             SHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSC
T ss_pred             cccccccchhhhhccccccc---cccccccccceeEeeccc
Confidence            78999999999998887655   478999999999887643

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.98  E-value=1e-08  Score=86.09  Aligned_cols=153  Identities=13%  Similarity=0.024  Sum_probs=95.5

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      +.|+++||||+|.||.+++++|.++|++|+++.|+.++...  +++..   ...+..+..|+.|..    +.+.+.+.+.
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~---~~~v~~~~gD~~d~~----~~~~~a~~~~   72 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA---IPNVTLFQGPLLNNV----PLMDTLFEGA   72 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT---STTEEEEESCCTTCH----HHHHHHHTTC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcc---cCCCEEEEeeCCCcH----HHHHHHhcCC
Confidence            47999999999999999999999999999999998776432  22222   335778889988751    2234455654


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchHH
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAAT  211 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~as  211 (255)
                      +  .++.+.....       . .          |+....+++.++    .+.+..+++..||.......+......|..+
T Consensus        73 ~--~~~~~~~~~~-------~-~----------~~~~~~~~~~aa----~~agv~~~v~~Ss~~~~~~~~~~~~~~~~~~  128 (350)
T d1xgka_          73 H--LAFINTTSQA-------G-D----------EIAIGKDLADAA----KRAGTIQHYIYSSMPDHSLYGPWPAVPMWAP  128 (350)
T ss_dssp             S--EEEECCCSTT-------S-C----------HHHHHHHHHHHH----HHHSCCSEEEEEECCCGGGTSSCCCCTTTHH
T ss_pred             c--eEEeeccccc-------c-h----------hhhhhhHHHHHH----HHhCCCceEEEeeccccccCCcccchhhhhh
Confidence            5  5555432211       0 1          122233344443    2334446777777655442233344567788


Q ss_pred             HHHHHHHHHHHHHHHccCCceEEEeeeeeeeeC
Q 025260          212 KAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFY  244 (255)
Q Consensus       212 K~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~  244 (255)
                      |.....+.+       ..++....+.|+....+
T Consensus       129 k~~~~~~~~-------~~~~~~~~vr~~~~~~~  154 (350)
T d1xgka_         129 KFTVENYVR-------QLGLPSTFVYAGIYNNN  154 (350)
T ss_dssp             HHHHHHHHH-------TSSSCEEEEEECEEGGG
T ss_pred             HHHHHHHHH-------hhccCceeeeeceeecc
Confidence            876655433       33678888888876544

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.94  E-value=9.3e-09  Score=83.62  Aligned_cols=157  Identities=17%  Similarity=0.095  Sum_probs=91.2

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHH--HHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK--DVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|+||||||+|.||++++++|.++|++|++++|+.....  +..+.+.... ...+..+..|+.+.     ....+.+..
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~-----~~~~~~~~~   76 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDH-----ASLVEAVKN   76 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCH-----HHHHHHHHT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc-cCCcEEEEeecccc-----hhhhhhhhh
Confidence            577999999999999999999999999999999765422  1122222221 23456677787764     233444444


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhchH
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVYAA  210 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y~a  210 (255)
                      .+  .++++++....                     .+...+.++.    .+....++++.||.....  .......+..
T Consensus        77 ~~--~vi~~~~~~~~---------------------~~~~~~~~a~----~~~~~~~~~~~s~~~~~~--~~~~~~~~~~  127 (307)
T d1qyca_          77 VD--VVISTVGSLQI---------------------ESQVNIIKAI----KEVGTVKRFFPSEFGNDV--DNVHAVEPAK  127 (307)
T ss_dssp             CS--EEEECCCGGGS---------------------GGGHHHHHHH----HHHCCCSEEECSCCSSCT--TSCCCCTTHH
T ss_pred             ce--eeeeccccccc---------------------chhhHHHHHH----HHhccccceeeecccccc--cccccccccc
Confidence            34  88888865321                     0111222222    233344577776654333  2222333444


Q ss_pred             HHHHHHHHHHHHHHHHccCCceEEEeeeeeeeeCCcc
Q 025260          211 TKAYIDQFSRSLYVEYRKSGIDVQCQVLFLLCFYNLN  247 (255)
Q Consensus       211 sK~al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~  247 (255)
                      .+.......+....+   .|+....++|+.+-.+...
T Consensus       128 ~~~~~~~~~~~~~~~---~~~~~~i~r~~~v~g~~~~  161 (307)
T d1qyca_         128 SVFEVKAKVRRAIEA---EGIPYTYVSSNCFAGYFLR  161 (307)
T ss_dssp             HHHHHHHHHHHHHHH---HTCCBEEEECCEEHHHHTT
T ss_pred             ccccccccccchhhc---cCCCceecccceecCCCcc
Confidence            444333333333333   4788899999988765443

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=9.1e-07  Score=66.55  Aligned_cols=79  Identities=16%  Similarity=0.246  Sum_probs=59.9

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      +|++|+|+||+|++|...++-....|++|+++++++++.+.++    +.+ ...+    +|..+.  +..+++++..++.
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~----~~G-a~~v----i~~~~~--~~~~~i~~~t~~~   96 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL----QNG-AHEV----FNHREV--NYIDKIKKYVGEK   96 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTT-CSEE----EETTST--THHHHHHHHHCTT
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccccccccc----ccC-cccc----cccccc--cHHHHhhhhhccC
Confidence            4899999999999999999988889999999999877654432    222 2222    355543  6677888887777


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      .+|+++.+.|
T Consensus        97 g~d~v~d~~g  106 (174)
T d1yb5a2          97 GIDIIIEMLA  106 (174)
T ss_dssp             CEEEEEESCH
T ss_pred             CceEEeeccc
Confidence            7889998876

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=98.38  E-value=1.1e-06  Score=66.23  Aligned_cols=80  Identities=21%  Similarity=0.229  Sum_probs=61.4

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++|+|+||+|++|...++-....|++|+.+++++++.+..+    +.+  .+.   .+|-.++  +..+++++..++.
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~----~lG--a~~---vi~~~~~--d~~~~v~~~t~g~   96 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL----KAG--AWQ---VINYREE--DLVERLKEITGGK   96 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----HHT--CSE---EEETTTS--CHHHHHHHHTTTC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH----hcC--CeE---EEECCCC--CHHHHHHHHhCCC
Confidence            3899999999999999999999999999999999998876543    222  221   2354543  6667788777776


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      .+|+++.+.|.
T Consensus        97 g~d~v~d~~g~  107 (179)
T d1qora2          97 KVRVVYDSVGR  107 (179)
T ss_dssp             CEEEEEECSCG
T ss_pred             CeEEEEeCccH
Confidence            78899988873

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.35  E-value=8.7e-07  Score=66.90  Aligned_cols=105  Identities=20%  Similarity=0.157  Sum_probs=67.4

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .+|++|||+||+||+|...++-....|++|+.+++++++.+...    +.  +.+...   |-.+.    .++..+..++
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~----~l--Ga~~vi---~~~~~----~~~~~~~~~~   96 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR----VL--GAKEVL---AREDV----MAERIRPLDK   96 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH----HT--TCSEEE---ECC-------------CCS
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH----hc--ccceee---ecchh----HHHHHHHhhc
Confidence            34899999999999999998888889999999999988866443    22  222221   22211    1233344455


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccc
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIV  198 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~  198 (255)
                      ..+|+++.+.|...             ++               ..+..+  +.+||++.++...+..
T Consensus        97 ~gvD~vid~vgg~~-------------~~---------------~~l~~l--~~~Griv~~G~~~g~~  134 (176)
T d1xa0a2          97 QRWAAAVDPVGGRT-------------LA---------------TVLSRM--RYGGAVAVSGLTGGAE  134 (176)
T ss_dssp             CCEEEEEECSTTTT-------------HH---------------HHHHTE--EEEEEEEECSCCSSSC
T ss_pred             cCcCEEEEcCCchh-------------HH---------------HHHHHh--CCCceEEEeecccCcc
Confidence            57999999998431             11               222334  3469999999876655

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.31  E-value=1.4e-06  Score=65.88  Aligned_cols=79  Identities=18%  Similarity=0.200  Sum_probs=59.7

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      +|++|+|+||+|++|...+.-+...|++|+++++++++.+.    +++.+  ... +  .|-.++  +..+++++..++.
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~----l~~~G--a~~-v--i~~~~~--~~~~~v~~~t~~~   93 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM----LSRLG--VEY-V--GDSRSV--DFADEILELTDGY   93 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH----HHTTC--CSE-E--EETTCS--THHHHHHHHTTTC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccccc----ccccc--ccc-c--ccCCcc--CHHHHHHHHhCCC
Confidence            48999999999999999999888899999999998776543    33332  221 1  343443  6667888877776


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      .+|+++.+.|
T Consensus        94 g~d~v~d~~g  103 (183)
T d1pqwa_          94 GVDVVLNSLA  103 (183)
T ss_dssp             CEEEEEECCC
T ss_pred             CEEEEEeccc
Confidence            7999999887

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.29  E-value=9.6e-07  Score=66.94  Aligned_cols=79  Identities=14%  Similarity=0.150  Sum_probs=57.0

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      +|++|+|+||+||+|.+.++-....|++|+.+++++++.+...    +.+  ....   +|-.++  +..+.+.+..+..
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~----~~G--a~~v---i~~~~~--~~~~~~~~~~~~~   97 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK----QIG--FDAA---FNYKTV--NSLEEALKKASPD   97 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTT--CSEE---EETTSC--SCHHHHHHHHCTT
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHH----hhh--hhhh---cccccc--cHHHHHHHHhhcC
Confidence            5999999999999999999999999999999999987654332    222  2221   233332  3335555555665


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      .+|+++++.|
T Consensus        98 Gvd~v~D~vG  107 (182)
T d1v3va2          98 GYDCYFDNVG  107 (182)
T ss_dssp             CEEEEEESSC
T ss_pred             CCceeEEecC
Confidence            7889999887

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.23  E-value=3.5e-06  Score=62.88  Aligned_cols=82  Identities=27%  Similarity=0.332  Sum_probs=57.7

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECC-CCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS-GDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~~~~~  130 (255)
                      .|.+|+|+| +|++|...+.-+...|++|+++++++++++.+.+    .  ..... +..|.. ++..+..+++.+..++
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~----~--ga~~~-~~~~~~~~~~~~~~~~~~~~~g~   97 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----C--GADVT-LVVDPAKEEESSIIERIRSAIGD   97 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----T--TCSEE-EECCTTTSCHHHHHHHHHHHSSS
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH----c--CCcEE-Eeccccccccchhhhhhhccccc
Confidence            478999997 6899999999888999999999999988765433    2  22222 223333 2344555666665554


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                       .+|++|.++|.
T Consensus        98 -g~D~vid~~g~  108 (170)
T d1e3ja2          98 -LPNVTIDCSGN  108 (170)
T ss_dssp             -CCSEEEECSCC
T ss_pred             -CCceeeecCCC
Confidence             67799999874

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.14  E-value=6.4e-06  Score=62.31  Aligned_cols=85  Identities=18%  Similarity=0.285  Sum_probs=60.4

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHH---HHHhhcCCceEEEEEEECCCCcHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSD---SIQAKYAKTQIKSVVVDFSGDLDEGVER  123 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~  123 (255)
                      ..++++|.|+|.|+ ||.|++++..|++.|. ++++.+|+.+..++...   ++.+.+   .......|..+.     +.
T Consensus        13 ~~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~-----~~   83 (182)
T d1vi2a1          13 GFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT---DCVVTVTDLADQ-----QA   83 (182)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS---SCEEEEEETTCH-----HH
T ss_pred             CCCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhc---CcceEeeecccc-----cc
Confidence            44677999999999 6999999999999998 79999999876665443   444433   234556666654     34


Q ss_pred             HHHHhcCCCccEEEEecCCC
Q 025260          124 IKEAIEGLDVGVLINNVGIS  143 (255)
Q Consensus       124 ~~~~~~~~~id~lv~nag~~  143 (255)
                      +.+....  .|++||+....
T Consensus        84 ~~~~~~~--~diiIN~Tp~G  101 (182)
T d1vi2a1          84 FAEALAS--ADILTNGTKVG  101 (182)
T ss_dssp             HHHHHHT--CSEEEECSSTT
T ss_pred             hhhhhcc--cceeccccCCc
Confidence            4444554  45999987653

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=98.07  E-value=4.3e-05  Score=57.41  Aligned_cols=81  Identities=16%  Similarity=0.312  Sum_probs=59.4

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC-CcHHHHHHHHHHhc
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG-DLDEGVERIKEAIE  129 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~  129 (255)
                      +|++|+|+|+ |++|...+.-+...|+ +|+++++++++++.+ +++     +...   ..|..+ +..+..+.+.+..+
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~~---vi~~~~~~~~~~~~~i~~~~~   97 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEI-----GADL---TLNRRETSVEERRKAIMDITH   97 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHT-----TCSE---EEETTTSCHHHHHHHHHHHTT
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccc-ccc-----cceE---EEeccccchHHHHHHHHHhhC
Confidence            4899999997 8999999999989998 799999999887644 222     2221   234444 33455566777666


Q ss_pred             CCCccEEEEecCC
Q 025260          130 GLDVGVLINNVGI  142 (255)
Q Consensus       130 ~~~id~lv~nag~  142 (255)
                      +..+|++|.++|.
T Consensus        98 ~~g~Dvvid~vG~  110 (182)
T d1vj0a2          98 GRGADFILEATGD  110 (182)
T ss_dssp             TSCEEEEEECSSC
T ss_pred             CCCceEEeecCCc
Confidence            6578899999875

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=98.03  E-value=7.6e-06  Score=62.20  Aligned_cols=87  Identities=21%  Similarity=0.273  Sum_probs=57.6

Q ss_pred             Cc-EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           53 GS-WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        53 gk-~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      |+ +++++||+||+|.+.++-.-..|++|+.+.|+.++.++..+.+++.+... +...+.+...+..+.++++.+..++ 
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~-vi~~~~~~~~~~~~~v~~~~~~~g~-  106 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQ-VITEDQNNSREFGPTIKEWIKQSGG-  106 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSE-EEEHHHHHCGGGHHHHHHHHHHHTC-
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccE-EEeccccchhHHHHHHHHHHhhccC-
Confidence            54 55558999999999988888899999999999888888887777765332 2211111122223333444333333 


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      ++|+++++.|
T Consensus       107 ~vdvv~D~vg  116 (189)
T d1gu7a2         107 EAKLALNCVG  116 (189)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            6789998876

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.93  E-value=4.2e-05  Score=56.74  Aligned_cols=80  Identities=15%  Similarity=0.152  Sum_probs=58.3

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++++|.|++|++|...+..+...|+ +|+++++++++++...+    .  +.+.   ..|..++  +..+++.+..+.
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~----~--Ga~~---~i~~~~~--~~~~~~~~~~~~   95 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR----A--GADY---VINASMQ--DPLAEIRRITES   95 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH----H--TCSE---EEETTTS--CHHHHHHHHTTT
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH----c--CCce---eeccCCc--CHHHHHHHHhhc
Confidence            489999999999999999999988895 89999999877655432    2  2221   2233333  555667776666


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                      ..+|+++.++|.
T Consensus        96 ~~~d~vid~~g~  107 (170)
T d1jvba2          96 KGVDAVIDLNNS  107 (170)
T ss_dssp             SCEEEEEESCCC
T ss_pred             ccchhhhccccc
Confidence            578899998874

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.92  E-value=1e-05  Score=52.03  Aligned_cols=42  Identities=24%  Similarity=0.316  Sum_probs=37.5

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~   93 (255)
                      +|+.++|+||+||+|.....-+...|++|+.+.+++++.+-.
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            488999999999999999998888999999999998876644

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.88  E-value=5.5e-05  Score=55.68  Aligned_cols=74  Identities=16%  Similarity=0.335  Sum_probs=55.3

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      +++++.++|.|+ |++|..+++.|..+|+ ++.++.|+.++.++..+++.     ...  .      +.    +++.+.+
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~-----~~~--~------~~----~~~~~~l   82 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG-----GEA--V------RF----DELVDHL   82 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT-----CEE--C------CG----GGHHHHH
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh-----ccc--c------cc----hhHHHHh
Confidence            356999999998 9999999999999998 69999999988887766652     111  1      11    2445555


Q ss_pred             cCCCccEEEEecCCC
Q 025260          129 EGLDVGVLINNVGIS  143 (255)
Q Consensus       129 ~~~~id~lv~nag~~  143 (255)
                      .+.|  ++|++.+..
T Consensus        83 ~~~D--ivi~atss~   95 (159)
T d1gpja2          83 ARSD--VVVSATAAP   95 (159)
T ss_dssp             HTCS--EEEECCSSS
T ss_pred             ccCC--EEEEecCCC
Confidence            5444  999988754

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.83  E-value=3.7e-05  Score=57.12  Aligned_cols=43  Identities=16%  Similarity=0.223  Sum_probs=38.5

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHH
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDS   96 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~   96 (255)
                      +|.|+|.|| |.+|+.+|+.|+++|++|++.+|+.++.++..++
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~   44 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG   44 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhc
Confidence            688999887 9999999999999999999999999988876543

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=5.1e-05  Score=56.37  Aligned_cols=81  Identities=17%  Similarity=0.211  Sum_probs=56.0

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|.+|+|.|+ |++|...+.-+...|+ +|+++++++++++.++ ++     +.+. .+. ...++..+..+.+....+.
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~-----Ga~~-~~~-~~~~~~~~~~~~~~~~~g~   96 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI-----GADL-VLQ-ISKESPQEIARKVEGQLGC   96 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-----TCSE-EEE-CSSCCHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-Hh-----CCcc-ccc-ccccccccccccccccCCC
Confidence            3789999987 9999999999999999 7999999988877543 22     2221 111 2223334555556665554


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                       .+|++|.++|.
T Consensus        97 -g~Dvvid~~G~  107 (171)
T d1pl8a2          97 -KPEVTIECTGA  107 (171)
T ss_dssp             -CCSEEEECSCC
T ss_pred             -CceEEEeccCC
Confidence             67799998874

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.79  E-value=3.6e-05  Score=57.36  Aligned_cols=42  Identities=21%  Similarity=0.291  Sum_probs=37.3

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~   93 (255)
                      +|++|+|+||+|++|...+.-+...|++|+.+++++++.+..
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~   68 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP   68 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccccccccccccccccc
Confidence            589999999999999999988888999999999998776544

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.78  E-value=5.3e-05  Score=56.61  Aligned_cols=79  Identities=16%  Similarity=0.180  Sum_probs=57.4

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      +|.+|+|.|+ ||+|...+..+...|+ +|+++++++++++.+. ++     +...   .+|..++  +..+++.+..++
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~l-----Ga~~---~i~~~~~--~~~~~v~~~t~g   94 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FY-----GATD---ILNYKNG--HIEDQVMKLTNG   94 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HH-----TCSE---EECGGGS--CHHHHHHHHTTT
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hh-----Cccc---cccccch--hHHHHHHHHhhc
Confidence            4888999986 8999999988888998 7999999988766543 23     2211   2233332  455677777766


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                      ..+|++|.++|.
T Consensus        95 ~G~D~vid~~g~  106 (174)
T d1jqba2          95 KGVDRVIMAGGG  106 (174)
T ss_dssp             SCEEEEEECSSC
T ss_pred             cCcceEEEccCC
Confidence            678899999985

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.76  E-value=7.6e-06  Score=61.01  Aligned_cols=42  Identities=29%  Similarity=0.320  Sum_probs=37.0

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~   93 (255)
                      +|++|||+||+||+|...++-....|++|+.+++++++.+.+
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~   64 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL   64 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH
Confidence            367899999999999999987778999999999998886654

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.74  E-value=6.4e-05  Score=56.78  Aligned_cols=78  Identities=19%  Similarity=0.231  Sum_probs=52.3

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEE-EeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVL-VGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      +++|||+||+||+|...++-.-..|+++++ +++++++..+..+++     +.+   ...|..++  +..+.+++..+ .
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~-----gad---~vi~~~~~--~~~~~~~~~~~-~   99 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL-----GFD---AAVNYKTG--NVAEQLREACP-G   99 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS-----CCS---EEEETTSS--CHHHHHHHHCT-T
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc-----cce---EEeeccch--hHHHHHHHHhc-c
Confidence            589999999999999998888779997554 566666555544433     222   22344443  44555665544 3


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      .+|+++.+.|
T Consensus       100 GvDvv~D~vG  109 (187)
T d1vj1a2         100 GVDVYFDNVG  109 (187)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEecCC
Confidence            5889998886

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.55  E-value=0.00025  Score=52.65  Aligned_cols=78  Identities=23%  Similarity=0.288  Sum_probs=56.7

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      +..++||.|+|.|+ ||-+++++..|.+.+.+|.++.|+.++.++..+.+....   .+.....|..             
T Consensus        13 ~~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~---~~~~~~~~~~-------------   75 (171)
T d1p77a1          13 NWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG---NIQAVSMDSI-------------   75 (171)
T ss_dssp             TCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS---CEEEEEGGGC-------------
T ss_pred             CCCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc---ccchhhhccc-------------
Confidence            34567999999876 788999999999988899999999999998888776432   2333222211             


Q ss_pred             hcCCCccEEEEecCCC
Q 025260          128 IEGLDVGVLINNVGIS  143 (255)
Q Consensus       128 ~~~~~id~lv~nag~~  143 (255)
                       ...+.|++||+....
T Consensus        76 -~~~~~diiIN~tp~g   90 (171)
T d1p77a1          76 -PLQTYDLVINATSAG   90 (171)
T ss_dssp             -CCSCCSEEEECCCC-
T ss_pred             -cccccceeeeccccc
Confidence             112566999998765

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.55  E-value=0.00017  Score=53.69  Aligned_cols=80  Identities=19%  Similarity=0.224  Sum_probs=54.2

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      +|.+|+|.|+ +|+|...+..+...|+ +|+++++++++.+...+.      .....   .|..+. ++..+...+....
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~------Ga~~~---i~~~~~-~~~~~~~~~~~~~   96 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV------GATEC---VNPQDY-KKPIQEVLTEMSN   96 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT------TCSEE---ECGGGC-SSCHHHHHHHHTT
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHh------CCeeE---EecCCc-hhHHHHHHHHHhc
Confidence            4899999999 7899999999999986 899999999987654321      22211   222221 1333444444444


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                      ..+|++|.+.|.
T Consensus        97 ~G~D~vid~~G~  108 (176)
T d2jhfa2          97 GGVDFSFEVIGR  108 (176)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEecCCc
Confidence            467899998885

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.54  E-value=8e-05  Score=55.33  Aligned_cols=52  Identities=12%  Similarity=0.258  Sum_probs=45.4

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhh
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAK  100 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~  100 (255)
                      ...++||.|+|.|+ ||-+++++..|.+.|++|.+..|+.++.++..+.+.+.
T Consensus        13 ~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~   64 (170)
T d1nyta1          13 SFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT   64 (170)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG
T ss_pred             CCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhc
Confidence            45567999999997 89999999999999999999999999988887776553

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.53  E-value=0.00035  Score=51.83  Aligned_cols=78  Identities=19%  Similarity=0.244  Sum_probs=54.0

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcE-EEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNL-VLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V-~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|.+|+|.|+ |++|...+.-+...|+++ +++++++++++.++ ++   + ...  +  .|..++  +..+++++..++
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~---G-a~~--~--i~~~~~--~~~~~i~~~t~g   95 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QL---G-ATH--V--INSKTQ--DPVAAIKEITDG   95 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HH---T-CSE--E--EETTTS--CHHHHHHHHTTS
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-Hc---C-CeE--E--EeCCCc--CHHHHHHHHcCC
Confidence            4889999997 899999998888889865 56677877666543 22   1 221  2  344433  556667766555


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                       .+|++|.+.|.
T Consensus        96 -g~D~vid~~G~  106 (174)
T d1f8fa2          96 -GVNFALESTGS  106 (174)
T ss_dssp             -CEEEEEECSCC
T ss_pred             -CCcEEEEcCCc
Confidence             68899999884

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.49  E-value=0.00015  Score=56.38  Aligned_cols=79  Identities=16%  Similarity=0.144  Sum_probs=56.8

Q ss_pred             ccCCcEEEEECC----------------CCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEEC
Q 025260           50 RKYGSWALVTGP----------------TDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDF  113 (255)
Q Consensus        50 ~~~gk~vlITGa----------------s~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~  113 (255)
                      +++|+.||||+|                ||-.|.++|+++.++|++|.++.......           +...+..+.+  
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~-----------~p~~~~~~~~--   69 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP-----------TPPFVKRVDV--   69 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC-----------CCTTEEEEEC--
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC-----------ccccccccee--
Confidence            467999999985                68899999999999999999987654310           1222333333  


Q ss_pred             CCCcHHHHHHHHHHhcCCCccEEEEecCCCC
Q 025260          114 SGDLDEGVERIKEAIEGLDVGVLINNVGISY  144 (255)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~id~lv~nag~~~  144 (255)
                       ...++..+.+.+.++..|  ++|.+|++..
T Consensus        70 -~t~~~m~~~~~~~~~~~D--~~i~aAAvsD   97 (223)
T d1u7za_          70 -MTALEMEAAVNASVQQQN--IFIGCAAVAD   97 (223)
T ss_dssp             -CSHHHHHHHHHHHGGGCS--EEEECCBCCS
T ss_pred             -hhhHHHHHHHHhhhccce--eEeeeechhh
Confidence             234566677777777655  9999999865

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.46  E-value=9.1e-05  Score=55.48  Aligned_cols=42  Identities=24%  Similarity=0.316  Sum_probs=37.0

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~   93 (255)
                      ++++++|+||+||+|...++-....|++|+.+++++++.+.+
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~   72 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence            356899999999999999888888999999999999886544

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.41  E-value=0.00035  Score=52.05  Aligned_cols=81  Identities=20%  Similarity=0.290  Sum_probs=54.5

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      .+|.+|+|.|+ ||+|...+..+...|+ +|+++++++++++-+++ +     +.+..+   |..+. +...+.+.+...
T Consensus        28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-~-----GA~~~i---n~~~~-~~~~~~~~~~~~   96 (176)
T d1d1ta2          28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-V-----GATECI---SPKDS-TKPISEVLSEMT   96 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-H-----TCSEEE---CGGGC-SSCHHHHHHHHH
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-c-----CCcEEE---Ccccc-chHHHHHHHHhc
Confidence            34899999986 8999999999999996 89999999998875433 2     222221   22221 111233444444


Q ss_pred             CCCccEEEEecCC
Q 025260          130 GLDVGVLINNVGI  142 (255)
Q Consensus       130 ~~~id~lv~nag~  142 (255)
                      ...+|++|.+.|.
T Consensus        97 g~G~d~vi~~~g~  109 (176)
T d1d1ta2          97 GNNVGYTFEVIGH  109 (176)
T ss_dssp             TSCCCEEEECSCC
T ss_pred             cccceEEEEeCCc
Confidence            4467799998875

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.39  E-value=0.0012  Score=47.53  Aligned_cols=113  Identities=16%  Similarity=0.259  Sum_probs=65.1

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcC--CcEEEEeCChhhHHHHHHHHHhhcC-CceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYA-KTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G--~~V~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      .+.+.|.|+ |.+|..+|..|+.+|  .+|++.|++++..+....++..... .........|   .         ++..
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d---~---------~~~~   71 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGE---Y---------SDCK   71 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECC---G---------GGGT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeecc---H---------HHhc
Confidence            456777885 999999999999988  4899999999877766666654211 1111222111   1         2233


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEEC
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIG  192 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vs  192 (255)
                        +-|++|..||.....     ..+.   .+.+..|    ..+.+...+.+.+.. ++.++++|
T Consensus        72 --~adivvitag~~~~~-----g~~r---~~l~~~N----~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          72 --DADLVVITAGAPQKP-----GESR---LDLVNKN----LNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             --TCSEEEECCCC------------------CHHHH----HHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             --cccEEEEecccccCC-----CCCH---HHHHHHH----HHHHHHHHHHHhhcCCCcEEEEeC
Confidence              455999999864321     1121   2334444    345566666565554 45555554

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.38  E-value=0.00044  Score=48.82  Aligned_cols=70  Identities=21%  Similarity=0.287  Sum_probs=51.3

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG  134 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id  134 (255)
                      .++|.|+ |.+|+.++++|.++|.+|++++++++..++..+++       ....+..|.++.      .+.+..+-.+.|
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~-------~~~vi~Gd~~~~------~~l~~~~i~~a~   67 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-------DALVINGDCTKI------KTLEDAGIEDAD   67 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-------SSEEEESCTTSH------HHHHHTTTTTCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh-------hhhhccCcccch------hhhhhcChhhhh
Confidence            5889998 99999999999999999999999998877654431       235677888874      344443333455


Q ss_pred             EEEE
Q 025260          135 VLIN  138 (255)
Q Consensus       135 ~lv~  138 (255)
                      .++.
T Consensus        68 ~vv~   71 (132)
T d1lssa_          68 MYIA   71 (132)
T ss_dssp             EEEE
T ss_pred             hhcc
Confidence            6664

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.37  E-value=0.004  Score=44.53  Aligned_cols=114  Identities=23%  Similarity=0.331  Sum_probs=67.2

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChh--hHHHHHHHHHhhcC--CceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPD--KLKDVSDSIQAKYA--KTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~--~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      .+.|.||+|.+|.++|..++.+|.  ++++.+++++  +++....++.....  .......... +++        .+.+
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~-~~d--------~~~l   72 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES-DEN--------LRII   72 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE-TTC--------GGGG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCC-cch--------HHHh
Confidence            488999999999999999999993  8999998863  34444555554211  1122221111 111        1233


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEE
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNI  191 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~v  191 (255)
                      .  +-|++|.+||....     ...+..+   .++.|    ..+++...+.+.+..+..|+.+
T Consensus        73 ~--~aDvVVitAG~~~~-----~g~sR~d---l~~~N----a~iv~~i~~~i~~~~~~~iivV  121 (145)
T d1hyea1          73 D--ESDVVIITSGVPRK-----EGMSRMD---LAKTN----AKIVGKYAKKIAEICDTKIFVI  121 (145)
T ss_dssp             T--TCSEEEECCSCCCC-----TTCCHHH---HHHHH----HHHHHHHHHHHHHHCCCEEEEC
T ss_pred             c--cceEEEEecccccC-----CCCChhh---hhhhh----HHHHHHHHHHHhccCCCeEEEE
Confidence            4  45599999997432     1234332   33333    4456666666665554555545

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.36  E-value=0.00063  Score=49.85  Aligned_cols=41  Identities=22%  Similarity=0.414  Sum_probs=35.6

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~   93 (255)
                      +|++|+|.|+ |++|...+.-+...|++|+++++++++++..
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a   67 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELA   67 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhh
Confidence            3889999886 9999998888888999999999998887644

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.35  E-value=0.0012  Score=47.94  Aligned_cols=122  Identities=15%  Similarity=0.150  Sum_probs=70.8

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcC--CceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYA--KTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      +.+.+.|.|+ |.+|..+|..++..+. ++++.|.+++.++....++.....  +..... ..  +++       ..+.+
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~-~~--~~~-------~~~~~   74 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSV-RA--EYS-------YEAAL   74 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCE-EE--ECS-------HHHHH
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEE-ec--cCc-------hhhhh
Confidence            3566777897 9999999999998884 899999999877766666654211  111111 11  111       12334


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECC
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGS  193 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS  193 (255)
                      .  +-|++|..+|.......+-.+.+.   ...+..|    ..+++...+.+.+.. ++.++++|.
T Consensus        75 ~--~adiVvitag~~~~~g~~~~~~tR---~~l~~~n----~~iv~~i~~~i~~~~p~aiviivsN  131 (154)
T d1pzga1          75 T--GADCVIVTAGLTKVPGKPDSEWSR---NDLLPFN----SKIIREIGQNIKKYCPKTFIIVVTN  131 (154)
T ss_dssp             T--TCSEEEECCSCSSCTTCCGGGCCG---GGGHHHH----HHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             c--CCCeEEEecccccCCCCCCcccch---hhhhhhh----HHHHHHHHHHHHhcCCCcEEEEeCC
Confidence            4  344999999986432221122232   2223333    445566666565544 566666654

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=97.35  E-value=0.0007  Score=49.97  Aligned_cols=78  Identities=22%  Similarity=0.277  Sum_probs=53.3

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|++|+|.|+ |++|...+..+...|+ +|+.+++++++++...+    .+ ..  ..  .|-.+   +..++..+..+.
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~----~g-a~--~~--i~~~~---~~~~~~~~~~~~   98 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER----LG-AD--HV--VDARR---DPVKQVMELTRG   98 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH----TT-CS--EE--EETTS---CHHHHHHHHTTT
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh----cc-cc--ee--ecCcc---cHHHHHHHhhCC
Confidence            3889999986 9999999888888887 67778888877654432    22 22  11  23333   334555555555


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                      ..+|++|.++|.
T Consensus        99 ~g~d~vid~~g~  110 (172)
T d1h2ba2          99 RGVNVAMDFVGS  110 (172)
T ss_dssp             CCEEEEEESSCC
T ss_pred             CCceEEEEecCc
Confidence            578899999985

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=97.34  E-value=0.00031  Score=52.24  Aligned_cols=81  Identities=19%  Similarity=0.184  Sum_probs=53.8

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      ..|++|+|.|+ ||+|...+..+...|+ +|+++++++++++.+.+ +     +.+..   .|..+. +...+++.+...
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-l-----Ga~~~---i~~~~~-d~~~~~~~~~~~   94 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-L-----GATEC---LNPKDY-DKPIYEVICEKT   94 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-T-----TCSEE---ECGGGC-SSCHHHHHHHHT
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-c-----CCcEE---EcCCCc-hhHHHHHHHHhc
Confidence            34899999986 8999999999999997 79999999998875532 2     22221   232221 122233434443


Q ss_pred             CCCccEEEEecCC
Q 025260          130 GLDVGVLINNVGI  142 (255)
Q Consensus       130 ~~~id~lv~nag~  142 (255)
                      +..+|++|.++|.
T Consensus        95 ~~G~d~vid~~g~  107 (174)
T d1p0fa2          95 NGGVDYAVECAGR  107 (174)
T ss_dssp             TSCBSEEEECSCC
T ss_pred             CCCCcEEEEcCCC
Confidence            3367799998874

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.33  E-value=0.00029  Score=52.53  Aligned_cols=51  Identities=25%  Similarity=0.461  Sum_probs=44.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcC
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYA  102 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~  102 (255)
                      +++||.|+|.|+ ||.+++++..|.+.| +|.+..|+.++.++..+++.+...
T Consensus        15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~   65 (177)
T d1nvta1          15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLN   65 (177)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHT
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhc
Confidence            467999999976 689999999998877 999999999999999888876543

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=97.28  E-value=0.00093  Score=50.50  Aligned_cols=80  Identities=20%  Similarity=0.204  Sum_probs=55.8

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|.+|+|.|+ |++|...+..+...|+ +|+++++++++++.+.+    .  +...   ..|-.+  ++..+++.+..++
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~----~--Ga~~---~~~~~~--~~~~~~i~~~t~g   92 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----Q--GFEI---ADLSLD--TPLHEQIAALLGE   92 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----T--TCEE---EETTSS--SCHHHHHHHHHSS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhh----c--cccE---EEeCCC--cCHHHHHHHHhCC
Confidence            4899999986 8999888887777887 78899999887765432    1  2221   122222  2555667776666


Q ss_pred             CCccEEEEecCCC
Q 025260          131 LDVGVLINNVGIS  143 (255)
Q Consensus       131 ~~id~lv~nag~~  143 (255)
                      ..+|++|.+.|..
T Consensus        93 ~g~D~vid~vG~~  105 (195)
T d1kola2          93 PEVDCAVDAVGFE  105 (195)
T ss_dssp             SCEEEEEECCCTT
T ss_pred             CCcEEEEECcccc
Confidence            6788999999853

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.28  E-value=0.0023  Score=46.05  Aligned_cols=114  Identities=16%  Similarity=0.261  Sum_probs=69.8

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhcC--CceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYA--KTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      ++.+.|.|| |.+|..+|..++.+|.  ++++.|++++.++....++.....  .........|   .         +.+
T Consensus         6 ~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d---~---------~~l   72 (148)
T d1ldna1           6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGD---Y---------DDC   72 (148)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECC---G---------GGT
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECC---H---------HHh
Confidence            677888897 9999999999999884  799999999887777777765321  1112221111   1         223


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECC
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGS  193 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS  193 (255)
                      .  +-|++|.++|.....     ..+.   .+.+..|    ..+.+.+.+.+.+. .++.++++|.
T Consensus        73 ~--daDvvvitag~~~~~-----~~~R---~dl~~~N----~~i~~~i~~~i~~~~p~a~~ivvtN  124 (148)
T d1ldna1          73 R--DADLVVICAGANQKP-----GETR---LDLVDKN----IAIFRSIVESVMASGFQGLFLVATN  124 (148)
T ss_dssp             T--TCSEEEECCSCCCCT-----TTCS---GGGHHHH----HHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred             c--cceeEEEeccccccc-----Ccch---hHHHHHH----HHHHHHHHHHHHhhCCCceEEEecC
Confidence            3  345999999975321     1111   1223333    44555556555543 4566777654

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=97.28  E-value=0.00041  Score=51.58  Aligned_cols=80  Identities=16%  Similarity=0.182  Sum_probs=52.5

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|.+|+|.|+ ||||...+..+...|+ +|+++++++++++-.. ++     +... .  .|..+. ++..+.+.+....
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~-~~-----Ga~~-~--i~~~~~-~~~~~~~~~~~~~   96 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-AL-----GATD-C--LNPREL-DKPVQDVITELTA   96 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCSE-E--ECGGGC-SSCHHHHHHHHHT
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHH-Hh-----CCCc-c--cCCccc-hhhhhhhHhhhhc
Confidence            4899999975 9999999999999998 5888899988765332 22     2221 1  222211 1223344444444


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                      ..+|++|.++|.
T Consensus        97 ~G~d~vie~~G~  108 (174)
T d1e3ia2          97 GGVDYSLDCAGT  108 (174)
T ss_dssp             SCBSEEEESSCC
T ss_pred             CCCcEEEEeccc
Confidence            478899999984

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.19  E-value=0.00075  Score=49.82  Aligned_cols=80  Identities=18%  Similarity=0.159  Sum_probs=50.6

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|.+|+|.|+ +|+|...+..+...|+ +|+.+++++++++. .+++     +... .  .|..+..+...+.++ ....
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~-ak~l-----Ga~~-~--i~~~~~~~~~~~~~~-~~~~   96 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFAR-AKEF-----GATE-C--INPQDFSKPIQEVLI-EMTD   96 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH-HHHH-----TCSE-E--ECGGGCSSCHHHHHH-HHTT
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHH-HHHh-----CCcE-E--EeCCchhhHHHHHHH-HHcC
Confidence            4899999998 5999999999999997 57777787777653 3333     2222 1  222221112223333 3333


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                      ..+|+++.+.|.
T Consensus        97 ~g~D~vid~~G~  108 (176)
T d2fzwa2          97 GGVDYSFECIGN  108 (176)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCcEeeecCCC
Confidence            368899999874

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.19  E-value=0.0026  Score=45.66  Aligned_cols=117  Identities=20%  Similarity=0.214  Sum_probs=68.8

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhcC--CceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYA--KTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      |.+.|.|+ |.+|..+|..++.+|.  ++++.|+++++++....++.+...  ........   .+.         +.+.
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~---~d~---------~~l~   68 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI---NDW---------AALA   68 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE---SCG---------GGGT
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceec---cCH---------HHhc
Confidence            56678895 8999999999999884  799999999887766666664321  22222211   111         2233


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECC
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGS  193 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS  193 (255)
                        +-|++|..||....    ..+.+-++-...++.|    ..+++.+.+.+.+.. ++-++++|.
T Consensus        69 --~adiVVitaG~~~~----~~~~~g~~R~~l~~~N----~~i~~~i~~~i~~~~p~aivivvtN  123 (146)
T d1hyha1          69 --DADVVISTLGNIKL----QQDNPTGDRFAELKFT----SSMVQSVGTNLKESGFHGVLVVISN  123 (146)
T ss_dssp             --TCSEEEECCSCGGG----TC-------CTTHHHH----HHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             --cccEEEEecccccc----ccccCCccHHHHHHHH----HHHHHHHHHHHhhcCCCeEEEEecC
Confidence              45599999996432    1111111112233444    456677777676654 556666653

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.18  E-value=0.0044  Score=44.71  Aligned_cols=115  Identities=17%  Similarity=0.179  Sum_probs=66.8

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCC---------cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHH
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGL---------NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIK  125 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~---------~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  125 (255)
                      .|.|+||+|.+|..++..|+..+.         +++..+++.+.++....++.... ......+....  .       ..
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~-------~~   75 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA-FPLLAGLEATD--D-------PK   75 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT-CTTEEEEEEES--C-------HH
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccc-cccccccccCC--c-------hh
Confidence            699999999999999999998763         22333455555555555554432 22333333332  1       23


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-C-CcEEEEECC
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-K-KGAIVNIGS  193 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~-~g~iv~vsS  193 (255)
                      +.+.  +.|++|..||....     ...+.+++   ++.    ...+++...+.+.+. + .+.++.+|.
T Consensus        76 ~~~~--~advViitaG~~~~-----pg~~r~dl---~~~----N~~i~~~~~~~i~k~a~~~~~vivvsN  131 (154)
T d1y7ta1          76 VAFK--DADYALLVGAAPRK-----AGMERRDL---LQV----NGKIFTEQGRALAEVAKKDVKVLVVGN  131 (154)
T ss_dssp             HHTT--TCSEEEECCCCCCC-----TTCCHHHH---HHH----HHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             hhcc--cccEEEeecCcCCC-----CCCcHHHH---HHH----HHHHHHHHHHHHHHhCCCCcEEEEecC
Confidence            4455  45599999997532     23454433   333    345566666666653 3 355666653

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=97.17  E-value=0.00081  Score=49.65  Aligned_cols=80  Identities=20%  Similarity=0.231  Sum_probs=52.1

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|.+|+|.|+ +|+|...+..++..|+ +|+.+++++++++...+    .  +.+. .+  |..++ .+..+++.+....
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~----~--GAd~-~i--n~~~~-~~~~~~~~~~~~~   96 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV----F--GATD-FV--NPNDH-SEPISQVLSKMTN   96 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----T--TCCE-EE--CGGGC-SSCHHHHHHHHHT
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH----c--CCcE-EE--cCCCc-chhHHHHHHhhcc
Confidence            4899999986 7788888888888887 68889999888765432    2  2222 22  22221 1223444444444


Q ss_pred             CCccEEEEecCC
Q 025260          131 LDVGVLINNVGI  142 (255)
Q Consensus       131 ~~id~lv~nag~  142 (255)
                      ..+|+++.+.|.
T Consensus        97 ~G~d~vid~~G~  108 (175)
T d1cdoa2          97 GGVDFSLECVGN  108 (175)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCcceeeeecCC
Confidence            467799999985

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.14  E-value=0.0019  Score=47.87  Aligned_cols=117  Identities=17%  Similarity=0.189  Sum_probs=66.6

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcC---C----cEEEEeCCh--hhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHH
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTG---L----NLVLVGRNP--DKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVER  123 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G---~----~V~l~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  123 (255)
                      -..|.||||+|.||.+++..|++..   .    .+.+.+.++  +.++...-++...... ....+..  +++       
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~-~~~~~~~--~~~-------   93 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYP-LLREVSI--GID-------   93 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCT-TEEEEEE--ESC-------
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccc-cccCccc--ccc-------
Confidence            3569999999999999999999853   2    344555444  3344445455443222 2222222  222       


Q ss_pred             HHHHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-C-CcEEEEECC
Q 025260          124 IKEAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-K-KGAIVNIGS  193 (255)
Q Consensus       124 ~~~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~-~g~iv~vsS  193 (255)
                      ..+.+.  +.|++|..+|....     ..++.++   .++.|    ..+.+...+.+.+. + ...|+.+|.
T Consensus        94 ~~~~~~--~aDvVvi~ag~~rk-----pg~tR~D---ll~~N----~~I~k~~~~~i~~~a~~~~~vlvv~N  151 (175)
T d7mdha1          94 PYEVFE--DVDWALLIGAKPRG-----PGMERAA---LLDIN----GQIFADQGKALNAVASKNVKVLVVGN  151 (175)
T ss_dssp             HHHHTT--TCSEEEECCCCCCC-----TTCCHHH---HHHHH----HHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             chhhcc--CCceEEEeeccCCC-----CCCcHHH---HHHHH----HHHHHHHHHHHHhhCCCCcEEEEecC
Confidence            334555  45599999987532     2344443   34444    45556666666653 3 355656643

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.10  E-value=0.01  Score=43.08  Aligned_cols=116  Identities=20%  Similarity=0.229  Sum_probs=72.6

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhcC--CceEEEEEEECCCCcHHHHHHHHH
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYA--KTQIKSVVVDFSGDLDEGVERIKE  126 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~  126 (255)
                      .+.+.+.|.|+ |.+|.++|..++.+|.  ++++.|++++..+....++.....  ..... ...  . +        .+
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~-~~~--~-d--------~~   84 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKI-VAD--K-D--------YS   84 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEE-EEC--S-S--------GG
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeE-Eec--c-c--------hh
Confidence            45677888896 9999999999999995  799999999888766666654211  11111 111  1 1        12


Q ss_pred             HhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECC
Q 025260          127 AIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGS  193 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS  193 (255)
                      ...+  -|++|..||.....     ..+.   ...++.    ...+.+.+.|.+.+.. ++-++++|.
T Consensus        85 ~~~~--adiVVitAg~~~~~-----g~tR---~~l~~~----N~~i~~~i~~~i~~~~p~aiiivvtN  138 (160)
T d1i0za1          85 VTAN--SKIVVVTAGVRQQE-----GESR---LNLVQR----NVNVFKFIIPQIVKYSPDCIIIVVSN  138 (160)
T ss_dssp             GGTT--CSEEEECCSCCCCT-----TCCG---GGGHHH----HHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             hccc--ccEEEEecCCcccc-----Ccch---HHHHHH----HHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence            2343  44999999975321     2222   223333    4556677777776644 566666654

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.08  E-value=0.00046  Score=48.70  Aligned_cols=54  Identities=19%  Similarity=0.272  Sum_probs=41.3

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD  116 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  116 (255)
                      |.++|.|+ |-+|..+|++|.++|.+|++++.+++..++..    +.  .  ...+..|.++.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~----~~--~--~~~~~gd~~~~   54 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SY--A--THAVIANATEE   54 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT----TT--C--SEEEECCTTCT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH----Hh--C--Ccceeeecccc
Confidence            45667766 79999999999999999999999988877653    22  2  23455787775

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.07  E-value=0.00043  Score=51.01  Aligned_cols=41  Identities=22%  Similarity=0.271  Sum_probs=35.7

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~   93 (255)
                      .|++++|.|+ |++|...+..+...|++|+++++++++++.+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a   67 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA   67 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh
Confidence            4899999987 8999998887778999999999999887654

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.05  E-value=0.0013  Score=48.25  Aligned_cols=75  Identities=15%  Similarity=0.147  Sum_probs=50.1

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|++|+|.|+ |++|...+.-+...|++++++++++++.+.+ +++     +.+..   +|..++  +   ...+  ...
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a-~~l-----Gad~~---i~~~~~--~---~~~~--~~~   92 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAA-KAL-----GADEV---VNSRNA--D---EMAA--HLK   92 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHH-----TCSEE---EETTCH--H---HHHT--TTT
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHH-hcc-----CCcEE---EECchh--h---HHHH--hcC
Confidence            4899999986 8999998888888999999999998876533 333     22221   243332  1   1111  122


Q ss_pred             CccEEEEecCCC
Q 025260          132 DVGVLINNVGIS  143 (255)
Q Consensus       132 ~id~lv~nag~~  143 (255)
                      .+|+++.++|..
T Consensus        93 ~~D~vid~~g~~  104 (168)
T d1uufa2          93 SFDFILNTVAAP  104 (168)
T ss_dssp             CEEEEEECCSSC
T ss_pred             CCceeeeeeecc
Confidence            578999998853

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.05  E-value=0.00069  Score=48.92  Aligned_cols=44  Identities=16%  Similarity=0.223  Sum_probs=37.5

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHH
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD   92 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~   92 (255)
                      ++..=|.+.|.||.|-+|..+|+.|.+.|++|.+.+|+.....+
T Consensus         5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~   48 (152)
T d2pv7a2           5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAE   48 (152)
T ss_dssp             SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHH
T ss_pred             cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccc
Confidence            34445789999999999999999999999999999998765443

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.02  E-value=0.0011  Score=45.39  Aligned_cols=40  Identities=18%  Similarity=0.068  Sum_probs=35.1

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD   88 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~   88 (255)
                      .++++||.++|.||+. +|..-++.|.+.|++|++.+....
T Consensus         7 ~l~l~~k~vlVvG~G~-va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           7 FCQLRDRDCLIVGGGD-VAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             EECCBTCEEEEECCSH-HHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EEEeCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeccCC
Confidence            3567899999999875 999999999999999999987654

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.99  E-value=0.0025  Score=45.57  Aligned_cols=114  Identities=16%  Similarity=0.259  Sum_probs=66.4

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      .+.|+||+|.+|.++|..|+.+|.  ++++.|.++.+.+  ..++.......   ....-+..      ....+.+.+  
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~--a~Dl~~~~~~~---~~~~~~~~------~~~~~~~~~--   68 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV--AADLSHIETRA---TVKGYLGP------EQLPDCLKG--   68 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH--HHHHTTSSSSC---EEEEEESG------GGHHHHHTT--
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh--hHHHhhhhhhc---CCCeEEcC------CChHHHhCC--
Confidence            478999999999999999999985  6999998765433  23443221111   11111111      123344453  


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECC
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGS  193 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS  193 (255)
                      -|++|..||.....     .++.   .+.++.|..    +++.+.+.+.+.. ++.++++|.
T Consensus        69 aDivVitag~~~~~-----g~sR---~~ll~~N~~----i~~~i~~~i~~~~p~~iiivvtN  118 (144)
T d1mlda1          69 CDVVVIPAGVPRKP-----GMTR---DDLFNTNAT----IVATLTAACAQHCPDAMICIISN  118 (144)
T ss_dssp             CSEEEECCSCCCCT-----TCCG---GGGHHHHHH----HHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CCEEEECCCcCCCC-----CCCc---chHHHHHHH----HHHHHHHHHHhcCCCeEEEEecC
Confidence            44999999974321     2232   223444444    4455566565544 567777765

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.95  E-value=0.00075  Score=49.71  Aligned_cols=45  Identities=18%  Similarity=0.296  Sum_probs=38.7

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSI   97 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~   97 (255)
                      ++|.|+|.|+ ||.+++++..|.+.|+ +|.+..|+.++.++..+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            4778999987 8999999999999997 7999999998877766544

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.92  E-value=0.0032  Score=45.83  Aligned_cols=45  Identities=22%  Similarity=0.296  Sum_probs=38.2

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~   93 (255)
                      ++.+.||+++|.|=. -||+.+|+.+...|++|++++.++.+.-++
T Consensus        19 ~~~l~Gk~v~V~GyG-~iG~g~A~~~rg~G~~V~v~e~dp~~al~A   63 (163)
T d1li4a1          19 DVMIAGKVAVVAGYG-DVGKGCAQALRGFGARVIITEIDPINALQA   63 (163)
T ss_dssp             CCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CceecCCEEEEeccc-cccHHHHHHHHhCCCeeEeeecccchhHHh
Confidence            456789999999854 899999999999999999999998654433

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.89  E-value=0.0024  Score=47.10  Aligned_cols=42  Identities=24%  Similarity=0.321  Sum_probs=36.5

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHH
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSD   95 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~   95 (255)
                      .|++.|.|| |.+|.++|..|+++|++|.+.+|+++..+...+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            367888888 899999999999999999999999887766543

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.88  E-value=0.0029  Score=46.01  Aligned_cols=41  Identities=29%  Similarity=0.448  Sum_probs=35.2

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~   93 (255)
                      +|++|+|.|+ |++|...+..+...|++|+++++++++++..
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~   67 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA   67 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence            3788999875 8999998888888999999999999887654

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.86  E-value=0.0012  Score=49.75  Aligned_cols=44  Identities=30%  Similarity=0.343  Sum_probs=38.2

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHH
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQ   98 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~   98 (255)
                      |.|.|.|| |-+|..+|..++..|++|++.|++++.+++..+.+.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~   48 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE   48 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence            67888888 779999999999999999999999988777666554

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.75  E-value=0.021  Score=40.48  Aligned_cols=113  Identities=19%  Similarity=0.288  Sum_probs=66.8

Q ss_pred             EEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      +.|.|+ |.+|.++|..++.+|.  ++++.|+++++.+....+++...+......+..  +++       . +...  +-
T Consensus         4 i~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~--~~~-------~-~~~~--da   70 (143)
T d1llda1           4 LAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDG--SDD-------P-EICR--DA   70 (143)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEE--ESC-------G-GGGT--TC
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeec--CCC-------H-HHhh--CC
Confidence            556686 9999999999999985  799999999887766666664311111111111  111       1 1233  34


Q ss_pred             cEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECC
Q 025260          134 GVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGS  193 (255)
Q Consensus       134 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS  193 (255)
                      |++|..||....     ...+..   +.++.|    ..+.+...+.+.+.. ++.++++|.
T Consensus        71 DvVVitaG~~~~-----~g~~R~---dl~~~N----~~i~~~i~~~i~~~~p~ai~ivvtN  119 (143)
T d1llda1          71 DMVVITAGPRQK-----PGQSRL---ELVGAT----VNILKAIMPNLVKVAPNAIYMLITN  119 (143)
T ss_dssp             SEEEECCCCCCC-----TTCCHH---HHHHHH----HHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             cEEEEecccccC-----CCCchh---hhhhhh----HHHHHHHHHHHHhhCCCeEEEEeCC
Confidence            599999997532     133433   234444    345566666565544 465666553

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.75  E-value=0.00065  Score=44.88  Aligned_cols=38  Identities=13%  Similarity=0.070  Sum_probs=33.4

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD   88 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~   88 (255)
                      +++||+++|.|. |.-|.++|+.|.++|++|++.|.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            356999999998 66899999999999999999998654

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.74  E-value=0.024  Score=40.93  Aligned_cols=115  Identities=19%  Similarity=0.281  Sum_probs=70.7

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhcCCce-EEEEEEECCCCcHHHHHHHHHHhc
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKTQ-IKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      ...+.|.|+ |.+|..+|..|+.+|.  ++++.|++++..+....++........ ......+  +.         +...
T Consensus        19 ~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~--d~---------~~~~   86 (159)
T d2ldxa1          19 RCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGK--DY---------NVSA   86 (159)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEES--SG---------GGGT
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEecc--ch---------hhhc
Confidence            455777786 9999999999999884  799999999888777777765321111 1111111  11         1223


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECC
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGS  193 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS  193 (255)
                        +-|++|..||.....     ..+..   ..++    ....+.+.+.+.+.+.. ++.++++|.
T Consensus        87 --~adivvitag~~~~~-----~~~R~---dll~----~N~~i~~~i~~~i~~~~p~~ivivvtN  137 (159)
T d2ldxa1          87 --NSKLVIITAGARMVS-----GQTRL---DLLQ----RNVAIMKAIVPGVIQNSPDCKIIVVTN  137 (159)
T ss_dssp             --TEEEEEECCSCCCCT-----TTCSS---CTTH----HHHHHHHHHTTTHHHHSTTCEEEECSS
T ss_pred             --cccEEEEecccccCC-----CCCHH---HHHH----HHHHHHHHHHHHHhccCCCeEEEEeCC
Confidence              456999999975421     12211   1122    34556677788776544 566666654

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.73  E-value=0.00077  Score=50.37  Aligned_cols=88  Identities=17%  Similarity=0.158  Sum_probs=57.0

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHH-HHHHHHhhcCCceEEEEEEECCCCcHHHH-HHHHHHh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD-VSDSIQAKYAKTQIKSVVVDFSGDLDEGV-ERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~~~  128 (255)
                      ++||++.|.|.+. ||+.+++.+...|++|+..+|+..+... ..+++.+.....++..+.+..+++-...+ ++..+.+
T Consensus        40 l~gk~vgIiG~G~-IG~~va~~l~~~g~~v~~~d~~~~~~~~~~~~~l~ell~~sDiv~~~~pl~~~t~~li~~~~l~~m  118 (181)
T d1qp8a1          40 IQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTPKEGPWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALM  118 (181)
T ss_dssp             CTTCEEEEESCST-HHHHHHHHHHHTTCEEEEECSSCCCSSSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTS
T ss_pred             ccCceEEEecccc-ccccceeeeeccccccccccccccccceeeeechhhhhhccchhhcccccccccccccccceeeec
Confidence            7799999999865 9999999999999999999987643211 11122233336678888887776433333 3333333


Q ss_pred             cCCCccEEEEecCC
Q 025260          129 EGLDVGVLINNVGI  142 (255)
Q Consensus       129 ~~~~id~lv~nag~  142 (255)
                      ++   +.++-|+|.
T Consensus       119 k~---~ailIN~~R  129 (181)
T d1qp8a1         119 AE---DAVFVNVGR  129 (181)
T ss_dssp             CT---TCEEEECSC
T ss_pred             cc---cceEEeccc
Confidence            33   345555654

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.72  E-value=0.0013  Score=48.12  Aligned_cols=39  Identities=28%  Similarity=0.294  Sum_probs=33.0

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHH
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSD   95 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~   95 (255)
                      +.|.|. |-+|.++|+.|.+.|++|+..+|+++..+++.+
T Consensus         3 I~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~   41 (165)
T d2f1ka2           3 IGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVE   41 (165)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             EEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHH
Confidence            556655 999999999999999999999999887776544

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.68  E-value=0.007  Score=45.01  Aligned_cols=90  Identities=19%  Similarity=0.189  Sum_probs=59.0

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHH-----HHHhhcCCceEEEEEEECCCCcHHHH-HH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSD-----SIQAKYAKTQIKSVVVDFSGDLDEGV-ER  123 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~d~~~~~~~~~-~~  123 (255)
                      .+.||++.|.| .|.||+++|+.+...|++|+..++..........     ++.+....+++..+.+.++++-+..+ ++
T Consensus        41 ~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~~~l~ell~~sDiv~~~~Plt~~T~~lin~~  119 (184)
T d1ygya1          41 EIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLIDKE  119 (184)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHH
T ss_pred             cccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhhcCceeccHHHHHhhCCEEEEcCCCCchhhhhhhHH
Confidence            46799999988 5899999999999999999999987654332211     12222224678888888887543433 22


Q ss_pred             HHHHhcCCCccEEEEecCCC
Q 025260          124 IKEAIEGLDVGVLINNVGIS  143 (255)
Q Consensus       124 ~~~~~~~~~id~lv~nag~~  143 (255)
                      .   +...+.+.++-|.|..
T Consensus       120 ~---l~~mk~~a~lIN~sRG  136 (184)
T d1ygya1         120 A---LAKTKPGVIIVNAARG  136 (184)
T ss_dssp             H---HTTSCTTEEEEECSCT
T ss_pred             H---HhhhCCCceEEEecch
Confidence            2   3333334677777764

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.62  E-value=0.0054  Score=43.98  Aligned_cols=76  Identities=11%  Similarity=0.090  Sum_probs=54.6

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCc
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~i  133 (255)
                      .+++|.|. +.+|..++++|.++|.+|++++.+++...+..++...    ..+.++..|.++.      .+.+..+-.+.
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~----~~~~vi~Gd~~d~------~~L~~a~i~~a   72 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG----DNADVIPGDSNDS------SVLKKAGIDRC   72 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC----TTCEEEESCTTSH------HHHHHHTTTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc----CCcEEEEccCcch------HHHHHhccccC
Confidence            35777777 6999999999999999999999998876666655543    3467788888874      34444333345


Q ss_pred             cEEEEec
Q 025260          134 GVLINNV  140 (255)
Q Consensus       134 d~lv~na  140 (255)
                      +.+|...
T Consensus        73 ~~vi~~~   79 (153)
T d1id1a_          73 RAILALS   79 (153)
T ss_dssp             SEEEECS
T ss_pred             CEEEEcc
Confidence            5776543

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.60  E-value=0.0053  Score=43.67  Aligned_cols=114  Identities=16%  Similarity=0.208  Sum_probs=65.0

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcC--CceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYA--KTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      |.+.|.|+ |.+|.++|..|+.++. ++++.|.+++..+....++.....  .........+   +        .+... 
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~---d--------~~~~~-   68 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTN---N--------YADTA-   68 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES---C--------GGGGT-
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecC---c--------HHHhc-
Confidence            35666686 9999999999999885 899999998877666655543210  1111111111   1        11223 


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECC
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGS  193 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS  193 (255)
                       +-|++|.+||.....     ..+.   .+.++.|    ..+++...+.+.+.. ++.++++|.
T Consensus        69 -~advvvitag~~~~~-----~~~r---~dl~~~N----~~i~~~i~~~i~k~~p~aivivvtN  119 (142)
T d1uxja1          69 -NSDVIVVTSGAPRKP-----GMSR---EDLIKVN----ADITRACISQAAPLSPNAVIIMVNN  119 (142)
T ss_dssp             -TCSEEEECCSCC-----------------CHHHH----HHHHHHHHHHHGGGCTTCEEEECSS
T ss_pred             -CCCEEEEeeeccCCc-----Ccch---hHHHhHH----HHHHHHHHHHHhccCCCceEEEeCC
Confidence             345999999975321     1122   2334444    356677777776644 566666543

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.55  E-value=0.0011  Score=50.32  Aligned_cols=43  Identities=23%  Similarity=0.361  Sum_probs=37.8

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~   93 (255)
                      +++||+|.|-| -|.+|..+|+.|.+.|++|++.+.+...+...
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~   66 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA   66 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence            47799999997 67799999999999999999999998776544

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.48  E-value=0.04  Score=38.76  Aligned_cols=112  Identities=16%  Similarity=0.237  Sum_probs=67.6

Q ss_pred             EEEEECCCCchHHHHHHHHHHcC--CcEEEEeCChhhHHHHHHHHHhhcC-CceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYA-KTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G--~~V~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .+.|.|+ |.+|..+|..++.+|  .++++.|+++++++....++....+ ........    ++        .+++.  
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~----~~--------~~~~~--   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA----GD--------YADLK--   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE----CC--------GGGGT--
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccC----Cc--------HHHhc--
Confidence            3567786 899999999999888  4799999999887766666654321 11222211    11        01233  


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECC
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGS  193 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS  193 (255)
                      +-|++|..||....     ...+..+   .+..|    ..+.+...+.+.+. +++.++++|.
T Consensus        67 ~adivvitag~~~~-----~g~~r~d---l~~~N----~~I~~~i~~~i~~~~p~aivivvtN  117 (140)
T d1a5za1          67 GSDVVIVAAGVPQK-----PGETRLQ---LLGRN----ARVMKEIARNVSKYAPDSIVIVVTN  117 (140)
T ss_dssp             TCSEEEECCCCCCC-----SSCCHHH---HHHHH----HHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             CCCEEEEecccccC-----CCcchhh---hhccc----cchHHHHHHHHHhcCCCcEEEEeCC
Confidence            44599999997533     1233322   23333    34566667766654 4566666553

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.47  E-value=0.033  Score=39.46  Aligned_cols=114  Identities=22%  Similarity=0.288  Sum_probs=65.2

Q ss_pred             EEEEECCCCchHHHHHHHHHHc-C--CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           55 WALVTGPTDGIGKSFAFQLAKT-G--LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~-G--~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .+.|+|++|.+|.++|..|+.+ +  .++.+.|..+ ..+....++...........  ..-+++        .+.+.  
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~--~~~~~~--------~~~~~--   68 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKG--FSGEDA--------TPALE--   68 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEE--ECSSCC--------HHHHT--
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcE--EEcCCC--------ccccC--
Confidence            4789999999999999998743 4  5899999865 44444445554322222211  211222        12333  


Q ss_pred             CccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECC
Q 025260          132 DVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGS  193 (255)
Q Consensus       132 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS  193 (255)
                      +-|++|..||.....     ..+.   .+.++.|    ..+.+...+.+.+. .++.++++|.
T Consensus        69 ~aDvvvitaG~~~k~-----g~~R---~dl~~~N----~~i~~~v~~~i~~~~p~aivivvtN  119 (145)
T d2cmda1          69 GADVVLISAGVRRKP-----GMDR---SDLFNVN----AGIVKNLVQQVAKTCPKACIGIITN  119 (145)
T ss_dssp             TCSEEEECCSCCCCT-----TCCG---GGGHHHH----HHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CCCEEEECCCccCCC-----Ccch---hhHHHHH----HHHHHHHHHHHHhhCCCcEEEEccC
Confidence            345999999975321     2232   2344555    34445555555544 3566666665

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.45  E-value=0.059  Score=37.97  Aligned_cols=113  Identities=12%  Similarity=0.168  Sum_probs=66.7

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCC--cEEEEeCCh--hhHHHHHHHHHhhcC-CceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNP--DKLKDVSDSIQAKYA-KTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~--~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      .+.|+||+|.+|.++|..+..+|.  ++++.|.+.  +..+....++....+ .........|   .         +.+.
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~---~---------~~~~   69 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG---Y---------EDTA   69 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC---G---------GGGT
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCC---H---------HHhh
Confidence            478999999999999999999985  699999643  344444445543211 2222222111   1         1233


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECC
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGS  193 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS  193 (255)
                        +-|++|..||....     ..++..   +.++.|    ..+.+...+.+.+.. ++.++.+|.
T Consensus        70 --~aDiVvitaG~~~~-----~g~~R~---dl~~~N----~~I~~~i~~~i~~~~p~~i~ivvtN  120 (142)
T d1o6za1          70 --GSDVVVITAGIPRQ-----PGQTRI---DLAGDN----APIMEDIQSSLDEHNDDYISLTTSN  120 (142)
T ss_dssp             --TCSEEEECCCCCCC-----TTCCHH---HHHHHH----HHHHHHHHHHHHTTCSCCEEEECCS
T ss_pred             --hcCEEEEecccccc-----cCCchh---hHHHHH----HHHHHHHHHHHHhcCCCceEEEecC
Confidence              45599999996432     123332   233333    456677777776654 555666643

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.44  E-value=0.002  Score=48.24  Aligned_cols=44  Identities=20%  Similarity=0.245  Sum_probs=37.4

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHH
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQ   98 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~   98 (255)
                      |.|.|.|| |-+|..+|..++..|++|++.|++++.+++..+.+.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~   48 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAA   48 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhh
Confidence            45778888 779999999999999999999999988877666544

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.43  E-value=0.0054  Score=45.19  Aligned_cols=39  Identities=15%  Similarity=0.320  Sum_probs=33.6

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHH
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSD   95 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~   95 (255)
                      +-|.|- |-+|.++|+.|++.|++|++.+|++++.++..+
T Consensus         5 Ig~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~   43 (176)
T d2pgda2           5 IALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLA   43 (176)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHH
T ss_pred             EEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH
Confidence            455665 889999999999999999999999998877654

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.43  E-value=0.011  Score=42.34  Aligned_cols=119  Identities=15%  Similarity=0.164  Sum_probs=68.9

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhc--CCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKY--AKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      ..+.|.|+ |++|.++|..+..++. ++++.|++++..+....++....  ..........+..           +.+. 
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~-----------~~~~-   70 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-----------DDLA-   70 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-----------GGGT-
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecccc-----------cccC-
Confidence            34667785 9999999998888885 89999999988776666665421  1122222222211           2333 


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECC
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGS  193 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS  193 (255)
                       +-|++|..+|........-.+.+.   ...++.|    ..+.+.+.+.+.+.. ++.++++|.
T Consensus        71 -~advvvitag~~~~~g~~~~~~~R---~~l~~~N----~~iv~~i~~~i~~~~p~aivivvtN  126 (150)
T d1t2da1          71 -GADVVIVTAGFTKAPGKSDKEWNR---DDLLPLN----NKIMIEIGGHIKKNCPNAFIIVVTN  126 (150)
T ss_dssp             -TCSEEEECCSCSSCTTCCSTTCCG---GGGHHHH----HHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             -CCcEEEEecccccCCCCCccccch---hHHHHHH----HHHHHHHHHHHHhcCCCeEEEEecC
Confidence             455999999975432111111111   2234444    455666666665544 566666654

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=96.38  E-value=0.0045  Score=48.21  Aligned_cols=63  Identities=24%  Similarity=0.317  Sum_probs=49.5

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCC-------------------hhhHHHHHHHHHhhcCCceEEEE
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRN-------------------PDKLKDVSDSIQAKYAKTQIKSV  109 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~  109 (255)
                      ++++++|+|.| .||+|..+++.|++.|. ++.++|.+                   ..+.+.+.+.+++.++...+..+
T Consensus        27 kL~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~  105 (247)
T d1jw9b_          27 ALKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  105 (247)
T ss_dssp             HHHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhh
Confidence            46689999999 67899999999999997 78888754                   12566777888888887777765


Q ss_pred             EEEC
Q 025260          110 VVDF  113 (255)
Q Consensus       110 ~~d~  113 (255)
                      ...+
T Consensus       106 ~~~~  109 (247)
T d1jw9b_         106 NALL  109 (247)
T ss_dssp             CSCC
T ss_pred             hhhh
Confidence            4433

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.34  E-value=0.035  Score=39.17  Aligned_cols=113  Identities=12%  Similarity=0.141  Sum_probs=67.3

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhcC--CceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYA--KTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .+.|.|+ |.+|.++|..++.+|.  ++++.|++++..+....+++...+  .........   ++        .+.+. 
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~---~d--------~~~~~-   68 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG---AD--------YSLLK-   68 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE---SC--------GGGGT-
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC---CC--------HHHhc-
Confidence            3567786 9999999999998884  699999999887766666654311  111122211   11        12344 


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCC-CcEEEEECC
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIVNIGS  193 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~-~g~iv~vsS  193 (255)
                       +-|++|..||....     ...+..   +.+..    ...+.+...+.+.+.. ++.++++|.
T Consensus        69 -~adiVvitag~~~~-----~g~~r~---~l~~~----n~~i~~~i~~~i~~~~p~aivivvtN  119 (142)
T d1ojua1          69 -GSEIIVVTAGLARK-----PGMTRL---DLAHK----NAGIIKDIAKKIVENAPESKILVVTN  119 (142)
T ss_dssp             -TCSEEEECCCCCCC-----SSCCHH---HHHHH----HHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             -cccEEEEeccccCC-----CCCchH---HHHHH----hhHHHHHHHHHHHhhCCCcEEEEecC
Confidence             34489999986432     122332   22333    3455566666666644 566666654

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.33  E-value=0.0051  Score=49.21  Aligned_cols=25  Identities=16%  Similarity=0.231  Sum_probs=22.1

Q ss_pred             CCchHHHHHHHHHHcCCcEEEEeCC
Q 025260           62 TDGIGKSFAFQLAKTGLNLVLVGRN   86 (255)
Q Consensus        62 s~gIG~~la~~la~~G~~V~l~~r~   86 (255)
                      ||..|.++|+++.++|++|+++.+.
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecC
Confidence            5679999999999999999998644

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.27  E-value=0.0049  Score=46.42  Aligned_cols=90  Identities=18%  Similarity=0.156  Sum_probs=55.8

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHH----HHHHhhcCCceEEEEEEECCCCcHHHH-HHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS----DSIQAKYAKTQIKSVVVDFSGDLDEGV-ERI  124 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~----~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~  124 (255)
                      .++||++.|.|- |.||+.+|+.+...|++|+..++......+..    .++.+.....++..+.+..+++-+..+ ++.
T Consensus        40 el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~~~~~~~~l~~~l~~sDii~~~~plt~~T~~li~~~~  118 (197)
T d1j4aa1          40 EVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPELEKKGYYVDSLDDLYKQADVISLHVPDVPANVHMINDES  118 (197)
T ss_dssp             CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHHHHTTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHH
T ss_pred             cccCCeEEEecc-cccchhHHHhHhhhcccccccCcccccccccceeeeccccccccccccccccCCccccccccccHHH
Confidence            477999999986 68999999999999999999997654322210    112222223567777777765432322 333


Q ss_pred             HHHhcCCCccEEEEecCCC
Q 025260          125 KEAIEGLDVGVLINNVGIS  143 (255)
Q Consensus       125 ~~~~~~~~id~lv~nag~~  143 (255)
                      .+.+++ +  .++-|.|..
T Consensus       119 l~~mk~-~--a~lIN~sRG  134 (197)
T d1j4aa1         119 IAKMKQ-D--VVIVNVSRG  134 (197)
T ss_dssp             HHHSCT-T--EEEEECSCG
T ss_pred             HhhhCC-c--cEEEecCch
Confidence            344443 2  555566553

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.21  E-value=0.012  Score=41.76  Aligned_cols=111  Identities=22%  Similarity=0.294  Sum_probs=61.9

Q ss_pred             EEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHHHHHhhcCCc-eEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSDSIQAKYAKT-QIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      +.|.|+ |.+|.++|..++.+|.  ++++.|++++..+....++....+.. .....    +.+        .+++.  +
T Consensus         4 I~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~----~~~--------~~~~~--~   68 (142)
T d1y6ja1           4 VAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY----AGD--------YSDVK--D   68 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC------C--------GGGGT--T
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEe----eCc--------HHHhC--C
Confidence            455587 9999999999999885  79999999987665555665422111 11111    111        12334  3


Q ss_pred             ccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECC
Q 025260          133 VGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGS  193 (255)
Q Consensus       133 id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS  193 (255)
                      -|++|..||.....     ..+.   ...++.|    ..+.+.+.+.+.+. .++.++++|.
T Consensus        69 adivvitag~~~~~-----~~~r---~~l~~~N----~~i~~~i~~~i~~~~p~ai~ivvtN  118 (142)
T d1y6ja1          69 CDVIVVTAGANRKP-----GETR---LDLAKKN----VMIAKEVTQNIMKYYNHGVILVVSN  118 (142)
T ss_dssp             CSEEEECCCC-----------CH---HHHHHHH----HHHHHHHHHHHHHHCCSCEEEECSS
T ss_pred             CceEEEecccccCc-----Ccch---hHHhhHH----HHHHHHHHHHhhccCCCceEEEecC
Confidence            45999999965321     2232   2233444    45666666766654 4566666654

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.19  E-value=0.021  Score=40.37  Aligned_cols=113  Identities=18%  Similarity=0.217  Sum_probs=64.8

Q ss_pred             EEEEECCCCchHHHHHHHHHHcC--CcEEEEeCChhhHHHHHHHHHhhcC--CceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKYA--KTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G--~~V~l~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .+.|+|| |.+|.+++..++..|  .++++.|++++.++....++.....  .........   ++        .+++. 
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~---~~--------~~~~~-   68 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS---ND--------YADTA-   68 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE---SC--------GGGGT-
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec---CC--------HHHhc-
Confidence            3667796 999999999999998  4899999999877655545433210  111222111   11        11233 


