Citrus Sinensis ID: 025374

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250----
MAVFAPLSSFLFLLQLLGLILSVNVVFFLSFGRQQCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVRNMSGEWISAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSPKYRVCVAYFYETNFDAAVEPLDICKQRTGETKQFGRAVYGEHLVSKVTTNFVM
cccccccccHHHHHHHHcccccccEEEEEccccccccHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEccccccccccccccccccccccccccccccEEEEEcccccccEEEcccccEEEcccccccEEEEHHHHHHHHHccccccccccccccccccEEEEEEEEccccccEEEcccccccccccccccccccHHHHHHHHHHccccc
ccccccHHHHHHHHcccccccccccEEEEEccccccHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccEEEEEccccccccccccccccccccccccccccEEEEEccccccEEEEEEEccEEEEcccccccEEEEEcHHHHHHcccccccccEEEcccccccEEEEEEEEEccccccEcccHHHccccccccccccccHHHHHHHHHHccccc
mavfaplsSFLFLLQLLGLILSVNVVFFLSFGRQQCYKEIQEGMYGalgktmegcnqwplnppnFRALMEEYVNLCTDLSRKIMRGIALalggspfefegvragdAFWVLRIIgypglsgakdqkkpennigcgahtdyglltlvnqdddiTALEVRNmsgewisappipgtfvcnIGDMLKIYSnglyestlhrvvnsspkyRVCVAYFYEtnfdaavepldickqrtgetkqfgravygEHLVSKVTTNFVM
MAVFAPLSSFLFLLQLLGLILSVNVVFFLSFGRQQCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVRNMSGEWISAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSPKYRVCVAYFYETNFDAAVEPLDICKQRTGETKQfgravygehlvskvttnfvm
MAVFAPlssflfllqllglilsVNVVFFLSFGRQQCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVRNMSGEWISAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSPKYRVCVAYFYETNFDAAVEPLDICKQRTGETKQFGRAVYGEHLVSKVTTNFVM
**VFAPLSSFLFLLQLLGLILSVNVVFFLSFGRQQCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSG********NNIGCGAHTDYGLLTLVNQDDDITALEVRNMSGEWISAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSPKYRVCVAYFYETNFDAAVEPLDICKQRTGETKQFGRAVYGEHLVSKVTT****
*******SSFLFLLQLLGLILSVNVVFFLSFGRQQCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGA****K***NIGCGAHTDYGLLTLVNQDDDITALEVRNMSGEWISAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSPKYRVCVAYFYETNFDAAVEPLDICKQ**G*TKQFGRAVYGEHLVSKVTTNFV*
MAVFAPLSSFLFLLQLLGLILSVNVVFFLSFGRQQCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVRNMSGEWISAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSPKYRVCVAYFYETNFDAAVEPLDICKQRTGETKQFGRAVYGEHLVSKVTTNFVM
**VFAPLSSFLFLLQLLGLILSVNVVFFLSFGRQQCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVRNMSGEWISAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSPKYRVCVAYFYETNFDAAVEPLDICKQRTGETKQFGRAVYGEHLVSKVTTNF**
oooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAVFAPLSSFLFLLQLLGLILSVNVVFFLSFGRQQCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVRNMSGEWISAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSPKYRVCVAYFYETNFDAAVEPLDICKQRTGETKQFGRAVYGEHLVSKVTTNFVM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query254 2.2.26 [Sep-21-2011]
Q54RA4363 Probable iron/ascorbate o yes no 0.732 0.512 0.341 1e-24
A6BM06368 1-aminocyclopropane-1-car N/A no 0.720 0.497 0.316 1e-20
Q76NT9368 1-aminocyclopropane-1-car no no 0.720 0.497 0.316 1e-20
D4N501364 Probable 2-oxoglutarate/F N/A no 0.606 0.423 0.325 4e-19
Q0WPW4307 1-aminocyclopropane-1-car no no 0.696 0.576 0.319 2e-18
P40902397 Sexual differentiation pr yes no 0.755 0.483 0.281 7e-17
Q39103358 Gibberellin 3-beta-dioxyg no no 0.724 0.513 0.295 8e-17
Q39224358 Protein SRG1 OS=Arabidops no no 0.720 0.511 0.290 1e-16
D4N502360 Codeine O-demethylase OS= N/A no 0.692 0.488 0.3 2e-16
D4N500364 Thebaine 6-O-demethylase N/A no 0.606 0.423 0.300 2e-16
>sp|Q54RA4|Y3291_DICDI Probable iron/ascorbate oxidoreductase DDB_G0283291 OS=Dictyostelium discoideum GN=DDB_G0283291 PE=3 SV=1 Back     alignment and function desciption
 Score =  113 bits (282), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 112/208 (53%), Gaps = 22/208 (10%)

Query: 65  FRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQ 124
           F+  +  Y++  T L   +M  IA++L  S   F      D   + RI  YP +  + D 
Sbjct: 150 FKDTILTYIDKVTKLGHSLMELIAISLNLSADYFSSRYTKDPLILYRIFNYPSIISSGDD 209

Query: 125 KK-----PENN----IGCGAHTDYGLLTLVNQDDDITALEVRNMSGEWISAPPIPGTFVC 175
            K      ++N     G G HTDYG+LT++ QDD +  L+V + +G WISAPPI GTFVC
Sbjct: 210 NKTTGESSDDNDKVEWGVGEHTDYGVLTILYQDD-VGGLQVHSKNG-WISAPPIKGTFVC 267

Query: 176 NIGDMLKIYSNGLYESTLHRV-VNSSPKYRVCVAYFYETNFDA---AVEPLDICKQRTGE 231
           NIGDML   + GLY ST HRV +N S + R+    F++ NF++    +E ++  + +   
Sbjct: 268 NIGDMLDRMTGGLYRSTPHRVELNRSGRDRISFPLFFDPNFNSYPTEIEGIEQIENKDDS 327

Query: 232 TKQFG-------RAVYGEHLVSKVTTNF 252
           + ++        +  YG++L++K+   F
Sbjct: 328 SSRWDHFNIHSFKGSYGQYLLNKIGKVF 355

Dictyostelium discoideum (taxid: 44689)
EC: 1EC: .EC: 1EC: 4EC: .EC: -EC: .EC: -
>sp|A6BM06|ACCO1_DICMU 1-aminocyclopropane-1-carboxylate oxidase OS=Dictyostelium mucoroides GN=aco PE=3 SV=1 Back     alignment and function description
>sp|Q76NT9|ACCO1_DICDI 1-aminocyclopropane-1-carboxylate oxidase OS=Dictyostelium discoideum GN=aco PE=2 SV=1 Back     alignment and function description
>sp|D4N501|DIOX2_PAPSO Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum GN=DIOX2 PE=2 SV=1 Back     alignment and function description
>sp|Q0WPW4|ACCO5_ARATH 1-aminocyclopropane-1-carboxylate oxidase 5 OS=Arabidopsis thaliana GN=At1g77330 PE=2 SV=1 Back     alignment and function description
>sp|P40902|ISP7_SCHPO Sexual differentiation process protein isp7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=isp7 PE=2 SV=1 Back     alignment and function description
>sp|Q39103|G3OX1_ARATH Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2 Back     alignment and function description
>sp|Q39224|SRG1_ARATH Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1 Back     alignment and function description
>sp|D4N502|DIOX3_PAPSO Codeine O-demethylase OS=Papaver somniferum GN=CODM PE=1 SV=1 Back     alignment and function description
>sp|D4N500|DIOX1_PAPSO Thebaine 6-O-demethylase OS=Papaver somniferum GN=T6ODM PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query254
449468303329 PREDICTED: probable iron/ascorbate oxido 0.862 0.665 0.799 1e-103
449484025329 PREDICTED: probable iron/ascorbate oxido 0.862 0.665 0.799 1e-103
255585117327 Flavonol synthase/flavanone 3-hydroxylas 0.854 0.663 0.794 1e-100
224096718343 2-oxoglutarate-dependent dioxygenase [Po 0.862 0.638 0.729 1e-98
225438799330 PREDICTED: probable iron/ascorbate oxido 0.866 0.666 0.763 5e-98
6984228329 putative flavonol synthase-like protein 0.858 0.662 0.766 2e-96
363808340331 uncharacterized protein LOC100789278 [Gl 0.862 0.661 0.730 3e-95
21554579332 flavonol synthase-like protein [Arabidop 0.854 0.653 0.739 1e-93
388505654218 unknown [Medicago truncatula] 0.830 0.967 0.739 2e-93
18409039332 2-oxoglutarate-Fe(II)-dependent oxygenas 0.854 0.653 0.735 2e-93
>gi|449468303|ref|XP_004151861.1| PREDICTED: probable iron/ascorbate oxidoreductase DDB_G0283291-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 175/219 (79%), Positives = 193/219 (88%)

