Citrus Sinensis ID: 025284
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 255 | ||||||
| 255554723 | 255 | alkaline phytoceramidase, putative [Rici | 1.0 | 1.0 | 0.886 | 1e-135 | |
| 224118004 | 256 | predicted protein [Populus trichocarpa] | 0.988 | 0.984 | 0.869 | 1e-132 | |
| 224147238 | 256 | predicted protein [Populus trichocarpa] | 0.988 | 0.984 | 0.853 | 1e-131 | |
| 224113865 | 256 | predicted protein [Populus trichocarpa] | 0.988 | 0.984 | 0.853 | 1e-130 | |
| 18415901 | 255 | dihydroceramidase [Arabidopsis thaliana] | 1.0 | 1.0 | 0.839 | 1e-129 | |
| 297803888 | 255 | ATCES1 [Arabidopsis lyrata subsp. lyrata | 1.0 | 1.0 | 0.839 | 1e-129 | |
| 357447851 | 255 | Alkaline ceramidase [Medicago truncatula | 1.0 | 1.0 | 0.843 | 1e-127 | |
| 217073384 | 255 | unknown [Medicago truncatula] | 1.0 | 1.0 | 0.839 | 1e-127 | |
| 449434014 | 255 | PREDICTED: alkaline ceramidase 3-like [C | 1.0 | 1.0 | 0.811 | 1e-126 | |
| 356562676 | 254 | PREDICTED: alkaline ceramidase 3-like [G | 0.996 | 1.0 | 0.819 | 1e-124 |
| >gi|255554723|ref|XP_002518399.1| alkaline phytoceramidase, putative [Ricinus communis] gi|223542244|gb|EEF43786.1| alkaline phytoceramidase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 226/255 (88%), Positives = 245/255 (96%)
Query: 1 MADGISSFWGPVTSTIECCEKNYAYSSYIAEFYNTLSNIPTILLALIGLINALRQRFEKR 60
MADGISSFWGPVTST ECCEKNYA+SSYIAEFYNT+SNIP ILLALIGLINALRQRFEKR
Sbjct: 1 MADGISSFWGPVTSTTECCEKNYAHSSYIAEFYNTISNIPCILLALIGLINALRQRFEKR 60
Query: 61 FSVLHISNMILAMGSMLYHATLQRVQQQSDETPMVWEMLLYMYILYSPDWHYRSTMPTFL 120
FSVLHISNMILA+GSM +HATLQRVQQQSDETPMVWEMLLYMYILYSPDWHYRSTMPTFL
Sbjct: 61 FSVLHISNMILAIGSMFFHATLQRVQQQSDETPMVWEMLLYMYILYSPDWHYRSTMPTFL 120
Query: 121 FLYGAVFAVVHSVVHFGIGFKLHYVILCLLCIPRMYKYYIHTQDAAAKLLAKMYVASIFL 180
FLYGAVFA+VHSVVHFGIGFK+HYVILCLLCIPRMYKYYI+TQDAAAK LAK+YVA++F+
Sbjct: 121 FLYGAVFAIVHSVVHFGIGFKVHYVILCLLCIPRMYKYYIYTQDAAAKWLAKLYVATLFI 180
Query: 181 GSLCWLGDRLFCEEVSGWPVNPQGHALWHVFMGFNSYFANTFLMFCRAQQRGWAPRVVYL 240
GSLCWL DR+FC+++S WP+NPQGHALWHVFMGFNSYFANTFLMFCRA+QRGW+P+VV
Sbjct: 181 GSLCWLCDRIFCKKISNWPINPQGHALWHVFMGFNSYFANTFLMFCRAEQRGWSPKVVCF 240
Query: 241 MGILPYVKIEKPKSQ 255
GILPYVKIEKPK Q
Sbjct: 241 AGILPYVKIEKPKVQ 255
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224118004|ref|XP_002331534.1| predicted protein [Populus trichocarpa] gi|222873758|gb|EEF10889.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224147238|ref|XP_002336433.1| predicted protein [Populus trichocarpa] gi|222835008|gb|EEE73457.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224113865|ref|XP_002316596.1| predicted protein [Populus trichocarpa] gi|222859661|gb|EEE97208.