Q ss_pred             CCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-CCcEEEEECC
Q 025260          131 LDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIVNIGS  193 (255)
Q Consensus       131 ~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~~g~iv~vsS  193 (255)
                       +-|++|..||.....     ..+..   ..++.|    ..+.+...+.+.+. +++.++++|.
T Consensus        69 -dadvvvitag~~~~~-----g~~r~---~l~~~N----~~i~~~i~~~i~~~~p~aivivvtN  119 (142)
T d1guza1          69 -NSDIVIITAGLPRKP-----GMTRE---DLLMKN----AGIVKEVTDNIMKHSKNPIIIVVSN  119 (142)
T ss_dssp             -TCSEEEECCSCCCCT-----TCCHH---HHHHHH----HHHHHHHHHHHHHHCSSCEEEECCS
T ss_pred             -CCeEEEEEEecCCCC-----CCchH---HHHHHH----HHHHHHHHHHhhccCCCeEEEEecC
Confidence             455999999975321     22222   223333    33455555555543 4566666643

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.18  E-value=0.0028  Score=53.68  Aligned_cols=64  Identities=14%  Similarity=0.230  Sum_probs=49.7

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh-------------------hhHHHHHHHHHhhcCCceEEEEE
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQIKSVV  110 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~~  110 (255)
                      +++..|+|.|+ ||+|.++++.|+..|. ++.++|.+.                   .+.+.+.+.+++.++..++..+.
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  113 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF  113 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeee
Confidence            44678999998 6799999999999998 899987541                   25666777888888887777766


Q ss_pred             EECCC
Q 025260          111 VDFSG  115 (255)
Q Consensus       111 ~d~~~  115 (255)
                      .++.+
T Consensus       114 ~~i~~  118 (426)
T d1yovb1         114 NKIQD  118 (426)
T ss_dssp             SCGGG
T ss_pred             ccccc
Confidence            55543

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=96.14  E-value=0.012  Score=42.55  Aligned_cols=45  Identities=16%  Similarity=0.235  Sum_probs=38.2

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~   93 (255)
                      ++-+.||+++|.| -|-+|+.+|+++...|++|+++..++-..-++
T Consensus        18 ~~~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA   62 (163)
T d1v8ba1          18 DFLISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQA   62 (163)
T ss_dssp             CCCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHH
T ss_pred             CceecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHH
Confidence            5567899999987 56799999999999999999999998654443

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=96.13  E-value=0.0025  Score=47.69  Aligned_cols=90  Identities=11%  Similarity=0.088  Sum_probs=58.2

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHH-------HHHhhcCCceEEEEEEECCCCcHHHH-
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSD-------SIQAKYAKTQIKSVVVDFSGDLDEGV-  121 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~-------~~~~~~~~~~~~~~~~d~~~~~~~~~-  121 (255)
                      .++|+++.|.| .|.||+++++.+...|++|...++.........+       ++.+.....++..+.+.++++-+..+ 
T Consensus        41 ~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~~l~~sD~v~~~~plt~~T~~li~  119 (188)
T d2naca1          41 DLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMIN  119 (188)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTCBS
T ss_pred             eccccceeecc-ccccchhhhhhhhccCceEEEEeeccccccccccccccccCCHHHHHHhccchhhcccccccchhhhH
Confidence            46799999998 4689999999999999999999986433222111       12233335678888888876543333 


Q ss_pred             HHHHHHhcCCCccEEEEecCCC
Q 025260          122 ERIKEAIEGLDVGVLINNVGIS  143 (255)
Q Consensus       122 ~~~~~~~~~~~id~lv~nag~~  143 (255)
                      ++..+.+   +.+.++-|.|..
T Consensus       120 ~~~l~~m---k~ga~lIN~aRG  138 (188)
T d2naca1         120 DETLKLF---KRGAYIVNTARG  138 (188)
T ss_dssp             HHHHTTS---CTTEEEEECSCG
T ss_pred             HHHHHhC---CCCCEEEecCch
Confidence            3333333   333666666654

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.03  E-value=0.0026  Score=45.65  Aligned_cols=38  Identities=24%  Similarity=0.334  Sum_probs=33.4

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCC
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN   86 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~   86 (255)
                      ..+++||++||.|| |.+|..-++.|.+.|++|.+++..
T Consensus         8 ~~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           8 AHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             EECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             heeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            34578999999999 569999999999999999999754

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.97  E-value=0.02  Score=41.04  Aligned_cols=114  Identities=23%  Similarity=0.276  Sum_probs=61.7

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCC-------cEEEEeCChh--hHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHH
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGL-------NLVLVGRNPD--KLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIK  125 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~-------~V~l~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  125 (255)
                      .|.|+||+|.+|.+++..|++.+-       .+++.+.++.  +++....++.... ......+..  .++       ..
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~-~~~~~~~~~--~~~-------~~   74 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCA-LPLLKDVIA--TDK-------EE   74 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTC-CTTEEEEEE--ESC-------HH
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccc-ccccccccc--Ccc-------cc
Confidence            589999999999999999987552       3566665443  3333333333322 222222222  222       23


Q ss_pred             HHhcCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhC-C-CcEEEEEC
Q 025260          126 EAIEGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKR-K-KGAIVNIG  192 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~-~-~g~iv~vs  192 (255)
                      +.+.  +.|++|..+|.....     ..+.+   +.++.|    ..+++...+.+.+. + .+.++.+|
T Consensus        75 ~~~~--~~dvVVitag~~~~~-----g~sr~---dll~~N----~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          75 IAFK--DLDVAILVGSMPRRD-----GMERK---DLLKAN----VKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             HHTT--TCSEEEECCSCCCCT-----TCCTT---TTHHHH----HHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             cccC--CceEEEEecccCCCC-----CCchh---HHHHHh----HHHHHHHHHHHHhhCCCceEEEEec
Confidence            4445  455999999975431     22222   223333    45556666666553 3 34455554

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.91  E-value=0.0033  Score=47.25  Aligned_cols=90  Identities=11%  Similarity=0.156  Sum_probs=57.0

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHH------HHHHhhcCCceEEEEEEECCCCcHHHH-H
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS------DSIQAKYAKTQIKSVVVDFSGDLDEGV-E  122 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~------~~~~~~~~~~~~~~~~~d~~~~~~~~~-~  122 (255)
                      .++||++.|.|. |.||+++|+.+...|++|+..++.........      .++.+.....++..+.+..+++-+..+ +
T Consensus        46 eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~l~~ll~~sD~i~~~~plt~~T~~li~~  124 (193)
T d1mx3a1          46 RIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLIND  124 (193)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBSH
T ss_pred             eeeCceEEEecc-ccccccceeeeeccccceeeccCcccccchhhhccccccchhhccccCCEEEEeecccccchhhhhH
Confidence            477999999965 68999999999999999999998643321110      112222224567888888876533333 2


Q ss_pred             HHHHHhcCCCccEEEEecCCC
Q 025260          123 RIKEAIEGLDVGVLINNVGIS  143 (255)
Q Consensus       123 ~~~~~~~~~~id~lv~nag~~  143 (255)
                      +..+.+   +.+.++-|.|..
T Consensus       125 ~~l~~m---k~~a~lIN~sRG  142 (193)
T d1mx3a1         125 FTVKQM---RQGAFLVNTARG  142 (193)
T ss_dssp             HHHTTS---CTTEEEEECSCT
T ss_pred             HHHhcc---CCCCeEEecCCc
Confidence            333333   333666666654

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.81  E-value=0.0089  Score=43.52  Aligned_cols=95  Identities=19%  Similarity=0.309  Sum_probs=59.9

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      .++++||.++|.|-|.=+|+.++.-|.++|++|.++......+++..+       ..++.+..+-..+-+       .. 
T Consensus        32 ~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~~~-------~ADivI~a~G~p~~i-------~~-   96 (166)
T d1b0aa1          32 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVE-------NADLLIVAVGKPGFI-------PG-   96 (166)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHHH-------HCSEEEECSCCTTCB-------CT-
T ss_pred             CcccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHHHh-------hhhHhhhhccCcccc-------cc-
Confidence            456789999999999999999999999999999988776655543332       234444444433321       11 


Q ss_pred             hcCCCccEEEEecCCCC-CcccccccCCHHHH
Q 025260          128 IEGLDVGVLINNVGISY-PYARFFHEVDQVLL  158 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~-~~~~~~~~~~~~~~  158 (255)
                       ..+..+.+|-.+|+.. ...+...+.+.++.
T Consensus        97 -~~vk~g~vvIDvGi~~~~~~~~~Gdvd~~~v  127 (166)
T d1b0aa1          97 -DWIKEGAIVIDVGINRLENGKVVGDVVFEDA  127 (166)
T ss_dssp             -TTSCTTCEEEECCCEECTTSCEECSBCHHHH
T ss_pred             -cccCCCcEEEecCceecCCCCEEeccccHhH
Confidence             1222336777788753 22223345554443

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.77  E-value=0.0069  Score=44.37  Aligned_cols=81  Identities=19%  Similarity=0.256  Sum_probs=56.1

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHH
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      .++++||.++|.|.|.=+|+.++.-|+++|++|.++......+.+..+       ..++.+...-..+-       +...
T Consensus        34 ~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~~~~-------~aDivi~a~G~~~~-------i~~~   99 (170)
T d1a4ia1          34 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEVN-------KGDILVVATGQPEM-------VKGE   99 (170)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHHT-------TCSEEEECCCCTTC-------BCGG
T ss_pred             CcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHHHHh-------hccchhhccccccc-------cccc
Confidence            456889999999999999999999999999999998877665543221       34555544443332       2222


Q ss_pred             hcCCCccEEEEecCCCC
Q 025260          128 IEGLDVGVLINNVGISY  144 (255)
Q Consensus       128 ~~~~~id~lv~nag~~~  144 (255)
                      +  +..+.+|-.+|+..
T Consensus       100 ~--vk~g~iviDvgi~~  114 (170)
T d1a4ia1         100 W--IKPGAIVIDCGINY  114 (170)
T ss_dssp             G--SCTTCEEEECCCBC
T ss_pred             c--ccCCCeEeccCccc
Confidence            2  22336777788753

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.76  E-value=0.034  Score=41.16  Aligned_cols=88  Identities=10%  Similarity=0.077  Sum_probs=56.8

Q ss_pred             cccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHH------HHHHHHHhhcCCceEEEEEEECCCCcHHHH-
Q 025260           49 LRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK------DVSDSIQAKYAKTQIKSVVVDFSGDLDEGV-  121 (255)
Q Consensus        49 ~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~------~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-  121 (255)
                      ..+.|+++.|.| -|.||+++|+.+...|++|+..++......      +..+++-+   ..++..+.+..+++-...+ 
T Consensus        40 ~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~ell~---~sDii~i~~plt~~T~~li~  115 (188)
T d1sc6a1          40 FEARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLN---MSDVVSLHVPENPSTKNMMG  115 (188)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHH---HCSEEEECCCSSTTTTTCBC
T ss_pred             ccccceEEEEee-cccchhhhhhhcccccceEeeccccccchhhhhhhhhhHHHHHh---hccceeecccCCcchhhhcc
Confidence            346799999985 679999999999999999999997643110      01122222   3567888888876433333 


Q ss_pred             HHHHHHhcCCCccEEEEecCCC
Q 025260          122 ERIKEAIEGLDVGVLINNVGIS  143 (255)
Q Consensus       122 ~~~~~~~~~~~id~lv~nag~~  143 (255)
                      ++..+.+++ +  .++-|.+..
T Consensus       116 ~~~l~~mk~-~--a~lIN~aRG  134 (188)
T d1sc6a1         116 AKEISLMKP-G--SLLINASRG  134 (188)
T ss_dssp             HHHHHHSCT-T--EEEEECSCS
T ss_pred             HHHHhhCCC-C--CEEEEcCcH
Confidence            445555554 3  455555553

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.69  E-value=0.013  Score=42.90  Aligned_cols=40  Identities=28%  Similarity=0.400  Sum_probs=35.6

Q ss_pred             cccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCC
Q 025260           47 KNLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN   86 (255)
Q Consensus        47 ~~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~   86 (255)
                      ...+++||.++|.|-|.=+|+-+|.-|+++|++|..+..+
T Consensus        23 ~g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          23 EGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             TTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             ccCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            3447889999999999999999999999999999987754

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.53  E-value=0.0062  Score=44.18  Aligned_cols=38  Identities=16%  Similarity=0.156  Sum_probs=32.0

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHH
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS   94 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~   94 (255)
                      |-+. |.|-+|.++|+.|+++|++|.+.+|+.++.++..
T Consensus         4 Ig~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~   41 (162)
T d3cuma2           4 IAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV   41 (162)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred             EEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhh
Confidence            4444 5689999999999999999999999988876654

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.34  E-value=0.026  Score=42.06  Aligned_cols=91  Identities=14%  Similarity=0.130  Sum_probs=57.0

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHH-------HHHhhcCCceEEEEEEECCCCcHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSD-------SIQAKYAKTQIKSVVVDFSGDLDEGVE  122 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~-------~~~~~~~~~~~~~~~~d~~~~~~~~~~  122 (255)
                      .++||++.|.|. |.||+++|+.+...|++|+..++..........       .+.+.....++..+.+..+++-+..++
T Consensus        44 ~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~ll~~sD~v~l~~plt~~T~~li~  122 (191)
T d1gdha1          44 KLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFN  122 (191)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBS
T ss_pred             eecccceEEeec-ccchHHHHHHHHhhccccccccccccccchhhcccccccCCHHHHHhhCCeEEecCCCCchHhheec
Confidence            466999999976 689999999999999999999976442221111       122222245778888888765433332


Q ss_pred             HHHHHhcCCCccEEEEecCCC
Q 025260          123 RIKEAIEGLDVGVLINNVGIS  143 (255)
Q Consensus       123 ~~~~~~~~~~id~lv~nag~~  143 (255)
                        ++.+...+.+.++-|.|..
T Consensus       123 --~~~l~~mk~~a~lIN~sRG  141 (191)
T d1gdha1         123 --KATIKSLPQGAIVVNTARG  141 (191)
T ss_dssp             --HHHHTTSCTTEEEEECSCG
T ss_pred             --HHHhhCcCCccEEEecCCc
Confidence              1223333334666666654

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.21  E-value=0.041  Score=40.12  Aligned_cols=36  Identities=17%  Similarity=0.359  Sum_probs=32.4

Q ss_pred             CCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHH
Q 025260           61 PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDS   96 (255)
Q Consensus        61 as~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~   96 (255)
                      |.|-+|.++|+.|++.|++|.+.+|++++.++..++
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            678899999999999999999999999988877655

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.17  E-value=0.48  Score=37.79  Aligned_cols=118  Identities=15%  Similarity=0.182  Sum_probs=69.9

Q ss_pred             CCcEEEEECCC-CchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           52 YGSWALVTGPT-DGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        52 ~gk~vlITGas-~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      +|++||=.|+. |+++.    .+++.|+ +|+.++.++..++.+.+.....+-..++.++..|..    +..+.+..  .
T Consensus       145 ~g~~VLDl~~g~G~~si----~~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~----~~~~~~~~--~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAI----HAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF----EEMEKLQK--K  214 (324)
T ss_dssp             TTCEEEETTCTTTHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH----HHHHHHHH--T
T ss_pred             CCCeeecccCcccchhh----hhhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh----hhhHHHHh--c
Confidence            37888888776 44444    3456776 799999999999988888776654455666655543    23333333  2


Q ss_pred             CCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECC
Q 025260          130 GLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGS  193 (255)
Q Consensus       130 ~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS  193 (255)
                      +..+|++|.++-.....        .......    ......+.+.+++.+  +++|.+++.|.
T Consensus       215 ~~~fD~Vi~DpP~~~~~--------~~~~~~~----~~~y~~l~~~a~~ll--~pGG~lv~~s~  264 (324)
T d2as0a2         215 GEKFDIVVLDPPAFVQH--------EKDLKAG----LRAYFNVNFAGLNLV--KDGGILVTCSC  264 (324)
T ss_dssp             TCCEEEEEECCCCSCSS--------GGGHHHH----HHHHHHHHHHHHTTE--EEEEEEEEEEC
T ss_pred             cCCCCchhcCCccccCC--------HHHHHHH----HHHHHHHHHHHHHHc--CCCcEEEEEeC
Confidence            33678999887543221        1111111    123344666666655  34576666653

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.10  E-value=0.047  Score=43.60  Aligned_cols=75  Identities=19%  Similarity=0.141  Sum_probs=53.5

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      .+||+||-.|++.|+   ++..++++|+ +|+.++.++.. ..+.+...+.+...++..+..|..+-          ..+
T Consensus        34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~~~~~~i~~~~~~~~~l----------~~~   99 (311)
T d2fyta1          34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLNKLEDTITLIKGKIEEV----------HLP   99 (311)
T ss_dssp             TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHTTCTTTEEEEESCTTTS----------CCS
T ss_pred             CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHhCCCccceEEEeeHHHh----------cCc
Confidence            469999999999886   6777888997 79999988754 44555555555566788888877652          112


Q ss_pred             CCCccEEEEe
Q 025260          130 GLDVGVLINN  139 (255)
Q Consensus       130 ~~~id~lv~n  139 (255)
                      ...+|+++..
T Consensus       100 ~~~~D~Ivse  109 (311)
T d2fyta1         100 VEKVDVIISE  109 (311)
T ss_dssp             CSCEEEEEEC
T ss_pred             cccceEEEEe
Confidence            2357788864

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.02  E-value=0.011  Score=42.44  Aligned_cols=34  Identities=24%  Similarity=0.218  Sum_probs=30.9

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhh
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK   89 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~   89 (255)
                      .+.|.|+ |.+|..++..|++.|++|.+++|++..
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            4788888 999999999999999999999998754

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=94.83  E-value=0.71  Score=36.67  Aligned_cols=80  Identities=14%  Similarity=0.013  Sum_probs=51.8

Q ss_pred             CCcEEEEECCCC-chHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcC-CceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           52 YGSWALVTGPTD-GIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYA-KTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        52 ~gk~vlITGas~-gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      +|+.||=..+.. |++.    ++++.|+ +|+.++.++..++.+.+.....+- ..++.++..|..    +..++..+. 
T Consensus       144 ~g~~VLdlf~~~G~~sl----~aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~----~~l~~~~~~-  214 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSV----AAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF----DYFKYARRH-  214 (317)
T ss_dssp             BTCEEEEETCTTTHHHH----HHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH----HHHHHHHHT-
T ss_pred             CCCceeecCCCCcHHHH----HHHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH----HHHHHHHhh-
Confidence            478888776664 4443    4556787 699999999998888887765442 234666665543    333434332 


Q ss_pred             cCCCccEEEEecC
Q 025260          129 EGLDVGVLINNVG  141 (255)
Q Consensus       129 ~~~~id~lv~nag  141 (255)
                       +..+|++|.+.-
T Consensus       215 -~~~fD~Ii~DPP  226 (317)
T d2b78a2         215 -HLTYDIIIIDPP  226 (317)
T ss_dssp             -TCCEEEEEECCC
T ss_pred             -cCCCCEEEEcCh
Confidence             336779998754

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=94.81  E-value=0.008  Score=45.27  Aligned_cols=87  Identities=11%  Similarity=0.026  Sum_probs=55.3

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHH------HHHHHHHhhcCCceEEEEEEECCCCcHHHH-H
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLK------DVSDSIQAKYAKTQIKSVVVDFSGDLDEGV-E  122 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~------~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~  122 (255)
                      .+.||++.|.|. |.||+++|+.+...|++|+..++......      ...+++-+   ..++..+.+..+++-+..+ +
T Consensus        42 ~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~~l~~---~~D~v~~~~plt~~T~~li~~  117 (199)
T d1dxya1          42 ELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLFK---QSDVIDLHVPGIEQNTHIINE  117 (199)
T ss_dssp             CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSCCTTCEECCHHHHHH---HCSEEEECCCCCGGGTTSBCH
T ss_pred             cccceeeeeeec-ccccccccccccccceeeeccCCccchhhhcchhHHHHHHHHH---hcccceeeecccccccccccH
Confidence            467999999986 57999999999999999999998643211      01122222   3567777777775433332 3


Q ss_pred             HHHHHhcCCCccEEEEecCCC
Q 025260          123 RIKEAIEGLDVGVLINNVGIS  143 (255)
Q Consensus       123 ~~~~~~~~~~id~lv~nag~~  143 (255)
                      +..+.+++ +  .++-|+|..
T Consensus       118 ~~l~~mk~-~--a~lIN~aRG  135 (199)
T d1dxya1         118 AAFNLMKP-G--AIVINTARP  135 (199)
T ss_dssp             HHHHHSCT-T--EEEEECSCT
T ss_pred             HHhhccCC-c--eEEEecccH
Confidence            33444443 2  565666653

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=94.48  E-value=0.038  Score=39.87  Aligned_cols=41  Identities=27%  Similarity=0.426  Sum_probs=33.7

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCC--cEEEEeCChhhHHHHHH
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNPDKLKDVSD   95 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~~~~~~~~~   95 (255)
                      |.++|.|+ |-||.++|+.|.+.|+  +|+..||+++.++.+.+
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~   44 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD   44 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHH
Confidence            34778875 8999999999999996  68889999887776554

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.38  E-value=0.23  Score=36.73  Aligned_cols=74  Identities=18%  Similarity=0.159  Sum_probs=53.1

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      +.+||=.||+.|.   ++..|++.|++|+.+|.+++.++.+.+.....+.  .+..+..|..+-          .++...
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~--~~~~~~~d~~~l----------~~~~~~  102 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRES--NVEFIVGDARKL----------SFEDKT  102 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CCEEEECCTTSC----------CSCTTC
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccccc--cccccccccccc----------cccCcC
Confidence            4568999999887   7778899999999999999998888877766543  345555565531          122235


Q ss_pred             ccEEEEecC
Q 025260          133 VGVLINNVG  141 (255)
Q Consensus       133 id~lv~nag  141 (255)
                      +|+++.+..
T Consensus       103 fD~I~~~~~  111 (226)
T d1ve3a1         103 FDYVIFIDS  111 (226)
T ss_dssp             EEEEEEESC
T ss_pred             ceEEEEecc
Confidence            778887654

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=94.30  E-value=0.042  Score=39.02  Aligned_cols=40  Identities=18%  Similarity=0.304  Sum_probs=33.2

Q ss_pred             EEEECCCCchHHHHHHHHHHcC-CcEEEEeCChhhHHHHHHH
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDS   96 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G-~~V~l~~r~~~~~~~~~~~   96 (255)
                      +.+.|+ |-+|.++++.|.+.| .+|.+.+|++++.++..++
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            455665 899999999999888 7999999999887766554

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.26  E-value=0.035  Score=39.54  Aligned_cols=37  Identities=14%  Similarity=0.321  Sum_probs=32.3

Q ss_pred             CCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHH
Q 025260           61 PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI   97 (255)
Q Consensus        61 as~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~   97 (255)
                      |.|-+|.++++.|.+.|+++++.+|+.++.++..++.
T Consensus         7 G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           7 GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            6788999999999999999999999998877766554

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.24  E-value=0.029  Score=40.31  Aligned_cols=39  Identities=33%  Similarity=0.497  Sum_probs=32.5

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHH
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSD   95 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~   95 (255)
                      +-|.| -|-+|.++|+.|++.|++|++.+|++++.++..+
T Consensus         3 IgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~   41 (161)
T d1vpda2           3 VGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA   41 (161)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             EEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH
Confidence            34444 5899999999999999999999999988776543

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=94.05  E-value=0.3  Score=32.72  Aligned_cols=80  Identities=10%  Similarity=0.140  Sum_probs=56.6

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC-CcHHHHHHHHHHhcCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG-DLDEGVERIKEAIEGL  131 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~  131 (255)
                      ||+|||.=-+.-+-..+...|.+.|++|+..+.+..+.   .+.+++.  ..++..++.++.+ +--+.++++++..+..
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~a---l~~~~~~--~~dliilD~~mp~~~G~e~~~~ir~~~~~~   75 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREA---VEKYKEL--KPDIVTMDITMPEMNGIDAIKEIMKIDPNA   75 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHH---HHHHHHH--CCSEEEEECSCGGGCHHHHHHHHHHHCTTC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHH---HHHHHhc--cCCEEEEecCCCCCCHHHHHHHHHHhCCCC
Confidence            78899998888999999999999999998766665443   3333333  3467777777765 3456778888766655


Q ss_pred             CccEEEEe
Q 025260          132 DVGVLINN  139 (255)
Q Consensus       132 ~id~lv~n  139 (255)
                      +  +++..
T Consensus        76 p--vi~ls   81 (118)
T d1u0sy_          76 K--IIVCS   81 (118)
T ss_dssp             C--EEEEE
T ss_pred             c--EEEEE
Confidence            5  66554

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.94  E-value=0.29  Score=38.93  Aligned_cols=76  Identities=13%  Similarity=0.104  Sum_probs=52.4

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      .+||+||-.|++.|+   ++..++++|+ +|+.++.++. ...+.+..+..+...++..+..|..+-          ..+
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~----------~~~   97 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEV----------ELP   97 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTC----------CCS
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHc----------ccc
Confidence            469999999999885   5677888897 6999997754 455555555544455688888877652          123


Q ss_pred             CCCccEEEEec
Q 025260          130 GLDVGVLINNV  140 (255)
Q Consensus       130 ~~~id~lv~na  140 (255)
                      ...+|+++...
T Consensus        98 ~~~~D~ivs~~  108 (316)
T d1oria_          98 VEKVDIIISEW  108 (316)
T ss_dssp             SSCEEEEEECC
T ss_pred             cceeEEEeeee
Confidence            33577887653

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=93.72  E-value=0.053  Score=39.54  Aligned_cols=45  Identities=13%  Similarity=-0.017  Sum_probs=39.1

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHh
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQA   99 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~   99 (255)
                      +|++||..||+.|   ..+..|+++|++|+.+|.+++.++.+.+..++
T Consensus        20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~   64 (201)
T d1pjza_          20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGE   64 (201)
T ss_dssp             TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCS
T ss_pred             CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhcc
Confidence            4889999999988   47779999999999999999999888776643

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.68  E-value=0.057  Score=38.32  Aligned_cols=36  Identities=19%  Similarity=0.141  Sum_probs=29.2

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD   88 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~   88 (255)
                      +.++++-.+++.||.++|..|+++|++|.++.+.+.
T Consensus        40 ~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          40 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            344444456789999999999999999999998754

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.55  E-value=0.085  Score=40.28  Aligned_cols=47  Identities=19%  Similarity=0.203  Sum_probs=40.2

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHH
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSI   97 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~   97 (255)
                      +++||+++|-|- |.+|..+|+.|.+.|++|+..+.+...++....+.
T Consensus        36 ~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~   82 (230)
T d1leha1          36 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE   82 (230)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhc
Confidence            466999999875 68999999999999999999999988877666543

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.34  E-value=0.51  Score=34.80  Aligned_cols=75  Identities=16%  Similarity=0.225  Sum_probs=52.1

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      +++|++||=-|+++|.   ++.+++.+|+ +|+.++.++..++.+.+.++..  +....++..|..+            +
T Consensus        44 dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~--~~~~~~~~~d~~~------------~  106 (201)
T d1wy7a1          44 DIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEF--KGKFKVFIGDVSE------------F  106 (201)
T ss_dssp             SSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGG--TTSEEEEESCGGG------------C
T ss_pred             CCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHc--CCCceEEECchhh------------h
Confidence            3569999999988772   3445567886 8999999999888887776554  3445556555432            1


Q ss_pred             cCCCccEEEEecCC
Q 025260          129 EGLDVGVLINNVGI  142 (255)
Q Consensus       129 ~~~~id~lv~nag~  142 (255)
                      + .++|++|.|.-.
T Consensus       107 ~-~~fD~Vi~nPP~  119 (201)
T d1wy7a1         107 N-SRVDIVIMNPPF  119 (201)
T ss_dssp             C-CCCSEEEECCCC
T ss_pred             C-CcCcEEEEcCcc
Confidence            1 257799988754

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.32  E-value=0.06  Score=36.71  Aligned_cols=35  Identities=29%  Similarity=0.399  Sum_probs=30.4

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD   88 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~   88 (255)
                      +|.++|.|| |-+|.++|..|+++|.+|.++.+.+.
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            577777775 68999999999999999999998764

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=93.31  E-value=0.5  Score=33.90  Aligned_cols=76  Identities=17%  Similarity=0.215  Sum_probs=51.9

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      ...|+|.||. --|.+-++...+.|++|.+.|.+.+.+++.......     .+..   -..++     +.+.+.+.+-|
T Consensus        32 pa~V~ViGaG-vaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~-----~~~~---~~~~~-----~~l~~~~~~aD   97 (168)
T d1pjca1          32 PGKVVILGGG-VVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS-----RVEL---LYSNS-----AEIETAVAEAD   97 (168)
T ss_dssp             CCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG-----GSEE---EECCH-----HHHHHHHHTCS
T ss_pred             CcEEEEECCC-hHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc-----ccee---ehhhh-----hhHHHhhccCc
Confidence            4678888764 688999999999999999999999988766554422     1111   11222     34455555445


Q ss_pred             ccEEEEecCCCC
Q 025260          133 VGVLINNVGISY  144 (255)
Q Consensus       133 id~lv~nag~~~  144 (255)
                        ++|..+-+..
T Consensus        98 --ivI~aalipG  107 (168)
T d1pjca1          98 --LLIGAVLVPG  107 (168)
T ss_dssp             --EEEECCCCTT
T ss_pred             --EEEEeeecCC
Confidence              9999887654

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=93.20  E-value=0.044  Score=40.62  Aligned_cols=39  Identities=23%  Similarity=0.314  Sum_probs=32.1

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHH
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVS   94 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~   94 (255)
                      .+.|.||+ ..|.++|..|++.|.+|.+.+|+++..++..
T Consensus         9 KI~ViGaG-~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~   47 (189)
T d1n1ea2           9 KAVVFGSG-AFGTALAMVLSKKCREVCVWHMNEEEVRLVN   47 (189)
T ss_dssp             EEEEECCS-HHHHHHHHHHHTTEEEEEEECSCHHHHHHHH
T ss_pred             eEEEECCC-HHHHHHHHHHHHcCCeEEEEEecHHHHHHHh
Confidence            46677764 5999999999999999999999987666543

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.19  E-value=0.063  Score=40.03  Aligned_cols=37  Identities=16%  Similarity=0.115  Sum_probs=31.1

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~   93 (255)
                      +.|. |.|.+|..+|..|+++|++|+..|.+++..++.
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l   39 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI   39 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence            4455 778999999999999999999999998765543

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.12  E-value=0.12  Score=35.21  Aligned_cols=33  Identities=21%  Similarity=0.196  Sum_probs=29.5

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP   87 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~   87 (255)
                      |+++|.||+ -||.++|..|++.|.+|.++.|.+
T Consensus        23 k~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVGAG-YIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeecc
Confidence            678888875 699999999999999999999874

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.09  E-value=0.26  Score=36.89  Aligned_cols=80  Identities=15%  Similarity=0.013  Sum_probs=54.9

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      +|.+||-.|+.+|--.++.-++...+.+|+.++.+++..+.+.+.+.+.. ...+.....|..+.          .....
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~-~~n~~~~~~d~~~~----------~~~~~  143 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG-IENVIFVCGDGYYG----------VPEFS  143 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT-CCSEEEEESCGGGC----------CGGGC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhc-ccccccccCchHHc----------ccccc
Confidence            37899999999887777666666566799999999999988888876643 33455554444321          11122


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      .+|.++.+++.
T Consensus       144 ~fD~I~~~~~~  154 (213)
T d1dl5a1         144 PYDVIFVTVGV  154 (213)
T ss_dssp             CEEEEEECSBB
T ss_pred             chhhhhhhccH
Confidence            47788887764

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=93.06  E-value=0.31  Score=37.54  Aligned_cols=73  Identities=18%  Similarity=0.183  Sum_probs=51.0

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .+|++||=.|+++|+   ++..+++.|++|+.+|.++..++.+.+..+..+.+  ..+...|.           .+..+.
T Consensus       119 ~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~--~~~~~~d~-----------~~~~~~  182 (254)
T d2nxca1         119 RPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSL-----------EAALPF  182 (254)
T ss_dssp             CTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCH-----------HHHGGG
T ss_pred             CccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCc--eeEEeccc-----------cccccc
Confidence            348999999999986   34467788999999999999999888877665433  33333332           112333


Q ss_pred             CCccEEEEe
Q 025260          131 LDVGVLINN  139 (255)
Q Consensus       131 ~~id~lv~n  139 (255)
                      ...|+++.|
T Consensus       183 ~~fD~V~an  191 (254)
T d2nxca1         183 GPFDLLVAN  191 (254)
T ss_dssp             CCEEEEEEE
T ss_pred             cccchhhhc
Confidence            357788876

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.06  E-value=0.071  Score=36.39  Aligned_cols=35  Identities=23%  Similarity=0.173  Sum_probs=29.8

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP   87 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~   87 (255)
                      ++|.++|.|| |.+|.++|..|+++|.+|.++.+.+
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            3677777755 6999999999999999999998765

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=92.91  E-value=0.42  Score=34.27  Aligned_cols=75  Identities=9%  Similarity=0.197  Sum_probs=40.7

Q ss_pred             EEEEECCCCchHHHHHHHHHHc-----CCcEEEEeCChhhHHHHHHHHHh---h-cCCceEEEEEEECCCCcHHHHHHHH
Q 025260           55 WALVTGPTDGIGKSFAFQLAKT-----GLNLVLVGRNPDKLKDVSDSIQA---K-YAKTQIKSVVVDFSGDLDEGVERIK  125 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~-----G~~V~l~~r~~~~~~~~~~~~~~---~-~~~~~~~~~~~d~~~~~~~~~~~~~  125 (255)
                      .+.|.||++.....+...+.++     +.++++.|.++++++...+.++.   . +...++..  .  +        ..+
T Consensus         5 KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~--------d~~   72 (167)
T d1u8xx1           5 SIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAA--T--T--------DPE   72 (167)
T ss_dssp             EEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEE--E--S--------CHH
T ss_pred             eEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEe--c--C--------Chh
Confidence            4566677553222233333332     24799999999988755444432   2 11222221  1  1        234


Q ss_pred             HHhcCCCccEEEEecCCC
Q 025260          126 EAIEGLDVGVLINNVGIS  143 (255)
Q Consensus       126 ~~~~~~~id~lv~nag~~  143 (255)
                      +++.+  -|++|+.+|..
T Consensus        73 eal~~--AD~Vvitag~~   88 (167)
T d1u8xx1          73 EAFTD--VDFVMAHIRVG   88 (167)
T ss_dssp             HHHSS--CSEEEECCCTT
T ss_pred             hccCC--CCEEEECCCcC
Confidence            55554  44999999975

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=92.86  E-value=0.13  Score=38.02  Aligned_cols=83  Identities=10%  Similarity=0.137  Sum_probs=62.5

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      +.++=+|-|+||..+++.+.+ . +.+|+.+|++++.++.+.+.++..  +.++.++..+..+-     +.+...++...
T Consensus        25 ~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~--~~r~~~~~~~f~~~-----~~~~~~~~~~~   95 (192)
T d1m6ya2          25 KIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEF--SDRVSLFKVSYREA-----DFLLKTLGIEK   95 (192)
T ss_dssp             CEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGG--TTTEEEEECCGGGH-----HHHHHHTTCSC
T ss_pred             CEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccc--cccccchhHHHhhH-----HHHHHHcCCCC
Confidence            455667889999999998887 3 579999999999988887776543  34678888877642     44555555557


Q ss_pred             ccEEEEecCCCC
Q 025260          133 VGVLINNVGISY  144 (255)
Q Consensus       133 id~lv~nag~~~  144 (255)
                      +|.++...|++.
T Consensus        96 vdgIl~DlGvSs  107 (192)
T d1m6ya2          96 VDGILMDLGVST  107 (192)
T ss_dssp             EEEEEEECSCCH
T ss_pred             cceeeeccchhH
Confidence            889999999863

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=92.82  E-value=0.57  Score=33.61  Aligned_cols=76  Identities=14%  Similarity=0.163  Sum_probs=42.5

Q ss_pred             EEEEECCCCchHH--HHHHHHHHc----CCcEEEEeCChhhHHHHHHHHHhhc--CCceEEEEEEECCCCcHHHHHHHHH
Q 025260           55 WALVTGPTDGIGK--SFAFQLAKT----GLNLVLVGRNPDKLKDVSDSIQAKY--AKTQIKSVVVDFSGDLDEGVERIKE  126 (255)
Q Consensus        55 ~vlITGas~gIG~--~la~~la~~----G~~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~  126 (255)
                      .+.|.|| |.+|.  ++...+++.    +.++++.|.++++++.....++...  ..........   .       ...+
T Consensus         4 KI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~---t-------d~~e   72 (171)
T d1obba1           4 KIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT---M-------NLDD   72 (171)
T ss_dssp             EEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE---S-------CHHH
T ss_pred             EEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe---C-------Chhh
Confidence            4566775 44554  455455542    3589999999988776554444311  1122222221   1       2444


Q ss_pred             HhcCCCccEEEEecCCC
Q 025260          127 AIEGLDVGVLINNVGIS  143 (255)
Q Consensus       127 ~~~~~~id~lv~nag~~  143 (255)
                      .+.+  .|++|+.++..
T Consensus        73 aL~d--ad~Vv~~~~~g   87 (171)
T d1obba1          73 VIID--ADFVINTAMVG   87 (171)
T ss_dssp             HHTT--CSEEEECCCTT
T ss_pred             cccC--CCeEeeecccc
Confidence            5554  45999998875

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=92.77  E-value=0.16  Score=34.21  Aligned_cols=34  Identities=12%  Similarity=0.173  Sum_probs=29.1

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP   87 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~   87 (255)
                      .|.++|.|| |-+|.++|..|++.|.+|.++.|.+
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            366777776 5899999999999999999999864

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.70  E-value=0.25  Score=39.47  Aligned_cols=76  Identities=14%  Similarity=0.127  Sum_probs=52.6

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      .+|++||-.|++.|+   ++..++++|+ +|+.++.++ ..+.+.+..++.+...++..+..|..+-          .++
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l----------~~~  102 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDV----------HLP  102 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTS----------CCS
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhc----------cCc
Confidence            469999999999884   5667788897 688888774 4555555566655566788888777642          123


Q ss_pred             CCCccEEEEec
Q 025260          130 GLDVGVLINNV  140 (255)
Q Consensus       130 ~~~id~lv~na  140 (255)
                      ...+|+++...
T Consensus       103 ~~~~D~i~se~  113 (328)
T d1g6q1_         103 FPKVDIIISEW  113 (328)
T ss_dssp             SSCEEEEEECC
T ss_pred             ccceeEEEEEe
Confidence            33577887654

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.63  E-value=0.17  Score=34.31  Aligned_cols=34  Identities=18%  Similarity=0.253  Sum_probs=29.2

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD   88 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~   88 (255)
                      |.++|.|| |-||.++|..|++.|.+|.++.+.+.
T Consensus        24 ~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          24 KRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            67777776 58999999999999999999988653

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=92.53  E-value=0.35  Score=38.54  Aligned_cols=82  Identities=16%  Similarity=0.185  Sum_probs=53.7

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      +|+.||=.++..| |.++  ++++.|.+|+.++.++..++.+.+.++..+- ..+.++..|..    +..+.+..  .+.
T Consensus       145 ~g~rVLDl~~gtG-~~s~--~~a~g~~~V~~vD~s~~al~~a~~n~~~ngl-~~~~~i~~d~~----~~~~~~~~--~~~  214 (318)
T d1wxxa2         145 RGERALDVFSYAG-GFAL--HLALGFREVVAVDSSAEALRRAEENARLNGL-GNVRVLEANAF----DLLRRLEK--EGE  214 (318)
T ss_dssp             CEEEEEEETCTTT-HHHH--HHHHHEEEEEEEESCHHHHHHHHHHHHHTTC-TTEEEEESCHH----HHHHHHHH--TTC
T ss_pred             CCCeeeccCCCCc-HHHH--HHHhcCCcEEeecchHHHHHHHHHHHHHcCC-CCcceeeccHH----HHhhhhHh--hhc
Confidence            5888888887755 3333  3455677999999999999988888776542 34556655543    33333333  223


Q ss_pred             CccEEEEecCCC
Q 025260          132 DVGVLINNVGIS  143 (255)
Q Consensus       132 ~id~lv~nag~~  143 (255)
                      .+|.+|.++-..
T Consensus       215 ~fD~Vi~DpP~~  226 (318)
T d1wxxa2         215 RFDLVVLDPPAF  226 (318)
T ss_dssp             CEEEEEECCCCS
T ss_pred             CCCEEEEcCCcc
Confidence            577999887543

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.43  E-value=0.11  Score=34.90  Aligned_cols=34  Identities=18%  Similarity=0.223  Sum_probs=29.6

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD   88 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~   88 (255)
                      |.++|.|| |-+|.++|..|++.|.+|.++.|.+.
T Consensus        23 ~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          23 KSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            67788876 58999999999999999999988754

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.33  E-value=0.34  Score=36.35  Aligned_cols=78  Identities=14%  Similarity=0.164  Sum_probs=57.6

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      |..||..|+.+|--.++.-++.  |.+|+.++++++-.+.+.+.+.+.+ -.++.+...|..+-          .....+
T Consensus        79 g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g-~~nv~~~~gd~~~g----------~~~~~p  145 (215)
T d1jg1a_          79 GMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAG-VKNVHVILGDGSKG----------FPPKAP  145 (215)
T ss_dssp             TCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTT-CCSEEEEESCGGGC----------CGGGCC
T ss_pred             cceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcC-CceeEEEECccccC----------CcccCc
Confidence            7889999999999999888776  5679999999888777777777654 45677777766531          112235


Q ss_pred             ccEEEEecCCC
Q 025260          133 VGVLINNVGIS  143 (255)
Q Consensus       133 id~lv~nag~~  143 (255)
                      .|.++.+++..
T Consensus       146 fD~Iiv~~a~~  156 (215)
T d1jg1a_         146 YDVIIVTAGAP  156 (215)
T ss_dssp             EEEEEECSBBS
T ss_pred             ceeEEeecccc
Confidence            77888887764

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=92.32  E-value=0.13  Score=35.09  Aligned_cols=52  Identities=13%  Similarity=0.063  Sum_probs=38.1

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD  116 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  116 (255)
                      |+++|.|. +.+|.+++++|  +|.+|++++.+++..+...    ..    .+.++..|.++.
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~----~~----~~~~i~Gd~~~~   52 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVL----RS----GANFVHGDPTRV   52 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHH----HT----TCEEEESCTTSH
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHH----hc----CccccccccCCH
Confidence            56888875 78999999999  4667888999888765442    21    346677888764

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=92.32  E-value=0.21  Score=35.99  Aligned_cols=78  Identities=15%  Similarity=0.194  Sum_probs=47.2

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      +|+.||=.|+++|.   ++.+++++|++|+.++.++...+.+.+.++..+-..++...++|      .......  ....
T Consensus        41 ~g~~vLDl~~G~G~---~~i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d------~~~~~~~--~~~~  109 (171)
T d1ws6a1          41 RRGRFLDPFAGSGA---VGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVE------VFLPEAK--AQGE  109 (171)
T ss_dssp             TCCEEEEETCSSCH---HHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHH------HHHHHHH--HTTC
T ss_pred             CCCeEEEeccccch---hhhhhhhccchhhhcccCHHHHhhhhHHHHhhccccceeeeehh------ccccccc--ccCC
Confidence            36666666665542   44567788999999999999988888877765434333222111      2212222  2333


Q ss_pred             CccEEEEec
Q 025260          132 DVGVLINNV  140 (255)
Q Consensus       132 ~id~lv~na  140 (255)
                      .+|+++.+.
T Consensus       110 ~fD~If~DP  118 (171)
T d1ws6a1         110 RFTVAFMAP  118 (171)
T ss_dssp             CEEEEEECC
T ss_pred             ccceeEEcc
Confidence            577988764

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.08  E-value=0.038  Score=47.78  Aligned_cols=56  Identities=9%  Similarity=0.153  Sum_probs=40.8

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh-------------------hhHHHHHHHHHhhcCCceE
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP-------------------DKLKDVSDSIQAKYAKTQI  106 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~-------------------~~~~~~~~~~~~~~~~~~~  106 (255)
                      .+.+..|+|.|+ ||+|.++++.|+..|. ++.++|.+.                   .+.+.+.+.+.+.+|..++
T Consensus        22 ~L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i   97 (529)
T d1yova1          22 ALESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSG   97 (529)
T ss_dssp             HHHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBC
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcE
Confidence            355788999987 7999999999999997 788887532                   2455556667666555443

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.05  E-value=0.21  Score=35.21  Aligned_cols=78  Identities=17%  Similarity=0.155  Sum_probs=53.0

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      .+|+.||=.|+.+|   ++..+.+.+|+ +|+.++.+++..+.+.+.+...+...++.++..|..    +   .+..  .
T Consensus        13 ~~g~~vlDl~~GtG---~~~iea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~----~---~l~~--~   80 (152)
T d2esra1          13 FNGGRVLDLFAGSG---GLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAE----R---AIDC--L   80 (152)
T ss_dssp             CCSCEEEEETCTTC---HHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHH----H---HHHH--B
T ss_pred             CCCCeEEEcCCccC---HHHHHHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhccccc----c---cccc--c
Confidence            45899988887766   24445677887 899999999998888887776654556777666543    2   2222  2


Q ss_pred             CCCccEEEEec
Q 025260          130 GLDVGVLINNV  140 (255)
Q Consensus       130 ~~~id~lv~na  140 (255)
                      ....|+++.++
T Consensus        81 ~~~fDiIf~DP   91 (152)
T d2esra1          81 TGRFDLVFLDP   91 (152)
T ss_dssp             CSCEEEEEECC
T ss_pred             ccccceeEech
Confidence            23577887654

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=91.99  E-value=0.51  Score=35.02  Aligned_cols=76  Identities=16%  Similarity=0.039  Sum_probs=52.7

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      +++||=.||+.|.-   +..++++|++|+.++.+++.++.+.+.+.+.+ ..++.+...|..+-          .++...
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~-~~~i~~~~~d~~~l----------~~~~~~   81 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNG-HQQVEYVQGDAEQM----------PFTDER   81 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTT-CCSEEEEECCC-CC----------CSCTTC
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhcccccc-cccccccccccccc----------cccccc
Confidence            67899999998844   46688999999999999998887776665543 34566777766542          122224


Q ss_pred             ccEEEEecCC
Q 025260          133 VGVLINNVGI  142 (255)
Q Consensus       133 id~lv~nag~  142 (255)
                      +|+++.+...
T Consensus        82 fD~v~~~~~l   91 (231)
T d1vl5a_          82 FHIVTCRIAA   91 (231)
T ss_dssp             EEEEEEESCG
T ss_pred             cccccccccc
Confidence            6677766544

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=91.96  E-value=0.069  Score=41.54  Aligned_cols=38  Identities=24%  Similarity=0.398  Sum_probs=33.0

Q ss_pred             cCCcEEEEECCCCchHHHH-----HHHHHHcCCcEEEEeCChh
Q 025260           51 KYGSWALVTGPTDGIGKSF-----AFQLAKTGLNLVLVGRNPD   88 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~l-----a~~la~~G~~V~l~~r~~~   88 (255)
                      ..|+.++|+.|-||.|+..     |..|+++|.+|.++|-++.
T Consensus        17 ~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          17 RNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             cCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            4578888888899999986     7999999999999998864

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=91.83  E-value=0.06  Score=40.03  Aligned_cols=31  Identities=19%  Similarity=0.219  Sum_probs=28.0

Q ss_pred             cEEEEECCCCchHHH-----HHHHHHHcCCcEEEEe
Q 025260           54 SWALVTGPTDGIGKS-----FAFQLAKTGLNLVLVG   84 (255)
Q Consensus        54 k~vlITGas~gIG~~-----la~~la~~G~~V~l~~   84 (255)
                      |..+|||-++|.|+.     +|..|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            789999999999985     6789999999999987

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=91.80  E-value=0.12  Score=34.79  Aligned_cols=36  Identities=22%  Similarity=0.265  Sum_probs=30.9

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD   88 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~   88 (255)
                      .+|.++|.|| |-+|.++|..|++.|.+|.++.|.+.
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            3688888776 58999999999999999999998753

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=91.77  E-value=0.3  Score=35.48  Aligned_cols=76  Identities=14%  Similarity=0.143  Sum_probs=54.4

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      +|.+|+=.|+++|   .++.++++.+.+|+.++.+++.++.+.+.+++.+-..++.++..|..        +..  .+..
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~--------~~~--~~~~   99 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP--------EAL--CKIP   99 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH--------HHH--TTSC
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchh--------hcc--cccC
Confidence            4788998998877   44556677788999999999999999998887654456777666532        121  1223


Q ss_pred             CccEEEEec
Q 025260          132 DVGVLINNV  140 (255)
Q Consensus       132 ~id~lv~na  140 (255)
                      .+|.++.+.
T Consensus       100 ~~D~v~~~~  108 (186)
T d1l3ia_         100 DIDIAVVGG  108 (186)
T ss_dssp             CEEEEEESC
T ss_pred             CcCEEEEeC
Confidence            577888654

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=91.68  E-value=0.15  Score=34.37  Aligned_cols=34  Identities=18%  Similarity=0.136  Sum_probs=29.4

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP   87 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~   87 (255)
                      .+.++|.|| |-||.++|..|++.|.+|.++.+.+
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            367888876 5899999999999999999998765

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=91.61  E-value=0.12  Score=36.51  Aligned_cols=36  Identities=11%  Similarity=0.053  Sum_probs=28.9

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHH
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKD   92 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~   92 (255)
                      +-|. |.|-+|.++|+.|+++|++|+..+++.++...
T Consensus         3 IgiI-G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~   38 (152)
T d1i36a2           3 VGFI-GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTI   38 (152)
T ss_dssp             EEEE-SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHH
T ss_pred             EEEE-cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHH
Confidence            3444 55999999999999999999999887765443

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.49  E-value=0.11  Score=35.29  Aligned_cols=35  Identities=29%  Similarity=0.353  Sum_probs=29.2

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD   88 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~   88 (255)
                      +|.++|.|| |-+|.++|..|+++|.+|.++.|.+.
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence            366777665 68999999999999999999998753

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.45  E-value=1.3  Score=31.49  Aligned_cols=34  Identities=15%  Similarity=-0.024  Sum_probs=23.0

Q ss_pred             EEEEC-CCCchHHHHHHHHHHcC----CcEEEEeCChhh
Q 025260           56 ALVTG-PTDGIGKSFAFQLAKTG----LNLVLVGRNPDK   89 (255)
Q Consensus        56 vlITG-as~gIG~~la~~la~~G----~~V~l~~r~~~~   89 (255)
                      +.|.| ||.|.+..++.-+....    .++++.|.+++.
T Consensus         4 I~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~   42 (169)
T d1s6ya1           4 IATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGK   42 (169)
T ss_dssp             EEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGH
T ss_pred             EEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccH
Confidence            44555 46677777766665432    489999998864

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=91.29  E-value=0.064  Score=36.18  Aligned_cols=34  Identities=18%  Similarity=0.094  Sum_probs=28.5

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD   88 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~   88 (255)
                      |.++|.|| |-+|.++|..|++.|.+|.++.|.+.
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            56666665 68999999999999999999998753

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.12  E-value=0.27  Score=37.22  Aligned_cols=59  Identities=15%  Similarity=0.104  Sum_probs=46.8

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG  115 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  115 (255)
                      +++.+|=.||+.|   ..+..|+++|++|+.++.++..++.+.+...+.+  .++.+...|..+
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~--~~i~~~~~d~~~   99 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERN--LKIEFLQGDVLE   99 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCCEEEESCGGG
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeecccccccccccccccc--ccchheehhhhh
Confidence            3678999999987   5567899999999999999998888888776653  356667777654

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.08  E-value=0.49  Score=35.59  Aligned_cols=82  Identities=13%  Similarity=0.091  Sum_probs=58.6

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcC----CceEEEEEEECCCCcHHHHHHHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYA----KTQIKSVVVDFSGDLDEGVERIKEA  127 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~  127 (255)
                      +|..||-.|+.+|.-.++.-++.....+|+.++++++-.+.+.+.+++...    ...+.....|..+.          .
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~----------~  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG----------Y  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC----------C
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccc----------c
Confidence            378999999999998888888888888999999999988888877765331    12345555554321          1


Q ss_pred             hcCCCccEEEEecCCC
Q 025260          128 IEGLDVGVLINNVGIS  143 (255)
Q Consensus       128 ~~~~~id~lv~nag~~  143 (255)
                      .....+|.++.+++..
T Consensus       146 ~~~~~fD~I~~~~~~~  161 (224)
T d1i1na_         146 AEEAPYDAIHVGAAAP  161 (224)
T ss_dssp             GGGCCEEEEEECSBBS
T ss_pred             chhhhhhhhhhhcchh
Confidence            1222577998887653

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=90.99  E-value=0.7  Score=35.69  Aligned_cols=77  Identities=14%  Similarity=0.017  Sum_probs=54.0

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHc-CCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~-G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      +|.+||=.||+.|.   ++..|+++ |++|+.++-++..++.+.+.....+-..++.+..+|..+-          .++.
T Consensus        67 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l----------~~~~  133 (282)
T d2o57a1          67 RQAKGLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI----------PCED  133 (282)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC----------SSCT
T ss_pred             CCCEEEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhcccccccccccccccccccccc----------cccc
Confidence            47889999998773   45556654 8999999999998888877777665556788888887642          1222


Q ss_pred             CCccEEEEecC
Q 025260          131 LDVGVLINNVG  141 (255)
Q Consensus       131 ~~id~lv~nag  141 (255)
                      ..+|+++.+-.
T Consensus       134 ~sfD~V~~~~~  144 (282)
T d2o57a1         134 NSYDFIWSQDA  144 (282)
T ss_dssp             TCEEEEEEESC
T ss_pred             cccchhhccch
Confidence            34667765543

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=90.85  E-value=0.15  Score=38.45  Aligned_cols=33  Identities=30%  Similarity=0.434  Sum_probs=27.8

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP   87 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~   87 (255)
                      |.|+|.|| |-.|.+.|.+|+++|++|.+++|+.
T Consensus         7 ~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           7 KRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            45777776 5789999999999999999999853

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=90.55  E-value=0.12  Score=39.72  Aligned_cols=34  Identities=24%  Similarity=0.305  Sum_probs=28.2

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP   87 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~   87 (255)
                      +|.|+|.||. -=|...|.+|+++|++|.+..++.
T Consensus         1 ~KkV~IIGaG-~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAG-VSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCS-HHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECcC-HHHHHHHHHHHhCCCCEEEEeCCC
Confidence            5778888765 567899999999999999998753

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=90.52  E-value=0.15  Score=34.59  Aligned_cols=35  Identities=17%  Similarity=0.202  Sum_probs=30.1

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD   88 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~   88 (255)
                      .|.++|.|| |-||.++|..|++.|.+|.++.|++.
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            367778776 58999999999999999999988754

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.41  E-value=0.19  Score=37.92  Aligned_cols=44  Identities=11%  Similarity=-0.043  Sum_probs=37.3

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQ   98 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~   98 (255)
                      .|.+||.-|++.|   ..+..|+++|++|+.+|-++..++.+.++..
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~   88 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQN   88 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhh
Confidence            4788999999987   5688999999999999999998887766543

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=90.40  E-value=1.1  Score=31.43  Aligned_cols=84  Identities=19%  Similarity=0.174  Sum_probs=51.7

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCC-cHHHHHHHHH-Hhc
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGD-LDEGVERIKE-AIE  129 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~-~~~  129 (255)
                      +|+.+.|.+.|||.|--++..+.+.|.++.-  -++    ++.+++++.-+.....-=.+|+... ..+.+.++.+ ...
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~--l~~----~t~~~L~~~lp~~~~~~NPlD~~~~~~~~~~~~~l~~~~~   75 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLAT--LEE----KTIEELRSFLPPMAAVKNPVDMIASARGEDYYRTAKLLLQ   75 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECC--CCH----HHHHHHHHHSCTTCEESSEEECCTTCCHHHHHHHHHHHHH
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCC--CCH----HHHHHHHHhCCCcccCCCcccccCCCCHHHHHHHHHHHHc
Confidence            5899999999999999999999999966533  232    3444455444433333345566532 2344444444 445


Q ss_pred             CCCccEEEEecC
Q 025260          130 GLDVGVLINNVG  141 (255)
Q Consensus       130 ~~~id~lv~nag  141 (255)
                      +.++|.++....
T Consensus        76 d~~vd~v~v~~~   87 (163)
T d2csua3          76 DPNVDMLIAICV   87 (163)
T ss_dssp             STTCSEEEEEEE
T ss_pred             CCCcCEEEEeec
Confidence            556777665443

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.40  E-value=0.14  Score=38.36  Aligned_cols=34  Identities=21%  Similarity=0.405  Sum_probs=30.4

Q ss_pred             CcEEEEECCCCchHHH-----HHHHHHHcCCcEEEEeCC
Q 025260           53 GSWALVTGPTDGIGKS-----FAFQLAKTGLNLVLVGRN   86 (255)
Q Consensus        53 gk~vlITGas~gIG~~-----la~~la~~G~~V~l~~r~   86 (255)
                      ||++.|+|+-||.|+.     +|..|+++|.+|.++|-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            6899999999999985     678899999999999965

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.36  E-value=0.17  Score=38.16  Aligned_cols=36  Identities=22%  Similarity=0.241  Sum_probs=30.6

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP   87 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~   87 (255)
                      ..+|.|+|.||+ --|...|.+|+++|++|.+..++.
T Consensus        47 ~~~k~VvIIGaG-pAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVGAG-PSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCceEEEEccc-HHHHHHHHHHHHhccceeeEeecc
Confidence            457899999886 458999999999999999998764

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=90.32  E-value=0.22  Score=36.27  Aligned_cols=36  Identities=22%  Similarity=0.243  Sum_probs=31.1

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP   87 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~   87 (255)
                      .++|.|+|.||. --|.+.|..|+++|++|.+..++.
T Consensus        41 ~~~k~V~IIGaG-PAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          41 VQKKNLAVVGAG-PAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             SSCCEEEEECCS-HHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCcEEEEECcc-HHHHHHHHHHHhhccceEEEeccC
Confidence            457889999875 678999999999999999999874

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=90.27  E-value=0.15  Score=39.48  Aligned_cols=36  Identities=22%  Similarity=0.189  Sum_probs=31.6

Q ss_pred             ccccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEe
Q 025260           48 NLRKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG   84 (255)
Q Consensus        48 ~~~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~   84 (255)
                      ..+++|++++|.| .|.+|..+|+.|.+.|++|+.++
T Consensus        31 ~~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          31 NDTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             TCCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            3457799999999 68999999999999999988765

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.20  E-value=0.13  Score=37.33  Aligned_cols=35  Identities=17%  Similarity=0.187  Sum_probs=28.6

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChh
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPD   88 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~   88 (255)
                      +|.|+|.|| |-.|.+.|.+|+++|+ .|.+..|+..
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            567777776 4789999999999999 4989888753

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=90.19  E-value=0.2  Score=34.44  Aligned_cols=35  Identities=20%  Similarity=0.251  Sum_probs=30.0

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD   88 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~   88 (255)
                      +|.++|.|| |-+|.++|..|++.|.+|.++.+.+.
T Consensus        35 ~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          35 DNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            577777765 68999999999999999999998654

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=90.15  E-value=0.14  Score=39.43  Aligned_cols=31  Identities=35%  Similarity=0.433  Sum_probs=26.9

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCCh
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP   87 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~~   87 (255)
                      |+|.|| |-.|.++|.+|+++|.+|+++++++
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            666654 6899999999999999999999875

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=90.15  E-value=1.1  Score=29.67  Aligned_cols=80  Identities=18%  Similarity=0.203  Sum_probs=53.4

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC-CcHHHHHHHHHHhcCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG-DLDEGVERIKEAIEGL  131 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~  131 (255)
                      +|+|||.=-...+-..+.+.|.+.|++|.......+    +.+.+++.  ..++..++..+.+ +--+.++++++..+..
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~e----al~~~~~~--~~dlillD~~mP~~~G~el~~~lr~~~~~~   74 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQ----ALDIVTKE--RPDLVLLDMKIPGMDGIEILKRMKVIDENI   74 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHH----HHHHHHHH--CCSEEEEESCCTTCCHHHHHHHHHHHCTTC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHHH----HHHHHHhC--CCCEEEEeccCCCCCHHHHHHHHHHhCCCC
Confidence            467888888888888899999999999886543322    33334433  3456777777766 3356778888765544


Q ss_pred             CccEEEEec
Q 025260          132 DVGVLINNV  140 (255)
Q Consensus       132 ~id~lv~na  140 (255)
                      +  +++..+
T Consensus        75 p--vi~lt~   81 (119)
T d1peya_          75 R--VIIMTA   81 (119)
T ss_dssp             E--EEEEES
T ss_pred             c--EEEEec
Confidence            4  665544

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=90.11  E-value=0.21  Score=37.95  Aligned_cols=75  Identities=12%  Similarity=0.002  Sum_probs=54.8

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .+++.||=.|++.|.   ++..|+++|.+|+.+|.+++.++.+.+...+.+.  ++.++..|+.+-          ..+ 
T Consensus        36 ~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~--~v~~~~~d~~~~----------~~~-   99 (246)
T d1y8ca_          36 LVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNL----------NIN-   99 (246)
T ss_dssp             CCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGC----------CCS-
T ss_pred             CCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCc--cceeeccchhhh----------ccc-
Confidence            446889999999886   7889999999999999999999888877766543  455666665432          112 


Q ss_pred             CCccEEEEecC
Q 025260          131 LDVGVLINNVG  141 (255)
Q Consensus       131 ~~id~lv~nag  141 (255)
                      ..+|++++..+
T Consensus       100 ~~fD~i~~~~~  110 (246)
T d1y8ca_         100 RKFDLITCCLD  110 (246)
T ss_dssp             CCEEEEEECTT
T ss_pred             ccccccceeee
Confidence            25778876544

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=90.03  E-value=2.1  Score=33.63  Aligned_cols=81  Identities=11%  Similarity=0.039  Sum_probs=51.0

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCC-ceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAK-TQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      +|+.||=..+.+| |  ++..+++.|++|+.++.+...++.+.+.....+-. .++.++..|+.    +.+++..+.  +
T Consensus       132 ~~~rVLdlf~~tG-~--~sl~aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~----~~l~~~~~~--~  202 (309)
T d2igta1         132 RPLKVLNLFGYTG-V--ASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM----KFIQREERR--G  202 (309)
T ss_dssp             SCCEEEEETCTTC-H--HHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH----HHHHHHHHH--T
T ss_pred             CCCeEEEecCCCc-H--HHHHHHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH----HhHHHHhhc--C
Confidence            4677877766655 2  33345678999999999999988888776654322 34555554433    344444332  2


Q ss_pred             CCccEEEEecC
Q 025260          131 LDVGVLINNVG  141 (255)
Q Consensus       131 ~~id~lv~nag  141 (255)
                      ..+|++|.+.=
T Consensus       203 ~~fD~IilDPP  213 (309)
T d2igta1         203 STYDIILTDPP  213 (309)
T ss_dssp             CCBSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            25668988754

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=89.90  E-value=0.77  Score=35.61  Aligned_cols=79  Identities=13%  Similarity=0.108  Sum_probs=52.5

Q ss_pred             cEEEEECCCCc-hHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           54 SWALVTGPTDG-IGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        54 k~vlITGas~g-IG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      +.++-.|+++| |+.+++ +  ..+++|+.+|.+++.++-+.+..+..+-..++.....|..+.       ..+..+  .
T Consensus       112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~-------~~~~~~--~  179 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP-------FKEKFA--S  179 (271)
T ss_dssp             CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG-------GGGGTT--T
T ss_pred             cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc-------cccccC--c
Confidence            45555555555 555554 3  357899999999999998888877665455666666666542       222223  4


Q ss_pred             ccEEEEecCCCC
Q 025260          133 VGVLINNVGISY  144 (255)
Q Consensus       133 id~lv~nag~~~  144 (255)
                      +|++|.|.-+..
T Consensus       180 fDlIVsNPPYI~  191 (271)
T d1nv8a_         180 IEMILSNPPYVK  191 (271)
T ss_dssp             CCEEEECCCCBC
T ss_pred             ccEEEEcccccC
Confidence            669999987764

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=89.81  E-value=0.66  Score=34.18  Aligned_cols=71  Identities=20%  Similarity=0.217  Sum_probs=48.2

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      ++.||+|+=-|+++|+   ++..++.+|+ +|+.++.++..++.+.+.+      ..+.+...|+.+            +
T Consensus        46 dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~------~~~~~~~~D~~~------------l  104 (197)
T d1ne2a_          46 NIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC------GGVNFMVADVSE------------I  104 (197)
T ss_dssp             SSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC------TTSEEEECCGGG------------C
T ss_pred             CCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc------ccccEEEEehhh------------c
Confidence            3559999999999883   4456777886 6999999988776554432      234555666542            1


Q ss_pred             cCCCccEEEEecCC
Q 025260          129 EGLDVGVLINNVGI  142 (255)
Q Consensus       129 ~~~~id~lv~nag~  142 (255)
                      + ..+|++|.|.-.
T Consensus       105 ~-~~fD~Vi~NPPf  117 (197)
T d1ne2a_         105 S-GKYDTWIMNPPF  117 (197)
T ss_dssp             C-CCEEEEEECCCC
T ss_pred             C-CcceEEEeCccc
Confidence            2 257799988643

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=89.65  E-value=1  Score=33.47  Aligned_cols=59  Identities=14%  Similarity=0.019  Sum_probs=45.9

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG  115 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  115 (255)
                      |.+||=.|++.|.   ++..|+++|++|+.+|.++..++.+.+...+.+ ...+.++..|..+
T Consensus        17 ~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~-~~~~~~~~~d~~~   75 (234)
T d1xxla_          17 EHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKG-VENVRFQQGTAES   75 (234)
T ss_dssp             TCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHT-CCSEEEEECBTTB
T ss_pred             CCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhcccc-ccccccccccccc
Confidence            7889999999884   456778889999999999998888877776654 2347777777654

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=89.55  E-value=2.7  Score=30.45  Aligned_cols=143  Identities=12%  Similarity=0.104  Sum_probs=76.5

Q ss_pred             cCCcEEEEECCC--CchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPT--DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas--~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      ..|.++++....  ...+.+++..|.+.|..++.+.-+..                          .+ .+.........
T Consensus        23 ~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~--------------------------~~-~~~l~~~~~~~   75 (209)
T d2fr1a2          23 LDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR--------------------------CG-RDELAERLRSV   75 (209)
T ss_dssp             CCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT--------------------------CC-HHHHHHHHTTS
T ss_pred             CCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc--------------------------cC-HHHHHHHhhcc
Confidence            447777766443  34777888888888887766543321                          11 11111112222


Q ss_pred             cCCCccEEEEecCCCCCcccccccCCHHHHHhHhHHhhhHHHHHHHHHhhhhhhCCCcEEEEECCccccccCCCCCchhc
Q 025260          129 EGLDVGVLINNVGISYPYARFFHEVDQVLLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIVNIGSGAAIVIPSDPLYSVY  208 (255)
Q Consensus       129 ~~~~id~lv~nag~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~lp~~~~~~~g~iv~vsS~~~~~~~~~~~~~~Y  208 (255)
                      +  .++.+|+-.+......   ...+      .....+...+.++|.+..   .....++.+++..+...   .+.-..-
T Consensus        76 ~--~~~~vv~l~~~~~~~~---~~~~------~~~~~~~~~l~l~qal~~---~~~~~~l~~vT~~a~~~---~~~d~~~  138 (209)
T d2fr1a2          76 G--EVAGVLSLLAVDEAEP---EEAP------LALASLADTLSLVQAMVS---AELGCPLWTVTESAVAT---GPFERVR  138 (209)
T ss_dssp             C--CCSEEEECTTTTCCCC---SSCG------GGCHHHHHHHHHHHHHHH---TTCCCCEEEEEESCSCS---STTSCCS
T ss_pred             C--CCCeEEEeCCCCCCCC---cchh------HHHHHHHHHHHHHHHHHh---CCCCCcEEEEEcCCccc---CCCcccC
Confidence            2  4557887766532211   1111      112224455666676543   22345677766543222   1222334


Q ss_pred             hHHHHHHHHHHHHHHHHHccCCceEEEee
Q 025260          209 AATKAYIDQFSRSLYVEYRKSGIDVQCQV  237 (255)
Q Consensus       209 ~asK~al~~~~~~l~~e~~~~gi~v~~v~  237 (255)
                      +...+++.+|+|+++.|+....+++..+.
T Consensus       139 ~p~~A~l~Gl~r~~~~E~P~l~~~~vDl~  167 (209)
T d2fr1a2         139 NAAHGALWGVGRVIALENPAVWGGLVDVP  167 (209)
T ss_dssp             CGGGHHHHHHHHHHHHHCGGGEEEEEEEC
T ss_pred             CHhHHhHHHHHHHHHHhCCCceEEEEECC
Confidence            56789999999999999875444444443

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.51  E-value=0.22  Score=33.68  Aligned_cols=32  Identities=28%  Similarity=0.302  Sum_probs=27.2

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN   86 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~   86 (255)
                      +.++|.|| |-||.++|..|.+.|.+|.++.|+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            45666665 589999999999999999999876

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=89.41  E-value=0.13  Score=40.23  Aligned_cols=34  Identities=21%  Similarity=0.299  Sum_probs=28.7

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP   87 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~   87 (255)
                      .|.|+|.||. --|...|.+|+++|++|.+..+++
T Consensus        30 pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          30 PKHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             CCEEEEECCB-HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4678888876 458999999999999999998764

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.39  E-value=0.27  Score=35.66  Aligned_cols=33  Identities=18%  Similarity=0.371  Sum_probs=27.9

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD   88 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~   88 (255)
                      .+.|.|+ |..|.++|..|++.|.+|.+.+|..+
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            3556665 78999999999999999999999654

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=89.14  E-value=0.93  Score=32.85  Aligned_cols=74  Identities=16%  Similarity=0.224  Sum_probs=50.9

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      ++..||=.|++.|.   .+..|+++|++|+.++.++..++.+.+...+.+- ..+.....|+.+..          . ..
T Consensus        30 ~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~-~~~~~~~~d~~~~~----------~-~~   94 (198)
T d2i6ga1          30 APGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEGL-DNLQTDLVDLNTLT----------F-DG   94 (198)
T ss_dssp             CSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-TTEEEEECCTTTCC----------C-CC
T ss_pred             CCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccc-cchhhhheeccccc----------c-cc
Confidence            35679999997554   5678899999999999999988887766655432 23555666655421          1 12


Q ss_pred             CccEEEEec
Q 025260          132 DVGVLINNV  140 (255)
Q Consensus       132 ~id~lv~na  140 (255)
                      .+|+++.+.
T Consensus        95 ~fD~I~~~~  103 (198)
T d2i6ga1          95 EYDFILSTV  103 (198)
T ss_dssp             CEEEEEEES
T ss_pred             cccEEEEee
Confidence            466887655

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=89.08  E-value=0.19  Score=39.66  Aligned_cols=32  Identities=22%  Similarity=0.373  Sum_probs=23.6

Q ss_pred             cEEEEECCCCchHH-----HHHHHHHHcCCcEEEEeCC
Q 025260           54 SWALVTGPTDGIGK-----SFAFQLAKTGLNLVLVGRN   86 (255)
Q Consensus        54 k~vlITGas~gIG~-----~la~~la~~G~~V~l~~r~   86 (255)
                      |.++|++|+.| |.     +++++|.++|++|..++..
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            45666665545 65     6899999999999877644

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=88.87  E-value=1.5  Score=31.56  Aligned_cols=80  Identities=18%  Similarity=0.238  Sum_probs=51.9

Q ss_pred             cCCcEEEEECCC-CchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHh
Q 025260           51 KYGSWALVTGPT-DGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAI  128 (255)
Q Consensus        51 ~~gk~vlITGas-~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  128 (255)
                      .+|+.+|=..|. |++|.    +.+.+|+ +|+.++.+....+.+.+.+...+...++.++..|..    +..++...  
T Consensus        40 ~~~~~vLDlfaGsG~~g~----ea~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~----~~l~~~~~--  109 (182)
T d2fhpa1          40 FDGGMALDLYSGSGGLAI----EAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDAN----RALEQFYE--  109 (182)
T ss_dssp             CSSCEEEETTCTTCHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH----HHHHHHHH--
T ss_pred             cCCCEEEEcccccccccc----eeeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccch----hhhhhhcc--
Confidence            347777755554 55666    4567898 699999999988888877766554446666666643    33343333  


Q ss_pred             cCCCccEEEEec
Q 025260          129 EGLDVGVLINNV  140 (255)
Q Consensus       129 ~~~~id~lv~na  140 (255)
                      ....+|+++.+.
T Consensus       110 ~~~~fDlIflDP  121 (182)
T d2fhpa1         110 EKLQFDLVLLDP  121 (182)
T ss_dssp             TTCCEEEEEECC
T ss_pred             cCCCcceEEech
Confidence            233577887644

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.80  E-value=0.2  Score=37.04  Aligned_cols=31  Identities=16%  Similarity=0.177  Sum_probs=26.7

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCCh
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP   87 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~~   87 (255)
                      |+|.| +|--|...|.+|+++|.+|.++.++.
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            67777 56779999999999999999999875

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=88.68  E-value=0.32  Score=33.08  Aligned_cols=34  Identities=21%  Similarity=0.138  Sum_probs=29.6

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP   87 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~   87 (255)
                      .+.++|.|| |-||.++|..|++.|.+|.++.+.+
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            477888876 5899999999999999999998764

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=88.60  E-value=0.59  Score=34.83  Aligned_cols=83  Identities=13%  Similarity=0.113  Sum_probs=57.8

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      -|++|=+|...|...-..-+....|.+|+.++.+++..+.+.+.+...+-..++..+..|..    +...++.+..+...
T Consensus        57 pk~ILEiGt~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~~----e~l~~l~~~~~~~~  132 (214)
T d2cl5a1          57 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQ----DLIPQLKKKYDVDT  132 (214)
T ss_dssp             CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH----HHGGGHHHHSCCCC
T ss_pred             CCEEEEEccCchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeecccc----ccccchhhcccccc
Confidence            48899999988876543333334578999999999988888888877665566777766544    44455555554445


Q ss_pred             ccEEEEe
Q 025260          133 VGVLINN  139 (255)
Q Consensus       133 id~lv~n  139 (255)
                      +|.++..
T Consensus       133 ~D~ifiD  139 (214)
T d2cl5a1         133 LDMVFLD  139 (214)
T ss_dssp             EEEEEEC
T ss_pred             cceeeec
Confidence            7777764

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=88.42  E-value=1.9  Score=31.10  Aligned_cols=42  Identities=14%  Similarity=0.090  Sum_probs=34.4

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHH
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSD   95 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~   95 (255)
                      .-.|+|.|| +-.|.+-++-..+.|++|.+.|.+.+.+++..+
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~   70 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES   70 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHH
Confidence            357788876 468899999999999999999999988776543

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=88.29  E-value=0.51  Score=37.06  Aligned_cols=34  Identities=24%  Similarity=0.112  Sum_probs=30.7

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEe
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG   84 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~   84 (255)
                      .++||+|+|-|- |.+|..+|+.|.+.|++|+.++
T Consensus        33 ~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          33 GFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             SSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            577999999987 7999999999999999998876

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=88.28  E-value=0.19  Score=37.59  Aligned_cols=34  Identities=24%  Similarity=0.369  Sum_probs=29.7

Q ss_pred             cEEEEECCCCchHHH-----HHHHHHHcCCcEEEEeCCh
Q 025260           54 SWALVTGPTDGIGKS-----FAFQLAKTGLNLVLVGRNP   87 (255)
Q Consensus        54 k~vlITGas~gIG~~-----la~~la~~G~~V~l~~r~~   87 (255)
                      |++.|+++-||.|+.     +|..|+++|.+|.++|-+.
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            689999999999985     5778999999999998764

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=88.06  E-value=1.3  Score=30.50  Aligned_cols=37  Identities=11%  Similarity=0.047  Sum_probs=32.2

Q ss_pred             CCcEEEEECCC---CchHHHHHHHHHHcCCcEEEEeCChh
Q 025260           52 YGSWALVTGPT---DGIGKSFAFQLAKTGLNLVLVGRNPD   88 (255)
Q Consensus        52 ~gk~vlITGas---~gIG~~la~~la~~G~~V~l~~r~~~   88 (255)
                      +-|.+.|.|+|   +..|..+++.|.+.|++|+.+..+.+
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~   57 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYE   57 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCS
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCccc
Confidence            36899999999   67999999999999999999876543

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=87.87  E-value=0.3  Score=37.39  Aligned_cols=34  Identities=24%  Similarity=0.373  Sum_probs=30.5

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEe
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVG   84 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~   84 (255)
                      +++||+|+|-| .|.+|..+|+.|.+.|++|+.++
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            46799999997 78999999999999999998765

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=87.73  E-value=0.49  Score=31.45  Aligned_cols=38  Identities=21%  Similarity=0.444  Sum_probs=32.1

Q ss_pred             cCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhh
Q 025260           51 KYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK   89 (255)
Q Consensus        51 ~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~   89 (255)
                      ..+.++.|.| +|=+|+-++.+..+.|+++++.+.+++.
T Consensus         9 ~~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~   46 (111)
T d1kjqa2           9 PAATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADA   46 (111)
T ss_dssp             TTCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTC
T ss_pred             CCCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCC
Confidence            3457799999 4579999999999999999999988653

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=87.69  E-value=0.32  Score=34.30  Aligned_cols=35  Identities=20%  Similarity=0.172  Sum_probs=29.2

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC--cEEEEeCCh
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL--NLVLVGRNP   87 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~--~V~l~~r~~   87 (255)
                      .||.++|.||+ -.|.++|.+|.+.|.  +|+++++++
T Consensus         1 ~gkrivIvGgG-~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGG-TGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECcc-HHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            38999999986 569999999999885  788888765

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.49  E-value=3.4  Score=28.94  Aligned_cols=74  Identities=15%  Similarity=0.051  Sum_probs=40.5

Q ss_pred             EEEECCCCchHHHHHHH-HHHc-----CCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhc
Q 025260           56 ALVTGPTDGIGKSFAFQ-LAKT-----GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIE  129 (255)
Q Consensus        56 vlITGas~gIG~~la~~-la~~-----G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  129 (255)
                      +.|.||++ +|...+.. +++.     +.++++.|.++++++...+......... .   ....+.+       -.+.+.
T Consensus         3 IaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~-~---~~~~t~~-------~~~~l~   70 (162)
T d1up7a1           3 IAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDR-F---KVLISDT-------FEGAVV   70 (162)
T ss_dssp             EEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTS-S---EEEECSS-------HHHHHT
T ss_pred             EEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccC-c---eEEEecC-------cccccC
Confidence            66777754 56555533 2221     3579999999998775443333222111 1   1122322       234445


Q ss_pred             CCCccEEEEecCCC
Q 025260          130 GLDVGVLINNVGIS  143 (255)
Q Consensus       130 ~~~id~lv~nag~~  143 (255)
                      +  -|++|..||..
T Consensus        71 ~--aDvVVita~~~   82 (162)
T d1up7a1          71 D--AKYVIFQFRPG   82 (162)
T ss_dssp             T--CSEEEECCCTT
T ss_pred             C--CCEEEEecccC
Confidence            4  45999999874

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=87.16  E-value=1.2  Score=31.23  Aligned_cols=42  Identities=24%  Similarity=0.310  Sum_probs=30.8

Q ss_pred             cEEEEECCCCchHHHHHHHHHHc--CCcEEEEe--CChhhHHHHHH
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKT--GLNLVLVG--RNPDKLKDVSD   95 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~--G~~V~l~~--r~~~~~~~~~~   95 (255)
                      |.+.|-|+||-||.....-+.+.  .++|+..+  +|-+.+.+...
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~   48 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAK   48 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHH
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHH
Confidence            78999999999999998888764  47776655  44444444433

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.13  E-value=1  Score=34.96  Aligned_cols=45  Identities=16%  Similarity=0.128  Sum_probs=37.3

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhh
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAK  100 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~  100 (255)
                      ++.||=.|++.|.   ++..|+++|++|+.+|.+++.++.+.+...+.
T Consensus        57 ~~~vLD~GcG~G~---~~~~la~~g~~v~gvD~S~~ml~~A~~~~~~~  101 (292)
T d1xvaa_          57 CHRVLDVACGTGV---DSIMLVEEGFSVTSVDASDKMLKYALKERWNR  101 (292)
T ss_dssp             CCEEEESSCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred             CCEEEEecCCCcH---HHHHHHHcCCeeeeccCchHHHHHHHHHHHhc
Confidence            6789999999876   46677889999999999999988877766544

>d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing protein METT10D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Methyltransferase 10 domain
domain: Methyltransferase 10 domain containing protein METT10D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.73  E-value=0.75  Score=35.12  Aligned_cols=84  Identities=14%  Similarity=0.063  Sum_probs=58.6

Q ss_pred             cEEEEECCC-CchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           54 SWALVTGPT-DGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        54 k~vlITGas-~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      ..++=.|.+ |.|+..++.++  .+++++.++.+++.++-+.+.++..+-..++.....+..+.+..   .+.+ .....
T Consensus        63 ~~~LDiGtGsg~I~~~l~~~~--~~~~~~~~Di~~~al~~A~~N~~~n~l~~~~~~~~~~~~~~~~~---~~~~-~~~~~  136 (250)
T d2h00a1          63 RRGIDIGTGASCIYPLLGATL--NGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMD---ALKE-ESEII  136 (250)
T ss_dssp             CEEEEESCTTTTHHHHHHHHH--HCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTT---TSTT-CCSCC
T ss_pred             ceEEEeCCCchHHHHHHHHhC--CCccccceecCHHHHHHHHHHHHHhCCCcceeeeeeccHHhhhh---hhhh-cccCc
Confidence            466666754 66999999887  47899999999999998888887765566677777665443211   1111 12335


Q ss_pred             ccEEEEecCCC
Q 025260          133 VGVLINNVGIS  143 (255)
Q Consensus       133 id~lv~nag~~  143 (255)
                      +|++|.|.=..
T Consensus       137 fD~ivsNPPY~  147 (250)
T d2h00a1         137 YDFCMCNPPFF  147 (250)
T ss_dssp             BSEEEECCCCC
T ss_pred             eeEEEecCccc
Confidence            78999998765

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=86.62  E-value=0.33  Score=37.81  Aligned_cols=31  Identities=23%  Similarity=0.517  Sum_probs=26.0

Q ss_pred             EEEECCCCchHHHHHHHHHHcCC-cEEEEeCCh
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNP   87 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~-~V~l~~r~~   87 (255)
                      |+|.|| |-+|.++|.+|+++|. +|.+++|+.
T Consensus         4 ViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           4 IVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            666665 4899999999999997 699998874

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=86.45  E-value=0.49  Score=35.22  Aligned_cols=62  Identities=11%  Similarity=0.129  Sum_probs=46.6

Q ss_pred             CcEEEEECCCCc-hHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECC
Q 025260           53 GSWALVTGPTDG-IGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS  114 (255)
Q Consensus        53 gk~vlITGas~g-IG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  114 (255)
                      +.+||=.|++.| +...+++++...|++|+.+|.+++.++.+.+.+.+......+.....|..
T Consensus        40 ~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~  102 (225)
T d1im8a_          40 DSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIR  102 (225)
T ss_dssp             TCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTT
T ss_pred             CCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhh
Confidence            677999998865 45666666666799999999999999999888876655555655555544

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=86.00  E-value=1.7  Score=31.37  Aligned_cols=76  Identities=17%  Similarity=0.137  Sum_probs=54.1

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcC-CceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYA-KTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      ++++|+=.|+++|   .++..+++.+.+|..++.++...+.+.+.+...+- +.++.....|..+..           ..
T Consensus        52 ~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~-----------~~  117 (194)
T d1dusa_          52 KDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV-----------KD  117 (194)
T ss_dssp             TTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC-----------TT
T ss_pred             CCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhh-----------cc
Confidence            3788999998877   44566778888999999999888888777665432 345777777765431           12


Q ss_pred             CCccEEEEecC
Q 025260          131 LDVGVLINNVG  141 (255)
Q Consensus       131 ~~id~lv~nag  141 (255)
                      ..+|+++.|.-
T Consensus       118 ~~fD~Ii~~~p  128 (194)
T d1dusa_         118 RKYNKIITNPP  128 (194)
T ss_dssp             SCEEEEEECCC
T ss_pred             CCceEEEEccc
Confidence            25779988753

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=85.98  E-value=0.35  Score=37.10  Aligned_cols=31  Identities=32%  Similarity=0.548  Sum_probs=25.9

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCCh
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP   87 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~~   87 (255)
                      |+|.|| |-.|.++|.+|+++|.+|+++++..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            566654 5789999999999999999998753

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=85.97  E-value=0.49  Score=30.51  Aligned_cols=36  Identities=17%  Similarity=0.064  Sum_probs=27.3

Q ss_pred             CcEEEEECCCCchH-HHHHHHHHHcCCcEEEEeCChhh
Q 025260           53 GSWALVTGPTDGIG-KSFAFQLAKTGLNLVLVGRNPDK   89 (255)
Q Consensus        53 gk~vlITGas~gIG-~~la~~la~~G~~V~l~~r~~~~   89 (255)
                      .|.+.+.|-. |+| .++|+.|.++|++|...|+....
T Consensus         8 ~~~ihfiGig-G~GMs~LA~~L~~~G~~VsGSD~~~~~   44 (96)
T d1p3da1           8 VQQIHFIGIG-GAGMSGIAEILLNEGYQISGSDIADGV   44 (96)
T ss_dssp             CCEEEEETTT-STTHHHHHHHHHHHTCEEEEEESCCSH
T ss_pred             CCEEEEEEEC-HHHHHHHHHHHHhCCCEEEEEeCCCCh
Confidence            4566666654 455 56799999999999999987654

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=85.86  E-value=1.2  Score=33.91  Aligned_cols=76  Identities=21%  Similarity=0.272  Sum_probs=55.3

Q ss_pred             CCcEEEEECCCCc-hHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDG-IGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~g-IG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .|.+||=.|+++| +...+|+.+.. +.+|+.++++++.++.+.+.+++.+....+.....|+.+.           +.+
T Consensus        85 pG~rVLEiG~GsG~lt~~la~~v~~-~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~-----------~~~  152 (250)
T d1yb2a1          85 PGMDILEVGVGSGNMSSYILYALNG-KGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF-----------ISD  152 (250)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHTT-SSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC-----------CCS
T ss_pred             CcCEEEEeeeeCcHHHHHHHHHhCC-CcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeecc-----------ccc
Confidence            3789999998876 45556655543 3599999999999999998887765556677777777642           223


Q ss_pred             CCccEEEEe
Q 025260          131 LDVGVLINN  139 (255)
Q Consensus       131 ~~id~lv~n  139 (255)
                      ..+|.++.+
T Consensus       153 ~~fD~V~ld  161 (250)
T d1yb2a1         153 QMYDAVIAD  161 (250)
T ss_dssp             CCEEEEEEC
T ss_pred             ceeeeeeec
Confidence            357788865

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=85.86  E-value=0.33  Score=31.90  Aligned_cols=38  Identities=13%  Similarity=0.065  Sum_probs=30.7

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD   88 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~   88 (255)
                      .++||.|+|.|++ -=|..+|.+|++.+.+++...|...
T Consensus        29 ~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          29 LFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             hcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecCc
Confidence            4679999999987 5578899999999888877776543

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=85.86  E-value=1.5  Score=32.79  Aligned_cols=75  Identities=19%  Similarity=0.051  Sum_probs=49.6

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      .|.+||-.|+++|.-.+   .|++.+.+|+.++++++..+.+.+.+.+   ...+.+...|..+..        .  ...
T Consensus        70 ~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~~---~~nv~~~~~d~~~g~--------~--~~~  133 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLSY---YNNIKLILGDGTLGY--------E--EEK  133 (224)
T ss_dssp             TTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHTT---CSSEEEEESCGGGCC--------G--GGC
T ss_pred             ccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHhc---ccccccccCchhhcc--------h--hhh
Confidence            37889999999986554   4566678999999998887766654432   234666666654310        1  112


Q ss_pred             CccEEEEecCC
Q 025260          132 DVGVLINNVGI  142 (255)
Q Consensus       132 ~id~lv~nag~  142 (255)
                      ++|.++.+++.
T Consensus       134 pfD~Iiv~~a~  144 (224)
T d1vbfa_         134 PYDRVVVWATA  144 (224)
T ss_dssp             CEEEEEESSBB
T ss_pred             hHHHHHhhcch
Confidence            46788887764

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=85.85  E-value=0.64  Score=29.50  Aligned_cols=68  Identities=13%  Similarity=0.082  Sum_probs=42.2

Q ss_pred             EEEECCCCchHH-HHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCcc
Q 025260           56 ALVTGPTDGIGK-SFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVG  134 (255)
Q Consensus        56 vlITGas~gIG~-~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id  134 (255)
                      +-+. |-+|+|. ++|+.|.++|+.|.-.|+.+....   +++++.+  ..+.  .....+.           +.  +.|
T Consensus         4 ihfi-GIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t---~~L~~~G--i~i~--~gh~~~~-----------i~--~~d   62 (89)
T d1j6ua1           4 IHFV-GIGGIGMSAVALHEFSNGNDVYGSNIEETERT---AYLRKLG--IPIF--VPHSADN-----------WY--DPD   62 (89)
T ss_dssp             EEEE-TTTSHHHHHHHHHHHHTTCEEEEECSSCCHHH---HHHHHTT--CCEE--SSCCTTS-----------CC--CCS
T ss_pred             EEEE-eECHHHHHHHHHHHHhCCCeEEEEeCCCChhH---HHHHHCC--CeEE--eeecccc-----------cC--CCC
Confidence            3344 4567777 789999999999999998865433   3455543  3332  1111111           12  466


Q ss_pred             EEEEecCCCC
Q 025260          135 VLINNVGISY  144 (255)
Q Consensus       135 ~lv~nag~~~  144 (255)
                      .+|...++..
T Consensus        63 ~vV~SsAI~~   72 (89)
T d1j6ua1          63 LVIKTPAVRD   72 (89)
T ss_dssp             EEEECTTCCT
T ss_pred             EEEEecCcCC
Confidence            9999888753

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=85.63  E-value=1  Score=34.07  Aligned_cols=80  Identities=14%  Similarity=0.093  Sum_probs=57.0

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      +|++||=.|++.|   ..+..+++.|. +|+.+|.+++.++.+.+...+......+.+...|..+..-         ...
T Consensus        24 ~~~~VLDlGCG~G---~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~---------~~~   91 (252)
T d1ri5a_          24 RGDSVLDLGCGKG---GDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM---------DLG   91 (252)
T ss_dssp             TTCEEEEETCTTT---TTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC---------CCS
T ss_pred             CcCEEEEecccCc---HHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcc---------ccc
Confidence            4789999999877   24566777776 7999999999999988877766555578888888754200         012


Q ss_pred             CCccEEEEecCCC
Q 025260          131 LDVGVLINNVGIS  143 (255)
Q Consensus       131 ~~id~lv~nag~~  143 (255)
                      ..+|+++.+-+..
T Consensus        92 ~~fD~V~~~~~l~  104 (252)
T d1ri5a_          92 KEFDVISSQFSFH  104 (252)
T ss_dssp             SCEEEEEEESCGG
T ss_pred             ccceEEEEcceee
Confidence            2477888776553

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=85.38  E-value=0.37  Score=32.01  Aligned_cols=33  Identities=21%  Similarity=0.292  Sum_probs=28.0

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP   87 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~   87 (255)
                      |.++|.| +|-+|.++|..|++.|.+|.++.|.+
T Consensus        22 ~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          22 QHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHhhcccceEEEeeec
Confidence            5666665 46899999999999999999998864

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=85.30  E-value=0.51  Score=35.52  Aligned_cols=34  Identities=24%  Similarity=0.331  Sum_probs=27.8

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP   87 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~   87 (255)
                      .+.|+|.||+ --|..+|..|+++|.+|++..|+.
T Consensus         4 ~~kV~IiGaG-~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVGGS-ISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4667888775 567888889999999999999864

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=85.22  E-value=1.5  Score=32.78  Aligned_cols=82  Identities=12%  Similarity=0.113  Sum_probs=55.3

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHH-cC----CcEEEEeCChhhHHHHHHHHHhh----cCCceEEEEEEECCCCcHHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAK-TG----LNLVLVGRNPDKLKDVSDSIQAK----YAKTQIKSVVVDFSGDLDEGVE  122 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~-~G----~~V~l~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~  122 (255)
                      +|..||..|+.+|--.++.-+++. .|    .+|+.++++++-.+.+.+.+.+.    .....+.+...|..+.      
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~------  153 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG------  153 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccc------
Confidence            478999999999998888888764 34    48999999988777666554322    1123466666665431      


Q ss_pred             HHHHHhcCCCccEEEEecCCC
Q 025260          123 RIKEAIEGLDVGVLINNVGIS  143 (255)
Q Consensus       123 ~~~~~~~~~~id~lv~nag~~  143 (255)
                          ..+..++|.++.+++..
T Consensus       154 ----~~~~~~fD~Iiv~~a~~  170 (223)
T d1r18a_         154 ----YPPNAPYNAIHVGAAAP  170 (223)
T ss_dssp             ----CGGGCSEEEEEECSCBS
T ss_pred             ----cccccceeeEEEEeech
Confidence                11222577888888753

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=84.67  E-value=1.9  Score=32.25  Aligned_cols=59  Identities=12%  Similarity=0.102  Sum_probs=44.9

Q ss_pred             CcEEEEECCCCchHHHHHHHHHH-cCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAK-TGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFS  114 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~-~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  114 (255)
                      |+.||=.|++.|   .++..+++ .|++|+.++-++..++.+.+...+.+.+.++.+...|..
T Consensus        34 g~~VLDiGCG~G---~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~   93 (245)
T d1nkva_          34 GTRILDLGSGSG---EMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAA   93 (245)
T ss_dssp             TCEEEEETCTTC---HHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCT
T ss_pred             CCEEEEEcCCCC---HHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHh
Confidence            788999998877   34556665 489999999999988887777666655556777776665

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=84.63  E-value=2  Score=29.35  Aligned_cols=31  Identities=19%  Similarity=0.247  Sum_probs=23.9

Q ss_pred             EEEEECCCCchHHHHHHHHHH-cCCcEEE-EeC
Q 025260           55 WALVTGPTDGIGKSFAFQLAK-TGLNLVL-VGR   85 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~-~G~~V~l-~~r   85 (255)
                      ++.|.|++|-+|+++++...+ .+++++. .++
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~   33 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDA   33 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECT
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence            478999999999999998776 4566554 344

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=84.62  E-value=0.53  Score=34.34  Aligned_cols=36  Identities=22%  Similarity=0.349  Sum_probs=29.1

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHH
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDV   93 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~   93 (255)
                      +.|.| .|.+|..+|..|+ +|++|+..|-+++..++.
T Consensus         3 I~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~l   38 (196)
T d1dlja2           3 IAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVDKI   38 (196)
T ss_dssp             EEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHHHH
T ss_pred             EEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHHHH
Confidence            45555 7899999998775 699999999998876544

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=83.88  E-value=2.2  Score=28.28  Aligned_cols=79  Identities=19%  Similarity=0.182  Sum_probs=53.7

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC-CcHHHHHHHHHHhcCCC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG-DLDEGVERIKEAIEGLD  132 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~~  132 (255)
                      .++||.=-...+...+...|.+.|++|.....-.+.+    +.+++.  ...+...+..+.+ +--+.++++++..+..+
T Consensus         4 ~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~a~----~~l~~~--~~dlii~D~~mp~~~G~el~~~l~~~~~~~p   77 (123)
T d1krwa_           4 GIVWVVDDDSSIRWVLERALAGAGLTCTTFENGNEVL----AALASK--TPDVLLSDIRMPGMDGLALLKQIKQRHPMLP   77 (123)
T ss_dssp             CEEEEESSSHHHHHHHHHHHHHTTCEEEEESSSHHHH----HHHTTC--CCSEEEECCSSSSSTTHHHHHHHHHHSSSCC
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCHHHHH----HHHHhC--CCCEEEehhhcCCchHHHHHHHHHHhCCCCe
Confidence            4688999899999999999999999998765544333    333322  4456666666665 34677888888766655


Q ss_pred             ccEEEEec
Q 025260          133 VGVLINNV  140 (255)
Q Consensus       133 id~lv~na  140 (255)
                        +++..+
T Consensus        78 --iI~~t~   83 (123)
T d1krwa_          78 --VIIMTA   83 (123)
T ss_dssp             --EEESCC
T ss_pred             --EEEEec
Confidence              555433

>d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Cell division response regulator DivK
species: Caulobacter crescentus [TaxId: 155892]

Probab=83.78  E-value=3.7  Score=26.98  Aligned_cols=81  Identities=12%  Similarity=0.023  Sum_probs=51.7

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC-CcHHHHHHHHHHhcCCC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG-DLDEGVERIKEAIEGLD  132 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~~  132 (255)
                      |.|||.=-+.-+-..+...|.+.|++|.... +..+   +.+.+++.  ...+..++..+.+ +--+.++++++.-...+
T Consensus         2 krILiVDD~~~~~~~l~~~L~~~g~~v~~a~-~~~~---al~~~~~~--~~dlil~D~~mp~~dG~el~~~ir~~~~~~~   75 (123)
T d1mb3a_           2 KKVLIVEDNELNMKLFHDLLEAQGYETLQTR-EGLS---ALSIAREN--KPDLILMDIQLPEISGLEVTKWLKEDDDLAH   75 (123)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEES-CHHH---HHHHHHHH--CCSEEEEESBCSSSBHHHHHHHHHHSTTTTT
T ss_pred             ceEEEEECCHHHHHHHHHHHHHCCCEEEEEC-CHHH---HHHHHHhC--CCCEEEEEeccCCCcHHHHHHHHHhCCCcCC
Confidence            6788888888888899999999999988543 4333   23333333  3457777777776 33567777876543223


Q ss_pred             ccEEEEec
Q 025260          133 VGVLINNV  140 (255)
Q Consensus       133 id~lv~na  140 (255)
                      +-+++..+
T Consensus        76 iPii~lt~   83 (123)
T d1mb3a_          76 IPVVAVTA   83 (123)
T ss_dssp             SCEEEEC-
T ss_pred             CCeEEEEE
Confidence            32555543

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=83.61  E-value=0.66  Score=31.61  Aligned_cols=32  Identities=22%  Similarity=0.267  Sum_probs=26.8

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEE-eCC
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLV-GRN   86 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~-~r~   86 (255)
                      .+.|.|++|-+|+++++.+.++|++++.. +++
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~   34 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVN   34 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCC
Confidence            48899999999999999999999987654 443

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=83.53  E-value=0.43  Score=36.27  Aligned_cols=31  Identities=26%  Similarity=0.317  Sum_probs=26.5

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCCh
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP   87 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~~   87 (255)
                      |+|.|| |--|...|.+|+++|++|.+..++.
T Consensus         3 V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           3 VAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             EEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            778887 5678999999999999999998753

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=83.38  E-value=3.1  Score=32.38  Aligned_cols=84  Identities=13%  Similarity=0.147  Sum_probs=49.7

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcC--CcEEEEeCChhhHHHHHHHHHhhc---------------------CCceEEEE
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTG--LNLVLVGRNPDKLKDVSDSIQAKY---------------------AKTQIKSV  109 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G--~~V~l~~r~~~~~~~~~~~~~~~~---------------------~~~~~~~~  109 (255)
                      -|.|||.|+++|   .+++++++..  .+|.++..++.-.+-..+.+....                     ...+.-.+
T Consensus        90 pk~VLiiGgG~G---~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yDvI  166 (295)
T d1inla_          90 PKKVLIIGGGDG---GTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVI  166 (295)
T ss_dssp             CCEEEEEECTTC---HHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEE
T ss_pred             CceEEEecCCch---HHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEhhhHHHHHhcCCCCCCEE
Confidence            578999998877   5677777753  579999999876554444322110                     12345566


Q ss_pred             EEECCCC---------cHHHHHHHHHHhcCCCccEEEEecC
Q 025260          110 VVDFSGD---------LDEGVERIKEAIEGLDVGVLINNVG  141 (255)
Q Consensus       110 ~~d~~~~---------~~~~~~~~~~~~~~~~id~lv~nag  141 (255)
                      .+|..|+         -.++.+.+++.+....  +++.+++
T Consensus       167 i~D~~dp~~~~~~~L~t~efy~~~~~~L~~~G--i~v~q~~  205 (295)
T d1inla_         167 IIDSTDPTAGQGGHLFTEEFYQACYDALKEDG--VFSAETE  205 (295)
T ss_dssp             EEEC----------CCSHHHHHHHHHHEEEEE--EEEEECC
T ss_pred             EEcCCCCCcCchhhhccHHHHHHHHhhcCCCc--EEEEecC
Confidence            6666542         1456666776665444  5555554

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.32  E-value=2.1  Score=31.74  Aligned_cols=84  Identities=15%  Similarity=0.042  Sum_probs=56.4

Q ss_pred             CcEEEEECCCCchHHHH-HHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCC
Q 025260           53 GSWALVTGPTDGIGKSF-AFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGL  131 (255)
Q Consensus        53 gk~vlITGas~gIG~~l-a~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  131 (255)
                      -|.||=.|...|..... |+.+ ..+.+|+.++.+++..+.+.+.+.+.+-..++.....|..    +..+++.......
T Consensus        60 ~k~vLEiGt~~GyStl~~a~al-~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gda~----e~l~~~~~~~~~~  134 (219)
T d2avda1          60 AKKALDLGTFTGYSALALALAL-PADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPAL----ETLDELLAAGEAG  134 (219)
T ss_dssp             CCEEEEECCTTSHHHHHHHTTS-CTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHH----HHHHHHHHTTCTT
T ss_pred             CCeEEEEechhhHHHHHHHHhC-CCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEeehh----hcchhhhhhcccC
Confidence            57899999887766433 3333 3466999999999988888888877665666666655533    3444444443444


Q ss_pred             CccEEEEecC
Q 025260          132 DVGVLINNVG  141 (255)
Q Consensus       132 ~id~lv~nag  141 (255)
                      ++|.++..+.
T Consensus       135 ~fD~ifiD~d  144 (219)
T d2avda1         135 TFDVAVVDAD  144 (219)
T ss_dssp             CEEEEEECSC
T ss_pred             CccEEEEeCC
Confidence            6888887663

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=83.27  E-value=0.23  Score=34.73  Aligned_cols=38  Identities=13%  Similarity=0.106  Sum_probs=27.4

Q ss_pred             CCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHH
Q 025260           61 PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQ   98 (255)
Q Consensus        61 as~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~   98 (255)
                      |+|-+|+++++.|.+.+..+.+.+|+.++.++..++..
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~   43 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYG   43 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTC
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhccc
Confidence            56789999999886644445689999999888877643

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=83.20  E-value=0.67  Score=30.76  Aligned_cols=34  Identities=21%  Similarity=0.081  Sum_probs=26.6

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHc---CCcEEEEeCCh
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKT---GLNLVLVGRNP   87 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~---G~~V~l~~r~~   87 (255)
                      .+.++|.|| |.+|.++|..|.+.   |.+|.++.|.+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            477888887 89999999776654   45799988764

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.96  E-value=0.49  Score=35.01  Aligned_cols=31  Identities=23%  Similarity=0.303  Sum_probs=26.4

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCCh
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP   87 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~~   87 (255)
                      |+|.||.. -|...|.++++.|.+|+++++.+
T Consensus         8 viVIG~Gp-AGl~aA~~aa~~G~kV~lie~~~   38 (233)
T d1v59a1           8 VVIIGGGP-AGYVAAIKAAQLGFNTACVEKRG   38 (233)
T ss_dssp             EEEECCSH-HHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECCCH-HHHHHHHHHHHCCCcEEEEEecC
Confidence            67888754 49999999999999999998754

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=82.69  E-value=0.44  Score=36.51  Aligned_cols=34  Identities=32%  Similarity=0.558  Sum_probs=28.1

Q ss_pred             cEEEEECCCCchHHH-----HHHHHHHcCCcEEEEeCChh
Q 025260           54 SWALVTGPTDGIGKS-----FAFQLAKTGLNLVLVGRNPD   88 (255)
Q Consensus        54 k~vlITGas~gIG~~-----la~~la~~G~~V~l~~r~~~   88 (255)
                      |++.|+| -||.|+.     +|..|+++|.+|.++|-+..
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            4677898 9999986     46689999999999998753

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=82.58  E-value=1.3  Score=34.35  Aligned_cols=76  Identities=18%  Similarity=0.227  Sum_probs=52.2

Q ss_pred             cEEEEEC-CCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCC
Q 025260           54 SWALVTG-PTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLD  132 (255)
Q Consensus        54 k~vlITG-as~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  132 (255)
                      ..++=.| |||-||.+++.++  ..++|+.+|.++..++-+.+..+..+- .++.++..|..+.           +....
T Consensus       110 ~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~-~~v~~~~~d~~~~-----------~~~~~  175 (274)
T d2b3ta1         110 CRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSA-----------LAGQQ  175 (274)
T ss_dssp             CEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTC-CSEEEECCSTTGG-----------GTTCC
T ss_pred             cceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCc-ccceeeecccccc-----------cCCCc
Confidence            3455555 4566777777654  457999999999999888877766542 3477777776543           12236


Q ss_pred             ccEEEEecCCC
Q 025260          133 VGVLINNVGIS  143 (255)
Q Consensus       133 id~lv~nag~~  143 (255)
                      +|++|.|.-..
T Consensus       176 fDlIvsNPPYi  186 (274)
T d2b3ta1         176 FAMIVSNPPYI  186 (274)
T ss_dssp             EEEEEECCCCB
T ss_pred             eeEEEecchhh
Confidence            88999997654

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=82.52  E-value=1.8  Score=33.47  Aligned_cols=58  Identities=9%  Similarity=0.032  Sum_probs=43.9

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHc-CCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEE
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKT-GLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVD  112 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~-G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d  112 (255)
                      .|.+||=.|++.|   .++..++++ |++|+.++.+++..+.+.+.+++.+-...+.....|
T Consensus        52 ~g~~VLDiGCG~G---~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d  110 (280)
T d2fk8a1          52 PGMTLLDIGCGWG---TTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQG  110 (280)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC
T ss_pred             CCCEEEEecCCch---HHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhhh
Confidence            3899999999977   356667755 999999999999988888888776544555554444

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.35  E-value=0.58  Score=35.98  Aligned_cols=32  Identities=22%  Similarity=0.336  Sum_probs=28.0

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCChh
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD   88 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~~~   88 (255)
                      |+|.||+ =-|..+|..|+++|.+|.++.+.++
T Consensus         5 V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           5 VAIIGAG-PSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             EEEECCS-HHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            6777776 7899999999999999999998754

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.32  E-value=3.5  Score=30.10  Aligned_cols=76  Identities=16%  Similarity=-0.029  Sum_probs=50.6

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcC-CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcC
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEG  130 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G-~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  130 (255)
                      .++.||=.||+.|.   ++.+|++++ .+|..++-++..++.+.+...+.+ ...+.+...|..+-          .+..
T Consensus        60 ~~~~vLDiGcG~G~---~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~-~~~~~f~~~d~~~~----------~~~~  125 (222)
T d2ex4a1          60 GTSCALDCGAGIGR---ITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQDF----------TPEP  125 (222)
T ss_dssp             CCSEEEEETCTTTH---HHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGGC----------CCCS
T ss_pred             CCCEEEEeccCCCH---hhHHHHHhcCCEEEEeecCHHHhhcccccccccc-cccccccccccccc----------cccc
Confidence            36789999998775   455555444 479999999998888877765543 33556777776542          1223


Q ss_pred             CCccEEEEecC
Q 025260          131 LDVGVLINNVG  141 (255)
Q Consensus       131 ~~id~lv~nag  141 (255)
                      ..+|+++.+..
T Consensus       126 ~~fD~I~~~~~  136 (222)
T d2ex4a1         126 DSYDVIWIQWV  136 (222)
T ss_dssp             SCEEEEEEESC
T ss_pred             ccccccccccc
Confidence            35778876553

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=82.20  E-value=0.36  Score=34.87  Aligned_cols=33  Identities=27%  Similarity=0.247  Sum_probs=27.5

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCC
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN   86 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~   86 (255)
                      ++-|+|.||.. .|.+.|..+++.|.+|+++.+.
T Consensus         5 ~~dVvIIGGGp-aGl~AA~~~ar~g~~v~iie~~   37 (190)
T d1trba1           5 HSKLLILGSGP-AGYTAAVYAARANLQPVLITGM   37 (190)
T ss_dssp             EEEEEEECCSH-HHHHHHHHHHTTTCCCEEECCS
T ss_pred             CCcEEEECCCH-HHHHHHHHHHHcCCceEEEEee
Confidence            56678887764 8899999999999999999764

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=82.12  E-value=9.2  Score=29.42  Aligned_cols=85  Identities=15%  Similarity=0.093  Sum_probs=53.7

Q ss_pred             CcEEEEECCCCchHHHHHHHHHHc-C-CcEEEEeCChhhHHHHHHHHH----------------------hhcCCceEEE
Q 025260           53 GSWALVTGPTDGIGKSFAFQLAKT-G-LNLVLVGRNPDKLKDVSDSIQ----------------------AKYAKTQIKS  108 (255)
Q Consensus        53 gk~vlITGas~gIG~~la~~la~~-G-~~V~l~~r~~~~~~~~~~~~~----------------------~~~~~~~~~~  108 (255)
                      -|.|||.|+++|.   +++++++. + .+|.++.-+++-.+-..+-+.                      +.....+.-.
T Consensus        81 pk~VLiiGgG~G~---~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~~Da~~~l~~~~~~~yDv  157 (290)
T d1xj5a_          81 PKKVLVIGGGDGG---VLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA  157 (290)
T ss_dssp             CCEEEEETCSSSH---HHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred             CcceEEecCCchH---HHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEEccHHHHHhhccccCccE
Confidence            4779999988763   55676765 3 479999988776554443221                      1112335666


Q ss_pred             EEEECCCC--------cHHHHHHHHHHhcCCCccEEEEecCC
Q 025260          109 VVVDFSGD--------LDEGVERIKEAIEGLDVGVLINNVGI  142 (255)
Q Consensus       109 ~~~d~~~~--------~~~~~~~~~~~~~~~~id~lv~nag~  142 (255)
                      +-+|.+++        -.++++.+++.+....  +++.|++.
T Consensus       158 Ii~D~~dp~~~~~~L~t~eF~~~~~~~L~~~G--i~v~q~~s  197 (290)
T d1xj5a_         158 VIVDSSDPIGPAKELFEKPFFQSVARALRPGG--VVCTQAES  197 (290)
T ss_dssp             EEECCCCTTSGGGGGGSHHHHHHHHHHEEEEE--EEEEECCC
T ss_pred             EEEcCCCCCCcchhhCCHHHHHHHHHhcCCCc--EEEEecCC
Confidence            77777763        2567777877776555  66666653

>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}

class: Alpha and beta proteins (a/b)
fold: PEP carboxykinase-like
superfamily: PEP carboxykinase-like
family: HPr kinase HprK C-terminal domain
domain: HPr kinase HprK C-terminal domain
species: Staphylococcus xylosus [TaxId: 1288]

Probab=82.03  E-value=0.5  Score=33.97  Aligned_cols=32  Identities=50%  Similarity=0.713  Sum_probs=25.8

Q ss_pred             ccCCcEEEEECCCCchHHH-HHHHHHHcCCcEEE
Q 025260           50 RKYGSWALVTGPTDGIGKS-FAFQLAKTGLNLVL   82 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~-la~~la~~G~~V~l   82 (255)
                      ...|+-|+|+|-| |.|+. +|.+|.++|++++.
T Consensus        12 ~~~g~gvli~G~s-g~GKS~la~~l~~~g~~li~   44 (169)
T d1ko7a2          12 DVYGVGVLITGDS-GIGKSETALELIKRGHRLVA   44 (169)
T ss_dssp             EETTEEEEEEEST-TSSHHHHHHHHHHTTCEEEE
T ss_pred             EECCEEEEEEeCC-CCCHHHHHHHHHHcCCeEEe
Confidence            4568999999876 78885 99999999987543

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=81.96  E-value=1.3  Score=31.93  Aligned_cols=65  Identities=15%  Similarity=0.219  Sum_probs=43.4

Q ss_pred             HHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCCCcHHHHHHHHHHhcCCCccEEEEecCCCC
Q 025260           70 AFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSGDLDEGVERIKEAIEGLDVGVLINNVGISY  144 (255)
Q Consensus        70 a~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~id~lv~nag~~~  144 (255)
                      .+++++++.+|+..||+++.++.+.+    .. ...+..+..+.++     +++.....+...+|.++..-|+..
T Consensus        33 s~~iL~~~~~viaiD~D~~ai~~a~~----~~-~~~~~~~~~~f~~-----~~~~l~~~~~~~vdgIl~DLGvSs   97 (182)
T d1wg8a2          33 ARGILERGGRVIGLDQDPEAVARAKG----LH-LPGLTVVQGNFRH-----LKRHLAALGVERVDGILADLGVSS   97 (182)
T ss_dssp             HHHHHHTTCEEEEEESCHHHHHHHHH----TC-CTTEEEEESCGGG-----HHHHHHHTTCSCEEEEEEECSCCH
T ss_pred             HHHHhcccCcEEEEhhhhhHHHHHhh----cc-ccceeEeehHHHH-----HHHHHHHcCCCccCEEEEEccCCH
Confidence            45556678899999999987665433    12 3456666666553     244444455446889999999864

>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=81.96  E-value=0.56  Score=35.72  Aligned_cols=31  Identities=26%  Similarity=0.377  Sum_probs=26.6

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCCh
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP   87 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~~   87 (255)
                      ++|.||..+ |...|.++++.|.+|.++.++.
T Consensus         4 viVIG~G~a-G~~aA~~aa~~G~~V~liE~~~   34 (259)
T d1onfa1           4 LIVIGGGSG-GMAAARRAARHNAKVALVEKSR   34 (259)
T ss_dssp             EEEECCSHH-HHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECCCHH-HHHHHHHHHHCCCeEEEEecCC
Confidence            567777655 9999999999999999999864

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=81.69  E-value=0.5  Score=35.17  Aligned_cols=30  Identities=20%  Similarity=0.245  Sum_probs=26.0

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCC
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRN   86 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~   86 (255)
                      ++|.||..+ |...|.++++.|.+|.++.+.
T Consensus         6 viVIG~Gpa-Gl~aA~~aa~~G~kV~viE~~   35 (235)
T d1h6va1           6 LIIIGGGSG-GLAAAKEAAKFDKKVMVLDFV   35 (235)
T ss_dssp             EEEECCSHH-HHHHHHHHGGGCCCEEEECCC
T ss_pred             EEEECCCHH-HHHHHHHHHHCCCeEEEEecc
Confidence            678887765 999999999999999999854

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=81.66  E-value=3.6  Score=31.57  Aligned_cols=39  Identities=18%  Similarity=0.244  Sum_probs=25.6

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCC-cEEEEeCChhhHHHH
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGL-NLVLVGRNPDKLKDV   93 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~-~V~l~~r~~~~~~~~   93 (255)
                      +.+.|||.|+++|   .+++++++.+. +|.++..+++-.+-.
T Consensus        72 ~p~~vLiiG~G~G---~~~~~~l~~~~~~v~~VEiD~~Vi~~a  111 (276)
T d1mjfa_          72 KPKRVLVIGGGDG---GTVREVLQHDVDEVIMVEIDEDVIMVS  111 (276)
T ss_dssp             CCCEEEEEECTTS---HHHHHHTTSCCSEEEEEESCHHHHHHH
T ss_pred             CCceEEEecCCch---HHHHHHHHhCCceEEEecCCHHHHHHH
Confidence            3578888888876   33455555554 788888887654433

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=81.63  E-value=0.8  Score=36.11  Aligned_cols=36  Identities=19%  Similarity=0.248  Sum_probs=28.9

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChh
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPD   88 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~   88 (255)
                      +.|.++|.||+ -=|..+|.+|+++|.+|.+..++..
T Consensus         1 k~KKI~IIGaG-~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVGAG-FSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHhCCCCEEEEECCCC
Confidence            35778888875 4578888999999999999887653

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=81.50  E-value=2.9  Score=29.10  Aligned_cols=44  Identities=16%  Similarity=0.154  Sum_probs=31.5

Q ss_pred             cEEEEECCCCchHHHHHHHHHHc--CCcEEEEe--CChhhHHHHHHHH
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKT--GLNLVLVG--RNPDKLKDVSDSI   97 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~--G~~V~l~~--r~~~~~~~~~~~~   97 (255)
                      |.+.|-|+||-||.....-..+.  .++|+..+  +|.+.+.+...+.
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f   49 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEF   49 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHH
Confidence            56899999999999999888775  46776654  4445555444443

>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoP receiver domain
species: Bacillus subtilis [TaxId: 1423]

Probab=81.45  E-value=5.2  Score=26.13  Aligned_cols=79  Identities=14%  Similarity=0.227  Sum_probs=51.0

Q ss_pred             cEEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC-CcHHHHHHHHHHhcCCC
Q 025260           54 SWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG-DLDEGVERIKEAIEGLD  132 (255)
Q Consensus        54 k~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~~  132 (255)
                      |++||.=-..-+-..+...|-+.|++|..+....+.+    +.+++.  ...+...+..+.+ +--+.+.++++..+..+
T Consensus         3 krILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~al----~~l~~~--~~dlillD~~mp~~~G~~~~~~~r~~~~~~~   76 (121)
T d1mvoa_           3 KKILVVDDEESIVTLLQYNLERSGYDVITASDGEEAL----KKAETE--KPDLIVLDVMLPKLDGIEVCKQLRQQKLMFP   76 (121)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHH----HHHHHH--CCSEEEEESSCSSSCHHHHHHHHHHTTCCCC
T ss_pred             CCEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHH----HHHhcc--cccEEEecccccCCCCchhhhhhhccCCCCE
Confidence            5678888888888889999999999988655433333    333333  4556777777766 33556677776544444


Q ss_pred             ccEEEEec
Q 025260          133 VGVLINNV  140 (255)
Q Consensus       133 id~lv~na  140 (255)
                        +++..+
T Consensus        77 --ii~lt~   82 (121)
T d1mvoa_          77 --ILMLTA   82 (121)
T ss_dssp             --EEEEEC
T ss_pred             --EEEEEe
Confidence              555444

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=81.43  E-value=0.73  Score=34.48  Aligned_cols=33  Identities=24%  Similarity=0.315  Sum_probs=26.9

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCChhh
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDK   89 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~   89 (255)
                      |+|.||. --|...|.+|+++|.+|+++.++...
T Consensus         5 ViIIGaG-~aGl~aA~~la~~G~~V~liEk~~~~   37 (251)
T d2i0za1           5 VIVIGGG-PSGLMAAIGAAEEGANVLLLDKGNKL   37 (251)
T ss_dssp             EEEECCS-HHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence            5677665 57788999999999999999987643

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=81.36  E-value=0.67  Score=32.84  Aligned_cols=31  Identities=19%  Similarity=0.226  Sum_probs=24.4

Q ss_pred             CCcEEEEECCCCchHHHHHHHHHHcCCcEEEE
Q 025260           52 YGSWALVTGPTDGIGKSFAFQLAKTGLNLVLV   83 (255)
Q Consensus        52 ~gk~vlITGas~gIG~~la~~la~~G~~V~l~   83 (255)
                      +++.|+|.|| |.+|.++|.+|.+.|.+|.++
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~   32 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIR   32 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEE
Confidence            4677777775 589999999999999875444

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=81.18  E-value=0.73  Score=33.75  Aligned_cols=31  Identities=16%  Similarity=0.108  Sum_probs=26.9

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCCh
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP   87 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~~   87 (255)
                      ++|.|| |-.|.+.|.++++.|.+|.++.++.
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~~   35 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAKE   35 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            677777 6789999999999999999998863

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=80.75  E-value=0.77  Score=33.60  Aligned_cols=31  Identities=16%  Similarity=0.217  Sum_probs=26.5

Q ss_pred             EEEECCCCchHHHHHHHHHHcCCcEEEEeCCh
Q 025260           56 ALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP   87 (255)
Q Consensus        56 vlITGas~gIG~~la~~la~~G~~V~l~~r~~   87 (255)
                      |+|.||. -.|.+.|..+++.|.+|+++.+++
T Consensus         6 vvVIGgG-paGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           6 VVIIGGG-PGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             EEEECCS-HHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             EEEECCC-HHHHHHHHHHHHCCCcEEEEEecC
Confidence            6778874 569999999999999999998753

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=80.46  E-value=2  Score=32.76  Aligned_cols=60  Identities=10%  Similarity=0.141  Sum_probs=44.6

Q ss_pred             CCcEEEEECCC-CchHHHHHHHHHHcC-CcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC
Q 025260           52 YGSWALVTGPT-DGIGKSFAFQLAKTG-LNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG  115 (255)
Q Consensus        52 ~gk~vlITGas-~gIG~~la~~la~~G-~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  115 (255)
                      .|++|+-.||+ |+++..+|    ++| ++|+.++.|+...+.+.+.++..+-..++.++..|..+
T Consensus       107 ~g~~VlD~~aG~G~~~l~~a----~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~  168 (260)
T d2frna1         107 PDELVVDMFAGIGHLSLPIA----VYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRD  168 (260)
T ss_dssp             TTCEEEETTCTTTTTHHHHH----HHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTT
T ss_pred             CccEEEECcceEcHHHHHHH----HhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHH
Confidence            48899998887 45555544    445 59999999999988888877765545568888887654

>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein PrrA, N-terminal domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=80.38  E-value=4.9  Score=26.35  Aligned_cols=79  Identities=11%  Similarity=0.093  Sum_probs=52.1

Q ss_pred             EEEEECCCCchHHHHHHHHHHcCCcEEEEeCChhhHHHHHHHHHhhcCCceEEEEEEECCC-CcHHHHHHHHHHhcCCCc
Q 025260           55 WALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNPDKLKDVSDSIQAKYAKTQIKSVVVDFSG-DLDEGVERIKEAIEGLDV  133 (255)
Q Consensus        55 ~vlITGas~gIG~~la~~la~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~~i  133 (255)
                      ++||.=-...+...+...|.+.|++|.... +..   ++.+.+++.  ...+..++..+.+ +--+.++++++.....+ 
T Consensus         3 kILiVDD~~~~~~~l~~~L~~~g~~v~~a~-~~~---eal~~~~~~--~~dlvl~D~~mP~~~G~el~~~ir~~~~~~p-   75 (121)
T d1ys7a2           3 RVLVVDDDSDVLASLERGLRLSGFEVATAV-DGA---EALRSATEN--RPDAIVLDINMPVLDGVSVVTALRAMDNDVP-   75 (121)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHTTCEEEEES-SHH---HHHHHHHHS--CCSEEEEESSCSSSCHHHHHHHHHHTTCCCC-
T ss_pred             EEEEEECCHHHHHHHHHHHHHCCCEEEEEC-CHH---HHHHHHHhC--CCCEEEEEeeccCcccHHHHHHHHhcCCCCE-
Confidence            467777777888899999999999988655 333   333334433  3456666666665 34667788887655545 


Q ss_pred             cEEEEecC
Q 025260          134 GVLINNVG  141 (255)
Q Consensus       134 d~lv~nag  141 (255)
                       +++..+-
T Consensus        76 -iI~lt~~   82 (121)
T d1ys7a2          76 -VCVLSAR   82 (121)
T ss_dssp             -EEEEECC
T ss_pred             -EEEEEee
Confidence             6666554

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=80.13  E-value=0.94  Score=33.32  Aligned_cols=37  Identities=27%  Similarity=0.305  Sum_probs=30.9

Q ss_pred             ccCCcEEEEECCCCchHHHHHHHHHHcCCcEEEEeCCh
Q 025260           50 RKYGSWALVTGPTDGIGKSFAFQLAKTGLNLVLVGRNP   87 (255)
Q Consensus        50 ~~~gk~vlITGas~gIG~~la~~la~~G~~V~l~~r~~   87 (255)
                      .++||.|+|.|++. =|..+|.++++.++++....|..
T Consensus        29 ~~~gK~V~VvG~G~-Sa~dia~~~~~~~~~~~~~~~~~   65 (235)
T d1w4xa2          29 DFSGQRVGVIGTGS-SGIQVSPQIAKQAAELFVFQRTP   65 (235)
T ss_dssp             CCBTCEEEEECCSH-HHHHHHHHHHHHBSEEEEEESSC
T ss_pred             CCCCCEEEEECCCc-cHHHHHHHHHhhhcccccccccc
Confidence            46799999998874 37999999999999988877763