Query: 35  QCYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGS 94
            CY+E + G YG LGKTMEG NQWPL+PPNF+ LMEEY+NLCTD+SR IMRGIALALGGS
Sbjct: 111 DCYREFKPGTYGTLGKTMEGSNQWPLDPPNFKQLMEEYINLCTDVSRNIMRGIALALGGS 170

Query: 95  PFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITAL 154
           P+EFEG RAG++FWV R+IGYPG+S  K    PEN+IGCGAHTDYGLLTLVNQDDDITAL
Sbjct: 171 PYEFEGDRAGNSFWVTRLIGYPGISSLKASDVPENDIGCGAHTDYGLLTLVNQDDDITAL 230

Query: 155 EVRNMSGEWISAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSPKYRVCVAYFYETN 214
           +VRN+SGEWISAPPI G+FVCNIGDMLKIYSNGLYESTLHRV+N S KYRVCVAYFYETN
Sbjct: 231 QVRNLSGEWISAPPIAGSFVCNIGDMLKIYSNGLYESTLHRVINKSLKYRVCVAYFYETN 290

Query: 215 FDAAVEPLDICKQRTGETKQFGRAVYGEHLVSKVTTNFV 253
           FD AVEPL+ICK RTG   +F RAVYGEHLVSKV TNFV
Sbjct: 291 FDTAVEPLEICKNRTGGESKFKRAVYGEHLVSKVLTNFV 329

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449484025|ref|XP_004156762.1| PREDICTED: probable iron/ascorbate oxidoreductase DDB_G0283291-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255585117|ref|XP_002533264.1| Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis] gi|223526920|gb|EEF29126.1| Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224096718|ref|XP_002310710.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] gi|222853613|gb|EEE91160.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225438799|ref|XP_002283192.1| PREDICTED: probable iron/ascorbate oxidoreductase DDB_G0283291 [Vitis vinifera] gi|296082373|emb|CBI21378.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|6984228|gb|AAF34802.1|AF228663_1 putative flavonol synthase-like protein [Euphorbia esula] Back     alignment and taxonomy information
>gi|363808340|ref|NP_001241995.1| uncharacterized protein LOC100789278 [Glycine max] gi|255636451|gb|ACU18564.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|21554579|gb|AAM63621.1| flavonol synthase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|388505654|gb|AFK40893.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|18409039|ref|NP_566930.1| 2-oxoglutarate-Fe(II)-dependent oxygenase domain-containing protein [Arabidopsis thaliana] gi|79314687|ref|NP_001030834.1| 2-oxoglutarate-Fe(II)-dependent oxygenase domain-containing protein [Arabidopsis thaliana] gi|30102622|gb|AAP21229.1| At3g50210 [Arabidopsis thaliana] gi|110735865|dbj|BAE99908.1| flavonol synthase - like protein [Arabidopsis thaliana] gi|222424080|dbj|BAH20000.1| AT3G50210 [Arabidopsis thaliana] gi|332645119|gb|AEE78640.1| 2-oxoglutarate-Fe(II)-dependent oxygenase domain-containing protein [Arabidopsis thaliana] gi|332645120|gb|AEE78641.1| 2-oxoglutarate-Fe(II)-dependent oxygenase domain-containing protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query254
TAIR|locus:2074800332 AT3G50210 [Arabidopsis thalian 0.854 0.653 0.735 2.5e-88
TAIR|locus:2114683357 DIN11 "DARK INDUCIBLE 11" [Ara 0.826 0.588 0.640 2.4e-76
DICTYBASE|DDB_G0283291363 DDB_G0283291 [Dictyostelium di 0.716 0.501 0.343 5.3e-24
ASPGD|ASPL0000035942349 AN11188 [Emericella nidulans ( 0.712 0.518 0.324 3.8e-23
TIGR_CMR|SPO_2669317 SPO_2669 "oxidoreductase, 2OG- 0.724 0.580 0.358 3.8e-23
DICTYBASE|DDB_G0277497368 aco "oxidoreductase" [Dictyost 0.370 0.255 0.479 6.1e-23
TAIR|locus:2169697371 AT5G05600 [Arabidopsis thalian 0.629 0.431 0.357 1e-22
TAIR|locus:2203325329 AT1G35190 [Arabidopsis thalian 0.677 0.522 0.356 2.6e-22
TAIR|locus:504955434247 AT4G16765 [Arabidopsis thalian 0.661 0.680 0.381 9e-22
TAIR|locus:2078241286 AT3G46480 [Arabidopsis thalian 0.645 0.573 0.346 1e-20
TAIR|locus:2074800 AT3G50210 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 882 (315.5 bits), Expect = 2.5e-88, P = 2.5e-88
 Identities = 164/223 (73%), Positives = 186/223 (83%)

Query:    36 CYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSP 95
             CY+EI++G YG +GK MEG NQWP NP  F+ LMEEY+ LCTDLSRKI+RGI+LAL GSP
Sbjct:   112 CYREIKQGKYGDIGKVMEGPNQWPENPQEFKELMEEYIKLCTDLSRKILRGISLALAGSP 171

Query:    96 FEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALE 155
             +EFEG  AGD FWV+R+IGYPG      Q  PEN+IGCGAHTDYGLLTLVNQDDD TAL+
Sbjct:   172 YEFEGKMAGDPFWVMRLIGYPGAEFTNGQ--PENDIGCGAHTDYGLLTLVNQDDDKTALQ 229

Query:   156 VRNMSGEWISAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSPKYRVCVAYFYETNF 215
             VRN+ GEWISA PIPG+FVCNIGDMLKI SNG+YESTLHRV+N+SP+YRVCVA+FYETNF
Sbjct:   230 VRNLGGEWISAIPIPGSFVCNIGDMLKILSNGVYESTLHRVINNSPQYRVCVAFFYETNF 289

Query:   216 DAAVEPLDICKQR----TGETKQFGRAVYGEHLVSKVTTNFVM 254
             DA VEPLDICKQ+     G  + F RAVYGEHLVSKV TNF M
Sbjct:   290 DAVVEPLDICKQKYPGGRGGCQVFKRAVYGEHLVSKVQTNFAM 332
GO:0005506 "iron ion binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA;ISS
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009267 "cellular response to starvation" evidence=TAS
GO:0007568 "aging" evidence=TAS
TAIR|locus:2114683 DIN11 "DARK INDUCIBLE 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0283291 DDB_G0283291 [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ASPGD|ASPL0000035942 AN11188 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2669 SPO_2669 "oxidoreductase, 2OG-Fe(II) oxygenase family" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0277497 aco "oxidoreductase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TAIR|locus:2169697 AT5G05600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2203325 AT1G35190 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955434 AT4G16765 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078241 AT3G46480 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.11LOW CONFIDENCE prediction!
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
2OGox15
2-oxoglutarate-dependent dioxygenase (344 aa)
(Populus trichocarpa)
Predicted Functional Partners:
FLS6
flavonol synthase (111 aa)
  •     0.465

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query254
PLN02485329 PLN02485, PLN02485, oxidoreductase 1e-158
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 7e-51
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 3e-37
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 7e-28
PLN02947374 PLN02947, PLN02947, oxidoreductase 1e-27
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 2e-27
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 5e-27
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 4e-25
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 2e-24
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 2e-24
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 5e-21
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 6e-21
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 1e-19
PLN02216357 PLN02216, PLN02216, protein SRG1 2e-19
PLN02704335 PLN02704, PLN02704, flavonol synthase 3e-19
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 3e-19
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 5e-19
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 1e-18
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 5e-18
PLN02904357 PLN02904, PLN02904, oxidoreductase 1e-17
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 2e-17
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 4e-17
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 7e-17
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 1e-16
PLN02997325 PLN02997, PLN02997, flavonol synthase 6e-16
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 8e-14
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information 
 Score =  441 bits (1136), Expect = e-158
 Identities = 169/220 (76%), Positives = 189/220 (85%), Gaps = 3/220 (1%)

