Citrus Sinensis ID: 025399


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250---
MLQGMDMAIAKLNSGGWVHIFPEGGRSRDGGKTVGSPKRGVGRLILDADNVPMVVPFVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQVDRLALEQPSAECVADILHMVDQESLGLQNHLLNEDYSLAQEALVQSKLDITPTQERSFFRMGLSYGDAFASRMRGYMDPTELMGFAARGLFMNGRTTDIAAIVRERGPLRAWKQYMEANLLGKWNLLM
cHHHHHHHHHHHHcccEEEEEEccccccccccccccccHHHHHHHHHcccccEEEEEEEEcccccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHcccccccccccccccccccccccHHccccccccHHHHHHHHHHHHHHcccHHHHHHHHHccccHHHHHHHHHHcccccccccc
cHHHHHHHHHHHHcccEEEEcccccEEccccccccEEEccEEEEEEccccccEEEEEEEcccHHcccccccccccccEEEEEEcccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHccccccccccccccccccHccccccccccccccccccccccHHHHccccHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHccc
MLQGMDMAIAKLnsggwvhifpeggrsrdggktvgspkrgvgrlildadnvpmvvpfvhtgmqevmpigatfprigKTVTVLigdpiefddlvDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQVDRLALEQPSAECVADILHMVDQeslglqnhllneDYSLAQEALVQSklditptqerSFFRMGLSYGDAFAsrmrgymdptelMGFAArglfmngrtTDIAAIVRERGPLRAWKQYMEANLLGKWNLLM
MLQGMDMAIAKLNSGGWVHIFpeggrsrdggktvgspKRGVGRLILDADNVPMVVPFVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKylsrgklydavASRIGHRLKKLKLQVDRLALEQPSAECVADILHMVDQESLGLQNHLLNEDYSLAQEALVQSKLDITPTQERSFFRMGLSYGDAFASRMRGYMDPTELMGFAARGLFMNGRTTDIAAIVRERGPLRAWKQYMEAnllgkwnllm
MLQGMDMAIAKLNSGGWVHIFPEGGRSRDGGKTVGSPKRGVGRLILDADNVPMVVPFVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQVDRLALEQPSAECVADILHMVDQESLGLQNHLLNEDYSLAQEALVQSKLDITPTQERSFFRMGLSYGDAFASRMRGYMDPTELMGFAARGLFMNGRTTDIAAIVRERGPLRAWKQYMEANLLGKWNLLM
********IAKLNSGGWVHIFP*****************GVGRLILDADNVPMVVPFVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQVDRLALEQPSAECVADILHMVDQESLGLQNHLLNEDYSLAQEALVQSKLDITPTQERSFFRMGLSYGDAFASRMRGYMDPTELMGFAARGLFMNGRTTDIAAIVRERGPLRAWKQYMEANLLGKWNL**
MLQGMDMAIAKLNSGGWVHIFPEGGRSRDGGKTVGSPKRGVGRLILDADNVPMVVPFVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKL**********************************************************************************ELMGFAARGLFMN***************LRAWKQYMEANLLGKWNLL*
MLQGMDMAIAKLNSGGWVHIFPEGGRSRDGGKTVGSPKRGVGRLILDADNVPMVVPFVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQVDRLALEQPSAECVADILHMVDQESLGLQNHLLNEDYSLAQEALVQSKLDITPTQERSFFRMGLSYGDAFASRMRGYMDPTELMGFAARGLFMNGRTTDIAAIVRERGPLRAWKQYMEANLLGKWNLLM
MLQGMDMAIAKLNSGGWVHIFPEGGRSRDGGKTVGSPKRGVGRLILDADNVPMVVPFVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQVDRLALEQPSAECVADILHMVDQESLGLQNHL*****************************MGLSYGDAFASRMRGYMDPTELMGFAARGLFMNGR*******VRERGPLRAWKQYMEANLLGKWNLL*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLQGMDMAIAKLNSGGWVHIFPEGGRSRDGGKTVGSPKRGVGRLILDADNVPMVVPFVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQVDRLALEQPSAECVADILHMVDQESLGLQNHLLNEDYSLAQEALVQSKLDITPTQERSFFRMGLSYGDAFASRMRGYMDPTELMGFAARGLFMNGRTTDIAAIVRERGPLRAWKQYMEANLLGKWNLLM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query253 2.2.26 [Sep-21-2011]
Q6IV77262 Tafazzin OS=Macaca mulatt yes no 0.490 0.473 0.354 3e-15
Q6IV78262 Tafazzin OS=Saimiri sciur N/A no 0.490 0.473 0.354 3e-15
Q6IV76262 Tafazzin OS=Erythrocebus N/A no 0.490 0.473 0.354 3e-15
Q6IV83292 Tafazzin OS=Gorilla goril N/A no 0.490 0.424 0.354 5e-15
Q16635292 Tafazzin OS=Homo sapiens no no 0.490 0.424 0.354 8e-15
Q6IV84292 Tafazzin OS=Pan troglodyt yes no 0.490 0.424 0.354 8e-15
Q6IV82292 Tafazzin OS=Pongo pygmaeu N/A no 0.490 0.424 0.346 2e-14
Q9V6G5378 Tafazzin homolog OS=Droso no no 0.501 0.335 0.261 2e-10
Q54DX7285 Putative lysophosphatidyl yes no 0.517 0.459 0.298 5e-10
Q9ZV87284 N-acylphosphatidylethanol no no 0.343 0.306 0.340 3e-08
>sp|Q6IV77|TAZ_MACMU Tafazzin OS=Macaca mulatta GN=TAZ PE=2 SV=1 Back     alignment and function desciption
 Score = 82.4 bits (202), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 69/127 (54%), Gaps = 3/127 (2%)

Query: 3   QGMDMAIAKLNSGGWVHIFPEGGRSRDGGKTVGSPKRGVGRLILDADNVPMVVPFVHTGM 62
           +GMD  + KLN G WVHIFPEG    +        K G+GRLI +    P+++P  H GM
Sbjct: 130 KGMDFILEKLNHGDWVHIFPEG--KVNMSSEFLRFKWGIGRLIAECHLNPIILPLWHVGM 187

Query: 63  QEVMPIGAT-FPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKL 121
            +V+P     FPR G+ +TVLIG P     +++  + +  S  ++  A+   I    ++L
Sbjct: 188 NDVLPNSPPYFPRFGQKITVLIGKPFSALPILERLRAENKSAVEMRKALTDFIQEEFQRL 247

Query: 122 KLQVDRL 128
           K Q ++L
Sbjct: 248 KTQAEQL 254




Some isoforms may be involved in cardiolipin metabolism.
Macaca mulatta (taxid: 9544)
>sp|Q6IV78|TAZ_SAISC Tafazzin OS=Saimiri sciureus GN=TAZ PE=3 SV=1 Back     alignment and function description
>sp|Q6IV76|TAZ_ERYPA Tafazzin OS=Erythrocebus patas GN=TAZ PE=2 SV=1 Back     alignment and function description
>sp|Q6IV83|TAZ_GORGO Tafazzin OS=Gorilla gorilla gorilla GN=TAZ PE=3 SV=1 Back     alignment and function description
>sp|Q16635|TAZ_HUMAN Tafazzin OS=Homo sapiens GN=TAZ PE=1 SV=1 Back     alignment and function description
>sp|Q6IV84|TAZ_PANTR Tafazzin OS=Pan troglodytes GN=TAZ PE=3 SV=1 Back     alignment and function description
>sp|Q6IV82|TAZ_PONPY Tafazzin OS=Pongo pygmaeus GN=TAZ PE=3 SV=1 Back     alignment and function description
>sp|Q9V6G5|TAZ_DROME Tafazzin homolog OS=Drosophila melanogaster GN=Taz PE=2 SV=2 Back     alignment and function description
>sp|Q54DX7|TAZ1_DICDI Putative lysophosphatidylcholine acyltransferase OS=Dictyostelium discoideum GN=taz PE=3 SV=1 Back     alignment and function description
>sp|Q9ZV87|NAPES_ARATH N-acylphosphatidylethanolamine synthase OS=Arabidopsis thaliana GN=At1g78690 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query253
359487638 459 PREDICTED: uncharacterized protein LOC10 0.980 0.540 0.625 4e-89
147786913 459 hypothetical protein VITISV_026039 [Viti 0.980 0.540 0.618 1e-88
224123600 462 predicted protein [Populus trichocarpa] 0.948 0.519 0.613 1e-84
255542736 461 taz protein, putative [Ricinus communis] 0.964 0.529 0.592 1e-75
449435629 479 PREDICTED: uncharacterized protein LOC10 0.964 0.509 0.555 4e-74
356505825 468 PREDICTED: tafazzin-like [Glycine max] 0.964 0.521 0.541 2e-73
356572982 467 PREDICTED: uncharacterized protein LOC10 0.980 0.531 0.534 3e-72
357511839 463 Tafazzin [Medicago truncatula] gi|355501 0.968 0.529 0.534 5e-70
297829076 461 phospholipid/glycerol acyltransferase fa 0.944 0.518 0.531 2e-68
7596761 408 hypothetical protein [Arabidopsis thalia 0.916 0.568 0.520 2e-61
>gi|359487638|ref|XP_002283765.2| PREDICTED: uncharacterized protein LOC100252917 [Vitis vinifera] gi|296089698|emb|CBI39517.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  333 bits (854), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 164/262 (62%), Positives = 204/262 (77%), Gaps = 14/262 (5%)

Query: 3   QGMDMAIAKLNSGGWVHIFPEGGRSRDGGKTVGSPKRGVGRLILDADNVPMVVPFVHTGM 62
           +GMDMA++KLNSGGWVHIFPEG RSRDGGKT+GS KRGVGRL+LDADN P+VVPFVHTGM
Sbjct: 196 KGMDMAVSKLNSGGWVHIFPEGSRSRDGGKTMGSAKRGVGRLVLDADNTPIVVPFVHTGM 255

Query: 63  QEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLK 122
           QEVMPIGA FPRIG+ VTVLIGDPI FDDL++EEQT+++SRGKLYDAV+SR+  RL++LK
Sbjct: 256 QEVMPIGANFPRIGQAVTVLIGDPIHFDDLLNEEQTQHMSRGKLYDAVSSRVSRRLQELK 315

Query: 123 LQVDRLALEQP---------SAECVADILHMVDQESLGLQNHLLNEDYSLAQ-EALVQSK 172
           +QVD+LALE           + E  A ILH VD ES G+ +++ +ED S ++ E     K
Sbjct: 316 VQVDKLALEHSIQLQNHDMQTTEWAAGILHQVDWESFGMGSYITSEDDSSSRLEIQSPMK 375

Query: 173 LDITPTQERS----FFRMGLSYGDAFASRMRGYMDPTELMGFAARGLFMNGRTTDIAAIV 228
           L++T TQE +    +F MG SY     SR+RGYMDPTELMGFAARGLF+N R  +  A +
Sbjct: 376 LNVTNTQEHAPSERYFGMGFSYEGGIVSRIRGYMDPTELMGFAARGLFLNRRAEEKLASI 435

Query: 229 RERGPLRAWKQYMEANLLGKWN 250
           +E  PL+AWKQ++EAN+L +WN
Sbjct: 436 QEIRPLKAWKQFLEANILPQWN 457




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147786913|emb|CAN68895.1| hypothetical protein VITISV_026039 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224123600|ref|XP_002330161.1| predicted protein [Populus trichocarpa] gi|222871617|gb|EEF08748.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255542736|ref|XP_002512431.1| taz protein, putative [Ricinus communis] gi|223548392|gb|EEF49883.1| taz protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449435629|ref|XP_004135597.1| PREDICTED: uncharacterized protein LOC101222774 [Cucumis sativus] gi|449517345|ref|XP_004165706.1| PREDICTED: uncharacterized LOC101222774 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356505825|ref|XP_003521690.1| PREDICTED: tafazzin-like [Glycine max] Back     alignment and taxonomy information
>gi|356572982|ref|XP_003554644.1| PREDICTED: uncharacterized protein LOC100817507 [Glycine max] Back     alignment and taxonomy information
>gi|357511839|ref|XP_003626208.1| Tafazzin [Medicago truncatula] gi|355501223|gb|AES82426.1| Tafazzin [Medicago truncatula] Back     alignment and taxonomy information
>gi|297829076|ref|XP_002882420.1| phospholipid/glycerol acyltransferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297328260|gb|EFH58679.1| phospholipid/glycerol acyltransferase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|7596761|gb|AAF64532.1| hypothetical protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query253
TAIR|locus:2079772448 AT3G05510 [Arabidopsis thalian 0.913 0.515 0.526 2.2e-59
RGD|1588532262 Taz "tafazzin" [Rattus norvegi 0.490 0.473 0.354 3.7e-16
ZFIN|ZDB-GENE-030131-684262 taz "tafazzin" [Danio rerio (t 0.490 0.473 0.346 3.7e-16
UNIPROTKB|E1BJ23261 TAZ "Uncharacterized protein" 0.490 0.475 0.354 6e-16
UNIPROTKB|E2R0P9288 TAZ "Uncharacterized protein" 0.490 0.430 0.354 7.7e-16
UNIPROTKB|J9PBC8290 TAZ "Uncharacterized protein" 0.490 0.427 0.354 7.7e-16
UNIPROTKB|Q16635292 TAZ "Tafazzin" [Homo sapiens ( 0.490 0.424 0.354 1.6e-15
WB|WBGene00006491284 acl-3 [Caenorhabditis elegans 0.494 0.440 0.330 1.8e-11
FB|FBgn0026619378 Taz "Tafazzin" [Drosophila mel 0.498 0.333 0.263 3.2e-10
DICTYBASE|DDB_G0291922285 taz "tafazzin family protein" 0.391 0.347 0.354 1.5e-09
TAIR|locus:2079772 AT3G05510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
 Identities = 130/247 (52%), Positives = 174/247 (70%)

Query:     3 QGMDMAIAKLNSGGWVHIFPEGGRSRDGGKTVGSPKRGVGRLILDADNVPMVVPFVHTGM 62
             QGMD+AI+KLN+GGWVHIFPEG RSRDGGKT+GS KRG+GRLILDAD +PMVVPFVHTGM
Sbjct:   203 QGMDIAISKLNNGGWVHIFPEGSRSRDGGKTMGSAKRGIGRLILDADTLPMVVPFVHTGM 262

Query:    63 QEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLK 122
             Q++MP+GA+ PRIGKTVTV+IGDPI F+D++  E  +++SR  LYDAV+SRIG RL  LK
Sbjct:   263 QDIMPVGASVPRIGKTVTVIIGDPIHFNDILSTEGAQHVSRKHLYDAVSSRIGQRLYDLK 322

Query:   123 LQVDRLALEQPS---------AECVADILHMVDQESLGLQNHLLNEDYSLAQEALVQSKL 173
              QVDR+ +EQ S         ++  A+I H VD +S G+     +E+ S + + + QS  
Sbjct:   323 AQVDRVYIEQQSMMSHNAKTPSDRAAEIFHRVDWDSFGMGAQF-SEESSPSSKPIGQSDD 381

Query:   174 DITPTQERSFFRMGLSYGDAFASRMRGYMDPTELMGFAARGLFMNGRTTDIAAIVRERGP 233
              I  + +R   R+    G +   +++  MD TE+MGFAARGL MN   + + +    R P
Sbjct:   382 RIVRSPKR---RVSPEGGVSL--KIKKLMDSTEMMGFAARGLLMNEYKSRVESANVGR-P 435

Query:   234 LRAWKQY 240
             L+AW++Y
Sbjct:   436 LKAWREY 442




GO:0005739 "mitochondrion" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA;ISS
GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA;ISS
GO:0006655 "phosphatidylglycerol biosynthetic process" evidence=RCA
RGD|1588532 Taz "tafazzin" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-684 taz "tafazzin" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E1BJ23 TAZ "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2R0P9 TAZ "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|J9PBC8 TAZ "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q16635 TAZ "Tafazzin" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
WB|WBGene00006491 acl-3 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
FB|FBgn0026619 Taz "Tafazzin" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0291922 taz "tafazzin family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query253
cd07989184 cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltr 4e-22
smart00563118 smart00563, PlsC, Phosphate acyltransferases 1e-09
COG0204255 COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyl 3e-09
pfam01553131 pfam01553, Acyltransferase, Acyltransferase 7e-08
cd07992203 cd07992, LPLAT_AAK14816-like, Lysophospholipid Acy 2e-04
PLN02901214 PLN02901, PLN02901, 1-acyl-sn-glycerol-3-phosphate 3e-04
cd07986210 cd07986, LPLAT_ACT14924-like, Lysophospholipid Acy 0.001
>gnl|CDD|153251 cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like Back     alignment and domain information
 Score = 89.6 bits (223), Expect = 4e-22
 Identities = 36/98 (36%), Positives = 46/98 (46%), Gaps = 5/98 (5%)

Query: 1   MLQGMDMAIAKLNSGGWVHIFPEGGRSRDGGKTVGSPKRGVGRLILDADNVPMVVPFVHT 60
             + +  AI  L  G  V IFPEG RSRDG   +   K G  RL  +A  VP +VP   +
Sbjct: 83  AREALREAIEALKEGESVVIFPEGTRSRDG--ELLPFKSGAFRLAKEA-GVP-IVPVAIS 138

Query: 61  GMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDEEQT 98
           G    +P G         VTV IG+PI  + L   E+ 
Sbjct: 139 GTWGSLPKGK-KLPRPGRVTVRIGEPIPPEGLELAEED 175


Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins. Length = 184

>gnl|CDD|214724 smart00563, PlsC, Phosphate acyltransferases Back     alignment and domain information
>gnl|CDD|223282 COG0204, PlsC, 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|216567 pfam01553, Acyltransferase, Acyltransferase Back     alignment and domain information
>gnl|CDD|153254 cd07992, LPLAT_AAK14816-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like Back     alignment and domain information
>gnl|CDD|215488 PLN02901, PLN02901, 1-acyl-sn-glycerol-3-phosphate acyltransferase Back     alignment and domain information
>gnl|CDD|153248 cd07986, LPLAT_ACT14924-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 253
KOG2847286 consensus Phosphate acyltransferase [Lipid transpo 99.84
PRK15018245 1-acyl-sn-glycerol-3-phosphate acyltransferase; Pr 99.76
PTZ00261355 acyltransferase; Provisional 99.76
PLN02901214 1-acyl-sn-glycerol-3-phosphate acyltransferase 99.67
KOG2848276 consensus 1-acyl-sn-glycerol-3-phosphate acyltrans 99.67
cd07987212 LPLAT_MGAT-like Lysophospholipid Acyltransferases 99.67
cd07992203 LPLAT_AAK14816-like Lysophospholipid Acyltransfera 99.63
cd07986210 LPLAT_ACT14924-like Lysophospholipid Acyltransfera 99.63
PLN02783315 diacylglycerol O-acyltransferase 99.6
cd07983189 LPLAT_DUF374-like Lysophospholipid Acyltransferase 99.54
cd07988163 LPLAT_ABO13168-like Lysophospholipid Acyltransfera 99.46
PRK08043 718 bifunctional acyl-[acyl carrier protein] synthetas 99.44
cd07985235 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLA 99.44
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 99.44
cd07991211 LPLAT_LPCAT1-like Lysophospholipid Acyltransferase 99.42
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 99.4
COG0204255 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferas 99.39
cd06551187 LPLAT Lysophospholipid acyltransferases (LPLATs) o 99.39
cd07993205 LPLAT_DHAPAT-like Lysophospholipid Acyltransferase 99.38
cd07989184 LPLAT_AGPAT-like Lysophospholipid Acyltransferases 99.25
TIGR03703 799 plsB glycerol-3-phosphate O-acyltransferase. Membe 99.24
PRK03355 783 glycerol-3-phosphate acyltransferase; Validated 99.22
PLN02833376 glycerol acyltransferase family protein 99.16
PRK04974 818 glycerol-3-phosphate acyltransferase; Validated 99.13
cd07984192 LPLAT_LABLAT-like Lysophospholipid Acyltransferase 99.12
PLN02177497 glycerol-3-phosphate acyltransferase 99.05
TIGR00530130 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltra 99.02
smart00563118 PlsC Phosphate acyltransferases. Function in phosp 99.01
PTZ00374 1108 dihydroxyacetone phosphate acyltransferase; Provis 98.99
PF01553132 Acyltransferase: Acyltransferase; InterPro: IPR002 98.96
COG2121214 Uncharacterized protein conserved in bacteria [Fun 98.91
PLN02499498 glycerol-3-phosphate acyltransferase 98.89
PRK11915 621 glycerol-3-phosphate acyltransferase; Reviewed 98.88
PRK14014301 putative acyltransferase; Provisional 98.68
PLN02588525 glycerol-3-phosphate acyltransferase 98.67
PF03982297 DAGAT: Diacylglycerol acyltransferase ; InterPro: 98.34
PRK08419298 lipid A biosynthesis lauroyl acyltransferase; Revi 98.24
PLN02349426 glycerol-3-phosphate acyltransferase 98.02
PRK07920298 lipid A biosynthesis lauroyl acyltransferase; Prov 97.96
COG2937 810 PlsB Glycerol-3-phosphate O-acyltransferase [Lipid 97.7
PF03279295 Lip_A_acyltrans: Bacterial lipid A biosynthesis ac 97.35
PLN02510374 probable 1-acyl-sn-glycerol-3-phosphate acyltransf 97.35
KOG0831334 consensus Acyl-CoA:diacylglycerol acyltransferase 97.33
PRK06553308 lipid A biosynthesis lauroyl acyltransferase; Prov 97.29
cd07990193 LPLAT_LCLAT1-like Lysophospholipid Acyltransferase 97.28
PRK06628290 lipid A biosynthesis lauroyl acyltransferase; Prov 97.16
PRK05646310 lipid A biosynthesis lauroyl acyltransferase; Prov 96.97
PRK08943314 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA ac 96.75
PLN02380376 1-acyl-sn-glycerol-3-phosphate acyltransferase 96.74
PRK06946293 lipid A biosynthesis lauroyl acyltransferase; Prov 96.71
KOG3729 715 consensus Mitochondrial glycerol-3-phosphate acylt 96.62
PRK08706289 lipid A biosynthesis lauroyl acyltransferase; Prov 96.6
PRK05906454 lipid A biosynthesis lauroyl acyltransferase; Prov 96.56
TIGR02207303 lipid_A_htrB lipid A biosynthesis lauroyl (or palm 96.41
PRK06860309 lipid A biosynthesis lauroyl acyltransferase; Prov 96.41
KOG3730 685 consensus Acyl-CoA:dihydroxyactetone-phosphate acy 96.36
TIGR02208305 lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl) 96.36
PRK08905289 lipid A biosynthesis lauroyl acyltransferase; Vali 96.33
COG1560308 HtrB Lauroyl/myristoyl acyltransferase [Cell envel 96.21
PRK08734305 lipid A biosynthesis lauroyl acyltransferase; Prov 96.09
PRK08733306 lipid A biosynthesis lauroyl acyltransferase; Prov 96.04
PRK08025305 lipid A biosynthesis palmitoleoyl acyltransferase; 95.58
PRK15174656 Vi polysaccharide export protein VexE; Provisional 95.55
PRK05645295 lipid A biosynthesis lauroyl acyltransferase; Prov 94.48
KOG4321279 consensus Predicted phosphate acyltransferases [Li 94.4
PF0402874 DUF374: Domain of unknown function (DUF374); Inter 88.12
COG3176292 Putative hemolysin [General function prediction on 86.17
>KOG2847 consensus Phosphate acyltransferase [Lipid transport and metabolism] Back     alignment and domain information
Probab=99.84  E-value=3.4e-21  Score=171.78  Aligned_cols=128  Identities=48%  Similarity=0.768  Sum_probs=118.0

Q ss_pred             CHHHHHHHHHHHhCCCeEEEecCCeecCCCCcccCCcCchHHHHHHhcCCCCeEEEEEEeCCCccCcCC-CCCCCCCCeE
Q 025399            1 MLQGMDMAIAKLNSGGWVHIFPEGGRSRDGGKTVGSPKRGVGRLILDADNVPMVVPFVHTGMQEVMPIG-ATFPRIGKTV   79 (253)
Q Consensus         1 ~q~al~~a~~~Lk~G~~VvIFPEGTRsr~g~~~l~~fK~G~~rLA~~a~~~P~IVPV~I~G~~~~~p~~-~~~pr~~~~v   79 (253)
                      +|++|+.|++.|+.|.||+|||||.+...+ .++..||+|++||+.++...|+|+|+++.|.++++|.. ..+|++|++|
T Consensus       136 YQ~gmd~~i~kLn~g~WVHiFPEGkV~q~~-~~~~rfKWGigRlI~ea~~~PIVlPi~h~Gmedi~P~~~p~vp~~Gk~v  214 (286)
T KOG2847|consen  136 YQKGMDFAIEKLNDGSWVHIFPEGKVNQME-KEMLRFKWGIGRLILEAPKPPIVLPIWHTGMEDIMPEAPPYVPRFGKTV  214 (286)
T ss_pred             ccccHHHHHHhcCCCCeEEECCCceeeccc-cchhheeccceeeeecCCCCCEEeehhhhhHHHhCccCCCccCCCCCEE
Confidence            589999999999999999999999999744 57999999999999999977899999999999999998 7889999999


Q ss_pred             EEEEcCcccCCCCcchHHhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 025399           80 TVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQVDRLA  129 (253)
Q Consensus        80 ~I~~GePI~~~~~~~~~~~~~~~~~e~~~~v~~~I~~~L~~L~~~~eal~  129 (253)
                      +|+||+||..++..........+..++.+.+++.|++++++|.++++++.
T Consensus       215 tV~IG~P~~~~d~~~t~l~~~~~~p~~~k~~td~iq~~~qdL~~~~~~~~  264 (286)
T KOG2847|consen  215 TVTIGDPINFDDVEWTVLAEKVSTPKLRKALTDEIQERFQDLREQVERLL  264 (286)
T ss_pred             EEEeCCCcchhHHHHHHHhhccCCchhhhhhhHHHHHHHHHHHHHHHHHH
Confidence            99999999999988777777788899999999999999999999988764



>PRK15018 1-acyl-sn-glycerol-3-phosphate acyltransferase; Provisional Back     alignment and domain information
>PTZ00261 acyltransferase; Provisional Back     alignment and domain information
>PLN02901 1-acyl-sn-glycerol-3-phosphate acyltransferase Back     alignment and domain information
>KOG2848 consensus 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>cd07987 LPLAT_MGAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like Back     alignment and domain information
>cd07992 LPLAT_AAK14816-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown AAK14816-like Back     alignment and domain information
>cd07986 LPLAT_ACT14924-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924 Back     alignment and domain information
>PLN02783 diacylglycerol O-acyltransferase Back     alignment and domain information
>cd07983 LPLAT_DUF374-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: DUF374 Back     alignment and domain information
>cd07988 LPLAT_ABO13168-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168 Back     alignment and domain information
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>cd07985 LPLAT_GPAT Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>cd07991 LPLAT_LPCAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>COG0204 PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] Back     alignment and domain information
>cd06551 LPLAT Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis Back     alignment and domain information
>cd07993 LPLAT_DHAPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like Back     alignment and domain information
>cd07989 LPLAT_AGPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like Back     alignment and domain information
>TIGR03703 plsB glycerol-3-phosphate O-acyltransferase Back     alignment and domain information
>PRK03355 glycerol-3-phosphate acyltransferase; Validated Back     alignment and domain information
>PLN02833 glycerol acyltransferase family protein Back     alignment and domain information
>PRK04974 glycerol-3-phosphate acyltransferase; Validated Back     alignment and domain information
>cd07984 LPLAT_LABLAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LABLAT-like Back     alignment and domain information
>PLN02177 glycerol-3-phosphate acyltransferase Back     alignment and domain information
>TIGR00530 AGP_acyltrn 1-acyl-sn-glycerol-3-phosphate acyltransferases Back     alignment and domain information
>smart00563 PlsC Phosphate acyltransferases Back     alignment and domain information
>PTZ00374 dihydroxyacetone phosphate acyltransferase; Provisional Back     alignment and domain information
>PF01553 Acyltransferase: Acyltransferase; InterPro: IPR002123 This family contains acyltransferases involved in phospholipid biosynthesis and other proteins of unknown function [] Back     alignment and domain information
>COG2121 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PLN02499 glycerol-3-phosphate acyltransferase Back     alignment and domain information
>PRK11915 glycerol-3-phosphate acyltransferase; Reviewed Back     alignment and domain information
>PRK14014 putative acyltransferase; Provisional Back     alignment and domain information
>PLN02588 glycerol-3-phosphate acyltransferase Back     alignment and domain information
>PF03982 DAGAT: Diacylglycerol acyltransferase ; InterPro: IPR007130 The terminal step of triacylglycerol (TAG) formation is catalysed by the enzyme diacylglycerol acyltransferase (DAGAT) [, ] Back     alignment and domain information
>PRK08419 lipid A biosynthesis lauroyl acyltransferase; Reviewed Back     alignment and domain information
>PLN02349 glycerol-3-phosphate acyltransferase Back     alignment and domain information
>PRK07920 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>COG2937 PlsB Glycerol-3-phosphate O-acyltransferase [Lipid metabolism] Back     alignment and domain information
>PF03279 Lip_A_acyltrans: Bacterial lipid A biosynthesis acyltransferase; InterPro: IPR004960 Bacterial lipopolysachharides (LPS) are glycolipids that make up the outer monolayer of the outer membranes of most Gram-negative bacteria Back     alignment and domain information
>PLN02510 probable 1-acyl-sn-glycerol-3-phosphate acyltransferase Back     alignment and domain information
>KOG0831 consensus Acyl-CoA:diacylglycerol acyltransferase (DGAT) [Lipid transport and metabolism] Back     alignment and domain information
>PRK06553 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>cd07990 LPLAT_LCLAT1-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like Back     alignment and domain information
>PRK06628 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>PRK05646 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>PRK08943 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated Back     alignment and domain information
>PLN02380 1-acyl-sn-glycerol-3-phosphate acyltransferase Back     alignment and domain information
>PRK06946 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>KOG3729 consensus Mitochondrial glycerol-3-phosphate acyltransferase GPAT [Lipid transport and metabolism] Back     alignment and domain information
>PRK08706 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>PRK05906 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>TIGR02207 lipid_A_htrB lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase Back     alignment and domain information
>PRK06860 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>KOG3730 consensus Acyl-CoA:dihydroxyactetone-phosphate acyltransferase DHAPAT [Lipid transport and metabolism] Back     alignment and domain information
>TIGR02208 lipid_A_msbB lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase Back     alignment and domain information
>PRK08905 lipid A biosynthesis lauroyl acyltransferase; Validated Back     alignment and domain information
>COG1560 HtrB Lauroyl/myristoyl acyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK08734 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>PRK08733 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>PRK08025 lipid A biosynthesis palmitoleoyl acyltransferase; Reviewed Back     alignment and domain information
>PRK15174 Vi polysaccharide export protein VexE; Provisional Back     alignment and domain information
>PRK05645 lipid A biosynthesis lauroyl acyltransferase; Provisional Back     alignment and domain information
>KOG4321 consensus Predicted phosphate acyltransferases [Lipid transport and metabolism] Back     alignment and domain information
>PF04028 DUF374: Domain of unknown function (DUF374); InterPro: IPR007172 This is a bacterial domain of unknown function Back     alignment and domain information
>COG3176 Putative hemolysin [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query253
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
1iuq_A367 Glycerol-3-phosphate acyltransferase; open twisted 3e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 50.6 bits (120), Expect = 2e-07
 Identities = 38/270 (14%), Positives = 83/270 (30%), Gaps = 82/270 (30%)

Query: 18  VHIFPEGGRSRDGGKTVGSPKRGVGRLILDADNVPMVVPFVHTGMQEVMPIGATFPRIGK 77
             +F +   SR   +     ++ +  L   A NV      +  G+     +G+     GK
Sbjct: 123 NQVFAKYNVSR--LQPYLKLRQALLELR-PAKNV-----LID-GV-----LGS-----GK 163

Query: 78  TVTVL--------------------IGDPIEFDDLVDEEQTKYLSRGKLYDAVA---SRI 114
           T   L                    + +    + +++  Q         + + +   S I
Sbjct: 164 TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI 223

Query: 115 GHRLKKLKLQVDRLALEQPSAECVADILHMV-DQESLGLQNHLLNEDYSLAQEAL-VQSK 172
             R+  ++ ++ RL   +P   C+  +L  V + ++                 A  +  K
Sbjct: 224 KLRIHSIQAELRRLLKSKPYENCL-LVLLNVQNAKAW---------------NAFNLSCK 267

Query: 173 LDITPTQERS--FFRMGLSYGDAFASRMRGYMDPTELMGFAARGLFMNGRTTD------- 223
           + +T T+ +    F    +            + P E+     +  +++ R  D       
Sbjct: 268 ILLT-TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLK--YLDCRPQDLPREVLT 324

Query: 224 --------IAAIVRERGPLRAWKQYMEANL 245
                   IA  +R+ G    W  +   N 
Sbjct: 325 TNPRRLSIIAESIRD-GLAT-WDNWKHVNC 352


>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A Length = 367 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query253
1iuq_A367 Glycerol-3-phosphate acyltransferase; open twisted 99.53
>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A Back     alignment and structure
Probab=99.53  E-value=1.9e-14  Score=134.25  Aligned_cols=117  Identities=17%  Similarity=0.261  Sum_probs=85.8

Q ss_pred             HHHHHHHHHHHhC-CCeEEEecCCeecCC----CCcccCCcCchHH----HHHHhcCCCC-eEEEEEEeCCCccCcCC--
Q 025399            2 LQGMDMAIAKLNS-GGWVHIFPEGGRSRD----GGKTVGSPKRGVG----RLILDADNVP-MVVPFVHTGMQEVMPIG--   69 (253)
Q Consensus         2 q~al~~a~~~Lk~-G~~VvIFPEGTRsr~----g~~~l~~fK~G~~----rLA~~a~~~P-~IVPV~I~G~~~~~p~~--   69 (253)
                      +++|+.+.+.|++ |.+|+|||||||+++    |++.+.+||.|.+    +||.+++ +| -||||+|. +.++++..  
T Consensus       209 ~ksl~~~~~~Lk~GG~sI~IFPEGTRsR~~~~~g~l~~~~Fk~gs~~~~~~LA~ksg-~P~hIvPvaI~-t~~imppp~~  286 (367)
T 1iuq_A          209 TRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYPAPFDASSVDNMRRLIQHSD-VPGHLFPLALL-CHDIMPPPSQ  286 (367)
T ss_dssp             HHHHHHHHHHHHHCCCEEEECTTCSCCCBCTTTCCBCCCCCCHHHHHHHHHHHHTSS-SCEEEEEEEEE-CGGGSCCC--
T ss_pred             HHHHHHHHHHHHcCCeEEEEeCCCCCCCCCCCCCccccccccchhhhHHHHHHHHcC-CCceEEEEEEE-eccccCCccc
Confidence            4689999999999 559999999999995    5445677999999    9999999 55 38999999 56777763  


Q ss_pred             -------CCCCCCCCeEEEEEcCcccCCCCcchHHhhhccHHHHHHHHHHHHHHHHHHHHHHH
Q 025399           70 -------ATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQV  125 (253)
Q Consensus        70 -------~~~pr~~~~v~I~~GePI~~~~~~~~~~~~~~~~~e~~~~v~~~I~~~L~~L~~~~  125 (253)
                             ..+.++ .+|.|.||+||+++++.....    +.++..+++++.+++.|.+...++
T Consensus       287 ve~~~g~~r~i~~-~~V~v~ig~pI~~~~l~~~~e----~~~e~~~~l~e~v~~~I~~~y~~l  344 (367)
T 1iuq_A          287 VEIEIGEKRVIAF-NGAGLSVAPEISFEEIAATHK----NPEEVREAYSKALFDSVAMQYNVL  344 (367)
T ss_dssp             --------CCCCC-BCCEEEECCCCCHHHHHHTSS----SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccceeec-ccEEEEECCccchhhcccccc----chHHHHHHHHHHHHHHHHHHHHHH
Confidence                   112233 489999999999987652211    123444566677777776655443




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 253
d1iuqa_367 c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransf 4e-10
>d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]} Length = 367 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Glycerol-3-phosphate (1)-acyltransferase
superfamily: Glycerol-3-phosphate (1)-acyltransferase
family: Glycerol-3-phosphate (1)-acyltransferase
domain: Glycerol-3-phosphate (1)-acyltransferase
species: Cushaw squash (Cucurbita moschata) [TaxId: 3662]
 Score = 56.9 bits (137), Expect = 4e-10
 Identities = 22/137 (16%), Positives = 41/137 (29%), Gaps = 15/137 (10%)

Query: 1   MLQGMDMAIAKLNSGGWVHIFPEGGRSRDGGKTV-------GSPKRGVGRLILDADNVPM 53
                +MA+        + I P GGR R    T         +      R ++   +VP 
Sbjct: 209 TRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYPAPFDASSVDNMRRLIQHSDVPG 268

Query: 54  -VVPFVHTGMQEVMPIGATFPRIGK-------TVTVLIGDPIEFDDLVDEEQTKYLSRGK 105
            + P        + P       IG+          + +   I F+++    +     R  
Sbjct: 269 HLFPLALLCHDIMPPPSQVEIEIGEKRVIAFNGAGLSVAPEISFEEIAATHKNPEEVREA 328

Query: 106 LYDAVASRIGHRLKKLK 122
              A+   +  +   LK
Sbjct: 329 YSKALFDSVAMQYNVLK 345


Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query253
d1iuqa_367 Glycerol-3-phosphate (1)-acyltransferase {Cushaw s 99.42
>d1iuqa_ c.112.1.1 (A:) Glycerol-3-phosphate (1)-acyltransferase {Cushaw squash (Cucurbita moschata) [TaxId: 3662]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Glycerol-3-phosphate (1)-acyltransferase
superfamily: Glycerol-3-phosphate (1)-acyltransferase
family: Glycerol-3-phosphate (1)-acyltransferase
domain: Glycerol-3-phosphate (1)-acyltransferase
species: Cushaw squash (Cucurbita moschata) [TaxId: 3662]
Probab=99.42  E-value=2.1e-13  Score=125.49  Aligned_cols=113  Identities=18%  Similarity=0.254  Sum_probs=79.6

Q ss_pred             HHHHHHHHHHHhCCC-eEEEecCCeecC----CCCcccCCcCchH----HHHHHhcCCCCe-EEEEEEeCCCccCcCCCC
Q 025399            2 LQGMDMAIAKLNSGG-WVHIFPEGGRSR----DGGKTVGSPKRGV----GRLILDADNVPM-VVPFVHTGMQEVMPIGAT   71 (253)
Q Consensus         2 q~al~~a~~~Lk~G~-~VvIFPEGTRsr----~g~~~l~~fK~G~----~rLA~~a~~~P~-IVPV~I~G~~~~~p~~~~   71 (253)
                      +++|+.+.+.|++|+ +|+|||||||++    +|++...+|++|.    ++||..++ +|. |+||+|.|++.+.|.+..
T Consensus       209 ~~al~~~~~lL~~Gg~~v~IfPEGTRsr~~~~dg~l~p~~F~~~~~~~~~~LA~~sg-vP~hV~Pvai~~~d~~pP~~~v  287 (367)
T d1iuqa_         209 TRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEWYPAPFDASSVDNMRRLIQHSD-VPGHLFPLALLCHDIMPPPSQV  287 (367)
T ss_dssp             HHHHHHHHHHHHHCCCEEEECTTCSCCCBCTTTCCBCCCCCCHHHHHHHHHHHHTSS-SCEEEEEEEEECGGGSCCC---
T ss_pred             hHHHHHHHHHhhcCCeEEEEeccCcccCcccccccccccccCccchHHHHHHHhcCC-CCceEechhhhcccccCCCccc
Confidence            357999999999874 678999999995    5665566777764    78999999 774 999999998776665421


Q ss_pred             --------CCCCCCeEEEEEcCcccCCCCcchHHhhhccHHHHHHHHHHHHHHHHHH
Q 025399           72 --------FPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKK  120 (253)
Q Consensus        72 --------~pr~~~~v~I~~GePI~~~~~~~~~~~~~~~~~e~~~~v~~~I~~~L~~  120 (253)
                              .++ +.+|.|.||+||+++++.....+    ..+..+..++.|.+.+.+
T Consensus       288 ~~~ige~R~~~-~~~V~i~~G~pId~~~~~~~~~~----~~e~~ea~~k~l~d~v~e  339 (367)
T d1iuqa_         288 EIEIGEKRVIA-FNGAGLSVAPEISFEEIAATHKN----PEEVREAYSKALFDSVAM  339 (367)
T ss_dssp             -------CCCC-CBCCEEEECCCCCHHHHHHTSSS----HHHHHHHHHHHHHHHHHH
T ss_pred             ccchhhccccC-CCceeEEeCCCcchhhhhhhccc----hHHHHHHHHHHHHHHHHH
Confidence                    222 34899999999999876544322    234444455555555543