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|18415901|ref|NP_567660.1| dihydroceramidase [Arabidopsis thaliana] gi|14488266|dbj|BAB60897.1| Acyl-CoA independent ceramide synthase [Arabidopsis thaliana] gi|30793847|gb|AAP40376.1| unknown protein [Arabidopsis thaliana] gi|30794039|gb|AAP40465.1| unknown protein [Arabidopsis thaliana] gi|332659194|gb|AEE84594.1| dihydroceramidase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297803888|ref|XP_002869828.1| ATCES1 [Arabidopsis lyrata subsp. lyrata] gi|297315664|gb|EFH46087.1| ATCES1 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|357447851|ref|XP_003594201.1| Alkaline ceramidase [Medicago truncatula] gi|87162688|gb|ABD28483.1| Alkaline phytoceramidase [Medicago truncatula] gi|355483249|gb|AES64452.1| Alkaline ceramidase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|217073384|gb|ACJ85051.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|449434014|ref|XP_004134791.1| PREDICTED: alkaline ceramidase 3-like [Cucumis sativus] gi|449479510|ref|XP_004155620.1| PREDICTED: alkaline ceramidase 3-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356562676|ref|XP_003549595.1| PREDICTED: alkaline ceramidase 3-like [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 255 | ||||||
| TAIR|locus:2132110 | 255 | ATCES1 "AT4G22330" [Arabidopsi | 1.0 | 1.0 | 0.764 | 4.8e-110 | |
| MGI|MGI:1913440 | 267 | Acer3 "alkaline ceramidase 3" | 0.925 | 0.883 | 0.3 | 1.4e-25 | |
| UNIPROTKB|A7MBH7 | 267 | ACER3 "ACER3 protein" [Bos tau | 0.968 | 0.925 | 0.281 | 7.6e-25 | |
| UNIPROTKB|E2RMS2 | 267 | ACER3 "Uncharacterized protein | 0.941 | 0.898 | 0.300 | 2.6e-24 | |
| UNIPROTKB|E1C413 | 267 | ACER3 "Uncharacterized protein | 0.956 | 0.913 | 0.282 | 3.3e-24 | |
| UNIPROTKB|Q9NUN7 | 267 | ACER3 "Alkaline ceramidase 3" | 0.941 | 0.898 | 0.296 | 3.3e-24 | |
| UNIPROTKB|B7Z2Q2 | 230 | ACER3 "Alkaline ceramidase 3" | 0.745 | 0.826 | 0.275 | 4.1e-21 | |
| ZFIN|ZDB-GENE-091204-155 | 265 | acer3 "alkaline ceramidase 3" | 0.952 | 0.916 | 0.277 | 8.3e-19 | |
| SGD|S000000387 | 316 | YPC1 "Alkaline ceramidase" [Sa | 0.376 | 0.303 | 0.364 | 2.1e-18 | |
| SGD|S000006008 | 317 | YDC1 "Alkaline dihydroceramida | 0.403 | 0.324 | 0.320 | 7.1e-18 |
| TAIR|locus:2132110 ATCES1 "AT4G22330" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1087 (387.7 bits), Expect = 4.8e-110, P = 4.8e-110
Identities = 195/255 (76%), Positives = 213/255 (83%)
Query: 1 MADGISSFWGPVTSTIECCEKNYAYSSYIAEFYNTLSNIPTXXXXXXXXXXXXRQRFEKR 60
MADGISSFWGPVTSTIECCE NYAYSSYIAEFYNT+SN+P RQRFEKR
Sbjct: 1 MADGISSFWGPVTSTIECCEMNYAYSSYIAEFYNTISNVPGILLALIGLVNALRQRFEKR 60
Query: 61 FSVLHISNMILAMGSMLYHATLQRVQQQSDETPMVWEMLLYMYILYSPDWHYRSTMPTFL 120
FS+LHISNMILA+GSMLYHATLQ VQQQSDETPMVWE+LLYMYILYSPDWHYRSTMPTFL
Sbjct: 61 FSILHISNMILAIGSMLYHATLQHVQQQSDETPMVWEILLYMYILYSPDWHYRSTMPTFL 120
Query: 121 FLYXXXXXXXXXXXXXXIGFKLHYVILCLLCIPRMYKYYIHTQDAAAKLLAKMYVASIFL 180
FLY IGFK+HYVILCLLCIPRMYKYYIHT+D AAK +AK YVA+I +
Sbjct: 121 FLYGAAFAIVHAYLRFGIGFKVHYVILCLLCIPRMYKYYIHTEDTAAKRIAKWYVATILV 180
Query: 181 GSLCWLGDRLFCEEVSGWPVNPQGHALWHVFMGFNSYFANTFLMFCRAQQRGWAPRVVYL 240
GS+CW DR+FC+ +S WPVNPQGHALWHVFM FNSY ANTFLMFCRAQQRGW P+V Y
Sbjct: 181 GSICWFCDRVFCKTISQWPVNPQGHALWHVFMSFNSYCANTFLMFCRAQQRGWNPKVKYF 240
Query: 241 MGILPYVKIEKPKSQ 255
+G+LPYVKIEKPK+Q
Sbjct: 241 LGVLPYVKIEKPKTQ 255
|
|
| MGI|MGI:1913440 Acer3 "alkaline ceramidase 3" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|A7MBH7 ACER3 "ACER3 protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2RMS2 ACER3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1C413 ACER3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9NUN7 ACER3 "Alkaline ceramidase 3" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B7Z2Q2 ACER3 "Alkaline ceramidase 3" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-091204-155 acer3 "alkaline ceramidase 3" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| SGD|S000000387 YPC1 "Alkaline ceramidase" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
| SGD|S000006008 YDC1 "Alkaline dihydroceramidase, involved in sphingolipid metabolism" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 255 | |||
| pfam05875 | 264 | pfam05875, Ceramidase, Ceramidase | 5e-77 |
| >gnl|CDD|218789 pfam05875, Ceramidase, Ceramidase | Back alignment and domain information |
|---|
Score = 233 bits (597), Expect = 5e-77
Identities = 88/264 (33%), Positives = 128/264 (48%), Gaps = 20/264 (7%)
Query: 6 SSFWGPVTSTIECCEKNYAYSSYIAEFYNTLSNIPTILLALIGLINALRQRFEKRFSVLH 65
+WGP TSTI+ CE+NY S YIAEF NTLSN+ ILL L G+ A R + EKRF +++
Sbjct: 1 DGYWGPPTSTIDWCEENYVISPYIAEFVNTLSNLIFILLGLYGIYLARRNKLEKRFILIY 60
Query: 66 ISNMILAMGSMLYHATLQRVQQQSDETPMVWEMLLYMYILYS----PDWHYRSTMPTFLF 121
+ +++ +GS L+H TL+ Q DE PM++ + +Y + R+ + LF
Sbjct: 61 LGLILVGLGSWLFHMTLKYHGQLLDELPMIYATCIPLYSWFPRRKFFFKRDRTVLAILLF 120
Query: 122 LYGAVFAVVHSVVH----FGIGFKLHYVILCLLCIPRMYKY-YIHTQDAAAKLLAKMYVA 176
L A+ V++ ++ + F L + + L I M +Y L K+ VA
Sbjct: 121 LLAAIVTVLYFILKNPVIHQVAFGLLTIPVVLRSIYLMKRYVRDSVARKNLWRLMKLGVA 180
Query: 177 SIFLGSLCWLGDRLFCEEVSG--------WPVNPQGHALWHVFMGFNSYFANTFLMFCRA 228
LG CW DR FC W V + H WH+ G +Y+ FL + RA
Sbjct: 181 LFLLGFFCWNLDRHFCSFWRRIRRPYGLPWGVLLELHGWWHILTGLGAYYYIVFLAYLRA 240
Query: 229 QQRGWAPRVVYL---MGILPYVKI 249
G P+ + G LPYV I
Sbjct: 241 LLEGPEPKFKLIWWPWGGLPYVVI 264
|
This family consists of several ceramidases. Ceramidases are enzymes involved in regulating cellular levels of ceramides, sphingoid bases, and their phosphates, EC:3.5.1.23. Length = 264 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 255 | |||
| PF05875 | 262 | Ceramidase: Ceramidase; InterPro: IPR008901 This e | 100.0 | |
| KOG2329 | 276 | consensus Alkaline ceramidase [Lipid transport and | 100.0 | |
| PRK15087 | 219 | hemolysin; Provisional | 98.01 | |
| PF03006 | 222 | HlyIII: Haemolysin-III related; InterPro: IPR00425 | 97.67 | |
| PF12036 | 186 | DUF3522: Protein of unknown function (DUF3522); In | 97.46 | |
| PF13965 | 570 | SID-1_RNA_chan: dsRNA-gated channel SID-1 | 97.42 | |
| TIGR01065 | 204 | hlyIII channel protein, hemolysin III family. This | 97.34 | |
| PF04080 | 267 | Per1: Per1-like ; InterPro: IPR007217 A member of | 97.29 | |
| PF15100 | 242 | TMEM187: TMEM187 protein family | 96.79 | |
| COG1272 | 226 | Predicted membrane protein, hemolysin III homolog | 96.26 | |
| KOG2970 | 319 | consensus Predicted membrane protein [Function unk | 94.81 | |
| KOG4243 | 298 | consensus Macrophage maturation-associated protein | 92.98 | |
| COG5237 | 319 | PER1 Predicted membrane protein [Function unknown] | 92.83 |
| >PF05875 Ceramidase: Ceramidase; InterPro: IPR008901 This entry consists of several ceramidases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-67 Score=469.79 Aligned_cols=243 Identities=36% Similarity=0.646 Sum_probs=211.4
Q ss_pred CCccccccccchhhhhcCcccccccchhhhhhhHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHhhhhhhhhcccccc
Q 025284 6 SSFWGPVTSTIECCEKNYAYSSYIAEFYNTLSNIPTILLALIGLINALRQRFEKRFSVLHISNMILAMGSMLYHATLQRV 85 (255)
Q Consensus 6 ~g~Wg~~tS~~dwCE~~y~~s~yiaEf~NtlSNl~F~~~~l~gl~~~~~~~~~~~~~~~~~~l~~vGiGS~~FH~tl~~~ 85 (255)
||||||+||++|||||||++|+|||||+||+||++|+++|++|+++.+|++.+.++.+.++++++||+||++||+|++++
T Consensus 1 ~g~wg~~ts~~dwCE~nY~~s~yiAEf~NtlSNl~fi~~al~gl~~~~~~~~~~~~~l~~~~l~~VGiGS~~FHaTl~~~ 80 (262)
T PF05875_consen 1 DGYWGPPTSTIDWCEENYVVSPYIAEFWNTLSNLAFIVAALYGLYLARRRGLERRFALLYLGLALVGIGSFLFHATLSYW 80 (262)
T ss_pred CCCCCCCCcccccchhccccCcccchHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHhHHHHHhChhhh
Confidence 69999999999999999999999999999999999999999999999888889999999999999999999999999999
Q ss_pred ccccCchhHHHHHHHHHHHHhcCCc---cchhhhhHHHHHHHHHhhhhhhhhcchhhHHHHHHHHHHHHHHHHHHHHhh-
Q 025284 86 QQQSDETPMVWEMLLYMYILYSPDW---HYRSTMPTFLFLYGAVFAVVHSVVHFGIGFKLHYVILCLLCIPRMYKYYIH- 161 (255)
Q Consensus 86 ~ql~DeLpM~~~~~~~~~~~~~~~~---~~~~~~~~~l~l~~~~~~v~~~~~~~~~~~~~~y~~l~~~~i~~~~~~~~~- 161 (255)
+|++||+||+++++.+++.++.++. ..+...+..+..+.+..++.+...+++..+|+.|+.++..++.+.....++
T Consensus 81 ~ql~DelPMl~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~t~~~~~~~~p~~~~~~f~~~~~~~~~~~~~~~~~~ 160 (262)
T PF05875_consen 81 TQLLDELPMLWATLLFLYIVLTRRYSSPRYRLALPLLLFIYAVVVTVLYFVLDNPVFHQIAFASLVLLVILRSIYLIRRR 160 (262)
T ss_pred HHHhhhhhHHHHHHHHHHHHhcccccCchhhHHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999988887654 233344566666667777778778888999999998877776665544443
Q ss_pred ----hccHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCC--------CCCcccchHHHHHHHhHHHHHHHHHHHHHHh
Q 025284 162 ----TQDAAAKLLAKMYVASIFLGSLCWLGDRLFCEEVSGW--------PVNPQGHALWHVFMGFNSYFANTFLMFCRAQ 229 (255)
Q Consensus 162 ----~~~~~~~~~~~~~~~~f~la~~~w~~D~~~C~~l~~~--------~~~~~~H~~WHiltal~~y~~~~~~~~~~~~ 229 (255)
.++++.+++...++++|++|+++|++|+.+|+.++.+ ++++|+|+||||+||+|+|+.+++++++|..
T Consensus 161 ~~~~~~~~~~~~l~~~~~~~f~~a~~~W~iD~~~C~~~~~~~~~~g~p~~~~le~H~~WHilt~ig~Y~~~~~~~~~~~~ 240 (262)
T PF05875_consen 161 VRDACRRRRARRLLLFGLALFLVAFFFWNIDRIFCSSLRAIRFPYGLPLGFLLELHAWWHILTGIGAYLLIVFVAYLRAL 240 (262)
T ss_pred cCchhhchHHHHHHHHHHHHHHHHHHHHHhHHHHHccccccccccCCcchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567788999999999999999999999999999974 3568999999999999999999999999976
Q ss_pred hc--CCcceEee-eccccceEE
Q 025284 230 QR--GWAPRVVY-LMGILPYVK 248 (255)
Q Consensus 230 ~~--~~~~~~~~-~~g~~p~v~ 248 (255)
++ +++++++| +.+.+|||+
T Consensus 241 ~~~~~~~~~~~~~~~~~~P~v~ 262 (262)
T PF05875_consen 241 YEGPEPKPKLKWPPWGGLPYVK 262 (262)
T ss_pred HhCCCCceEEEEecCCCCceeC
Confidence 55 55678887 567779985
|
Ceramidases are enzymes involved in regulating cellular levels of ceramides, sphingoid bases, and their phosphates.; GO: 0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides, 0006672 ceramide metabolic process, 0016021 integral to membrane |
| >KOG2329 consensus Alkaline ceramidase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK15087 hemolysin; Provisional | Back alignment and domain information |
|---|
| >PF03006 HlyIII: Haemolysin-III related; InterPro: IPR004254 Members of this family are integral membrane proteins | Back alignment and domain information |
|---|
| >PF12036 DUF3522: Protein of unknown function (DUF3522); InterPro: IPR021910 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
| >PF13965 SID-1_RNA_chan: dsRNA-gated channel SID-1 | Back alignment and domain information |
|---|
| >TIGR01065 hlyIII channel protein, hemolysin III family | Back alignment and domain information |
|---|
| >PF04080 Per1: Per1-like ; InterPro: IPR007217 A member of this family has been implemented in protein processing in the endoplasmic reticulum [] | Back alignment and domain information |
|---|
| >PF15100 TMEM187: TMEM187 protein family | Back alignment and domain information |
|---|
| >COG1272 Predicted membrane protein, hemolysin III homolog [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2970 consensus Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG4243 consensus Macrophage maturation-associated protein [Defense mechanisms] | Back alignment and domain information |
|---|
| >COG5237 PER1 Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 255 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.1 bits (103), Expect = 3e-05
Identities = 39/207 (18%), Positives = 69/207 (33%), Gaps = 47/207 (22%)
Query: 12 VTSTIECCEKNYAYSSYIAEFYNTLS------NIPTILLALI------------------ 47
+T+ IE N + + ++ LS +IPTILL+LI
Sbjct: 355 LTTIIESS-LNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHK 413
Query: 48 -GLINALRQRFEKRFSV--LHISNMILAMGSMLYHATL------QRVQQQSDETPMVWEM 98
L+ +Q E S+ +++ + H ++ + D P +
Sbjct: 414 YSLVE--KQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQ 471
Query: 99 LLYMYILYSPDWHYRSTMPTFLF-LYGAVFA----VVHSVVHFGIGFKLHYVILCLLCIP 153
Y +I + H ++ L+ VF + + H + IL L
Sbjct: 472 YFYSHIGH----HLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQL 527
Query: 154 RMYKYYIHTQDAAAKLLAKMYVASIFL 180
+ YK YI D + L + FL
Sbjct: 528 KFYKPYICDNDPKYERLVNAILD--FL 552
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00