Query: 36  CYKEIQEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSP 95
           CY+E + G YG LGK MEG NQWP NP  F+ALMEEY+ LCTDLSRKI+RGIALALGGSP
Sbjct: 112 CYREFKPGKYGDLGKVMEGPNQWPENPQEFKALMEEYIKLCTDLSRKILRGIALALGGSP 171

Query: 96  FEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALE 155
            EFEG  AGD FWV+RIIGYPG+S       PEN+IGCGAHTDYGLLTLVNQDDDITAL+
Sbjct: 172 DEFEGKMAGDPFWVMRIIGYPGVSNLNGP--PENDIGCGAHTDYGLLTLVNQDDDITALQ 229

Query: 156 VRNMSGEWISAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSPKYRVCVAYFYETNF 215
           VRN+SGEWI A PIPGTFVCNIGDMLKI+SNG+Y+STLHRV+N+SPKYRVCVA+FYETNF
Sbjct: 230 VRNLSGEWIWAIPIPGTFVCNIGDMLKIWSNGVYQSTLHRVINNSPKYRVCVAFFYETNF 289

Query: 216 DAAVEPLDICKQ-RTGETKQFGRAVYGEHLVSKVTTNFVM 254
           DAAVEPLDICK+ RTG ++ F R VYGEHLV+KV TNF  
Sbjct: 290 DAAVEPLDICKEKRTGGSQVFKRVVYGEHLVNKVLTNFAN 329

Length = 329
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 254
PLN02485329 oxidoreductase 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02216357 protein SRG1 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02904357 oxidoreductase 100.0
PLN02997325 flavonol synthase 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02704335 flavonol synthase 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02947374 oxidoreductase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.91
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.79
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 95.42
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 95.15
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 92.82
PF13532194 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; 89.87
PRK15401213 alpha-ketoglutarate-dependent dioxygenase AlkB; Pr 88.93
TIGR02466201 conserved hypothetical protein. This family consis 86.58
>PLN02485 oxidoreductase Back     alignment and domain information 
Probab=100.00  E-value=3.8e-55  Score=398.44  Aligned_cols=202  Identities=79%  Similarity=1.332  Sum_probs=182.0

Q ss_pred             CCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccccccCccceeeeeeccCCCCCCCCCCCCCc
Q 025374           51 TMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENN  130 (254)
Q Consensus        51 ~~~~~n~wP~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~~  130 (254)
                      .+.++|+||+.+++||+++++|+++|.+++.+|++++|++||+++++|.+.+..++.+.+|++|||+++...  ..++..
T Consensus       127 ~~~~~n~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~~a~~Lgl~~~~f~~~~~~~~~~~lrl~~YP~~~~~~--~~~~~~  204 (329)
T PLN02485        127 VMEGPNQWPENPQEFKALMEEYIKLCTDLSRKILRGIALALGGSPDEFEGKMAGDPFWVMRIIGYPGVSNLN--GPPEND  204 (329)
T ss_pred             ccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhhhhccCccceEEEEeCCCCcccc--CCcccC
Confidence            345789999999999999999999999999999999999999999888765544556789999999998521  123467


Q ss_pred             cccccccCCCCeEEEeecCCCCceeEEcCCCCeEecCCCCCcEEEechhHHHHhhcCCcccccccccCCCCCceeeeEee
Q 025374          131 IGCGAHTDYGLLTLVNQDDDITALEVRNMSGEWISAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSPKYRVCVAYF  210 (254)
Q Consensus       131 ~g~~~HtD~g~lTlL~qd~~~~GLqv~~~~g~W~~V~p~~g~lvVniGd~le~~TnG~~ka~~HRV~~~~~~~R~Sia~F  210 (254)
                      +|+++|||+|+||||+||++++||||++++|+|++|+|.+|++|||+||+|++||||+|||++|||+.+...+|||++||
T Consensus       205 ~g~~~HTD~g~lTlL~qd~~~~GLqV~~~~g~Wi~V~p~pg~~vVNiGD~L~~~TnG~~~St~HRVv~~~~~~R~Si~~F  284 (329)
T PLN02485        205 IGCGAHTDYGLLTLVNQDDDITALQVRNLSGEWIWAIPIPGTFVCNIGDMLKIWSNGVYQSTLHRVINNSPKYRVCVAFF  284 (329)
T ss_pred             cccccccCCCeEEEEeccCCCCeeeEEcCCCcEEECCCCCCcEEEEhHHHHHHHHCCEeeCCCceecCCCCCCeEEEEEE
Confidence            89999999999999999856899999988999999999999999999999999999999999999998877889999999


Q ss_pred             eecCCCceEecCccccc-cCCCCCCCccccHHHHHHHHHHhhcCC
Q 025374          211 YETNFDAAVEPLDICKQ-RTGETKQFGRAVYGEHLVSKVTTNFVM  254 (254)
Q Consensus       211 ~~p~~d~~i~pl~~~~~-~~~~~~~y~~~~~gey~~~~~~~~~~~  254 (254)
                      ++|+.|++|+|++++++ +.+++++|++++++||+.+|+.++|.+
T Consensus       285 ~~p~~d~~i~pl~~~~~~~~~~~~~y~~~t~~e~~~~~~~~~~~~  329 (329)
T PLN02485        285 YETNFDAAVEPLDICKEKRTGGSQVFKRVVYGEHLVNKVLTNFAN  329 (329)
T ss_pred             ecCCCCceeecchhhcccccCCCCCCCcEeHHHHHHHHHHHhhcC
Confidence            99999999999999986 235789999999999999999999874

>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02216 protein SRG1 Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A Back     alignment and domain information
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query254
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 2e-14
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 3e-14
1w9y_A319 The Structure Of Acc Oxidase Length = 319 3e-14
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 4e-14
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 2e-12
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 6e-09
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 2e-06
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 2e-06
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure 
Iteration: 1

 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 10/164 (6%)
Query: 58  WPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAG--DAFWVLRIIGY 115
           WP  P ++     EY      L+ K+ + +++ LG  P   E    G  +    ++I  Y
Sbjct: 158 WPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYY 217
Query: 116 PGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVRNMSGEWISAPPIPGTFVC 175
           P         +PE  +G  AHTD   LT +  +  +  L++    G+W++A  +P + V 
Sbjct: 218 PKCP------QPELALGVEAHTDVSALTFILHNM-VPGLQLF-YEGKWVTAKCVPDSIVM 269
Query: 176 NIGDMLKIYSNGLYESTLHRVVNSSPKYRVCVAYFYETNFDAAV 219
           +IGD L+I SNG Y+S LHR + +  K R+  A F E   D  V
Sbjct: 270 HIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIV 313
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query254
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 4e-76
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 8e-73
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 4e-67
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 7e-62
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-44
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 5e-40
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
 Score =  232 bits (594), Expect = 4e-76
 Identities = 56/212 (26%), Positives = 84/212 (39%), Gaps = 12/212 (5%)

Query: 41  QEGMYGALGKTMEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEG 100
           ++   G   +     N WP   P F+  +    N    +  K++  IA  L      F+ 
Sbjct: 103 RDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKP 162

Query: 101 VRAGDAFWVLRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVRNMS 160
               D   VLR++ YP         K    +  GAH D   +TL+   +    LEV +  
Sbjct: 163 -TVQDGNSVLRLLHYPP------IPKDATGVRAGAHGDINTITLLLGAE-EGGLEVLDRD 214

Query: 161 GEWISAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSP----KYRVCVAYFYETNFD 216
           G+W+   P PG  V NIGDML+  +N +  ST+HRVVN  P      R    +F     D
Sbjct: 215 GQWLPINPPPGCLVINIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASD 274

Query: 217 AAVEPLDICKQRTGETKQFGRAVYGEHLVSKV 248
             ++ L  C       +        E L  ++
Sbjct: 275 YEIKTLQNCVTAENPDRYPESITADEFLQQRL 306
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query254
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 94.84
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 94.24
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 90.89
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 90.28
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 89.57
2iuw_A238 Alkylated repair protein ALKB homolog 3; oxidoredu 89.4
3s57_A204 Alpha-ketoglutarate-dependent dioxygenase ALKB HO; 84.39
3tht_A345 Alkylated DNA repair protein ALKB homolog 8; struc 83.85
3i3q_A211 Alpha-ketoglutarate-dependent dioxygenase ALKB; be 81.33
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
Probab=100.00  E-value=3.1e-54  Score=388.53  Aligned_cols=191  Identities=28%  Similarity=0.423  Sum_probs=174.3

Q ss_pred             CCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccccccCccceeeeeeccCCCCCCCCCCCCCcc
Q 025374           52 MEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGDAFWVLRIIGYPGLSGAKDQKKPENNI  131 (254)
Q Consensus        52 ~~~~n~wP~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~~~  131 (254)
                      ..++|+||+.+++||+++++|+++|.+++.+|+++++++||+++++|.+.+. ++.+.+|++||||++..     ++ .+
T Consensus       114 ~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~-~~~~~lr~~~Ypp~~~~-----~~-~~  186 (312)
T 3oox_A          114 HMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKPTVQ-DGNSVLRLLHYPPIPKD-----AT-GV  186 (312)
T ss_dssp             TSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTHHHHT-TCCCEEEEEEECCCSSC-----CC---
T ss_pred             ccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhc-CCcceeeeEecCCCCCC-----cC-Cc
Confidence            3467999999999999999999999999999999999999999999988774 45689999999999852     23 39


Q ss_pred             ccccccCCCCeEEEeecCCCCceeEEcCCCCeEecCCCCCcEEEechhHHHHhhcCCcccccccccCCC----CCceeee
Q 025374          132 GCGAHTDYGLLTLVNQDDDITALEVRNMSGEWISAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSS----PKYRVCV  207 (254)
Q Consensus       132 g~~~HtD~g~lTlL~qd~~~~GLqv~~~~g~W~~V~p~~g~lvVniGd~le~~TnG~~ka~~HRV~~~~----~~~R~Si  207 (254)
                      |+++|||+|+||||+|| .++||||++++|+|++|+|+||++|||+||+||+||||+|||+.|||+.+.    ..+|||+
T Consensus       187 g~~~HtD~g~lTlL~qd-~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~R~Si  265 (312)
T 3oox_A          187 RAGAHGDINTITLLLGA-EEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYST  265 (312)
T ss_dssp             CEEEECCCSSEEEEECC-TTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHTTTSSCCCCEEECCCCGGGTTSCEEEC
T ss_pred             CccceecCceEEEEeEc-CcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHhCCeecCCCceEeCCCccCCCCCEEEE
Confidence            99999999999999998 699999999999999999999999999999999999999999999998763    4579999


Q ss_pred             EeeeecCCCceEecCccccccCCCCCCCc-cccHHHHHHHHHHhh
Q 025374          208 AYFYETNFDAAVEPLDICKQRTGETKQFG-RAVYGEHLVSKVTTN  251 (254)
Q Consensus       208 a~F~~p~~d~~i~pl~~~~~~~~~~~~y~-~~~~gey~~~~~~~~  251 (254)
                      +||++|+.|++|+|+++|+++ ++|++|+ ++|++||+.+|++..
T Consensus       266 a~F~~P~~d~~i~pl~~~v~~-~~p~~y~~~~t~~eyl~~r~~~~  309 (312)
T 3oox_A          266 PFFLHFASDYEIKTLQNCVTA-ENPDRYPESITADEFLQQRLREI  309 (312)
T ss_dssp             CEEECCCTTCEECCCGGGCCS-SSCCSCSSCEEHHHHHHHHHHHH
T ss_pred             EEEecCCCCcEEecCccccCC-CCcccCCCCeeHHHHHHHHHHHh
Confidence            999999999999999999986 6899999 999999999999853
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10 Back     alignment and structure
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A* Back     alignment and structure
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A* Back     alignment and structure
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 254
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 1e-31
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 4e-31
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 1e-29
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 3e-21
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  116 bits (292), Expect = 1e-31
 Identities = 54/200 (27%), Positives = 86/200 (43%), Gaps = 12/200 (6%)

Query: 52  MEGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRAGD--AFWV 109
               + WP  P ++     EY      L+ K+ + +++ LG  P   E    G       
Sbjct: 151 KRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQ 210

Query: 110 LRIIGYPGLSGAKDQKKPENNIGCGAHTDYGLLTLVNQDDDITALEVRNMSGEWISAPPI 169
           ++I  YP         +PE  +G  AHTD   LT +  +            G+W++A  +
Sbjct: 211 MKINYYPK------CPQPELALGVEAHTDVSALTFILHNMV--PGLQLFYEGKWVTAKCV 262

Query: 170 PGTFVCNIGDMLKIYSNGLYESTLHRVVNSSPKYRVCVAYFYETNFDAAV-EPLDICKQR 228
           P + V +IGD L+I SNG Y+S LHR + +  K R+  A F E   D  V +PL      
Sbjct: 263 PDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMV-S 321

Query: 229 TGETKQFGRAVYGEHLVSKV 248
                +F    + +H+  K+
Sbjct: 322 VESPAKFPPRTFAQHIEHKL 341
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query254
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2fdia1200 Alkylated DNA repair protein AlkB {Escherichia col 93.26
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 92.15
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: 1-aminocyclopropane-1-carboxylate oxidase 1
species: Petunia hybrida [TaxId: 4102]

Probab=100.00  E-value=1.8e-51  Score=366.81  Aligned_cols=194  Identities=24%  Similarity=0.427  Sum_probs=172.9

Q ss_pred             CCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccccc--cCccceeeeeeccCCCCCCCCCCCCCc
Q 025374           53 EGCNQWPLNPPNFRALMEEYVNLCTDLSRKIMRGIALALGGSPFEFEGVRA--GDAFWVLRIIGYPGLSGAKDQKKPENN  130 (254)
Q Consensus        53 ~~~n~wP~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~~--~~~~~~lrl~~Yp~~~~~~~~~~~~~~  130 (254)
                      ...+.||+.+++||+++++|++.|.+++.+|+++++++||+++++|.+.+.  ....+.+|++|||+++.      ++..
T Consensus        97 ~~~~~~~~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lr~~~YP~~~~------~~~~  170 (307)
T d1w9ya1          97 SNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPK------PDLI  170 (307)
T ss_dssp             CGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEEEEECCCCSC------GGGG
T ss_pred             cCcccCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHhhhhccccccccceecCCCCCcc------cccc
Confidence            346789999999999999999999999999999999999999999887653  34467899999999984      4567


Q ss_pred             cccccccCCCCeEEEeecCCCCceeEEcCCCCeEecCCCCCcEEEechhHHHHhhcCCcccccccccCCCCCceeeeEee
Q 025374          131 IGCGAHTDYGLLTLVNQDDDITALEVRNMSGEWISAPPIPGTFVCNIGDMLKIYSNGLYESTLHRVVNSSPKYRVCVAYF  210 (254)
Q Consensus       131 ~g~~~HtD~g~lTlL~qd~~~~GLqv~~~~g~W~~V~p~~g~lvVniGd~le~~TnG~~ka~~HRV~~~~~~~R~Sia~F  210 (254)
                      .|+++|||+|+||+|+|++.++|||+.. +|+|++|+|.+|++|||+||+||+||||+||||.|||+.+++.+|||++||
T Consensus       171 ~g~~~HtD~~~lTlL~q~~~~ggl~~~~-~g~Wi~v~p~~~~~vVnvGD~l~~~Tng~~kSt~HRVv~~~~~~R~Si~~F  249 (307)
T d1w9ya1         171 KGLRAHTDAGGIILLFQDDKVSGLQLLK-DGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASF  249 (307)
T ss_dssp             SSCCCBCCSSSEEEEEESSSCCCEEEEE-TTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSSCCEEEEEE
T ss_pred             cccccccccceeEEeeccCCCCeEEEec-CCcEEEeccCCCeEEEEcchhhHHhhCCcccCcCceeecCCCCCcEEEEEE
Confidence            8999999999999999986789999984 899999999999999999999999999999999999999888899999999


Q ss_pred             eecCCCceEecCcccccc--CCCCCCCccccHHHHHHHHHHhhcC
Q 025374          211 YETNFDAAVEPLDICKQR--TGETKQFGRAVYGEHLVSKVTTNFV  253 (254)
Q Consensus       211 ~~p~~d~~i~pl~~~~~~--~~~~~~y~~~~~gey~~~~~~~~~~  253 (254)
                      ++|+.|++|+|+++|++.  .++|++|+|+|++||++.+++++|.
T Consensus       250 ~~p~~d~~i~p~~~~v~~~~~~~p~~y~~~t~~ey~~~~~~~~~~  294 (307)
T d1w9ya1         250 YNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQ  294 (307)
T ss_dssp             EECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCS
T ss_pred             eeCCCCCEEeCCHHHhcccCccCCCCCCCeeHHHHHHHHHhccCC
Confidence            999999999999999863  3578999999999999988887774
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure