Citrus Sinensis ID: 025392


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250---
MGFLAWQCASLTYGYAIHSHTIYSVTQIENIRCWFFQENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIISTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADNNLSSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRNMSDALSRIVQAEGWAGLYKGIVPSTVKAAPAGAVTFVAYEYASDWLESILT
cccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHc
cccHcccccccccHHcccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccccHHHHHHHHHHHcccHHHHcccHHHHHHHcHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
MGFLAWQCASltygyaihshTIYSVTQIENIRCWFFQENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILasqgepkvyptMRSAFVDIISTrgfrglyaglspTLVEIipyaglqfgtydtFKRWTmdwnrirssntsstgadnnlssFQLFVCGLAAGTCAKLVCHPLDVVKKRFqieglqrhpkygarvEHRAYRNMSDALSRIVQAEGWaglykgivpstvkaapagaVTFVAYEYASDWLESILT
MGFLAWQCASLTYGYAIHSHTIYSVTQIENIRCWFFQENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASqgepkvypTMRSAFVDIISTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSntsstgadnnLSSFQLFVCGLAAGTCAKLVCHPLDVVKKRfqieglqrhpkygarveHRAYRNMSDALSRIVQAEGWAGLYKGIVPSTVKAAPAGAVTFVAYEYASDWLESILT
MGFLAWQCASLTYGYAIHSHTIYSVTQIENIRCWFFQENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIISTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADNNLSSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRNMSDALSRIVQAEGWAGLYKGIVPSTVKAAPAGAVTFVAYEYASDWLESILT
**FLAWQCASLTYGYAIHSHTIYSVTQIENIRCWFFQENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIISTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIR***********NLSSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRNMSDALSRIVQAEGWAGLYKGIVPSTVKAAPAGAVTFVAYEYASDWLES***
MGFLAWQCASLTYGYAIHSHTIYSVTQIENIRCWF********SAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIISTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRI*************LSSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQ********VEHRAYRNMSDALSRIVQAEGWAGLYKGIVPSTVKAAPAGAVTFVAYEYASDWLESILT
MGFLAWQCASLTYGYAIHSHTIYSVTQIENIRCWFFQENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIISTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADNNLSSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRNMSDALSRIVQAEGWAGLYKGIVPSTVKAAPAGAVTFVAYEYASDWLESILT
MGFLAWQCASLTYGYAIHSHTIYSVTQIENIRCWFFQENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIISTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNR************NNLSSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRH********HRAYRNMSDALSRIVQAEGWAGLYKGIVPSTVKAAPAGAVTFVAYEYASDWLESILT
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooo
SSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGFLAWQCASLTYGYAIHSHTIYSVTQIENIRCWFFQENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIISTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADNNLSSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRNMSDALSRIVQAEGWAGLYKGIVPSTVKAAPAGAVTFVAYEYASDWLESILT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query253 2.2.26 [Sep-21-2011]
Q5IS35320 Mitochondrial thiamine py N/A no 0.723 0.571 0.38 8e-32
Q9HC21320 Mitochondrial thiamine py yes no 0.723 0.571 0.375 8e-32
Q29RM1318 Mitochondrial thiamine py yes no 0.723 0.575 0.376 3e-31
Q9DAM5318 Mitochondrial thiamine py no no 0.758 0.603 0.374 7e-31
Q5NVC1320 Mitochondrial thiamine py yes no 0.723 0.571 0.37 4e-30
O04619352 Mitochondrial adenine nuc no no 0.920 0.661 0.301 1e-27
A7ER02322 Mitochondrial thiamine py N/A no 0.731 0.574 0.342 2e-25
A6SL61322 Mitochondrial thiamine py N/A no 0.739 0.580 0.342 3e-25
Q7S2H8333 Mitochondrial thiamine py N/A no 0.822 0.624 0.354 3e-25
Q1E7P0319 Mitochondrial thiamine py N/A no 0.731 0.579 0.347 3e-25
>sp|Q5IS35|TPC_MACFA Mitochondrial thiamine pyrophosphate carrier OS=Macaca fascicularis GN=SLC25A19 PE=2 SV=1 Back     alignment and function desciption
 Score =  137 bits (345), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 76/200 (38%), Positives = 111/200 (55%), Gaps = 17/200 (8%)

Query: 47  LSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIISTRGFRGLYAGLS 106
           + +V G LA C AT+  +P D+LRT  A+QGEPKVY T+R A   +  + G +  Y GL+
Sbjct: 120 VHFVCGGLAACTATLTVHPVDVLRTRFAAQGEPKVYNTLRHAVGTMYRSEGPQVFYKGLA 179

Query: 107 PTLVEIIPYAGLQFGTYDTFK---RWTMDWNRIRSSNTSSTGADNNLSSFQLFVCGLAAG 163
           PTL+ I PYAGLQF  Y + K   +W M     ++ N             Q  +CG  AG
Sbjct: 180 PTLIAIFPYAGLQFSCYSSLKHLYKWAMPAEGKKNEN------------LQNLLCGSGAG 227

Query: 164 TCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRNMSDALSRIVQAEGWAGLYKGI 223
             +K + +PLD+ KKR Q+ G + H +  A  + R Y+ + D   +++Q EG  G +KG+
Sbjct: 228 VISKTLTYPLDLFKKRLQVGGFE-HAR-AAFGQVRRYKGLMDCAKQVLQKEGALGFFKGL 285

Query: 224 VPSTVKAAPAGAVTFVAYEY 243
            PS +KAA +    F  YE+
Sbjct: 286 SPSLLKAALSTGFMFFWYEF 305




Mitochondrial transporter mediating uptake of thiamine pyrophosphate (ThPP) into mitochondria.
Macaca fascicularis (taxid: 9541)
>sp|Q9HC21|TPC_HUMAN Mitochondrial thiamine pyrophosphate carrier OS=Homo sapiens GN=SLC25A19 PE=1 SV=1 Back     alignment and function description
>sp|Q29RM1|TPC_BOVIN Mitochondrial thiamine pyrophosphate carrier OS=Bos taurus GN=SLC25A19 PE=2 SV=1 Back     alignment and function description
>sp|Q9DAM5|TPC_MOUSE Mitochondrial thiamine pyrophosphate carrier OS=Mus musculus GN=Slc25a19 PE=2 SV=1 Back     alignment and function description
>sp|Q5NVC1|TPC_PONAB Mitochondrial thiamine pyrophosphate carrier OS=Pongo abelii GN=SLC25A19 PE=2 SV=1 Back     alignment and function description
>sp|O04619|ADNT1_ARATH Mitochondrial adenine nucleotide transporter ADNT1 OS=Arabidopsis thaliana GN=ADNT1 PE=2 SV=1 Back     alignment and function description
>sp|A7ER02|TPC1_SCLS1 Mitochondrial thiamine pyrophosphate carrier 1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=tpc1 PE=3 SV=1 Back     alignment and function description
>sp|A6SL61|TPC1_BOTFB Mitochondrial thiamine pyrophosphate carrier 1 OS=Botryotinia fuckeliana (strain B05.10) GN=tpc1 PE=3 SV=1 Back     alignment and function description
>sp|Q7S2H8|TPC1_NEUCR Mitochondrial thiamine pyrophosphate carrier 1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=tpc-1 PE=3 SV=1 Back     alignment and function description
>sp|Q1E7P0|TPC1_COCIM Mitochondrial thiamine pyrophosphate carrier 1 OS=Coccidioides immitis (strain RS) GN=TPC1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query253
224107339339 predicted protein [Populus trichocarpa] 0.723 0.539 0.888 1e-108
224123216329 predicted protein [Populus trichocarpa] 0.715 0.550 0.873 1e-108
255551717331 Mitochondrial deoxynucleotide carrier, p 0.707 0.540 0.893 1e-107
356521873331 PREDICTED: mitochondrial thiamine pyroph 0.826 0.631 0.863 1e-105
356529708328 PREDICTED: mitochondrial thiamine pyroph 0.837 0.646 0.847 1e-105
356556120328 PREDICTED: mitochondrial thiamine pyroph 0.837 0.646 0.842 1e-103
363814342327 uncharacterized protein LOC100805353 [Gl 0.826 0.639 0.854 1e-102
15239754339 Mitochondrial substrate carrier family p 0.715 0.533 0.817 1e-101
225432282330 PREDICTED: mitochondrial thiamine pyroph 0.849 0.651 0.819 1e-101
297795621338 mitochondrial substrate carrier family p 0.699 0.523 0.817 1e-100
>gi|224107339|ref|XP_002314452.1| predicted protein [Populus trichocarpa] gi|222863492|gb|EEF00623.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 192/216 (88%), Positives = 201/216 (93%)

Query: 38  ENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIISTRG 97
           E+HI LS YLSY SGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDI+ TRG
Sbjct: 124 EDHIQLSPYLSYASGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIVRTRG 183

Query: 98  FRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADNNLSSFQLFV 157
           FRGLYAGLSPTLVEI+PYAGLQFGTYDTFKRWTM WN  +SS+TSS   D+NLSSFQLF+
Sbjct: 184 FRGLYAGLSPTLVEIVPYAGLQFGTYDTFKRWTMAWNHHKSSSTSSISTDDNLSSFQLFI 243

Query: 158 CGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRNMSDALSRIVQAEGWA 217
           CGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYG RVEHRAYRNM DAL RI+Q EGWA
Sbjct: 244 CGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYGGRVEHRAYRNMFDALRRILQTEGWA 303

Query: 218 GLYKGIVPSTVKAAPAGAVTFVAYEYASDWLESILT 253
           GLYKGIVPSTVKAAPAGAVTFVAYE+ SDWLESILT
Sbjct: 304 GLYKGIVPSTVKAAPAGAVTFVAYEFTSDWLESILT 339




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224123216|ref|XP_002330367.1| predicted protein [Populus trichocarpa] gi|222871571|gb|EEF08702.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255551717|ref|XP_002516904.1| Mitochondrial deoxynucleotide carrier, putative [Ricinus communis] gi|223543992|gb|EEF45518.1| Mitochondrial deoxynucleotide carrier, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356521873|ref|XP_003529575.1| PREDICTED: mitochondrial thiamine pyrophosphate carrier-like [Glycine max] Back     alignment and taxonomy information
>gi|356529708|ref|XP_003533430.1| PREDICTED: mitochondrial thiamine pyrophosphate carrier-like [Glycine max] Back     alignment and taxonomy information
>gi|356556120|ref|XP_003546375.1| PREDICTED: mitochondrial thiamine pyrophosphate carrier-like [Glycine max] Back     alignment and taxonomy information
>gi|363814342|ref|NP_001242812.1| uncharacterized protein LOC100805353 [Glycine max] gi|255637169|gb|ACU18915.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|15239754|ref|NP_199708.1| Mitochondrial substrate carrier family protein [Arabidopsis thaliana] gi|10177187|dbj|BAB10321.1| mitochondrial carrier protein-like [Arabidopsis thaliana] gi|26449838|dbj|BAC42042.1| putative mitochondrial carrier protein [Arabidopsis thaliana] gi|30017309|gb|AAP12888.1| At5g48970 [Arabidopsis thaliana] gi|332008368|gb|AED95751.1| Mitochondrial substrate carrier family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|225432282|ref|XP_002272682.1| PREDICTED: mitochondrial thiamine pyrophosphate carrier [Vitis vinifera] gi|297736865|emb|CBI26066.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297795621|ref|XP_002865695.1| mitochondrial substrate carrier family protein [Arabidopsis lyrata subsp. lyrata] gi|297311530|gb|EFH41954.1| mitochondrial substrate carrier family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query253
TAIR|locus:2154374339 AT5G48970 [Arabidopsis thalian 0.845 0.631 0.817 2.7e-93
TAIR|locus:2089453335 AT3G21390 "AT3G21390" [Arabido 0.853 0.644 0.788 1.7e-91
UNIPROTKB|E1C309309 SLC25A19 "Uncharacterized prot 0.881 0.721 0.355 7.7e-32
UNIPROTKB|Q29RM1318 SLC25A19 "Mitochondrial thiami 0.719 0.572 0.379 6.9e-31
RGD|1359554318 Slc25a19 "solute carrier famil 0.885 0.704 0.365 8.8e-31
UNIPROTKB|Q9HC21320 SLC25A19 "Mitochondrial thiami 0.727 0.575 0.389 1.1e-30
MGI|MGI:1914533318 Slc25a19 "solute carrier famil 0.885 0.704 0.360 1.8e-30
UNIPROTKB|E2RFK6318 SLC25A19 "Uncharacterized prot 0.723 0.575 0.396 4.9e-30
UNIPROTKB|Q6I583355 OSJNBa0009C07.13 "Putative per 0.897 0.639 0.331 1e-29
UNIPROTKB|C8C419318 SLC25A19 "Solute carrier famil 0.719 0.572 0.379 1e-29
TAIR|locus:2154374 AT5G48970 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
 Identities = 175/214 (81%), Positives = 190/214 (88%)

Query:    38 ENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIISTRG 97
             E+HI+LS YLS+VSGALAGCAAT+GSYPFDLLRTILASQGEPKVYPTMRSAFVDII +RG
Sbjct:   124 EDHIHLSPYLSFVSGALAGCAATLGSYPFDLLRTILASQGEPKVYPTMRSAFVDIIQSRG 183

Query:    98 FRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADNNLSSFQLFV 157
              RGLY GL+PTLVEI+PYAGLQFGTYD FKRW MDWNR + S+      D NLSSFQLF+
Sbjct:   184 IRGLYNGLTPTLVEIVPYAGLQFGTYDMFKRWMMDWNRYKLSSKIPINVDTNLSSFQLFI 243

Query:   158 CGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRNMSDALSRIVQAEGWA 217
             CGL AGT AKLVCHPLDVVKKRFQIEGLQRHP+YGARVE RAYRNM D L +I+ +EGW 
Sbjct:   244 CGLGAGTSAKLVCHPLDVVKKRFQIEGLQRHPRYGARVERRAYRNMLDGLRQIMISEGWH 303

Query:   218 GLYKGIVPSTVKAAPAGAVTFVAYEYASDWLESI 251
             GLYKGIVPSTVKAAPAGAVTFVAYE+ SDWLESI
Sbjct:   304 GLYKGIVPSTVKAAPAGAVTFVAYEFTSDWLESI 337


GO:0005739 "mitochondrion" evidence=ISM;IDA
GO:0005743 "mitochondrial inner membrane" evidence=ISS
GO:0006810 "transport" evidence=ISS
GO:0006839 "mitochondrial transport" evidence=ISS
GO:0030974 "thiamine pyrophosphate transport" evidence=IGI
GO:0090422 "thiamine pyrophosphate transporter activity" evidence=IGI
TAIR|locus:2089453 AT3G21390 "AT3G21390" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|E1C309 SLC25A19 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q29RM1 SLC25A19 "Mitochondrial thiamine pyrophosphate carrier" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|1359554 Slc25a19 "solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q9HC21 SLC25A19 "Mitochondrial thiamine pyrophosphate carrier" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1914533 Slc25a19 "solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E2RFK6 SLC25A19 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q6I583 OSJNBa0009C07.13 "Putative peroxisomal Ca-dependent solute carrier" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|C8C419 SLC25A19 "Solute carrier family 25 member 19" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
eugene3.00100290
hypothetical protein (339 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query253
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 4e-24
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 3e-22
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 8e-15
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 4e-04
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 92.3 bits (230), Expect = 4e-24
 Identities = 36/101 (35%), Positives = 49/101 (48%), Gaps = 9/101 (8%)

Query: 148 NNLSSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRNMSDAL 207
           + LS     + G  AG  A  V +PLDVVK R Q           A    R Y+ + D  
Sbjct: 1   SPLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQS---------SAAGGSRKYKGILDCF 51

Query: 208 SRIVQAEGWAGLYKGIVPSTVKAAPAGAVTFVAYEYASDWL 248
            +I + EG  GLYKG++P+ ++ APA A+ F  YE     L
Sbjct: 52  KKIYKEEGIRGLYKGLLPNLLRVAPAAAIYFGTYETLKKLL 92


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 253
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0764 299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0752 320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0757 319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0760 302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0762 311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.98
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.98
KOG0770 353 consensus Predicted mitochondrial carrier protein 99.97
KOG0765333 consensus Predicted mitochondrial carrier protein 99.97
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.97
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.97
KOG0761 361 consensus Mitochondrial carrier protein CGI-69 [En 99.97
KOG0769308 consensus Predicted mitochondrial carrier protein 99.97
KOG0751 694 consensus Mitochondrial aspartate/glutamate carrie 99.97
KOG0767 333 consensus Mitochondrial phosphate carrier protein 99.96
KOG0769 308 consensus Predicted mitochondrial carrier protein 99.96
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.96
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.95
KOG0036463 consensus Predicted mitochondrial carrier protein 99.95
KOG0766 297 consensus Predicted mitochondrial carrier protein 99.95
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.94
KOG0768 323 consensus Mitochondrial carrier protein PET8 [Ener 99.94
KOG0765333 consensus Predicted mitochondrial carrier protein 99.94
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.93
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.93
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.92
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.91
KOG1519297 consensus Predicted mitochondrial carrier protein 99.81
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.77
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.76
KOG2745321 consensus Mitochondrial carrier protein [General f 99.75
KOG2745321 consensus Mitochondrial carrier protein [General f 99.68
KOG1519297 consensus Predicted mitochondrial carrier protein 99.56
KOG2954427 consensus Mitochondrial carrier protein [General f 99.49
KOG2954427 consensus Mitochondrial carrier protein [General f 98.73
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=1.1e-44  Score=298.79  Aligned_cols=228  Identities=39%  Similarity=0.643  Sum_probs=202.6

Q ss_pred             cccccchhhhhhcccchhHHHHHHHHHHHhh-hhcCCCCchhHHHHHHHHHHHHHHHHhhcchHHHHHHHHhcCCCCcCC
Q 025392            5 AWQCASLTYGYAIHSHTIYSVTQIENIRCWF-FQENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYP   83 (253)
Q Consensus         5 ~~~g~~~~~~~~~~~~~l~~~~~~~~~k~~~-~~~~~~~~~~~~~~~ag~~a~~~~~~v~~Pld~vk~r~Q~~~~~~~~~   83 (253)
                      .|||..+++...++..++.+.+ ||.+|..+ ..++....+...+++||++|++++.++++|+|++|+|+-++.+...|+
T Consensus        86 ~wkGn~~~~~r~~pY~avqf~a-ye~~k~~~~~~~~~~~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~~~~y~  164 (320)
T KOG0752|consen   86 FWKGNGPAQIRIIPYGAVQFSA-YEQYKKLVLGVDPNGSLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGELKVYR  164 (320)
T ss_pred             hhcCcccceeeeeecchhhhhH-HHHhhhhhhccCcccccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeecccccCC
Confidence            5999999999999999999998 99999843 333334788999999999999999999999999999999998767899


Q ss_pred             cHHHHHHHHHhhcChhhhcccchHHHHHHHhhhhHHHHHHHHHHHH-hhhhhhcccCCCCCCCCCCCcchHHHHHHHhhh
Q 025392           84 TMRSAFVDIISTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRW-TMDWNRIRSSNTSSTGADNNLSSFQLFVCGLAA  162 (253)
Q Consensus        84 ~~~~~~~~i~~~~G~~gly~G~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a  162 (253)
                      ++.+++++|+++||++|||||+.|.+++.+|+.++.|.+||.+|++ +...           ......+....+++|++|
T Consensus       165 ~l~~a~~~I~~~eGi~gfYrGl~ptllgi~Pyag~~F~~Yd~lk~~~~~~~-----------~~~~~~~~~~~l~~GalA  233 (320)
T KOG0752|consen  165 GLLHAFKTIYREEGIRGFYRGLGPTLLGIAPYAGINFFAYDTLKKWQYLKS-----------SGNKELSNFERLLCGALA  233 (320)
T ss_pred             cHHHHHHHHHHhcchhhhhcCcchhhheehhhhhhHHHHHHHHHHhhcccc-----------cccchhhhHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999996 2222           112456788999999999


Q ss_pred             hhhhhhhcccHHHHHHHHHhhcccCCCCCCccccccccCcHHHHHHHHHHhhCccccccchhhhhhccccchhhHHHHHH
Q 025392          163 GTCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRNMSDALSRIVQAEGWAGLYKGIVPSTVKAAPAGAVTFVAYE  242 (253)
Q Consensus       163 g~~~~~~~~P~d~vk~r~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~l~~~~~~~~i~~~~y~  242 (253)
                      |+++.++++|||+||.|||+........      ..++++++||+++|+++||+.|||||+.|++++.+|..++.|.+||
T Consensus       234 G~~aqti~yPlD~vRrrmQ~~~~~~~~~------~~~~~~~~~~~~~i~~~EG~~gLYkGl~p~~lK~~P~~ai~F~~Ye  307 (320)
T KOG0752|consen  234 GAVAQTITYPLDTVRRRMQLGGLKYFGG------GFRYKGVLDAFRQIVKTEGVKGLYKGLSPNLLKVVPSVAISFTTYE  307 (320)
T ss_pred             HHHHhhhcccHHHHHHHHhccCcccccc------ccccccHHHHHHHHHHHhhhhhhhccccHHHHHhcccceeeeehHH
Confidence            9999999999999999999998541111      2346899999999999999999999999999999999999999999


Q ss_pred             HHHHHHhh
Q 025392          243 YASDWLES  250 (253)
Q Consensus       243 ~~~~~l~~  250 (253)
                      .+|..+..
T Consensus       308 ~~k~~l~~  315 (320)
T KOG0752|consen  308 ILKDLLRL  315 (320)
T ss_pred             HHHHHhhc
Confidence            99987754



>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query253
2lck_A 303 Structure Of The Mitochondrial Uncoupling Protein 2 1e-11
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 7e-08
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Iteration: 1

Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/211 (25%), Positives = 87/211 (41%), Gaps = 30/211 (14%) Query: 47 LSYVSGALAGCAATVGSYPFDLLRTILASQGEPK---------VYPTMRSAFVDIISTRG 97 + ++ A C A + ++P D + L QGE + Y + + ++ T G Sbjct: 3 VKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEG 62 Query: 98 FRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADNNLSSFQLFV 157 R LY GL L + +A ++ G YD+ K++ + + G + L + Sbjct: 63 PRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFY-------TKGSEHAGIGSRL------L 109 Query: 158 CGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRNMSDALSRIVQAEGWA 217 G G A V P DVVK RFQ + + G R Y++ +A I + EG Sbjct: 110 AGSTTGALAVAVAQPTDVVKVRFQAQA-----RAGG---GRRYQSTVEAYKTIAREEGIR 161 Query: 218 GLYKGIVPSTVKAAPAGAVTFVAYEYASDWL 248 GL+KG P+ + A V Y+ D L Sbjct: 162 GLWKGTSPNVARNAIVNCAELVTYDLIKDTL 192
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query253
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 2e-60
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-34
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 4e-18
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 4e-43
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 1e-35
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 6e-10
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  191 bits (487), Expect = 2e-60
 Identities = 49/228 (21%), Positives = 81/228 (35%), Gaps = 30/228 (13%)

Query: 29  ENIRCWFF----QENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQ----GEPK 80
           +  +  F     +          +  SG  AG  +    YP D  RT LA+        +
Sbjct: 92  DKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQR 151

Query: 81  VYPTMRSAFVDIISTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSN 140
            +  + +    I  + G RGLY G + ++  II Y    FG YDT K    D        
Sbjct: 152 EFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPD-------- 203

Query: 141 TSSTGADNNLSSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAY 200
                   N+     ++        A LV +P D V++R  ++        G +     Y
Sbjct: 204 ------PKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQS-------GRKGADIMY 250

Query: 201 RNMSDALSRIVQAEGWAGLYKGIVPSTVKAAPAGAVTFVAYEYASDWL 248
               D   +I + EG    +KG   + ++    GA   V Y+    ++
Sbjct: 251 TGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDEIKKFV 297


>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query253
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 100.0
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
Probab=100.00  E-value=7.9e-44  Score=300.41  Aligned_cols=221  Identities=20%  Similarity=0.314  Sum_probs=199.0

Q ss_pred             ccccccchhhhhhcccchhHHHHHHHHHHHhhhhcCCCCchhHHHHHHHHHHHHHHHHhhcchHHHHHHHHhcCC---CC
Q 025392            4 LAWQCASLTYGYAIHSHTIYSVTQIENIRCWFFQENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGE---PK   80 (253)
Q Consensus         4 ~~~~g~~~~~~~~~~~~~l~~~~~~~~~k~~~~~~~~~~~~~~~~~~ag~~a~~~~~~v~~Pld~vk~r~Q~~~~---~~   80 (253)
                      ..|||..+.+...++..++++.+ ||.+|+.+.+..+ ..+....+++|++|++++.++++|+|+||+|+|++..   ..
T Consensus        65 glyrG~~~~l~~~~~~~~i~f~~-ye~~k~~~~~~~~-~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~  142 (303)
T 2lck_A           65 SLYNGLVAGLQRQMSFASVRIGL-YDSVKQFYTKGSE-HAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGR  142 (303)
T ss_dssp             HHHSSHHHHHHHHHHHHHHTTTH-HHHHHHHHSCCCS-SCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSS
T ss_pred             HHHcCCHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCc-CCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCC
Confidence            36999999999999999999888 8999998876422 4677889999999999999999999999999999853   34


Q ss_pred             cCCcHHHHHHHHHhhcChhhhcccchHHHHHHHhhhhHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCCcchHHHHHHHh
Q 025392           81 VYPTMRSAFVDIISTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADNNLSSFQLFVCGL  160 (253)
Q Consensus        81 ~~~~~~~~~~~i~~~~G~~gly~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  160 (253)
                      .|.+..+++++|+++||++|||||+.+.+++.+++.+++|.+||.+|+.+.+..            ....+....+++|+
T Consensus       143 ~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~------------~~~~~~~~~~~~g~  210 (303)
T 2lck_A          143 RYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKAN------------LMTDDLPCHFTSAF  210 (303)
T ss_dssp             SCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTT------------SCCSCHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcc------------CCCCchHHHHHHHH
Confidence            789999999999999999999999999999999999999999999999876541            12345678899999


Q ss_pred             hhhhhhhhhcccHHHHHHHHHhhcccCCCCCCccccccccCcHHHHHHHHHHhhCccccccchhhhhhccccchhhHHHH
Q 025392          161 AAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRNMSDALSRIVQAEGWAGLYKGIVPSTVKAAPAGAVTFVA  240 (253)
Q Consensus       161 ~ag~~~~~~~~P~d~vk~r~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~l~~~~~~~~i~~~~  240 (253)
                      +||++++++++|+|+||+|+|.+.            ...|.++++++++|+++||++|||||+.++++|.+|.++++|.+
T Consensus       211 ~ag~~~~~~~~P~dvvktrlq~~~------------~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~  278 (303)
T 2lck_A          211 GAGFCTTVIASPVDVVKTRYMNSA------------LGQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVT  278 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCC------------SSSCCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCHHHHHHHHHHhcc------------ccccCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHH
Confidence            999999999999999999999986            23589999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhh
Q 025392          241 YEYASDWLES  250 (253)
Q Consensus       241 y~~~~~~l~~  250 (253)
                      ||.+|+.+.+
T Consensus       279 ye~~k~~l~~  288 (303)
T 2lck_A          279 YEQLKRALMA  288 (303)
T ss_dssp             HHHHHSCCCC
T ss_pred             HHHHHHHHHH
Confidence            9999987654



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 253
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 4e-17
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 5e-12
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 8e-09
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 76.7 bits (187), Expect = 4e-17
 Identities = 47/219 (21%), Positives = 77/219 (35%), Gaps = 26/219 (11%)

Query: 29  ENIRCWFFQENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEP----KVYPT 84
           +       +          +  SG  AG  +    YP D  RT LA+        + +  
Sbjct: 95  QIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTG 154

Query: 85  MRSAFVDIISTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSST 144
           + +    I  + G RGLY G + ++  II Y    FG YDT K    D   +    +   
Sbjct: 155 LGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVS--- 211

Query: 145 GADNNLSSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRNMS 204
                      ++        A LV +P D V++R  ++        G +     Y    
Sbjct: 212 -----------WMIAQTVTAVAGLVSYPFDTVRRRMMMQS-------GRKGADIMYTGTV 253

Query: 205 DALSRIVQAEGWAGLYKGIVPSTVKAAPAGAVTFVAYEY 243
           D   +I + EG    +KG   + ++    GA   V Y+ 
Sbjct: 254 DCWRKIAKDEGPKAFFKGAWSNVLRGMG-GAFVLVLYDE 291


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query253
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=4.6e-37  Score=255.51  Aligned_cols=218  Identities=22%  Similarity=0.332  Sum_probs=189.3

Q ss_pred             ccccccchhhhhhcccchhHHHHHHHHHHHhhhhcCCC----CchhHHHHHHHHHHHHHHHHhhcchHHHHHHHHhcCC-
Q 025392            4 LAWQCASLTYGYAIHSHTIYSVTQIENIRCWFFQENHI----NLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGE-   78 (253)
Q Consensus         4 ~~~~g~~~~~~~~~~~~~l~~~~~~~~~k~~~~~~~~~----~~~~~~~~~ag~~a~~~~~~v~~Pld~vk~r~Q~~~~-   78 (253)
                      ..|||..+.+....+...+++.. ||.++..+.+....    .......+++|++|++++.++.+|+|++|+|+|.+.. 
T Consensus        67 ~ly~G~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~  145 (292)
T d1okca_          67 SFWRGNLANVIRYFPTQALNFAF-KDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGK  145 (292)
T ss_dssp             GGGTTTHHHHHHHHHHHHHHHHH-HHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCS
T ss_pred             hhhhccchhhhhhhcccchhHHH-HHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccc
Confidence            35999999999999999999888 89999988763222    2334567889999999999999999999999999854 


Q ss_pred             ---CCcCCcHHHHHHHHHhhcChhhhcccchHHHHHHHhhhhHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCCcchHHH
Q 025392           79 ---PKVYPTMRSAFVDIISTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADNNLSSFQL  155 (253)
Q Consensus        79 ---~~~~~~~~~~~~~i~~~~G~~gly~G~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (253)
                         ...+.+..+.+++++++||+++||+|+.+.+++.+++.+++|..||.+|+.+.+.              ........
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~--------------~~~~~~~~  211 (292)
T d1okca_         146 GAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP--------------KNVHIIVS  211 (292)
T ss_dssp             STTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG--------------GCSCHHHH
T ss_pred             cccccccccHHHHHHHhhhccchhhhhccccccccceehHhhhhhhhccchhhhcccc--------------cccchHHH
Confidence               3467899999999999999999999999999999999999999999999877554              23567788


Q ss_pred             HHHHhhhhhhhhhhcccHHHHHHHHHhhcccCCCCCCccccccccCcHHHHHHHHHHhhCccccccchhhhhhccccchh
Q 025392          156 FVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPKYGARVEHRAYRNMSDALSRIVQAEGWAGLYKGIVPSTVKAAPAGA  235 (253)
Q Consensus       156 ~~~g~~ag~~~~~~~~P~d~vk~r~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~l~~~~~~~~  235 (253)
                      ++++++++.+++++++|+|+||+|+|.+....       .....|.++++++++++++||++|||||+.++++|.++ .+
T Consensus       212 ~~~~~~~~~~a~~~t~P~dvvktR~q~~~~~~-------~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~-~~  283 (292)
T d1okca_         212 WMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRK-------GADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMG-GA  283 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC-------GGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHH-HH
T ss_pred             HHHHHHHHHHHhhccccHHHHHHHHHhcCCCC-------CCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHH-HH
Confidence            99999999999999999999999999987321       12446899999999999999999999999999999765 68


Q ss_pred             hHHHHHHHH
Q 025392          236 VTFVAYEYA  244 (253)
Q Consensus       236 i~~~~y~~~  244 (253)
                      +.|.+||.+
T Consensus       284 i~~~~ye~l  292 (292)
T d1okca_         284 FVLVLYDEI  292 (292)
T ss_dssp             HHHHHHHTC
T ss_pred             hhhhHhhcC
Confidence            999999963



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure