Citrus Sinensis ID: 025436

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250---
Protein Sequence
MAMVLDANFESEFPHWASVRRCFRPDSPFFASGNIERELLAKQVALDFSEDEKYQLENMVTEDGRRVCCPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFKKAHPSKKQRQKNQRKQALQKKEASSSMEVEDETIDGLVSAVSKLSTSDSTPSSVSFGRRHTRGLTFVPRAVHHERKPDSTSMQTKG
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccHHHHHHHHHccccccHHHHHHcccccccccEEEccccccccccccHHHHHHHHHccccccccccccccccHHHHHHHHHHHccHHHHHHHHcccccEEEEccccccccccHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEccccccccccccEEccccccccHcccccHHHHHHHHHHHHHcccccccccccccccccccEEccccccccccccHHHHHHHHHHHHccHHHHHHcccccHHHHHHHHHHHcHHHHHHHHHcccccEEEEEcccccccccHHHHHHHHHHHcccccccccccccccccccccccHccccccccccccccccccccccccccccccccccccccccEEccccccccEEEcccccccccccccccccccc
Coil and Loop (DISEMBL)
mamvldanfesefphwasvrrcfrpdspffasgnIERELLAKQVALDFSEDEKYQLEnmvtedgrrvccpivgcnarMRSLEEFEdhynarhtascsvccrvyptsrllSIHVSEAHDSFfqakvargypmyeclvegcglkfknyKSRQQHlvdkhkfptsfeffkkahpskkqRQKNQRKQALQKkeasssmevedETIDGLVSAVSklstsdstpssvsfgrrhtrgltfvpravhherkpdstsmqtkg
Flexible Loop (DISEMBL)
MAMVLDANFESEFPHWASVRRCFRPDSPFFASGNIERELLAKQVALDFSEDEKYQLenmvtedgrrvcCPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFkkahpskkqrqknqRKQAlqkkeasssmevedETIDGLVSAvsklstsdstpssvsfgrrhtrgltfvpravhherkpdstsmqtkg
Low Complexity Region (SEG)
MAMVLDANFESEFPHWASVRRCFRPDSPFFASGNIERELLAKQVALDFSEDEKYQLENMVTEDGRRVCCPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFKKAHPSkkqrqknqrkqalqkkEASSSMEVEDETIDGLVSAvsklstsdstpssvsFGRRHTRGLTFVPRAVHHERKPDSTSMQTKG
Disordered region (IsUnstruct)
*******NFESEFPHWASVRRCFRPDSPFFASGNIERELLAKQVALDFSEDEKYQLENMVTEDGRRVCCPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEF****************************************************************************************
Disordered Region (DISOPRED)
**********SEFPHWASVRRCFRPDSPFFASGNIERELLAKQVA*******************RRVCCPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAK*ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPT********************************************************************************************
Disordered Region (DISEMBL)
MAMVLDANFESEFPHWASVRRCFRPDSPFFASGNIERELLAKQVALDFSEDEKYQLENMVTEDGRRVCCPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK********************************TIDGLVSAVS***************RRHTRGLTFVPRAVH**************
Disordered Region (DISPRO)
*AMVLDANFESEFPHWASVRRCFRPDSPFFASGNIERELLAKQVALDFSEDEKYQLENMVTEDGRRVCCPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK************************************************S*PSSV***RRHTRGLTFVPR*****************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAMVLDANFESEFPHWASVRRCFRPDSPFFASGNIERELLAKQVALDFSEDEKYQLENMVTEDGRRVCCPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFKKAHPSKKQRQKNQRKQALQKKEASSSMEVEDETIDGLVSAVSKLSTSDSTPSSVSFGRRHTRGLTFVPRAVHHERKPDSTSMQTKG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	253	2.2.26 [Sep-21-2011]
Q7ZZ00	277	Zinc finger protein 511 O	yes	no	0.794	0.725	0.352	7e-29
Q6P0X2	227	Zinc finger protein 511 O	no	no	0.541	0.603	0.358	7e-20
Q8NB15	262	Zinc finger protein 511 O	no	no	0.509	0.492	0.361	1e-18
Q9V574	221	Protein lethal(2)k10201 O	yes	no	0.545	0.624	0.337	8e-15

>sp|Q7ZZ00|ZN511_DANRE Zinc finger protein 511 OS=Danio rerio GN=znf511 PE=2 SV=1

 Score =  127 bits (319), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 113/221 (51%), Gaps = 20/221 (9%)

Query: 23  FRPDSPFFASGNIERELLAKQVALDFSEDEKYQLENMVTEDGRRVCCPIVGCNARMRSLE 82
           F  +  +F  G+I R +  + +   F +D++      ++E      C I GC     +LE
Sbjct: 59  FAVEDEYFEDGDINRHMYLQNIVTSFVDDKQ---PPTISE----FRCHIAGCKQLFDTLE 111

Query: 83  EFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLK 142
            +E HYNA H   CS C R +P++RLL IH+ E HDS FQ  +A    MYECLVEGCGLK
Sbjct: 112 GYEHHYNALHRNVCSNCKRSFPSNRLLEIHILEWHDSLFQI-MAEKQCMYECLVEGCGLK 170

Query: 143 FKNYKSRQQHLVDKHKFPTSFEFFKKAHPSKKQRQKNQRKQ--------ALQKKEASSSM 194
           FK  K R+ HL+  H +P  F F K     +   +K Q+K+         + ++E+S SM
Sbjct: 171 FKTSKERKDHLIRTHSYPADFRFDKSKKIGRTTEKKTQQKKDAHMEVSATVLQQESSESM 230

Query: 195 EV----EDETIDGLVSAVSKLSTSDSTPSSVSFGRRHTRGL 231
           +     E    + + +A  K   S   PSS+ FG+   RG 
Sbjct: 231 DFSLTPEPVETEPMQAANLKPRYSYKVPSSICFGQGSVRGF 271

May be involved in transcriptional regulation.
Danio rerio (taxid: 7955)

>sp|Q6P0X2|ZN511_MOUSE Zinc finger protein 511 OS=Mus musculus GN=Znf511 PE=2 SV=2

 Score = 97.8 bits (242), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 79/145 (54%), Gaps = 8/145 (5%)

Query: 23  FRPDSPFFASGNIERELLAKQVALDFSEDEKYQLENMVTEDGRRVCCPIVGCNARMRSLE 82
           F  D  FF  G+++R L  + +    SE  +   ++MV E      C + GC     ++E
Sbjct: 43  FPRDHEFFEDGDVQRHLYLQDMLTQVSETPE---KSMVPE----FTCQVAGCCQVFAAIE 95

Query: 83  EFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLK 142
           +++ HY+  H  +CS C R +P+  LL +H+ E HDS FQ  +A+   MY+CLVE C  K
Sbjct: 96  DYQHHYHMMHGNTCSFCNRAFPSGHLLDVHILEWHDSLFQI-LAQRQDMYQCLVESCPEK 154

Query: 143 FKNYKSRQQHLVDKHKFPTSFEFFK 167
           FK  + R+ H+V  H +P  F F K
Sbjct: 155 FKTSQDRKDHMVRLHLYPADFRFDK 179

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q8NB15|ZN511_HUMAN Zinc finger protein 511 OS=Homo sapiens GN=ZNF511 PE=2 SV=1

 Score = 94.0 bits (232), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 72/141 (51%), Gaps = 12/141 (8%)

Query: 29  FFASGNIERELLAKQVALDFSEDEKYQLENMVTEDGR--RVCCPIVGCNARMRSLEEFED 86
           FF  G+++R L  + V +  ++         V E  R     C + GC     +L+++E 
Sbjct: 49  FFEDGDVQRHLYLQDVIMQVAD---------VPEKPRVPAFACQVAGCCQVFDALDDYEH 99

Query: 87  HYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNY 146
           HY+  H   CS C R +P+  LL  H+ E HDS FQ    R   MY+CLVEGC  KFK  
Sbjct: 100 HYHTLHGNVCSFCKRAFPSGHLLDAHILEWHDSLFQILSER-QDMYQCLVEGCTEKFKTS 158

Query: 147 KSRQQHLVDKHKFPTSFEFFK 167
           + R+ H+V  H +P  F F K
Sbjct: 159 RDRKDHMVRMHLYPADFRFDK 179

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9V574|L2K1_DROME Protein lethal(2)k10201 OS=Drosophila melanogaster GN=l(2)k10201 PE=4 SV=2

 Score = 80.9 bits (198), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 73/151 (48%), Gaps = 13/151 (8%)

Query: 86  DHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARG-YPMYECLVEGCGLKFK 144
           D+ +   + SC  C ++ PT+ LL +H++E HD +F A V RG  PM+ C +E C +KF 
Sbjct: 66  DNIDKEQSYSCVECRKMLPTAHLLDLHITEQHDCYFAASVERGDKPMFSCFLEECTIKFH 125

Query: 145 NYKSRQQHLVDKHKFPTSFEFFKKAHPSKKQRQKNQRKQALQKKEASSSMEVEDETIDGL 204
             + R+ H +  HK P ++ F            KN+ KQ  Q K   +SMEV DE I+  
Sbjct: 126 TARQRKDHCIITHKLPANYRF---------DHSKNRGKQKHQGKSKPNSMEV-DEVIEET 175

Query: 205 VSA--VSKLSTSDSTPSSVSFGRRHTRGLTF 233
            S   V   S    T  S   G+    G T 
Sbjct: 176 KSLPYVKAFSFGHQTQRSFYTGKDQRSGKTL 206

Vital for development.

Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	253
225451465	253	PREDICTED: zinc finger protein 511 [Viti	0.948	0.948	0.800	1e-109
449442046	249	PREDICTED: zinc finger protein 511-like	0.980	0.995	0.737	1e-105
224060261	250	predicted protein [Populus trichocarpa]	0.972	0.984	0.756	1e-100
255536875	253	zinc finger protein, putative [Ricinus c	0.940	0.940	0.763	3e-99
27808566	264	At5g14140 [Arabidopsis thaliana]	0.976	0.935	0.678	2e-95
334187673	264	nucleic acid binding / zinc ion binding	0.976	0.935	0.678	2e-95
363806800	254	uncharacterized protein LOC100819557 [Gl	0.988	0.984	0.698	2e-93
9757795	427	unnamed protein product [Arabidopsis tha	0.928	0.550	0.691	7e-93
297807439	264	hypothetical protein ARALYDRAFT_909371 [	0.980	0.939	0.671	1e-90
115485589	306	Os11g0498400 [Oryza sativa Japonica Grou	0.913	0.754	0.561	8e-82

>gi|225451465|ref|XP_002270554.1| PREDICTED: zinc finger protein 511 [Vitis vinifera] gi|147815339|emb|CAN67772.1| hypothetical protein VITISV_010523 [Vitis vinifera] gi|296082337|emb|CBI21342.3| unnamed protein product [Vitis vinifera]

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 193/241 (80%), Positives = 213/241 (88%), Gaps = 1/241 (0%)

Query: 13  FPHWASVRRCFRPDSPFFASGNIERELLAKQVALDFSEDEKYQLENMVTEDGRRVCCPIV 72
           FP+W+SVRR F P+SPFF SGNIERELLAKQVALD +EDEK  L+N+  E+GR + CPIV
Sbjct: 12  FPYWSSVRRRFGPESPFFTSGNIERELLAKQVALDLTEDEKQHLQNLEDEEGRGLFCPIV 71

Query: 73  GCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMY 132
           GC AR+ SLE FEDHYNARHTASCSVC RVYPTSRLLSIHVSEAHDSFFQAKVARGY MY
Sbjct: 72  GCGARLTSLEGFEDHYNARHTASCSVCSRVYPTSRLLSIHVSEAHDSFFQAKVARGYAMY 131

Query: 133 ECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFKKAHPSKKQRQKNQRKQALQKK-EAS 191
           ECLVEGCG+K K+YKSRQQHLVDKHKFPTSFEFFKK  PSKK+RQK QRKQA+ K+ EAS
Sbjct: 132 ECLVEGCGMKLKSYKSRQQHLVDKHKFPTSFEFFKKGQPSKKRRQKLQRKQAVHKREEAS 191

Query: 192 SSMEVEDETIDGLVSAVSKLSTSDSTPSSVSFGRRHTRGLTFVPRAVHHERKPDSTSMQT 251
           S+ME+E+ETI GLVSAVSKLSTSDSTPSSVSFGR HTRG TFVPRAV +E++PDST   T
Sbjct: 192 STMEIEEETISGLVSAVSKLSTSDSTPSSVSFGRHHTRGFTFVPRAVQNEKRPDSTQAIT 251

Query: 252 K 252
           K
Sbjct: 252 K 252

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449442046|ref|XP_004138793.1| PREDICTED: zinc finger protein 511-like [Cucumis sativus] gi|449518803|ref|XP_004166425.1| PREDICTED: zinc finger protein 511-like [Cucumis sativus]

 Score =  385 bits (990), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 183/248 (73%), Positives = 209/248 (84%)

Query: 5   LDANFESEFPHWASVRRCFRPDSPFFASGNIERELLAKQVALDFSEDEKYQLENMVTEDG 64
           ++   +SEFP W  ++R F PDSPFFASGN+ERE+LAKQVALD +EDEK QL NM  +  
Sbjct: 1   MEVESQSEFPCWKPLQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKLQLHNMAVDAR 60

Query: 65  RRVCCPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAK 124
             + CPIVGC A ++SL++FEDHYN+RHTASCSVC RVYPTSRLLS+HVSEAHDSFFQAK
Sbjct: 61  SEIFCPIVGCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDSFFQAK 120

Query: 125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFKKAHPSKKQRQKNQRKQA 184
           VARGY MYECLVEGCGLKFK+YKSR QHLVDKHKF  SFEFFKKAHPSKKQRQK  RKQA
Sbjct: 121 VARGYDMYECLVEGCGLKFKSYKSRHQHLVDKHKFSASFEFFKKAHPSKKQRQKTYRKQA 180

Query: 185 LQKKEASSSMEVEDETIDGLVSAVSKLSTSDSTPSSVSFGRRHTRGLTFVPRAVHHERKP 244
            Q +E +S MEVE+E +DGL+S VSKLSTSDSTPSS+SFGRRHTRGLTFVPRAV  E+  
Sbjct: 181 SQGREETSKMEVENEIMDGLISGVSKLSTSDSTPSSISFGRRHTRGLTFVPRAVQREKVS 240

Query: 245 DSTSMQTK 252
           DS++  TK
Sbjct: 241 DSSTAGTK 248

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224060261|ref|XP_002300111.1| predicted protein [Populus trichocarpa] gi|222847369|gb|EEE84916.1| predicted protein [Populus trichocarpa]

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 189/250 (75%), Positives = 216/250 (86%), Gaps = 4/250 (1%)

Query: 1   MAMVLDANFESE--FPHWASVRRCFRPDSPFFASGNIERELLAKQVALDFSEDEKYQLEN 58
           MAM++D + ++E  FP+W  +RR F P+SPFF+SGNIERELLAKQVALD SEDEK++L++
Sbjct: 1   MAMLVDIDTKTELGFPYWKPIRRRFGPESPFFSSGNIERELLAKQVALDLSEDEKHRLQD 60

Query: 59  MVTEDG-RRVCCPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAH 117
           ++ EDG R V CPIVGC A + SLE FEDHYN RHTASCSVC RVYPTS LLSIHVSEAH
Sbjct: 61  LINEDGSREVVCPIVGCGAHLISLEHFEDHYNGRHTASCSVCSRVYPTSLLLSIHVSEAH 120

Query: 118 DSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFKKAHPSKKQRQ 177
           DSFFQAKVARGY MYECLVEGCGLKFKNYK RQQHLVDKHKFP+SFEFFKKAH SKK RQ
Sbjct: 121 DSFFQAKVARGYAMYECLVEGCGLKFKNYKGRQQHLVDKHKFPSSFEFFKKAHLSKKARQ 180

Query: 178 KNQRKQALQK-KEASSSMEVEDETIDGLVSAVSKLSTSDSTPSSVSFGRRHTRGLTFVPR 236
           K  RKQA+ + +E SS M++E ETIDGLVSAVSKLSTSDS+PSS+SFGRR+TRGLTFVPR
Sbjct: 181 KQHRKQAIHRSEETSSKMDIEGETIDGLVSAVSKLSTSDSSPSSISFGRRNTRGLTFVPR 240

Query: 237 AVHHERKPDS 246
           AV  E++ DS
Sbjct: 241 AVQREKRADS 250

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255536875|ref|XP_002509504.1| zinc finger protein, putative [Ricinus communis] gi|223549403|gb|EEF50891.1| zinc finger protein, putative [Ricinus communis]

 Score =  367 bits (942), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 184/241 (76%), Positives = 207/241 (85%), Gaps = 3/241 (1%)

Query: 1   MAMVLDANF---ESEFPHWASVRRCFRPDSPFFASGNIERELLAKQVALDFSEDEKYQLE 57
           MAMV+D +    E  FP+W  +RR F P+SPFFA GNIERELLAKQ+ALD +EDEK QL+
Sbjct: 1   MAMVVDVDTKGGELGFPYWTPIRRRFGPESPFFAYGNIERELLAKQIALDLTEDEKPQLQ 60

Query: 58  NMVTEDGRRVCCPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAH 117
           N++ ED R V CPIVGC A + SLE+FEDHYNARHTASCSVC RVYPTSRLL IHVSEAH
Sbjct: 61  NLIDEDDREVSCPIVGCGAHLTSLEDFEDHYNARHTASCSVCSRVYPTSRLLGIHVSEAH 120

Query: 118 DSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFKKAHPSKKQRQ 177
           DSFFQAKV RGYPMYECLVEGCGLK  NYKSRQQHLVDKHKFP++FEFFKKAHPSKK RQ
Sbjct: 121 DSFFQAKVERGYPMYECLVEGCGLKLINYKSRQQHLVDKHKFPSAFEFFKKAHPSKKARQ 180

Query: 178 KNQRKQALQKKEASSSMEVEDETIDGLVSAVSKLSTSDSTPSSVSFGRRHTRGLTFVPRA 237
           K++ ++ + K+EA S MEVE ETIDGLVSAVS+LSTSDS+PSS+SFGRRH RGLTFVPRA
Sbjct: 181 KHKHQRVIPKEEAPSKMEVEGETIDGLVSAVSRLSTSDSSPSSISFGRRHNRGLTFVPRA 240

Query: 238 V 238
           V
Sbjct: 241 V 241

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|27808566|gb|AAO24563.1| At5g14140 [Arabidopsis thaliana]

 Score =  354 bits (909), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 173/255 (67%), Positives = 206/255 (80%), Gaps = 8/255 (3%)

Query: 2   AMVLDANFESEFPHWASVRRCFRPDSPFFASGNIERELLAKQVALDFSEDEKYQLENMVT 61
            M +D   E  FP+W  +RR F PDSPFFASGN+ERELLAKQV LDF+EDE   L   V 
Sbjct: 4   GMAVDTVGELRFPYWNPIRRRFPPDSPFFASGNVERELLAKQVTLDFTEDEINHLHKFVE 63

Query: 62  EDGRRVCCPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFF 121
            + RR+ CPIVGC  R++SL+ FEDHYNARHTASCSVC RVYPTSRLLSIH+SEAHDSFF
Sbjct: 64  IETRRISCPIVGCPERLKSLDHFEDHYNARHTASCSVCSRVYPTSRLLSIHISEAHDSFF 123

Query: 122 QAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFKKAHPSKKQRQKNQR 181
           QAKV+RGY MYECLVEGCGLKFK YK+R +HL+DKHKFPT+FEFFKK   SKK+R+K QR
Sbjct: 124 QAKVSRGYDMYECLVEGCGLKFKTYKARHRHLIDKHKFPTTFEFFKKTQLSKKRREKLQR 183

Query: 182 KQAL-----QKKEASSS--MEVEDE-TIDGLVSAVSKLSTSDSTPSSVSFGRRHTRGLTF 233
           +        + KEA+SS  MEVED+ ++DGLVSA+S L+TSD+TPS+VSFGRRH RGLTF
Sbjct: 184 QHVSKLKHEEDKEAASSDAMEVEDKGSLDGLVSALSSLTTSDTTPSNVSFGRRHGRGLTF 243

Query: 234 VPRAVHHERKPDSTS 248
           VPR+VH E++ +S+S
Sbjct: 244 VPRSVHREKRTESSS 258

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334187673|ref|NP_196918.2| nucleic acid binding / zinc ion binding protein [Arabidopsis thaliana] gi|110736663|dbj|BAF00295.1| hypothetical protein [Arabidopsis thaliana] gi|225898911|dbj|BAH30586.1| hypothetical protein [Arabidopsis thaliana] gi|332004609|gb|AED91992.1| nucleic acid binding / zinc ion binding protein [Arabidopsis thaliana]

 Score =  354 bits (908), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 173/255 (67%), Positives = 206/255 (80%), Gaps = 8/255 (3%)

Query: 2   AMVLDANFESEFPHWASVRRCFRPDSPFFASGNIERELLAKQVALDFSEDEKYQLENMVT 61
            M +D   E  FP+W  +RR F PDSPFFASGN+ERELLAKQV LDF+EDE   L   V 
Sbjct: 4   GMAVDTVGELGFPYWNPIRRRFPPDSPFFASGNVERELLAKQVTLDFTEDEINHLHKFVE 63

Query: 62  EDGRRVCCPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFF 121
            + RR+ CPIVGC  R++SL+ FEDHYNARHTASCSVC RVYPTSRLLSIH+SEAHDSFF
Sbjct: 64  IETRRISCPIVGCPERLKSLDHFEDHYNARHTASCSVCSRVYPTSRLLSIHISEAHDSFF 123

Query: 122 QAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFKKAHPSKKQRQKNQR 181
           QAKV+RGY MYECLVEGCGLKFK YK+R +HL+DKHKFPT+FEFFKK   SKK+R+K QR
Sbjct: 124 QAKVSRGYDMYECLVEGCGLKFKTYKARHRHLIDKHKFPTTFEFFKKTQLSKKRREKLQR 183

Query: 182 KQAL-----QKKEASSS--MEVEDE-TIDGLVSAVSKLSTSDSTPSSVSFGRRHTRGLTF 233
           +        + KEA+SS  MEVED+ ++DGLVSA+S L+TSD+TPS+VSFGRRH RGLTF
Sbjct: 184 QHVSKLKHEEDKEAASSDAMEVEDKGSLDGLVSALSSLTTSDTTPSNVSFGRRHGRGLTF 243

Query: 234 VPRAVHHERKPDSTS 248
           VPR+VH E++ +S+S
Sbjct: 244 VPRSVHREKRTESSS 258

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363806800|ref|NP_001242284.1| uncharacterized protein LOC100819557 [Glycine max] gi|255638737|gb|ACU19673.1| unknown [Glycine max]

 Score =  348 bits (892), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 178/255 (69%), Positives = 208/255 (81%), Gaps = 5/255 (1%)

Query: 1   MAMVLDANFESE--FPHWASVRRCFRPDSPFFASGNIERELLAKQVALDFSEDEKYQLEN 58
           MAM ++ N   +  FP W  +RR F P+SPFFA GN+ERELLAKQ+AL+ +E EK QLE 
Sbjct: 1   MAMEVEQNQNHQLGFPFWKPLRRRFGPESPFFAHGNLERELLAKQLALELTE-EKQQLEK 59

Query: 59  -MVTEDGRRVCCPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAH 117
            M  E+GR V CPIVGC AR+ S+E+FE+HYNARHTASCSVC RVYPTS LLSIHVSE H
Sbjct: 60  WMQEEEGREVFCPIVGCGARLTSMEDFENHYNARHTASCSVCSRVYPTSWLLSIHVSEVH 119

Query: 118 DSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFKKAHPSKKQRQ 177
           DSFFQAKVARGY MYECLVE CGLKFK+Y SRQ+HLVDKHKFPTSFEFFKKA PSKK R 
Sbjct: 120 DSFFQAKVARGYDMYECLVERCGLKFKSYNSRQRHLVDKHKFPTSFEFFKKAKPSKKHRL 179

Query: 178 KNQRKQALQKKEASSSMEVEDETIDGLVSAVSKLSTSDSTPSSVSFGRRHTRGLTFVPRA 237
           K+QRKQA+ K+++S  MEVE+ ++D LVSAVSKL+TSDSTPSS+SFGRRH +GL+FVPRA
Sbjct: 180 KSQRKQAVCKEDSSGMMEVENASMDDLVSAVSKLNTSDSTPSSISFGRRH-KGLSFVPRA 238

Query: 238 VHHERKPDSTSMQTK 252
           V      +ST+  TK
Sbjct: 239 VQRGGGSNSTASVTK 253

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9757795|dbj|BAB08293.1| unnamed protein product [Arabidopsis thaliana]

 Score =  345 bits (886), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 168/243 (69%), Positives = 196/243 (80%), Gaps = 8/243 (3%)

Query: 2   AMVLDANFESEFPHWASVRRCFRPDSPFFASGNIERELLAKQVALDFSEDEKYQLENMVT 61
            M +D   E  FP+W  +RR F PDSPFFASGN+ERELLAKQV LDF+EDE   L   V 
Sbjct: 79  GMAVDTVGELGFPYWNPIRRRFPPDSPFFASGNVERELLAKQVTLDFTEDEINHLHKFVE 138

Query: 62  EDGRRVCCPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFF 121
            + RR+ CPIVGC  R++SL+ FEDHYNARHTASCSVC RVYPTSRLLSIH+SEAHDSFF
Sbjct: 139 IETRRISCPIVGCPERLKSLDHFEDHYNARHTASCSVCSRVYPTSRLLSIHISEAHDSFF 198

Query: 122 QAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFKKAHPSKKQRQKNQR 181
           QAKV+RGY MYECLVEGCGLKFK YK+R +HL+DKHKFPT+FEFFKK   SKK+R+K QR
Sbjct: 199 QAKVSRGYDMYECLVEGCGLKFKTYKARHRHLIDKHKFPTTFEFFKKTQLSKKRREKLQR 258

Query: 182 KQAL-----QKKEASSS--MEVEDE-TIDGLVSAVSKLSTSDSTPSSVSFGRRHTRGLTF 233
           +        + KEA+SS  MEVED+ ++DGLVSA+S L+TSD+TPS+VSFGRRH RGLTF
Sbjct: 259 QHVSKLKHEEDKEAASSDAMEVEDKGSLDGLVSALSSLTTSDTTPSNVSFGRRHGRGLTF 318

Query: 234 VPR 236
           VPR
Sbjct: 319 VPR 321

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297807439|ref|XP_002871603.1| hypothetical protein ARALYDRAFT_909371 [Arabidopsis lyrata subsp. lyrata] gi|297317440|gb|EFH47862.1| hypothetical protein ARALYDRAFT_909371 [Arabidopsis lyrata subsp. lyrata]

 Score =  338 bits (868), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 172/256 (67%), Positives = 208/256 (81%), Gaps = 8/256 (3%)

Query: 1   MAMVLDANFESEFPHWASVRRCFRPDSPFFASGNIERELLAKQVALDFSEDEKYQLENMV 60
           M M +D   E  FP+W  +RR F PDSPFFASGN+ERELLAKQVALD ++DE   L+  V
Sbjct: 3   MGMAVDTVGELGFPYWNPIRRRFSPDSPFFASGNVERELLAKQVALDLTQDEINHLQKFV 62

Query: 61  TEDGRRVCCPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSF 120
             + RR+ CPIVGC  R++SL+ FEDHYNARHTASCSVC RVYPTSRLLSIH+SEAHDSF
Sbjct: 63  ETESRRISCPIVGCPERLKSLDHFEDHYNARHTASCSVCSRVYPTSRLLSIHISEAHDSF 122

Query: 121 FQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFKKAHPSKKQRQKNQ 180
           FQAKVARGY MYECLVEGCGLKFK+YK+R +HL+DKHKFP++FEFFKK   SKK+R+K Q
Sbjct: 123 FQAKVARGYDMYECLVEGCGLKFKSYKARHRHLIDKHKFPSTFEFFKKTQLSKKRREKLQ 182

Query: 181 RKQAL-----QKKEASSS--MEVEDE-TIDGLVSAVSKLSTSDSTPSSVSFGRRHTRGLT 232
           R+        + KEA+SS  MEVED+ ++DGLVSA+S L+TSD+TPS+VSFGRRH R LT
Sbjct: 183 RQHVSRLKHEEDKEAASSDAMEVEDKASVDGLVSALSTLTTSDTTPSNVSFGRRHGRVLT 242

Query: 233 FVPRAVHHERKPDSTS 248
           FVPR+VH E++ +S+S
Sbjct: 243 FVPRSVHKEKRTESSS 258

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115485589|ref|NP_001067938.1| Os11g0498400 [Oryza sativa Japonica Group] gi|108864405|gb|ABG22491.1| zinc finger family protein, putative, expressed [Oryza sativa Japonica Group] gi|113645160|dbj|BAF28301.1| Os11g0498400 [Oryza sativa Japonica Group] gi|218185783|gb|EEC68210.1| hypothetical protein OsI_36195 [Oryza sativa Indica Group]

 Score =  309 bits (791), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 155/276 (56%), Positives = 185/276 (67%), Gaps = 45/276 (16%)

Query: 16  WASVRRCFRPDSPFFASGNIERELLAKQVALDFSEDEKYQLENMVTEDGRRVCCPIVGCN 75
           W + RR   PD PFFA+G++ERELLAKQVALD SEDE+YQLE M       + CPI GC 
Sbjct: 29  WLAARRRLAPDDPFFAAGDMERELLAKQVALDLSEDERYQLERMEVASANALLCPISGCG 88

Query: 76  ARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECL 135
           A +  LE FEDHY  RHTASCSVC RVYPTSRLLSIH+SEAHDSFFQAKVARG+PMYECL
Sbjct: 89  AHLDCLENFEDHYRTRHTASCSVCWRVYPTSRLLSIHISEAHDSFFQAKVARGFPMYECL 148

Query: 136 VEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFKKAHPSKKQRQKNQR-KQALQKKEASS-- 192
           VEGCG+K K+YKSRQQHL+DKH+FP SFEFFKKA PS++QR KNQ+ +Q + K + +S  
Sbjct: 149 VEGCGVKLKSYKSRQQHLLDKHQFPKSFEFFKKARPSQRQRNKNQKQRQTVHKGDETSET 208

Query: 193 -----------------------------------------SMEVEDETIDGLVSAVSKL 211
                                                     MEV D+ +D L SAVS+L
Sbjct: 209 LMDVDGKKSSRYMNSRYRPKQHDGKESKENEHSSCKEAKNNEMEV-DKQVDELASAVSRL 267

Query: 212 STSDSTPSSVSFGRRHTRGLTFVPRAVHHERKPDST 247
           ST+DSTPSS+SFG R +RGL FVPR++   ++   T
Sbjct: 268 STADSTPSSISFGHRRSRGLAFVPRSIRQNKQVSQT 303

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	253
ZFIN|ZDB-GENE-030616-621	308	znf511 "zinc finger protein 51	0.541	0.444	0.413	1.4e-25
MGI|MGI:1917002	227	Zfp511 "zinc finger protein 51	0.667	0.744	0.316	2.6e-22
RGD|1308585	250	Zfp511 "zinc finger protein 51	0.656	0.664	0.321	2.6e-22
UNIPROTKB|E1BLM0	255	ZNF511 "Uncharacterized protei	0.537	0.533	0.356	2.4e-21
UNIPROTKB|F1PAC0	213	ZNF511 "Uncharacterized protei	0.501	0.596	0.392	3.9e-21
UNIPROTKB|F1PWD0	212	ZNF511 "Uncharacterized protei	0.501	0.599	0.392	3.9e-21
UNIPROTKB|J9NY49	190	ZNF511 "Uncharacterized protei	0.501	0.668	0.392	3.9e-21
UNIPROTKB|Q8NB15	262	ZNF511 "Zinc finger protein 51	0.537	0.519	0.349	2.7e-20
UNIPROTKB|F1SCV0	258	ZNF511 "Uncharacterized protei	0.541	0.531	0.351	1.2e-19
UNIPROTKB|H7BY64	310	ZNF511 "Zinc finger protein 51	0.387	0.316	0.424	6.5e-19

ZFIN|ZDB-GENE-030616-621 znf511 "zinc finger protein 511" [Danio rerio (taxid:7955)]

 Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 60/145 (41%), Positives = 81/145 (55%)

Query:    23 FRPDSPFFASGNIERELLAKQVALDFSEDEKYQLENMVTEDGRRVCCPIVGCNARMRSLE 82
             F  +  +F  G+I R +  + +   F +D++      ++E      C I GC     +LE
Sbjct:    59 FAVEDEYFEDGDINRHMYLQNIVTSFVDDKQ---PPTISE----FRCHIAGCKQLFDTLE 111

Query:    83 EFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLK 142
              +E HYNA H   CS C R +P++RLL IH+ E HDS FQ  +A    MYECLVEGCGLK
Sbjct:   112 GYEHHYNALHRNVCSNCKRSFPSNRLLEIHILEWHDSLFQI-MAEKQCMYECLVEGCGLK 170

Query:   143 FKNYKSRQQHLVDKHKFPTSFEFFK 167
             FK  K R+ HL+  H +P  F F K
Sbjct:   171 FKTSKERKDHLIRTHSYPADFRFDK 195

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

MGI|MGI:1917002 Zfp511 "zinc finger protein 511" [Mus musculus (taxid:10090)]

 Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
 Identities = 56/177 (31%), Positives = 86/177 (48%)

Query:    23 FRPDSPFFASGNIERELLAKQVALDFSEDEKYQLENMVTEDGRRVCCPIVGCNARMRSLE 82
             F  D  FF  G+++R L  + +    SE  +   ++MV E      C + GC     ++E
Sbjct:    43 FPRDHEFFEDGDVQRHLYLQDMLTQVSETPE---KSMVPE----FTCQVAGCCQVFAAIE 95

Query:    83 EFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLK 142
             +++ HY+  H  +CS C R +P+  LL +H+ E HDS FQ  +A+   MY+CLVE C  K
Sbjct:    96 DYQHHYHMMHGNTCSFCNRAFPSGHLLDVHILEWHDSLFQI-LAQRQDMYQCLVESCPEK 154

Query:   143 FKNYKSRQQHLVDKHKFPTSFEFFKKAHPSXXXXXXXXXXXXXXXXEASSSMEVEDE 199
             FK  + R+ H+V  H +P  F F K                     + S +ME+  E
Sbjct:   155 FKTSQDRKDHMVRLHLYPADFRFDKPKTNRGPAMPAAADAATRAPTDDSDAMEICSE 211

GO:0003677 "DNA binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

RGD|1308585 Zfp511 "zinc finger protein 511" [Rattus norvegicus (taxid:10116)]

 Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
 Identities = 56/174 (32%), Positives = 85/174 (48%)

Query:    23 FRPDSPFFASGNIERELLAKQVALDFSEDEKYQLENMVTEDGRRVCCPIVGCNARMRSLE 82
             F  D  FF  G+++R L  + +    SE  +   ++MV E      C + GC     ++E
Sbjct:    43 FPRDHEFFEDGDVQRHLYLQDMLTQVSETPE---KSMVPE----FTCQVAGCCQVFAAIE 95

Query:    83 EFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLK 142
             +++ HY+  H  +CS C R +P+  LL +H+ E HDS FQ  +A+   MY+CLVE C  K
Sbjct:    96 DYQHHYHMMHGNTCSFCNRAFPSGHLLDVHILEWHDSLFQI-LAQRQDMYQCLVESCPEK 154

Query:   143 FKNYKSRQQHLVDKHKFPTSFEFFKKAHPSXXXXXXXXXXXXXXXXEASSSMEV 196
             FK  + R+ H+V  H +P  F F K                     + S +MEV
Sbjct:   155 FKTSQDRKDHMVRLHLYPADFRFDKPKTNRGPAMPAAADTAARALRDDSDAMEV 208

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E1BLM0 ZNF511 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
 Identities = 52/146 (35%), Positives = 76/146 (52%)

Query:    23 FRPDSPFFASGNIERELLAKQVALDFS-EDEKYQLENMVTEDGRRVCCPIVGCNARMRSL 81
             F  +  FF  G+++R L  + V    + E E+ ++            C + GC     +L
Sbjct:    43 FPREHEFFEDGDVQRHLYLQDVITQVAAEPERPRVPEFT--------CQVAGCCQAFDTL 94

Query:    82 EEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGL 141
             E++E HY+  H   CS C R +P+  LL  H+ E HDS FQ  +A    MY+CLVEGC  
Sbjct:    95 EDYEHHYHTLHGNVCSSCKRAFPSGHLLDTHIQEWHDSLFQI-LAERQDMYQCLVEGCTE 153

Query:   142 KFKNYKSRQQHLVDKHKFPTSFEFFK 167
             KF+  + R++HLV  H +P  F F K
Sbjct:   154 KFRTSRDRKEHLVTHHLYPADFRFDK 179

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1PAC0 ZNF511 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 53/135 (39%), Positives = 72/135 (53%)

Query:    33 GNIERELLAKQVALDFSEDEKYQLENMVTEDGRRVCCPIVGCNARMRSLEEFEDHYNARH 92
             G+++R L  + V    +E+ +      V E      C + GC     SLE++E HY+  H
Sbjct:     4 GDVQRHLYLQDVLTQVAEEPE---RPRVPE----FTCQVAGCCQVFDSLEDYEHHYHTLH 56

Query:    93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQH 152
                CS C R +P+  LL +H+ E HDS FQ    R   MY+CLVEGC  KFK  K R+ H
Sbjct:    57 RNVCSFCRRSFPSLHLLDVHILEWHDSLFQILSER-QDMYQCLVEGCAEKFKTSKDRKDH 115

Query:   153 LVDKHKFPTSFEFFK 167
             LV +H +P  F F K
Sbjct:   116 LVRRHLYPADFRFDK 130

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|F1PWD0 ZNF511 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 53/135 (39%), Positives = 72/135 (53%)

Query:    33 GNIERELLAKQVALDFSEDEKYQLENMVTEDGRRVCCPIVGCNARMRSLEEFEDHYNARH 92
             G+++R L  + V    +E+ +      V E      C + GC     SLE++E HY+  H
Sbjct:     4 GDVQRHLYLQDVLTQVAEEPE---RPRVPE----FTCQVAGCCQVFDSLEDYEHHYHTLH 56

Query:    93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQH 152
                CS C R +P+  LL +H+ E HDS FQ    R   MY+CLVEGC  KFK  K R+ H
Sbjct:    57 RNVCSFCRRSFPSLHLLDVHILEWHDSLFQILSER-QDMYQCLVEGCAEKFKTSKDRKDH 115

Query:   153 LVDKHKFPTSFEFFK 167
             LV +H +P  F F K
Sbjct:   116 LVRRHLYPADFRFDK 130

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|J9NY49 ZNF511 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 53/135 (39%), Positives = 72/135 (53%)

Query:    33 GNIERELLAKQVALDFSEDEKYQLENMVTEDGRRVCCPIVGCNARMRSLEEFEDHYNARH 92
             G+++R L  + V    +E+ +      V E      C + GC     SLE++E HY+  H
Sbjct:    45 GDVQRHLYLQDVLTQVAEEPE---RPRVPE----FTCQVAGCCQVFDSLEDYEHHYHTLH 97

Query:    93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQH 152
                CS C R +P+  LL +H+ E HDS FQ    R   MY+CLVEGC  KFK  K R+ H
Sbjct:    98 RNVCSFCRRSFPSLHLLDVHILEWHDSLFQILSER-QDMYQCLVEGCAEKFKTSKDRKDH 156

Query:   153 LVDKHKFPTSFEFFK 167
             LV +H +P  F F K
Sbjct:   157 LVRRHLYPADFRFDK 171

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|Q8NB15 ZNF511 "Zinc finger protein 511" [Homo sapiens (taxid:9606)]

 Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
 Identities = 51/146 (34%), Positives = 75/146 (51%)

Query:    23 FRPDSPFFASGNIERELLAKQVALDFSE-DEKYQLENMVTEDGRRVCCPIVGCNARMRSL 81
             F  +  FF  G+++R L  + V +  ++  EK ++            C + GC     +L
Sbjct:    43 FPREHQFFEDGDVQRHLYLQDVIMQVADVPEKPRVPAFA--------CQVAGCCQVFDAL 94

Query:    82 EEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGL 141
             +++E HY+  H   CS C R +P+  LL  H+ E HDS FQ    R   MY+CLVEGC  
Sbjct:    95 DDYEHHYHTLHGNVCSFCKRAFPSGHLLDAHILEWHDSLFQILSER-QDMYQCLVEGCTE 153

Query:   142 KFKNYKSRQQHLVDKHKFPTSFEFFK 167
             KFK  + R+ H+V  H +P  F F K
Sbjct:   154 KFKTSRDRKDHMVRMHLYPADFRFDK 179

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1SCV0 ZNF511 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 51/145 (35%), Positives = 73/145 (50%)

Query:    23 FRPDSPFFASGNIERELLAKQVALDFSEDEKYQLENMVTEDGRRVCCPIVGCNARMRSLE 82
             F  +  FF  G+++R L  + V    +   +      V E      C + GC      LE
Sbjct:    43 FPREHEFFEDGDVQRHLYLQDVLTQVAGAPE---RPRVPE----FTCHVAGCCQVFDVLE 95

Query:    83 EFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLK 142
             ++E HY+  H   CS C R +P+  LL  H+ E HDS FQ  +A    MY+CLVEGC  +
Sbjct:    96 DYEHHYHTLHRNVCSFCKRAFPSGHLLDTHILEWHDSLFQI-LAERQDMYQCLVEGCPER 154

Query:   143 FKNYKSRQQHLVDKHKFPTSFEFFK 167
             F+  + R++HLV  H +P  F F K
Sbjct:   155 FRTSRDRKEHLVTGHLYPADFRFDK 179

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|H7BY64 ZNF511 "Zinc finger protein 511" [Homo sapiens (taxid:9606)]

 Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
 Identities = 42/99 (42%), Positives = 56/99 (56%)

Query:    69 CPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARG 128
             C + GC     +L+++E HY+  H   CS C R +P+  LL  H+ E HDS FQ    R 
Sbjct:    17 CQVAGCCQVFDALDDYEHHYHTLHGNVCSFCKRAFPSGHLLDAHILEWHDSLFQILSER- 75

Query:   129 YPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK 167
               MY+CLVEGC  KFK  + R+ H+V  H +P  F F K
Sbjct:    76 QDMYQCLVEGCTEKFKTSRDRKDHMVRMHLYPADFRFDK 114

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	253
KOG4173	253	consensus Alpha-SNAP protein [Intracellular traffi	100.0
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.63
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.22
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.08
KOG3576	267	consensus Ovo and related transcription factors [T	99.05
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.0
KOG3576	267	consensus Ovo and related transcription factors [T	98.92
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.85
KOG3608	467	consensus Zn finger proteins [General function pre	98.66
KOG3608	467	consensus Zn finger proteins [General function pre	98.54
PHA00733	128	hypothetical protein	98.53
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.42
PHA00733	128	hypothetical protein	98.24
PHA02768	55	hypothetical protein; Provisional	98.11
KOG3993	500	consensus Transcription factor (contains Zn finger	98.06
PHA02768	55	hypothetical protein; Provisional	98.03
PLN03086	567	PRLI-interacting factor K; Provisional	97.88
PHA00732	79	hypothetical protein	97.8
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.72
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.62
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.58
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	97.56
PHA00732	79	hypothetical protein	97.41
PLN03086	567	PRLI-interacting factor K; Provisional	97.29
PHA00616	44	hypothetical protein	97.17
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.04
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	96.96
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.87
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.85
PHA00616	44	hypothetical protein	96.77
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	96.69
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.42
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	95.91
KOG3993	500	consensus Transcription factor (contains Zn finger	95.88
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	95.86
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	95.44
smart00355	26	ZnF_C2H2 zinc finger.	94.34
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	94.3
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	93.72
smart00355	26	ZnF_C2H2 zinc finger.	93.61
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	92.8
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	92.69
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	91.99
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	91.96
KOG1146	1406	consensus Homeobox protein [General function predi	91.53
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	91.19
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	90.28
COG5236	493	Uncharacterized conserved protein, contains RING Z	89.92
PRK04860	160	hypothetical protein; Provisional	88.81
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	87.08
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	85.4
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	84.74
COG5048	467	FOG: Zn-finger [General function prediction only]	84.37
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	84.07
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	81.63
KOG2893	341	consensus Zn finger protein [General function pred	81.51
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	80.92
COG5048	467	FOG: Zn-finger [General function prediction only]	80.09
COG4049	65	Uncharacterized protein containing archaeal-type C	80.06

>KOG4173 consensus Alpha-SNAP protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=1.4e-49  Score=345.84  Aligned_cols=205  Identities=33%  Similarity=0.606  Sum_probs=178.6

Q ss_pred             ccccCCCCCCccCCCchhHHHHHHHhhccchhHHhhhhccccCCCcceEecCCCCCcccCChhHHHhhHhCcCcccCCCC
Q 025436           20 RRCFRPDSPFFASGNIERELLAKQVALDFSEDEKYQLENMVTEDGRRVCCPIVGCNARMRSLEEFEDHYNARHTASCSVC   99 (253)
Q Consensus        20 ~~~~~~~~~ff~~g~~~r~~~~k~~~~~~~~~~~~~~~~~~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H~~~Cs~C   99 (253)
                      .+||||++|||++|||+||||+|||++|+++.+       +....+.|.|+++||.+.|.++.+++.||++.|+++|++|
T Consensus        40 pvrfp~~~pFf~~G~v~r~l~~~~V~~d~~d~~-------~~~~~~~~~cqvagc~~~~d~lD~~E~hY~~~h~~sCs~C  112 (253)
T KOG4173|consen   40 PVRFPREHPFFEDGDVQRHLYLQDVIMDVADVP-------EKPRVPAFACQVAGCCQVFDALDDYEHHYHTLHGNSCSFC  112 (253)
T ss_pred             cccCCCcCcchhcccHHHHHhHhhheeeccccc-------cccccccccccccchHHHHhhhhhHHHhhhhcccchhHHH
Confidence            467999999999999999999999999998875       3455678999999999999999999999999999999999


Q ss_pred             CccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccccCCCcHHHHhhh
Q 025436          100 CRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFKKAHPSKKQRQKN  179 (253)
Q Consensus       100 ~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~~~~~~~~~r~k~  179 (253)
                      .+.||+.++|++||.||||+||++++.+|..||+|+||||+.+|+|+..|++|||+.|+||.+|+||++++    +|.+.
T Consensus       113 ~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KFkT~r~RkdH~I~~Hk~Pa~frFdk~Kk----rr~~~  188 (253)
T KOG4173|consen  113 KRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKFKTSRDRKDHMIRMHKYPADFRFDKPKK----RRSPA  188 (253)
T ss_pred             HHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhhhhhhhhhhHHHHhccCCcceeecCccc----ccChh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999743    33333


Q ss_pred             HHHHHhh-h-cccCCCccccccccccccc------ccccCCCCCCCCC-eeeecCCCCCcccccc
Q 025436          180 QRKQALQ-K-KEASSSMEVEDETIDGLVS------AVSKLSTSDSTPS-SVSFGRRHTRGLTFVP  235 (253)
Q Consensus       180 ~~~~~~~-~-~~~~~~mev~~~~~~~~~~------~~~~~~~s~~~p~-~~~fG~~~~r~~~~~p  235 (253)
                      ++.+... . |+.+++||++++.+++.+|      +.+.+++|+..|+ +|.||++.+++++|||
T Consensus       189 ~~~~~~~~~~e~d~ea~e~~s~pv~~~~s~~G~~~~~s~~t~sd~~~~~~v~~~~~~~~a~~~i~  253 (253)
T KOG4173|consen  189 SAEAPGDSGEESDGEAMEICSEPVAASPSPAGERRIYSHRTGSDQRSGKTVDRGQAMKEAITDIL  253 (253)
T ss_pred             hhcCCCCcccchhhhHHhhcccchhccCCCcchhhhhhcccccccccCccHHHHHHhhhhhhccC
Confidence            3333222 2 5577788887765554444      4567778888888 9999999999999986

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.63  E-value=2.1e-16  Score=143.40  Aligned_cols=89  Identities=20%  Similarity=0.459  Sum_probs=79.8

Q ss_pred             CcceEecCCCCCcccCChhHHHhhHhCcCc--ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCC
Q 025436           64 GRRVCCPIVGCNARMRSLEEFEDHYNARHT--ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGL  141 (253)
Q Consensus        64 ~k~f~C~~~gC~k~F~s~~~L~~H~~~~H~--~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~k  141 (253)
                      .+.++|..  |+|.|.+...|+.|+++ |+  +.|.+|||.|...++|+-||+          .|+|||||+|.+  |++
T Consensus       159 ~ka~~C~~--C~K~YvSmpALkMHirT-H~l~c~C~iCGKaFSRPWLLQGHiR----------THTGEKPF~C~h--C~k  223 (279)
T KOG2462|consen  159 KKAFSCKY--CGKVYVSMPALKMHIRT-HTLPCECGICGKAFSRPWLLQGHIR----------THTGEKPFSCPH--CGK  223 (279)
T ss_pred             cccccCCC--CCceeeehHHHhhHhhc-cCCCcccccccccccchHHhhcccc----------cccCCCCccCCc--ccc
Confidence            46788977  99999999999999986 64  889999999999999999998          489999999977  999


Q ss_pred             cCCChhHHHhHHhhhcCCCCccccccc
Q 025436          142 KFKNYKSRQQHLVDKHKFPTSFEFFKK  168 (253)
Q Consensus       142 kF~t~~~rk~Hl~~~H~~p~~f~f~~~  168 (253)
                      .|+..++|+-||. +|..-|+|.|..=
T Consensus       224 AFADRSNLRAHmQ-THS~~K~~qC~~C  249 (279)
T KOG2462|consen  224 AFADRSNLRAHMQ-THSDVKKHQCPRC  249 (279)
T ss_pred             hhcchHHHHHHHH-hhcCCccccCcch
Confidence            9999999999994 8999999999763

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.22  E-value=3.9e-12  Score=115.79  Aligned_cols=84  Identities=20%  Similarity=0.351  Sum_probs=75.0

Q ss_pred             hhccccCCCcceEecCCCCCcccCChhHHHhhHhCcCc----ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCc
Q 025436           56 LENMVTEDGRRVCCPIVGCNARMRSLEEFEDHYNARHT----ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPM  131 (253)
Q Consensus        56 ~~~~~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H~----~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~  131 (253)
                      |.-++.++.-++.|.+  |||.|+..+-|+-|+++ |+    |.|..|+|+|....+|..||++          |.+.+.
T Consensus       177 LkMHirTH~l~c~C~i--CGKaFSRPWLLQGHiRT-HTGEKPF~C~hC~kAFADRSNLRAHmQT----------HS~~K~  243 (279)
T KOG2462|consen  177 LKMHIRTHTLPCECGI--CGKAFSRPWLLQGHIRT-HTGEKPFSCPHCGKAFADRSNLRAHMQT----------HSDVKK  243 (279)
T ss_pred             HhhHhhccCCCccccc--ccccccchHHhhccccc-ccCCCCccCCcccchhcchHHHHHHHHh----------hcCCcc
Confidence            4445667778999998  99999999999999986 64    9999999999999999999985          677889


Q ss_pred             eecCccccCCcCCChhHHHhHHh
Q 025436          132 YECLVEGCGLKFKNYKSRQQHLV  154 (253)
Q Consensus       132 y~C~vegC~kkF~t~~~rk~Hl~  154 (253)
                      |+|..  |+|.|+..+.|.+|+-
T Consensus       244 ~qC~~--C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  244 HQCPR--CGKSFALKSYLNKHSE  264 (279)
T ss_pred             ccCcc--hhhHHHHHHHHHHhhh
Confidence            99977  9999999999999984

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.08  E-value=3.7e-11  Score=120.70  Aligned_cols=92  Identities=20%  Similarity=0.429  Sum_probs=75.9

Q ss_pred             hhccchhHHhhhhccccCCCcceEecCCCCCcccCChhHHHhhHhCcC----------------cccCCCCCccCCCchh
Q 025436           45 ALDFSEDEKYQLENMVTEDGRRVCCPIVGCNARMRSLEEFEDHYNARH----------------TASCSVCCRVYPTSRL  108 (253)
Q Consensus        45 ~~~~~~~~~~~~~~~~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H----------------~~~Cs~C~ksF~s~~~  108 (253)
                      +.++.++..+    .-...+..|.|.+  |..+|+....|++||.++.                .|.|++|||+|.-+++
T Consensus       223 ltslkeHiky----rhekne~nfsC~l--CsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKAFKfKHH  296 (1007)
T KOG3623|consen  223 LTSLKEHIKY----RHEKNEPNFSCML--CSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKAFKFKHH  296 (1007)
T ss_pred             HHHHHHHHHH----HHhhCCCCCcchh--hhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchhhhhHHH
Confidence            3455555543    2223456799999  9999999999999997421                2999999999999999


Q ss_pred             hhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHh
Q 025436          109 LSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLV  154 (253)
Q Consensus       109 L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~  154 (253)
                      |+.|++          +|.||+||.|+-  |+|+|+.+.....||-
T Consensus       297 LKEHlR----------IHSGEKPfeCpn--CkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  297 LKEHLR----------IHSGEKPFECPN--CKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             HHhhhe----------eecCCCCcCCcc--cccccccCCccccccc
Confidence            999998          478999999966  9999999999999985

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.05  E-value=4.4e-11  Score=105.53  Aligned_cols=89  Identities=20%  Similarity=0.451  Sum_probs=79.6

Q ss_pred             CCcceEecCCCCCcccCChhHHHhhHhCcC----cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccc
Q 025436           63 DGRRVCCPIVGCNARMRSLEEFEDHYNARH----TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEG  138 (253)
Q Consensus        63 ~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H----~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~veg  138 (253)
                      +...|.|.+  |+|.|.-..-|.+|+.- |    +|-|..|||.|...-.|++|+++          |+|.+||+|.+  
T Consensus       114 d~d~ftCrv--CgK~F~lQRmlnrh~kc-h~~vkr~lct~cgkgfndtfdlkrh~rt----------htgvrpykc~~--  178 (267)
T KOG3576|consen  114 DQDSFTCRV--CGKKFGLQRMLNRHLKC-HSDVKRHLCTFCGKGFNDTFDLKRHTRT----------HTGVRPYKCSL--  178 (267)
T ss_pred             CCCeeeeeh--hhhhhhHHHHHHHHhhh-ccHHHHHHHhhccCcccchhhhhhhhcc----------ccCccccchhh--
Confidence            345799999  99999999999999964 5    49999999999999999999974          78999999977  


Q ss_pred             cCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          139 CGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       139 C~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      |++.|+..-.|..|+..+|+.+..|-+-
T Consensus       179 c~kaftqrcsleshl~kvhgv~~~yayk  206 (267)
T KOG3576|consen  179 CEKAFTQRCSLESHLKKVHGVQHQYAYK  206 (267)
T ss_pred             hhHHHHhhccHHHHHHHHcCchHHHHHH
Confidence            9999999999999999999988877664

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.00  E-value=6.9e-11  Score=118.83  Aligned_cols=78  Identities=19%  Similarity=0.448  Sum_probs=70.5

Q ss_pred             CCCcceEecCCCCCcccCChhHHHhhHhCcCc----ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCcc
Q 025436           62 EDGRRVCCPIVGCNARMRSLEEFEDHYNARHT----ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVE  137 (253)
Q Consensus        62 ~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H~----~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~ve  137 (253)
                      +.+..|.|..  |+|+|.....|.+|.- .|+    |.|.+|.|+|..+++|..|++          .|.||+||+|.- 
T Consensus       890 te~gmyaCDq--CDK~FqKqSSLaRHKY-EHsGqRPyqC~iCkKAFKHKHHLtEHkR----------LHSGEKPfQCdK-  955 (1007)
T KOG3623|consen  890 TEDGMYACDQ--CDKAFQKQSSLARHKY-EHSGQRPYQCIICKKAFKHKHHLTEHKR----------LHSGEKPFQCDK-  955 (1007)
T ss_pred             CccccchHHH--HHHHHHhhHHHHHhhh-hhcCCCCcccchhhHhhhhhhhhhhhhh----------hccCCCcchhhh-
Confidence            3456899999  9999999999999973 453    999999999999999999997          589999999977 


Q ss_pred             ccCCcCCChhHHHhHHh
Q 025436          138 GCGLKFKNYKSRQQHLV  154 (253)
Q Consensus       138 gC~kkF~t~~~rk~Hl~  154 (253)
                       |+|+|+.+.....||-
T Consensus       956 -ClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  956 -CLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             -hhhhcccccchHhhhc
Confidence             9999999999999983

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=98.92  E-value=3.8e-10  Score=99.63  Aligned_cols=95  Identities=24%  Similarity=0.480  Sum_probs=82.6

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhCcCc----ccCCCCCccCCCchhhhhhhhhhcchh--hhhhhhcCCCcee
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNARHT----ASCSVCCRVYPTSRLLSIHVSEAHDSF--FQAKVARGYPMYE  133 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H~----~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~--f~~~~h~gek~y~  133 (253)
                      .|...+.+-|..  ||+.|....+|++|+++ |+    |.|+.|+|+|+....|+.|+...|...  ++. ..++.++|.
T Consensus       139 ch~~vkr~lct~--cgkgfndtfdlkrh~rt-htgvrpykc~~c~kaftqrcsleshl~kvhgv~~~yay-kerr~kl~v  214 (267)
T KOG3576|consen  139 CHSDVKRHLCTF--CGKGFNDTFDLKRHTRT-HTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAY-KERRAKLYV  214 (267)
T ss_pred             hccHHHHHHHhh--ccCcccchhhhhhhhcc-ccCccccchhhhhHHHHhhccHHHHHHHHcCchHHHHH-HHhhhheee
Confidence            688889999988  99999999999999986 53    999999999999999999999998642  222 366789999


Q ss_pred             cCccccCCcCCChhHHHhHHhhhcCCC
Q 025436          134 CLVEGCGLKFKNYKSRQQHLVDKHKFP  160 (253)
Q Consensus       134 C~vegC~kkF~t~~~rk~Hl~~~H~~p  160 (253)
                      |  |+||..-......-.|+..+|-+.
T Consensus       215 c--edcg~t~~~~e~~~~h~~~~hp~S  239 (267)
T KOG3576|consen  215 C--EDCGYTSERPEVYYLHLKLHHPFS  239 (267)
T ss_pred             e--cccCCCCCChhHHHHHHHhcCCCC
Confidence            9  889999999999999998877553

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.85  E-value=9.6e-10  Score=111.99  Aligned_cols=54  Identities=26%  Similarity=0.567  Sum_probs=38.1

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHhhhcCCC
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFP  160 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p  160 (253)
                      +.|-+|.|+..-+..|+.|++          .|+||+||+|-|  ||+.|+++.+||.||. +|+.-
T Consensus       606 NqCiiC~rVlSC~saLqmHyr----------tHtGERPFkCKi--CgRAFtTkGNLkaH~~-vHka~  659 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYR----------THTGERPFKCKI--CGRAFTTKGNLKAHMS-VHKAK  659 (958)
T ss_pred             cceeeeeecccchhhhhhhhh----------cccCcCcccccc--ccchhccccchhhccc-ccccC
Confidence            455555555555555555554          478888888877  8888888888888884 67643

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=98.66  E-value=6.5e-09  Score=97.96  Aligned_cols=102  Identities=19%  Similarity=0.397  Sum_probs=66.8

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhCc-----CcccCCCCCccCCCchhhhhhhhhhcchhh-----------h-
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNAR-----HTASCSVCCRVYPTSRLLSIHVSEAHDSFF-----------Q-  122 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~-----H~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f-----------~-  122 (253)
                      .|++++...|+.  ||.-|++...|-.|++..     -.|.|..|.|.|.+..+|..|+..+=..+-           + 
T Consensus       201 ~Hs~eKvvACp~--Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykCplCdmtc~~~ss  278 (467)
T KOG3608|consen  201 THSNEKVVACPH--CGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNCYKCPLCDMTCSSASS  278 (467)
T ss_pred             hcCCCeEEecch--HHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhcccccccccCCCChHH
Confidence            467788888876  888888888888887532     137777777777777777777754222110           0 


Q ss_pred             ----h-hhhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          123 ----A-KVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       123 ----~-~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                          + -.|.+.+||+|.-  |+++|.+-++|.+|+. .|. ..-|.|+-
T Consensus       279 L~~H~r~rHs~dkpfKCd~--Cd~~c~~esdL~kH~~-~HS-~~~y~C~h  324 (467)
T KOG3608|consen  279 LTTHIRYRHSKDKPFKCDE--CDTRCVRESDLAKHVQ-VHS-KTVYQCEH  324 (467)
T ss_pred             HHHHHHhhhccCCCccccc--hhhhhccHHHHHHHHH-hcc-ccceecCC
Confidence                0 1355677888844  8888888888888875 666 44455554

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=98.54  E-value=4.4e-08  Score=92.49  Aligned_cols=83  Identities=23%  Similarity=0.496  Sum_probs=48.9

Q ss_pred             CCCcceEecCCCCCcccCChhHHHhhHhCcCc----ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCcc
Q 025436           62 EDGRRVCCPIVGCNARMRSLEEFEDHYNARHT----ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVE  137 (253)
Q Consensus        62 ~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H~----~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~ve  137 (253)
                      ....-|.|++  |+.+......|..|++..|.    |.|+.|++.|.+...|..|+.. |         . +.+|+|..+
T Consensus       259 rHvn~ykCpl--Cdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~-H---------S-~~~y~C~h~  325 (467)
T KOG3608|consen  259 RHVNCYKCPL--CDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQV-H---------S-KTVYQCEHP  325 (467)
T ss_pred             Hhhhcccccc--cccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHh-c---------c-ccceecCCC
Confidence            3445577766  77777777777777766553    7777777777777777777652 2         1 334444444


Q ss_pred             ccCCcCCChhHHHhHHhhhc
Q 025436          138 GCGLKFKNYKSRQQHLVDKH  157 (253)
Q Consensus       138 gC~kkF~t~~~rk~Hl~~~H  157 (253)
                      +|..+|.+...+++|++.+|
T Consensus       326 ~C~~s~r~~~q~~~H~~evh  345 (467)
T KOG3608|consen  326 DCHYSVRTYTQMRRHFLEVH  345 (467)
T ss_pred             CCcHHHHHHHHHHHHHHHhc
Confidence            44444444444444444444

>PHA00733 hypothetical protein

Probab=98.53  E-value=6.3e-08  Score=79.68  Aligned_cols=80  Identities=20%  Similarity=0.405  Sum_probs=67.0

Q ss_pred             CcceEecCCCCCcccCChhHHHhh--Hh---CcC---cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecC
Q 025436           64 GRRVCCPIVGCNARMRSLEEFEDH--YN---ARH---TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECL  135 (253)
Q Consensus        64 ~k~f~C~~~gC~k~F~s~~~L~~H--~~---~~H---~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~  135 (253)
                      .+++.|.+  |.+.|.....|..|  +.   ..+   .|.|..|++.|.+...|..|++.          +  ..+|.|.
T Consensus        38 ~~~~~~~~--~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~----------h--~~~~~C~  103 (128)
T PHA00733         38 QKRLIRAV--VKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRY----------T--EHSKVCP  103 (128)
T ss_pred             hhhHHHHH--HhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhc----------C--CcCccCC
Confidence            47899998  99999998888887  21   112   49999999999999999999963          2  3469997


Q ss_pred             ccccCCcCCChhHHHhHHhhhcCC
Q 025436          136 VEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       136 vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      +  |++.|.....|++|+...|+.
T Consensus       104 ~--CgK~F~~~~sL~~H~~~~h~~  125 (128)
T PHA00733        104 V--CGKEFRNTDSTLDHVCKKHNI  125 (128)
T ss_pred             C--CCCccCCHHHHHHHHHHhcCc
Confidence            7  999999999999999988874

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.42  E-value=8.1e-08  Score=98.23  Aligned_cols=88  Identities=26%  Similarity=0.471  Sum_probs=72.8

Q ss_pred             cccCCCcceEecCCCCCcccCChhHHHhhHhCcCc----ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceec
Q 025436           59 MVTEDGRRVCCPIVGCNARMRSLEEFEDHYNARHT----ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYEC  134 (253)
Q Consensus        59 ~~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H~----~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C  134 (253)
                      .+.....|-+|-+  |-+..+....|+.||++ |+    |+|.+||++|.++-+|+.|+.. |..     .+.-.-.|+|
T Consensus       598 ~~~~~TdPNqCii--C~rVlSC~saLqmHyrt-HtGERPFkCKiCgRAFtTkGNLkaH~~v-Hka-----~p~~R~q~Sc  668 (958)
T KOG1074|consen  598 SENKRTDPNQCII--CLRVLSCPSALQMHYRT-HTGERPFKCKICGRAFTTKGNLKAHMSV-HKA-----KPPARVQFSC  668 (958)
T ss_pred             cccccCCccceee--eeecccchhhhhhhhhc-ccCcCccccccccchhccccchhhcccc-ccc-----CccccccccC
Confidence            3444566889988  99999999999999986 64    9999999999999999999974 421     1222356999


Q ss_pred             C---ccccCCcCCChhHHHhHHhhhcC
Q 025436          135 L---VEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       135 ~---vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      +   |  |-++|++.-.+..|++ +|.
T Consensus       669 P~~~i--c~~kftn~V~lpQhIr-iH~  692 (958)
T KOG1074|consen  669 PSTFI--CQKKFTNAVTLPQHIR-IHL  692 (958)
T ss_pred             Cchhh--hcccccccccccceEE-eec
Confidence            9   8  9999999999999974 776

>PHA00733 hypothetical protein

Probab=98.24  E-value=1.1e-06  Score=72.28  Aligned_cols=56  Identities=21%  Similarity=0.465  Sum_probs=49.9

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhC-cCcccCCCCCccCCCchhhhhhhhhhc
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNA-RHTASCSVCCRVYPTSRLLSIHVSEAH  117 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~-~H~~~Cs~C~ksF~s~~~L~~Hi~e~H  117 (253)
                      .+.+.+||.|..  |++.|.+...|..|++. .+.+.|.+|++.|.....|..|+.+.|
T Consensus        67 ~~~~~kPy~C~~--Cgk~Fss~s~L~~H~r~h~~~~~C~~CgK~F~~~~sL~~H~~~~h  123 (128)
T PHA00733         67 TSKAVSPYVCPL--CLMPFSSSVSLKQHIRYTEHSKVCPVCGKEFRNTDSTLDHVCKKH  123 (128)
T ss_pred             ccCCCCCccCCC--CCCcCCCHHHHHHHHhcCCcCccCCCCCCccCCHHHHHHHHHHhc
Confidence            445688999988  99999999999999974 357999999999999999999998766

>PHA02768 hypothetical protein; Provisional

Probab=98.11  E-value=1.4e-06  Score=62.00  Aligned_cols=21  Identities=19%  Similarity=0.631  Sum_probs=10.8

Q ss_pred             ccCCCCCccCCCchhhhhhhh
Q 025436           94 ASCSVCCRVYPTSRLLSIHVS  114 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~  114 (253)
                      |.|+.||+.|.....|..|++
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r   26 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLR   26 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHH
Confidence            445555555555555555554

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.06  E-value=1.2e-06  Score=84.31  Aligned_cols=94  Identities=19%  Similarity=0.391  Sum_probs=74.2

Q ss_pred             CCCcceEecCCCCCcccCChhHHHhhH--hCcC-cccCCCCCccCCCchhhhhhhhhhcchhhhhh--------------
Q 025436           62 EDGRRVCCPIVGCNARMRSLEEFEDHY--NARH-TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAK--------------  124 (253)
Q Consensus        62 ~~~k~f~C~~~gC~k~F~s~~~L~~H~--~~~H-~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~--------------  124 (253)
                      +....|.|.+  |...|.....|-+|.  ++.| .|.|.+|+|.|.-..+|-.|.+ ||.+--.+.              
T Consensus       263 n~iGdyiCqL--CK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRR-WHKPR~eaa~a~~~P~k~~~~~r  339 (500)
T KOG3993|consen  263 NVIGDYICQL--CKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRR-WHKPRPEAAKAGSPPPKQAVETR  339 (500)
T ss_pred             ccHHHHHHHH--HHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhc-ccCCchhhhhcCCCChhhhhhhh
Confidence            3456799999  999999999999996  2345 4999999999999999999985 887621110              


Q ss_pred             ----h------hcCCCceecCccccCCcCCChhHHHhHHhhhcCCC
Q 025436          125 ----V------ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFP  160 (253)
Q Consensus       125 ----~------h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p  160 (253)
                          .      +..+..|.|.+  |+++|.+...|+.|+..+|.-+
T Consensus       340 ae~~ea~rsg~dss~gi~~C~~--C~KkFrRqAYLrKHqlthq~~~  383 (500)
T KOG3993|consen  340 AEVQEAERSGDDSSSGIFSCHT--CGKKFRRQAYLRKHQLTHQRAP  383 (500)
T ss_pred             hhhhhccccCCcccCceeecHH--hhhhhHHHHHHHHhHHhhhccc
Confidence                0      01234699977  9999999999999988777644

>PHA02768 hypothetical protein; Provisional

Probab=98.03  E-value=1.9e-06  Score=61.42  Aligned_cols=43  Identities=19%  Similarity=0.286  Sum_probs=38.0

Q ss_pred             ceEecCCCCCcccCChhHHHhhHhCcC-cccCCCCCccCCCchhhh
Q 025436           66 RVCCPIVGCNARMRSLEEFEDHYNARH-TASCSVCCRVYPTSRLLS  110 (253)
Q Consensus        66 ~f~C~~~gC~k~F~s~~~L~~H~~~~H-~~~Cs~C~ksF~s~~~L~  110 (253)
                      -|.|+.  ||+.|+...+|..|++++. .+.|..|++.|.+...|.
T Consensus         5 ~y~C~~--CGK~Fs~~~~L~~H~r~H~k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPI--CGEIYIKRKSMITHLRKHNTNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcch--hCCeeccHHHHHHHHHhcCCcccCCcccceecccceeE
Confidence            389988  9999999999999999855 699999999999877764

>PLN03086 PRLI-interacting factor K; Provisional

Probab=97.88  E-value=2e-05  Score=79.00  Aligned_cols=85  Identities=18%  Similarity=0.311  Sum_probs=64.4

Q ss_pred             CcceEecCCCCCcccCChhHHHhhHhCcCc-ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCc
Q 025436           64 GRRVCCPIVGCNARMRSLEEFEDHYNARHT-ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLK  142 (253)
Q Consensus        64 ~k~f~C~~~gC~k~F~s~~~L~~H~~~~H~-~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kk  142 (253)
                      +..+.|+.  |++.|. ..+|+.|+...|. +.|. ||+.+ ....|..|+.          .|..++++.|.+  |++.
T Consensus       451 ~~H~~C~~--Cgk~f~-~s~LekH~~~~Hkpv~Cp-Cg~~~-~R~~L~~H~~----------thCp~Kpi~C~f--C~~~  513 (567)
T PLN03086        451 KNHVHCEK--CGQAFQ-QGEMEKHMKVFHEPLQCP-CGVVL-EKEQMVQHQA----------STCPLRLITCRF--CGDM  513 (567)
T ss_pred             ccCccCCC--CCCccc-hHHHHHHHHhcCCCccCC-CCCCc-chhHHHhhhh----------ccCCCCceeCCC--CCCc
Confidence            34567877  999995 6889999987664 8899 99765 5688889985          256788999977  9999


Q ss_pred             CC----------ChhHHHhHHhhhcCCCCcccccc
Q 025436          143 FK----------NYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       143 F~----------t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      |.          ....|..|.. .+ ..+++.|+.
T Consensus       514 v~~g~~~~d~~d~~s~Lt~HE~-~C-G~rt~~C~~  546 (567)
T PLN03086        514 VQAGGSAMDVRDRLRGMSEHES-IC-GSRTAPCDS  546 (567)
T ss_pred             cccCccccchhhhhhhHHHHHH-hc-CCcceEccc
Confidence            95          2457889985 33 567788864

>PHA00732 hypothetical protein

Probab=97.80  E-value=1.6e-05  Score=60.51  Aligned_cols=45  Identities=27%  Similarity=0.543  Sum_probs=37.7

Q ss_pred             ceEecCCCCCcccCChhHHHhhHhC-cCcccCCCCCccCCCchhhhhhhhh
Q 025436           66 RVCCPIVGCNARMRSLEEFEDHYNA-RHTASCSVCCRVYPTSRLLSIHVSE  115 (253)
Q Consensus        66 ~f~C~~~gC~k~F~s~~~L~~H~~~-~H~~~Cs~C~ksF~s~~~L~~Hi~e  115 (253)
                      ||.|..  |++.|.+..+|+.|++. +..+.|+.|++.|.   .|..|+..
T Consensus         1 py~C~~--Cgk~F~s~s~Lk~H~r~~H~~~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          1 MFKCPI--CGFTTVTLFALKQHARRNHTLTKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             CccCCC--CCCccCCHHHHHHHhhcccCCCccCCCCCEeC---Chhhhhcc
Confidence            578977  99999999999999974 34589999999998   58888864

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.72  E-value=3.6e-05  Score=53.95  Aligned_cols=53  Identities=19%  Similarity=0.402  Sum_probs=39.5

Q ss_pred             cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHhhhcC
Q 025436           93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      +|.|+.|++ ..+...|..|+.+.|.        ...+.+.|++  |...+.  .++..||...|.
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~--------~~~~~v~CPi--C~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHR--------SESKNVVCPI--CSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCc--------CCCCCccCCC--chhhhh--hHHHHHHHHhcC
Confidence            478999999 5566788889887661        1234699988  998765  388999987763

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.62  E-value=2.2e-05  Score=73.68  Aligned_cols=78  Identities=24%  Similarity=0.500  Sum_probs=54.6

Q ss_pred             CCCcceEecCCCCCcccCChhHHHhhHhCcCcccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCC
Q 025436           62 EDGRRVCCPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGL  141 (253)
Q Consensus        62 ~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~k  141 (253)
                      .+.+||.|+++||+|++.+...|+-|+.  |.+. ..  +.-++.      -.+-|+.|.     -..+||.|.|  |+|
T Consensus       345 ~d~KpykCpV~gC~K~YknqnGLKYH~l--hGH~-~~--~~~~~p------~p~~~~~F~-----~~~KPYrCev--C~K  406 (423)
T COG5189         345 KDGKPYKCPVEGCNKKYKNQNGLKYHML--HGHQ-NQ--KLHENP------SPEKMNIFS-----AKDKPYRCEV--CDK  406 (423)
T ss_pred             ecCceecCCCCCchhhhccccchhhhhh--cccc-Cc--ccCCCC------Ccccccccc-----ccCCceeccc--cch
Confidence            3459999999999999999999999985  4321 10  111111      112234341     2468999977  999


Q ss_pred             cCCChhHHHhHHhhhc
Q 025436          142 KFKNYKSRQQHLVDKH  157 (253)
Q Consensus       142 kF~t~~~rk~Hl~~~H  157 (253)
                      ++++...||.|..--|
T Consensus       407 RYKNlNGLKYHr~Hsh  422 (423)
T COG5189         407 RYKNLNGLKYHRKHSH  422 (423)
T ss_pred             hhccCccceecccccC
Confidence            9999999999976544

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.58  E-value=4.2e-05  Score=57.70  Aligned_cols=74  Identities=18%  Similarity=0.356  Sum_probs=22.0

Q ss_pred             EecCCCCCcccCChhHHHhhHhCcCcccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChh
Q 025436           68 CCPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYK  147 (253)
Q Consensus        68 ~C~~~gC~k~F~s~~~L~~H~~~~H~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~  147 (253)
                      +|.+  |+..|.+...|..|+...|.+....... +.....|..++..           .-...+.|.+  |++.|.+..
T Consensus         1 ~C~~--C~~~f~~~~~l~~H~~~~H~~~~~~~~~-l~~~~~~~~~~~~-----------~~~~~~~C~~--C~~~f~s~~   64 (100)
T PF12756_consen    1 QCLF--CDESFSSVDDLLQHMKKKHGFDIPDQKY-LVDPNRLLNYLRK-----------KVKESFRCPY--CNKTFRSRE   64 (100)
T ss_dssp             --------------------------------------------------------------SSEEBSS--SS-EESSHH
T ss_pred             Cccc--cccccccccccccccccccccccccccc-ccccccccccccc-----------ccCCCCCCCc--cCCCCcCHH
Confidence            4777  9999999999999998778765442222 2233333334432           1123699988  999999999


Q ss_pred             HHHhHHhhhc
Q 025436          148 SRQQHLVDKH  157 (253)
Q Consensus       148 ~rk~Hl~~~H  157 (253)
                      .++.||..++
T Consensus        65 ~l~~Hm~~~~   74 (100)
T PF12756_consen   65 ALQEHMRSKH   74 (100)
T ss_dssp             HHHHHHHHTT
T ss_pred             HHHHHHcCcc
Confidence            9999998653

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=97.56  E-value=3.7e-05  Score=46.43  Aligned_cols=26  Identities=35%  Similarity=0.639  Sum_probs=21.8

Q ss_pred             hhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCC
Q 025436          108 LLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKN  145 (253)
Q Consensus       108 ~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t  145 (253)
                      .|..|++          .|+|++||.|.+  |+++|.+
T Consensus         1 ~l~~H~~----------~H~~~k~~~C~~--C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMR----------THTGEKPYKCPY--CGKSFSN   26 (26)
T ss_dssp             HHHHHHH----------HHSSSSSEEESS--SSEEESS
T ss_pred             CHHHHhh----------hcCCCCCCCCCC--CcCeeCc
Confidence            4788887          478999999977  9999974

...

>PHA00732 hypothetical protein

Probab=97.41  E-value=9e-05  Score=56.38  Aligned_cols=44  Identities=25%  Similarity=0.499  Sum_probs=36.8

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHh
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLV  154 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~  154 (253)
                      |.|..|++.|.+...|..|++.+|         .   ++.|..  ||+.|.   .+..|+.
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H---------~---~~~C~~--CgKsF~---~l~~H~~   45 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNH---------T---LTKCPV--CNKSYR---RLNQHFY   45 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhccc---------C---CCccCC--CCCEeC---Chhhhhc
Confidence            789999999999999999997433         2   368966  999998   5788985

>PLN03086 PRLI-interacting factor K; Provisional

Probab=97.29  E-value=0.0002  Score=71.92  Aligned_cols=74  Identities=22%  Similarity=0.447  Sum_probs=50.9

Q ss_pred             EecCCCCCcccCChhHHHhhHhCcCcccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChh
Q 025436           68 CCPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYK  147 (253)
Q Consensus        68 ~C~~~gC~k~F~s~~~L~~H~~~~H~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~  147 (253)
                      .|+..+|+..| ...+++.|      +.|+.|++.|. ...|+.|+..+|            .+|.|+   ||+.+ ...
T Consensus       435 ~Cp~~~Cg~v~-~r~el~~H------~~C~~Cgk~f~-~s~LekH~~~~H------------kpv~Cp---Cg~~~-~R~  490 (567)
T PLN03086        435 VCPHDGCGIVL-RVEEAKNH------VHCEKCGQAFQ-QGEMEKHMKVFH------------EPLQCP---CGVVL-EKE  490 (567)
T ss_pred             eCCccccccee-eccccccC------ccCCCCCCccc-hHHHHHHHHhcC------------CCccCC---CCCCc-chh
Confidence            45444565555 34444444      36999999996 577899987532            579995   99755 678


Q ss_pred             HHHhHHhhhcCCCCccccc
Q 025436          148 SRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       148 ~rk~Hl~~~H~~p~~f~f~  166 (253)
                      .|..|+. .|.-.+++.|.
T Consensus       491 ~L~~H~~-thCp~Kpi~C~  508 (567)
T PLN03086        491 QMVQHQA-STCPLRLITCR  508 (567)
T ss_pred             HHHhhhh-ccCCCCceeCC
Confidence            9999974 67656666665

>PHA00616 hypothetical protein

Probab=97.17  E-value=0.00016  Score=49.32  Aligned_cols=33  Identities=36%  Similarity=0.694  Sum_probs=22.3

Q ss_pred             ceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          131 MYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       131 ~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      ||+|+.  ||+.|..++++..|++.+|+ .++|.++
T Consensus         1 pYqC~~--CG~~F~~~s~l~~H~r~~hg-~~~~~~~   33 (44)
T PHA00616          1 MYQCLR--CGGIFRKKKEVIEHLLSVHK-QNKLTLE   33 (44)
T ss_pred             CCccch--hhHHHhhHHHHHHHHHHhcC-CCcccee
Confidence            577865  88888888888888765554 3554443

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.04  E-value=0.00047  Score=48.30  Aligned_cols=47  Identities=23%  Similarity=0.508  Sum_probs=38.7

Q ss_pred             ceEecCCCCCcccCChhHHHhhHhCcCc-----ccCCCCCccCCCchhhhhhhhhhc
Q 025436           66 RVCCPIVGCNARMRSLEEFEDHYNARHT-----ASCSVCCRVYPTSRLLSIHVSEAH  117 (253)
Q Consensus        66 ~f~C~~~gC~k~F~s~~~L~~H~~~~H~-----~~Cs~C~ksF~s~~~L~~Hi~e~H  117 (253)
                      .|.|++  |++ -.+..+|..|+...|.     ++|++|...+..  .|..|+...|
T Consensus         2 ~f~CP~--C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~~--~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPY--CGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVTD--NLIRHLNSQH   53 (54)
T ss_pred             CcCCCC--CCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhhh--HHHHHHHHhc
Confidence            489999  999 5667899999987774     889999987553  8999998655

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.96  E-value=0.00021  Score=41.12  Aligned_cols=15  Identities=27%  Similarity=0.724  Sum_probs=5.5

Q ss_pred             cCCcCCChhHHHhHH
Q 025436          139 CGLKFKNYKSRQQHL  153 (253)
Q Consensus       139 C~kkF~t~~~rk~Hl  153 (253)
                      |++.|.+...|+.|+
T Consensus         6 C~~~f~~~~~l~~H~   20 (23)
T PF00096_consen    6 CGKSFSSKSNLKRHM   20 (23)
T ss_dssp             TTEEESSHHHHHHHH
T ss_pred             CCCccCCHHHHHHHH
Confidence            333333333333333

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.87  E-value=0.00041  Score=39.40  Aligned_cols=19  Identities=32%  Similarity=0.707  Sum_probs=8.3

Q ss_pred             cCCcCCChhHHHhHHhhhc
Q 025436          139 CGLKFKNYKSRQQHLVDKH  157 (253)
Q Consensus       139 C~kkF~t~~~rk~Hl~~~H  157 (253)
                      |++.|.+...|+.|+..+|
T Consensus         6 C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    6 CGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             TS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCcHHHHHHHHHhhC
Confidence            4444444444444444443

...

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.85  E-value=0.00079  Score=38.20  Aligned_cols=24  Identities=21%  Similarity=0.574  Sum_probs=20.0

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAH  117 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~H  117 (253)
                      |.|++|++.|++...|..|+..+|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            689999999999999999998754

...

>PHA00616 hypothetical protein

Probab=96.77  E-value=0.00042  Score=47.30  Aligned_cols=33  Identities=9%  Similarity=0.149  Sum_probs=23.8

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|..||+.|..+..|..|++.          |.|++++.|..
T Consensus         2 YqC~~CG~~F~~~s~l~~H~r~----------~hg~~~~~~~~   34 (44)
T PHA00616          2 YQCLRCGGIFRKKKEVIEHLLS----------VHKQNKLTLEY   34 (44)
T ss_pred             CccchhhHHHhhHHHHHHHHHH----------hcCCCccceeE
Confidence            6777777777777777777764          44677777753

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.69  E-value=0.00085  Score=38.56  Aligned_cols=22  Identities=18%  Similarity=0.569  Sum_probs=20.6

Q ss_pred             ccCCCCCccCCCchhhhhhhhh
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSE  115 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e  115 (253)
                      |+|..|++.|+++..|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            6899999999999999999974

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.42  E-value=0.001  Score=62.64  Aligned_cols=25  Identities=28%  Similarity=0.582  Sum_probs=21.2

Q ss_pred             cccCCC--CCccCCCchhhhhhhhhhc
Q 025436           93 TASCSV--CCRVYPTSRLLSIHVSEAH  117 (253)
Q Consensus        93 ~~~Cs~--C~ksF~s~~~L~~Hi~e~H  117 (253)
                      .|.|.+  |.|.|.+..-|+.|+..=|
T Consensus       349 pykCpV~gC~K~YknqnGLKYH~lhGH  375 (423)
T COG5189         349 PYKCPVEGCNKKYKNQNGLKYHMLHGH  375 (423)
T ss_pred             eecCCCCCchhhhccccchhhhhhccc
Confidence            499987  9999999999999987544

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=95.91  E-value=0.0073  Score=35.92  Aligned_cols=23  Identities=22%  Similarity=0.491  Sum_probs=16.7

Q ss_pred             ceEecCCCCCcccCChhHHHhhHhC
Q 025436           66 RVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        66 ~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      +|.|..  |++.|.+...|..|++.
T Consensus         1 ~~~C~~--C~~~F~~~~~l~~H~~~   23 (27)
T PF13912_consen    1 PFECDE--CGKTFSSLSALREHKRS   23 (27)
T ss_dssp             SEEETT--TTEEESSHHHHHHHHCT
T ss_pred             CCCCCc--cCCccCChhHHHHHhHH
Confidence            467766  77777777777777754

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=95.88  E-value=0.0027  Score=61.67  Aligned_cols=52  Identities=17%  Similarity=0.362  Sum_probs=44.7

Q ss_pred             cceEecCCCCCcccCChhHHHhhHhCcC------------------------------------cccCCCCCccCCCchh
Q 025436           65 RRVCCPIVGCNARMRSLEEFEDHYNARH------------------------------------TASCSVCCRVYPTSRL  108 (253)
Q Consensus        65 k~f~C~~~gC~k~F~s~~~L~~H~~~~H------------------------------------~~~Cs~C~ksF~s~~~  108 (253)
                      -.|+|+.  |+|.|+...+|-.|.+-+.                                    -|.|..|+|.|.++..
T Consensus       294 vEYrCPE--C~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAY  371 (500)
T KOG3993|consen  294 VEYRCPE--CDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAY  371 (500)
T ss_pred             eeecCCc--ccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHH
Confidence            3799977  9999999999999975211                                    1889999999999999


Q ss_pred             hhhhhhhhcc
Q 025436          109 LSIHVSEAHD  118 (253)
Q Consensus       109 L~~Hi~e~Hd  118 (253)
                      |+.|...+|.
T Consensus       372 LrKHqlthq~  381 (500)
T KOG3993|consen  372 LRKHQLTHQR  381 (500)
T ss_pred             HHHhHHhhhc
Confidence            9999888774

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=95.86  E-value=0.0047  Score=37.14  Aligned_cols=19  Identities=16%  Similarity=0.506  Sum_probs=17.1

Q ss_pred             ccCCCcceEecCCCCCcccCC
Q 025436           60 VTEDGRRVCCPIVGCNARMRS   80 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s   80 (253)
                      .|+|++||.|+.  |+++|.+
T Consensus         8 ~H~~~k~~~C~~--C~k~F~~   26 (26)
T PF13465_consen    8 THTGEKPYKCPY--CGKSFSN   26 (26)
T ss_dssp             HHSSSSSEEESS--SSEEESS
T ss_pred             hcCCCCCCCCCC--CcCeeCc
Confidence            589999999988  9999974

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=95.44  E-value=0.0084  Score=35.65  Aligned_cols=24  Identities=25%  Similarity=0.573  Sum_probs=15.7

Q ss_pred             ceecCccccCCcCCChhHHHhHHhhh
Q 025436          131 MYECLVEGCGLKFKNYKSRQQHLVDK  156 (253)
Q Consensus       131 ~y~C~vegC~kkF~t~~~rk~Hl~~~  156 (253)
                      +|.|.+  |++.|.+...+..|++.+
T Consensus         1 ~~~C~~--C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    1 PFECDE--CGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             SEEETT--TTEEESSHHHHHHHHCTT
T ss_pred             CCCCCc--cCCccCChhHHHHHhHHh
Confidence            466755  777777777777776533

>smart00355 ZnF_C2H2 zinc finger

Probab=94.34  E-value=0.025  Score=32.04  Aligned_cols=21  Identities=24%  Similarity=0.583  Sum_probs=14.2

Q ss_pred             ccCCCCCccCCCchhhhhhhh
Q 025436           94 ASCSVCCRVYPTSRLLSIHVS  114 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~  114 (253)
                      |.|..|++.|.+...|..|+.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~   21 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMR   21 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHH
Confidence            456677777777777777765

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=94.30  E-value=0.014  Score=41.21  Aligned_cols=28  Identities=21%  Similarity=0.435  Sum_probs=11.9

Q ss_pred             CCceecCccccCCcCCChhHHHhHHhhhcC
Q 025436          129 YPMYECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       129 ek~y~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      +.|-.|++  |+..+..+.+|++||...|.
T Consensus        22 ~~PatCP~--C~a~~~~srnLrRHle~~H~   49 (54)
T PF09237_consen   22 EQPATCPI--CGAVIRQSRNLRRHLEIRHF   49 (54)
T ss_dssp             S--EE-TT--T--EESSHHHHHHHHHHHTT
T ss_pred             CCCCCCCc--chhhccchhhHHHHHHHHhc
Confidence            34455544  55555555555555544444

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=93.72  E-value=0.061  Score=31.25  Aligned_cols=22  Identities=27%  Similarity=0.632  Sum_probs=15.4

Q ss_pred             eEecCCCCCcccCChhHHHhhHhC
Q 025436           67 VCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        67 f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      |.|.+  |++.|.+...|+.|++.
T Consensus         1 ~~C~~--C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDI--CNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETT--TTEEESSHHHHHHHHTT
T ss_pred             CCCCC--CCCCcCCHHHHHHHHCc
Confidence            56766  77777777777777753

>smart00355 ZnF_C2H2 zinc finger

Probab=93.61  E-value=0.059  Score=30.41  Aligned_cols=24  Identities=33%  Similarity=0.739  Sum_probs=20.8

Q ss_pred             eecCccccCCcCCChhHHHhHHhhhcC
Q 025436          132 YECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       132 y~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      |.|..  |++.|.+...+..|++ .|.
T Consensus         1 ~~C~~--C~~~f~~~~~l~~H~~-~H~   24 (26)
T smart00355        1 YRCPE--CGKVFKSKSALKEHMR-THX   24 (26)
T ss_pred             CCCCC--CcchhCCHHHHHHHHH-Hhc
Confidence            67966  9999999999999986 654

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=92.80  E-value=0.056  Score=32.38  Aligned_cols=21  Identities=19%  Similarity=0.534  Sum_probs=14.1

Q ss_pred             ccCCCCCccCCCchhhhhhhh
Q 025436           94 ASCSVCCRVYPTSRLLSIHVS  114 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~  114 (253)
                      |.|..|++.|.+...|+.|+.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            456667777777777766664

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=92.69  E-value=0.058  Score=55.42  Aligned_cols=44  Identities=23%  Similarity=0.477  Sum_probs=27.9

Q ss_pred             EecCCCCCcccCChhHHHhhHhCcCc-ccCCC----------CCccCCCchhhhhhhh
Q 025436           68 CCPIVGCNARMRSLEEFEDHYNARHT-ASCSV----------CCRVYPTSRLLSIHVS  114 (253)
Q Consensus        68 ~C~~~gC~k~F~s~~~L~~H~~~~H~-~~Cs~----------C~ksF~s~~~L~~Hi~  114 (253)
                      .|.+  | ..|.++..|+.||...|. +-|..          |.|-|....++..++.
T Consensus       117 ~~~~--c-~~~~s~~~Lk~H~~~~H~~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~  171 (669)
T KOG2231|consen  117 ECLH--C-TEFKSVENLKNHMRDQHKLHLCSLCLQNLKIFINERKLYTRAELNLHLMF  171 (669)
T ss_pred             CCcc--c-cchhHHHHHHHHHHHhhhhhccccccccceeeeeeeehehHHHHHHHHhc
Confidence            4655  6 677899999999976675 33433          4555555554444443

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=91.99  E-value=0.11  Score=36.82  Aligned_cols=32  Identities=28%  Similarity=0.504  Sum_probs=22.9

Q ss_pred             hhHhCcCcccCCCCCccCCCchhhhhhhhhhc
Q 025436           86 DHYNARHTASCSVCCRVYPTSRLLSIHVSEAH  117 (253)
Q Consensus        86 ~H~~~~H~~~Cs~C~ksF~s~~~L~~Hi~e~H  117 (253)
                      .|++..+...|++|+..+++..+|.+|+..+|
T Consensus        17 ~~~~S~~PatCP~C~a~~~~srnLrRHle~~H   48 (54)
T PF09237_consen   17 SKSQSEQPATCPICGAVIRQSRNLRRHLEIRH   48 (54)
T ss_dssp             CCCTTS--EE-TTT--EESSHHHHHHHHHHHT
T ss_pred             HhhccCCCCCCCcchhhccchhhHHHHHHHHh
Confidence            35556678999999999999999999997666

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=91.96  E-value=0.093  Score=30.43  Aligned_cols=21  Identities=33%  Similarity=0.654  Sum_probs=14.0

Q ss_pred             eecCccccCCcCCChhHHHhHHh
Q 025436          132 YECLVEGCGLKFKNYKSRQQHLV  154 (253)
Q Consensus       132 y~C~vegC~kkF~t~~~rk~Hl~  154 (253)
                      |.|.+  |++.|.+...++.|+.
T Consensus         1 ~~C~~--C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDI--CNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETT--TTEEESSHHHHHHHHT
T ss_pred             CCCCC--CCCCcCCHHHHHHHHC
Confidence            45655  7777777777777764

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=91.53  E-value=0.066  Score=58.34  Aligned_cols=80  Identities=24%  Similarity=0.372  Sum_probs=62.0

Q ss_pred             CCcccCChhHHHhhHhCcC----cccCCCCCccCCCchhhhhhhhhhc-ch------hhhh--hhhc------CCCceec
Q 025436           74 CNARMRSLEEFEDHYNARH----TASCSVCCRVYPTSRLLSIHVSEAH-DS------FFQA--KVAR------GYPMYEC  134 (253)
Q Consensus        74 C~k~F~s~~~L~~H~~~~H----~~~Cs~C~ksF~s~~~L~~Hi~e~H-d~------~f~~--~~h~------gek~y~C  134 (253)
                      |+-.|.+...++.|+...|    +++|.+|+..|+....|..|+++.| ++      +++.  +..+      +.++|.|
T Consensus       442 ~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C  521 (1406)
T KOG1146|consen  442 AEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPC  521 (1406)
T ss_pred             hhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccc
Confidence            6667888888888876555    4999999999999999999999855 43      1222  1122      2368999


Q ss_pred             CccccCCcCCChhHHHhHHhh
Q 025436          135 LVEGCGLKFKNYKSRQQHLVD  155 (253)
Q Consensus       135 ~vegC~kkF~t~~~rk~Hl~~  155 (253)
                      .+  |...+++..+|-+||..
T Consensus       522 ~~--C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  522 RA--CNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             ee--eeeeeecchHHHHHHHH
Confidence            77  99999999999999963

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=91.19  E-value=0.13  Score=30.83  Aligned_cols=22  Identities=18%  Similarity=0.551  Sum_probs=20.2

Q ss_pred             eEecCCCCCcccCChhHHHhhHhC
Q 025436           67 VCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        67 f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      |.|.+  |++.|.+...|+.|+++
T Consensus         2 ~~C~~--C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDA--CDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTT--TTBBBSSHHHHHCCTTS
T ss_pred             CCccc--CCCCcCCHHHHHHHHcc
Confidence            68988  99999999999999975

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=90.28  E-value=0.21  Score=28.82  Aligned_cols=23  Identities=26%  Similarity=0.586  Sum_probs=13.2

Q ss_pred             eecCccccCCcCCChhHHHhHHhhhc
Q 025436          132 YECLVEGCGLKFKNYKSRQQHLVDKH  157 (253)
Q Consensus       132 y~C~vegC~kkF~t~~~rk~Hl~~~H  157 (253)
                      |+|..  |+-... ...++.|+..+|
T Consensus         1 y~C~~--C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPH--CSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SS--SS-EES-HHHHHHHHHHHH
T ss_pred             CCCCC--CCCcCC-HHHHHHHHHhhC
Confidence            56655  666665 666667766555

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=89.92  E-value=0.2  Score=48.05  Aligned_cols=92  Identities=24%  Similarity=0.408  Sum_probs=55.4

Q ss_pred             cceEecCCCCCcccCChhHHHhhHhCcC-cccCCCCC---ccCCCc------hhhhhhhhhhcchhhhhhhhcCC-Ccee
Q 025436           65 RRVCCPIVGCNARMRSLEEFEDHYNARH-TASCSVCC---RVYPTS------RLLSIHVSEAHDSFFQAKVARGY-PMYE  133 (253)
Q Consensus        65 k~f~C~~~gC~k~F~s~~~L~~H~~~~H-~~~Cs~C~---ksF~s~------~~L~~Hi~e~Hd~~f~~~~h~ge-k~y~  133 (253)
                      -.|.|+...|...-..+.+|+.|+...| .+.|..|-   +.|+..      ..|..|... =+      ...|- .-=.
T Consensus       150 L~F~CP~skc~~~C~~~k~lk~H~K~~H~~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~-G~------~e~GFKGHP~  222 (493)
T COG5236         150 LSFKCPKSKCHRRCGSLKELKKHYKAQHGFVLCSECIGNKKDFWNEIRLFRSSTLRDHKNG-GL------EEEGFKGHPL  222 (493)
T ss_pred             HHhcCCchhhhhhhhhHHHHHHHHHhhcCcEEhHhhhcCcccCccceeeeecccccccccC-Cc------cccCcCCCch
Confidence            3589999999999999999999998755 36676663   455543      233334321 00      01111 1125


Q ss_pred             cCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          134 CLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       134 C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      |-+  |...|.....|..|++..|.  +=|-||+
T Consensus       223 C~F--C~~~FYdDDEL~~HcR~~HE--~ChICD~  252 (493)
T COG5236         223 CIF--CKIYFYDDDELRRHCRLRHE--ACHICDM  252 (493)
T ss_pred             hhh--ccceecChHHHHHHHHhhhh--hhhhhhc
Confidence            755  77777777777777776663  3344444

>PRK04860 hypothetical protein; Provisional

Probab=88.81  E-value=0.26  Score=42.22  Aligned_cols=39  Identities=26%  Similarity=0.496  Sum_probs=31.4

Q ss_pred             CcccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCCh
Q 025436           92 HTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNY  146 (253)
Q Consensus        92 H~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~  146 (253)
                      +.|.|. |+.   ....+.+|.+          .++++++|.|..  |+..|.-.
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~r----------i~~g~~~YrC~~--C~~~l~~~  156 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNR----------VVRGEAVYRCRR--CGETLVFK  156 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHH----------HhcCCccEECCC--CCceeEEe
Confidence            569998 998   6777788886          478899999966  99988654

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=87.08  E-value=0.34  Score=27.92  Aligned_cols=20  Identities=20%  Similarity=0.404  Sum_probs=8.4

Q ss_pred             cCCCCCccCCCchhhhhhhhh
Q 025436           95 SCSVCCRVYPTSRLLSIHVSE  115 (253)
Q Consensus        95 ~Cs~C~ksF~s~~~L~~Hi~e  115 (253)
                      .|..|..+.. ...|..|+..
T Consensus         2 ~C~~C~y~t~-~~~l~~H~~~   21 (24)
T PF13909_consen    2 KCPHCSYSTS-KSNLKRHLKR   21 (24)
T ss_dssp             E-SSSS-EES-HHHHHHHHHH
T ss_pred             CCCCCCCcCC-HHHHHHHHHh
Confidence            4444554444 4445555443

>smart00451 ZnF_U1 U1-like zinc finger

Probab=85.40  E-value=0.69  Score=28.64  Aligned_cols=23  Identities=22%  Similarity=0.505  Sum_probs=16.4

Q ss_pred             ceEecCCCCCcccCChhHHHhhHhC
Q 025436           66 RVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        66 ~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      +|.|.+  |++.|.+...++.|++.
T Consensus         3 ~~~C~~--C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKL--CNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccc--cCCccCCHHHHHHHHCh
Confidence            467777  77777777777777753

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=84.74  E-value=0.74  Score=27.45  Aligned_cols=21  Identities=33%  Similarity=0.684  Sum_probs=15.1

Q ss_pred             ceecCccccCCcCCChhHHHhHHh
Q 025436          131 MYECLVEGCGLKFKNYKSRQQHLV  154 (253)
Q Consensus       131 ~y~C~vegC~kkF~t~~~rk~Hl~  154 (253)
                      +..|++  ||++| ....+..|+.
T Consensus         2 l~~C~~--CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    2 LVPCPI--CGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CCcCCC--CCCEE-CHHHHHHHHH
Confidence            356866  88888 6667777764

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=84.37  E-value=0.55  Score=42.67  Aligned_cols=65  Identities=17%  Similarity=0.261  Sum_probs=51.9

Q ss_pred             cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCC--CceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436           93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGY--PMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~ge--k~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      .+.|..|...|.....|..|.+.        ..|.++  +++.|++..|++.|.....+..|.. .|.....+.+.
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~--------~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  355 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRS--------VNHSGESLKPFSCPYSLCGKLFSRNDALKRHIL-LHTSISPAKEK  355 (467)
T ss_pred             CCCCccccCCccccccccccccc--------cccccccCCceeeeccCCCccccccccccCCcc-cccCCCccccc
Confidence            37899999999999999999974        025677  8999996679999999999999985 56555444443

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=84.07  E-value=0.59  Score=27.87  Aligned_cols=19  Identities=26%  Similarity=0.662  Sum_probs=11.0

Q ss_pred             cCCCCCccCCCchhhhhhhh
Q 025436           95 SCSVCCRVYPTSRLLSIHVS  114 (253)
Q Consensus        95 ~Cs~C~ksF~s~~~L~~Hi~  114 (253)
                      .|..||+.| ....|..|+.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            466666666 5555555553

>smart00451 ZnF_U1 U1-like zinc finger

Probab=81.63  E-value=1.3  Score=27.33  Aligned_cols=23  Identities=26%  Similarity=0.559  Sum_probs=20.1

Q ss_pred             ceecCccccCCcCCChhHHHhHHhh
Q 025436          131 MYECLVEGCGLKFKNYKSRQQHLVD  155 (253)
Q Consensus       131 ~y~C~vegC~kkF~t~~~rk~Hl~~  155 (253)
                      +|.|.+  |++.|.+...++.|+..
T Consensus         3 ~~~C~~--C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKL--CNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccc--cCCccCCHHHHHHHHCh
Confidence            588977  99999999999999863

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=81.51  E-value=0.44  Score=43.78  Aligned_cols=46  Identities=26%  Similarity=0.473  Sum_probs=26.4

Q ss_pred             ecCCCCCcccCChhHHHhhHhCcCcccCCCCCccCCCchhhhhhhhhhc
Q 025436           69 CPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAH  117 (253)
Q Consensus        69 C~~~gC~k~F~s~~~L~~H~~~~H~~~Cs~C~ksF~s~~~L~~Hi~e~H  117 (253)
                      |-.  |+..|..-.-|..|... .-|.|.+|.|..-+---|.+|.-..|
T Consensus        13 cwy--cnrefddekiliqhqka-khfkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   13 CWY--CNREFDDEKILIQHQKA-KHFKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             eee--cccccchhhhhhhhhhh-ccceeeeehhhhccCCCceeehhhhh
Confidence            544  66666666666666643 22666666666656555666654433

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=80.92  E-value=0.46  Score=42.24  Aligned_cols=17  Identities=18%  Similarity=0.768  Sum_probs=8.0

Q ss_pred             ceEecCCCCCcccCChhHH
Q 025436           66 RVCCPIVGCNARMRSLEEF   84 (253)
Q Consensus        66 ~f~C~~~gC~k~F~s~~~L   84 (253)
                      .+.|++  |++.|.+..-.
T Consensus         5 ~~~CPv--C~~~F~~~~vr   21 (214)
T PF09986_consen    5 KITCPV--CGKEFKTKKVR   21 (214)
T ss_pred             ceECCC--CCCeeeeeEEE
Confidence            345554  55555444333

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=80.09  E-value=1.3  Score=40.26  Aligned_cols=57  Identities=25%  Similarity=0.470  Sum_probs=48.6

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHhhhcCCC
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFP  160 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p  160 (253)
                      +.|..|..+|.....+..|+.          .+.+++++.|...+|...|.....+..|+..++...
T Consensus        34 ~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (467)
T COG5048          34 DSCPNCTDSFSRLEHLTRHIR----------SHTGEKPSQCSYSGCDKSFSRPLELSRHLRTHHNNP   90 (467)
T ss_pred             hhcccccccccccchhhhhcc----------cccccCCccccccccccccCCcchhhhhcccccccc
Confidence            778888888888888888886          478899999999999999999999999987666543

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=80.06  E-value=0.59  Score=33.78  Aligned_cols=32  Identities=22%  Similarity=0.453  Sum_probs=27.3

Q ss_pred             cCCCcceEecCCCCCcccCChhHHHhhHhCcCcc
Q 025436           61 TEDGRRVCCPIVGCNARMRSLEEFEDHYNARHTA   94 (253)
Q Consensus        61 h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H~~   94 (253)
                      ..|+.-+.|+-  |++.|....+|.+|.+..|.|
T Consensus        12 RDGE~~lrCPR--C~~~FR~~K~Y~RHVNKaH~~   43 (65)
T COG4049          12 RDGEEFLRCPR--CGMVFRRRKDYIRHVNKAHGW   43 (65)
T ss_pred             cCCceeeeCCc--hhHHHHHhHHHHHHhhHHhhh
Confidence            45778899977  999999999999999876754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	253
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-07

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.9 bits (118), Expect = 3e-07
 Identities = 27/226 (11%), Positives = 61/226 (26%), Gaps = 70/226 (30%)

Query: 2   AMVL-DANFESEFP---HWASVRRCFRPDSPFFASGNIERELLAKQVALDFSEDEKYQLE 57
             V      + +      W +++ C  P++           +L     L       YQ++
Sbjct: 168 LDVCLSYKVQCKMDFKIFWLNLKNCNSPET-----------VLEMLQKL------LYQID 210

Query: 58  NMVTEDGRRVCCPIVGCN---ARMRSLEEFEDH----------YNARHTASCSVCCRVYP 104
              T          +  +   A +R L + + +           NA+   + ++ C++  
Sbjct: 211 PNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILL 270

Query: 105 TSRLLSI----------HVSEAH--DSF-------FQAKVA------------RGYPMYE 133
           T+R   +          H+S  H   +           K                 P   
Sbjct: 271 TTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPR-- 328

Query: 134 CLVEGCGLKFKNYKSRQQHL--VDKHKFPTSFEFFKKAHPSKKQRQ 177
             +       ++  +   +   V+  K  T  E         + R+
Sbjct: 329 -RLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRK 373

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	253
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.69
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.65
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.64
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.64
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.62
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.62
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.62
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.61
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.61
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.61
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.61
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.59
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.58
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.57
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.56
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.56
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.56
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.55
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.55
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.54
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.53
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.53
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.52
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.51
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.48
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.46
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.44
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.42
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.31
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.26
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.25
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.24
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.2
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.19
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.18
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.17
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.16
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.16
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.15
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.15
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.14
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.14
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.13
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.12
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.11
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.1
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.1
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.09
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.06
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.04
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.03
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	98.98
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	98.96
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.95
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	98.94
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	98.94
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.93
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	98.93
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	98.93
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.93
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.93
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	98.92
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	98.91
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	98.89
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.89
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.88
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	98.87
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	98.86
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.85
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	98.85
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	98.83
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	98.82
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.8
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	98.8
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	98.77
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	98.71
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.69
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.67
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.64
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.62
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.59
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.51
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.5
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.5
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.35
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.34
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.34
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.34
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.33
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.33
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.33
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.33
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.32
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.32
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.32
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.32
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.32
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.32
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.32
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.31
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.31
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.31
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.3
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.3
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.3
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.3
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.3
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.3
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.3
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.3
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.3
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.3
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.3
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.3
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.3
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.29
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.29
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.29
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.29
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.29
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.29
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.29
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.29
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.29
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.28
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.28
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.28
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.28
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.28
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.28
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.28
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.28
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.28
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.28
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.28
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.28
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.28
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.27
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.27
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.27
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.27
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.27
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.27
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.26
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.26
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.26
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.26
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.26
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.26
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.26
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.25
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.25
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.25
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.25
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.25
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.25
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.25
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.24
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.24
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.24
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.24
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.24
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.24
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.24
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.24
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.24
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.24
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.24
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.23
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.23
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.23
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.23
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.23
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.23
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.23
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.22
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.22
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.22
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.22
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.22
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.22
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.22
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.22
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.22
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.21
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.21
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.21
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.21
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.21
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.21
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.2
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.2
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.2
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.2
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.2
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.2
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.2
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.19
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.19
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.19
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.19
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.19
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.19
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.19
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.19
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.18
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.18
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.18
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.18
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.18
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.18
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.18
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.18
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.17
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.17
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.17
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.17
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.17
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.17
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.17
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.17
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.17
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.16
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.16
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.16
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.16
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.16
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.16
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.16
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.16
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.16
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.16
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.16
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.16
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.15
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.15
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.15
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.15
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.15
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.14
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.14
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.14
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.14
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.14
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.13
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.13
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.13
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.13
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.13
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.13
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.13
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.13
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.13
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.12
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.12
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.12
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.11
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.11
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.1
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.09
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.09
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.08
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.08
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.07
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.07
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.07
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.07
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.06
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.05
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.04
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.03
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.02
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.02
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.02
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.02
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.01
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.99
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	97.99
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	97.99
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	97.98
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	97.98
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.98
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	97.97
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	97.97
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	97.96
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.95
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.91
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.91
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.9
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.89
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	97.89
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	97.89
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	97.87
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.83
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	97.82
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.78
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	97.77
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	97.75
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	97.75
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.74
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.73
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.72
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	97.71
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.71
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.68
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.67
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	97.66
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.65
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	97.65
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.65
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.61
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	97.61
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	97.61
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.6
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.59
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	97.59
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.55
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	97.55
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.55
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.54
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	97.51
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.46
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.45
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	97.43
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.42
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.4
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.38
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.35
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.35
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.34
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.33
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.31
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.29
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.28
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.26
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.23
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.21
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.2
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.2
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.19
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	97.15
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.15
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.14
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.14
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.12
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.11
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.09
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.06
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.03
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.01
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	96.99
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	96.99
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	96.99
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.0
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	96.91
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	96.9
1ard_A	29	Yeast transcription factor ADR1; transcription reg	96.88
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	95.92
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	96.86
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	96.85
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	95.89
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	96.76
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	96.75
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	96.7
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	95.72
1paa_A	30	Yeast transcription factor ADR1; transcription reg	96.64
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	95.54
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	95.4
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.72
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	93.68
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	93.49
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	92.14
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	90.83
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	89.24
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	88.61
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	84.62
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	80.07

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.69  E-value=1.1e-17  Score=135.21  Aligned_cols=94  Identities=23%  Similarity=0.543  Sum_probs=83.6

Q ss_pred             cccCCCcceEecCCCCCcccCChhHHHhhHhCcC----cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceec
Q 025436           59 MVTEDGRRVCCPIVGCNARMRSLEEFEDHYNARH----TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYEC  134 (253)
Q Consensus        59 ~~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H----~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C  134 (253)
                      ..|+|+++|.|++  |+++|.+...|..|+++ |    .|.|++|+++|.+...|..|+.          .|++++||.|
T Consensus        15 ~~h~Gek~y~C~~--C~k~F~~~~~L~~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~----------~H~~~k~~~C   81 (133)
T 2lt7_A           15 LIVDGRVYYICIV--CKRSYVCLTSLRRHFNI-HSWEKKYPCRYCEKVFPLAEYRTKHEI----------HHTGERRYQC   81 (133)
T ss_dssp             EEETTEEEEEETT--TCCEESCHHHHHHHHHH-HHCCSCEECSSSSCEESSHHHHHHHHH----------HHHTCCCEEE
T ss_pred             eecCCCcCeECCC--CCCCcCCHHHHHHHHHH-cCCCCCeeCCccCeecccccchhhhcc----------ccCCCccccC
Confidence            4678999999998  99999999999999985 5    4999999999999999999996          4689999999


Q ss_pred             CccccCCcCCChhHHHhHHhhhcCC-----CCcccccc
Q 025436          135 LVEGCGLKFKNYKSRQQHLVDKHKF-----PTSFEFFK  167 (253)
Q Consensus       135 ~vegC~kkF~t~~~rk~Hl~~~H~~-----p~~f~f~~  167 (253)
                      .+  ||+.|.+...|+.|++.+|..     .+.|.|+.
T Consensus        82 ~~--C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~  117 (133)
T 2lt7_A           82 LA--CGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHP  117 (133)
T ss_dssp             SS--SCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECC
T ss_pred             CC--CCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCC
Confidence            77  999999999999999888753     35677775

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.65  E-value=8.4e-17  Score=117.67  Aligned_cols=86  Identities=24%  Similarity=0.534  Sum_probs=73.1

Q ss_pred             CCcceEecCCCCCcccCChhHHHhhHhCcC---cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCcccc
Q 025436           63 DGRRVCCPIVGCNARMRSLEEFEDHYNARH---TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGC  139 (253)
Q Consensus        63 ~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H---~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC  139 (253)
                      |+++|.|+++.|++.|.+...|..|+++++   .|.|..|++.|.+...|..|+..          |.++++|.|.+  |
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~----------h~~~~~~~C~~--C   68 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT----------HTGEKPFACDI--C   68 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHH----------HHCCCCEECTT--T
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHH----------cCCCCCccCCC--C
Confidence            468999997779999999999999998532   49999999999999999999973          56889999977  9


Q ss_pred             CCcCCChhHHHhHHhhhcCCCC
Q 025436          140 GLKFKNYKSRQQHLVDKHKFPT  161 (253)
Q Consensus       140 ~kkF~t~~~rk~Hl~~~H~~p~  161 (253)
                      ++.|.+...|..|++ +|...+
T Consensus        69 ~~~f~~~~~l~~H~~-~H~~~k   89 (90)
T 1a1h_A           69 GRKFARSDERKRHTK-IHLRQK   89 (90)
T ss_dssp             CCEESSHHHHHHHHG-GGGC--
T ss_pred             CchhCCHHHHHHHHH-HhcccC
Confidence            999999999999996 565443

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.64  E-value=1.4e-16  Score=121.28  Aligned_cols=94  Identities=27%  Similarity=0.340  Sum_probs=84.1

Q ss_pred             cccCCCcceEecCCCCCcccCChhHHHhhHhCcC--cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           59 MVTEDGRRVCCPIVGCNARMRSLEEFEDHYNARH--TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        59 ~~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H--~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      ..|+++++|.|.+  |++.|.+...|..|+++ |  .|.|.+|++.|.+...|..|+.           |.++++|.|.+
T Consensus         9 ~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~-H~~~~~C~~C~~~f~~~~~l~~H~~-----------H~~~~~~~C~~   74 (107)
T 1wjp_A            9 SPVENKEVYQCRL--CNAKLSSLLEQGSHERL-CRNAAVCPYCSLRFFSPELKQEHES-----------KCEYKKLTCLE   74 (107)
T ss_dssp             CCCCCCCCCBCTT--TCCBCSSHHHHHHHHHH-HHHSBCCTTTCCCBSSHHHHHHHHH-----------HCSTGGGEEGG
T ss_pred             cccCCCcCeECCC--CCCccCCHHHHHHHHHH-CCCCccCCCCCCccCCHHHHHHHHH-----------cCCCCCccCcc
Confidence            3678899999988  99999999999999986 4  4999999999999999999983           35789999977


Q ss_pred             cccCCcCCChhHHHhHHhhhcCCCCccccccc
Q 025436          137 EGCGLKFKNYKSRQQHLVDKHKFPTSFEFFKK  168 (253)
Q Consensus       137 egC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~~  168 (253)
                        |++.|.+...|+.|++.+|...++|....+
T Consensus        75 --C~~~f~~~~~L~~H~~~~H~~~~~~~~~~p  104 (107)
T 1wjp_A           75 --CMRTFKSSFSIWRHQVEVHNQNNMAPTSGP  104 (107)
T ss_dssp             --GTEECSSHHHHHHHHHHTSCCCCCCCCCCS
T ss_pred             --ccchhCCHHHHHHHHHHHcCCCCCCCCCCC
Confidence              999999999999999779998888877543

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.64  E-value=3.5e-16  Score=115.68  Aligned_cols=86  Identities=26%  Similarity=0.478  Sum_probs=76.1

Q ss_pred             CCCcceEecCCCCCcccCChhHHHhhHhCcC---cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCC--CceecCc
Q 025436           62 EDGRRVCCPIVGCNARMRSLEEFEDHYNARH---TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGY--PMYECLV  136 (253)
Q Consensus        62 ~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H---~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~ge--k~y~C~v  136 (253)
                      +++++|.|.+  |++.|.+...|..|+++++   .|.|.+|++.|.+...|..|++.          |.++  ++|.|.+
T Consensus         3 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~----------h~~~~~~~~~C~~   70 (95)
T 2yt9_A            3 SGSSGVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRS----------HDGSVGKPYICQS   70 (95)
T ss_dssp             CCCSCEECSS--SCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHH----------HCCCCCSSBCCSS
T ss_pred             CCCCCeECCC--CCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHH----------hcCCCCCceECCC
Confidence            4678999988  9999999999999998643   39999999999999999999975          3444  8999977


Q ss_pred             cccCCcCCChhHHHhHHhhhcCCCC
Q 025436          137 EGCGLKFKNYKSRQQHLVDKHKFPT  161 (253)
Q Consensus       137 egC~kkF~t~~~rk~Hl~~~H~~p~  161 (253)
                        |++.|.+...|..|++.+|..+.
T Consensus        71 --C~~~f~~~~~L~~H~~~~H~~~~   93 (95)
T 2yt9_A           71 --CGKGFSRPDHLNGHIKQVHSGPS   93 (95)
T ss_dssp             --SCCCBSSHHHHHHHHHHTSCCCS
T ss_pred             --ccchhCCHHHHHHHHHHhcCCCC
Confidence              99999999999999988898764

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.62  E-value=3.9e-16  Score=119.96  Aligned_cols=94  Identities=20%  Similarity=0.385  Sum_probs=60.1

Q ss_pred             CCCcceEecCCCCCcccCChhHHHhhHhCcC---cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccc
Q 025436           62 EDGRRVCCPIVGCNARMRSLEEFEDHYNARH---TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEG  138 (253)
Q Consensus        62 ~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H---~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~veg  138 (253)
                      ++.++|.|.+  |++.|.+...|..|+++.+   .|.|..|++.|.+...|..|+..+|       .+.++++|.|.+  
T Consensus         3 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~-------~~~~~~~~~C~~--   71 (124)
T 2dlq_A            3 SGSSGVECPT--CHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNC-------MNRSEQVFTCSV--   71 (124)
T ss_dssp             CCCSSCCCTT--TCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCC-------CCSCCCCEECSS--
T ss_pred             CCCCCCCCCC--CCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhh-------cCCCCCCeECCC--
Confidence            3456677766  7777777777777765432   2677777777777777777765433       244566677755  


Q ss_pred             cCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          139 CGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       139 C~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      |++.|.+...|..|++ .|...++|.|..
T Consensus        72 C~~~f~~~~~l~~H~~-~h~~~~~~~C~~   99 (124)
T 2dlq_A           72 CQETFRRRMELRLHMV-SHTGEMPYKCSS   99 (124)
T ss_dssp             SCCEESSHHHHHHHHH-HHSSSCSEECSS
T ss_pred             CCCccCCHHHHHHHHH-HcCCCCCccCCC
Confidence            7777777777777764 455566666664

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.62  E-value=4.5e-16  Score=119.59  Aligned_cols=88  Identities=24%  Similarity=0.462  Sum_probs=78.7

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhCc--C----cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCcee
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNAR--H----TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYE  133 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~--H----~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~  133 (253)
                      .|.++++|.|++  |++.|.+...|..|+...  |    .|.|.+|++.|.+...|..|+..          |.++++|.
T Consensus        29 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~----------h~~~~~~~   96 (124)
T 2dlq_A           29 KHTGEKPFECPK--CGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVS----------HTGEMPYK   96 (124)
T ss_dssp             HHSSCCSCBCTT--TCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHH----------HSSSCSEE
T ss_pred             hCCCCCCeECCC--CCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHH----------cCCCCCcc
Confidence            467789999988  999999999999999742  2    39999999999999999999974          56889999


Q ss_pred             cCccccCCcCCChhHHHhHHhhhcCCCC
Q 025436          134 CLVEGCGLKFKNYKSRQQHLVDKHKFPT  161 (253)
Q Consensus       134 C~vegC~kkF~t~~~rk~Hl~~~H~~p~  161 (253)
                      |.+  |++.|.+...|+.|++.+|..+.
T Consensus        97 C~~--C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           97 CSS--CSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             CSS--SCCEESSHHHHHHHHHHTSSCSS
T ss_pred             CCC--ccchhCCHHHHHHHHHHHCCCCC
Confidence            977  99999999999999988898764

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.62  E-value=6e-16  Score=114.60  Aligned_cols=84  Identities=15%  Similarity=0.324  Sum_probs=74.3

Q ss_pred             cCCCcceEecCCCCCcccCChhHHHhhHhCcC---cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCcc
Q 025436           61 TEDGRRVCCPIVGCNARMRSLEEFEDHYNARH---TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVE  137 (253)
Q Consensus        61 h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H---~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~ve  137 (253)
                      +.++++|.|.+  |++.|.+...|..|++.++   .|.|..|++.|.+...|..|+..          |.++++|.|.+ 
T Consensus         3 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~----------h~~~~~~~C~~-   69 (96)
T 2dmd_A            3 SGSSGPHKCEV--CGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRI----------HSDERPFKCQI-   69 (96)
T ss_dssp             CCCCCCCCBTT--TTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHH----------SCCCCCEECSS-
T ss_pred             CCCCcCeECCC--CCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHH----------hCCCCCccCCC-
Confidence            35678999988  9999999999999998644   39999999999999999999974          56789999977 


Q ss_pred             ccCCcCCChhHHHhHHhhhcC
Q 025436          138 GCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       138 gC~kkF~t~~~rk~Hl~~~H~  158 (253)
                       |++.|.+...|..|++.+|.
T Consensus        70 -C~~~f~~~~~l~~H~~~h~~   89 (96)
T 2dmd_A           70 -CPYASRNSSQLTVHLRSHTG   89 (96)
T ss_dssp             -SSCEESSHHHHHHHHTTCCS
T ss_pred             -CCCccCCHHHHHHHHHHhcC
Confidence             99999999999999975443

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.61  E-value=6.1e-16  Score=119.61  Aligned_cols=92  Identities=23%  Similarity=0.454  Sum_probs=71.5

Q ss_pred             CcceEecCCCCCcccCChhHHHhhHhCcC--cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCC
Q 025436           64 GRRVCCPIVGCNARMRSLEEFEDHYNARH--TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGL  141 (253)
Q Consensus        64 ~k~f~C~~~gC~k~F~s~~~L~~H~~~~H--~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~k  141 (253)
                      .++|.|+...|++.|.+...|..|++++.  .|.|..|++.|.+...|..|+..          |.++++|.|.+++|++
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~----------h~~~~~~~C~~~~C~~   72 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLV----------HTGEKPFQCTFEGCGK   72 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHHHGGG----------TSCCCCEECCSTTCCC
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHHHHHH----------cCCCCCeeCCCCCCcC
Confidence            46788885568888888888888887531  38888888888888888888863          4577888888777888


Q ss_pred             cCCChhHHHhHHhhhcCCCCccccc
Q 025436          142 KFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       142 kF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      .|.+...|..|++ .|...++|.|.
T Consensus        73 ~f~~~~~l~~H~~-~h~~~~~~~C~   96 (124)
T 1ubd_C           73 RFSLDFNLRTHVR-IHTGDRPYVCP   96 (124)
T ss_dssp             EESCHHHHHHHHH-HHHCCCCCCCC
T ss_pred             ccCCHHHHHHHHH-HhCCCCceECC
Confidence            8888888888885 56667777773

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.61  E-value=7.6e-16  Score=118.09  Aligned_cols=87  Identities=17%  Similarity=0.371  Sum_probs=76.1

Q ss_pred             cccCCCcceEecCCCCCcccCChhHHHhhHhC--cCc----ccCCCCCccC--CCchhhhhhhhhhcchhhhhhhhcCCC
Q 025436           59 MVTEDGRRVCCPIVGCNARMRSLEEFEDHYNA--RHT----ASCSVCCRVY--PTSRLLSIHVSEAHDSFFQAKVARGYP  130 (253)
Q Consensus        59 ~~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~--~H~----~~Cs~C~ksF--~s~~~L~~Hi~e~Hd~~f~~~~h~gek  130 (253)
                      ..|+++++|.|.+  |++.|.+...|..|+++  ...    +.|.+|++.|  .+...|..|+..          |.+++
T Consensus        12 ~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~----------H~~~~   79 (115)
T 2dmi_A           12 SIFTGASKFRCKD--CSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGK----------EDAQK   79 (115)
T ss_dssp             CCCCCCCSEEBSS--SSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCS----------CCCCS
T ss_pred             eeeCCCCCEECCc--cCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhc----------cCCCc
Confidence            3688999999988  99999999999999985  221    4599999999  999999999963          57899


Q ss_pred             ceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436          131 MYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       131 ~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      ||.|.+  |++.|.+...|+.|++.+|.+
T Consensus        80 ~~~C~~--C~k~f~~~~~L~~H~~~hh~~  106 (115)
T 2dmi_A           80 VLKCMY--CGHSFESLQDLSVHMIKTKHY  106 (115)
T ss_dssp             SCBCSS--SCCBCSSHHHHHHHHHHTTTT
T ss_pred             ceECCC--CCCccCCHHHHHHHHHHhCCc
Confidence            999977  999999999999999877754

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.61  E-value=4.5e-16  Score=119.04  Aligned_cols=91  Identities=24%  Similarity=0.446  Sum_probs=77.4

Q ss_pred             CCCcceEecCCCCCcccCChhHHHhhHhCcC---cccCC--CCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           62 EDGRRVCCPIVGCNARMRSLEEFEDHYNARH---TASCS--VCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        62 ~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H---~~~Cs--~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      +++++|.|.+++|++.|.+...|..|+++.+   .|.|.  .|++.|.+...|..|+..          |.++++|.|.+
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~----------h~~~~~~~C~~   71 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR----------HTGVKPFQCKT   71 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHH----------HHCCCCEECTT
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHH----------cCCCCCccCCc
Confidence            4678999988889999999999999987532   38998  799999999999999874          55788999977


Q ss_pred             cccCCcCCChhHHHhHHhhhcCCCCcccc
Q 025436          137 EGCGLKFKNYKSRQQHLVDKHKFPTSFEF  165 (253)
Q Consensus       137 egC~kkF~t~~~rk~Hl~~~H~~p~~f~f  165 (253)
                        |++.|.+...|+.|++ .|...++|.|
T Consensus        72 --C~~~f~~~~~l~~H~~-~h~~~~~~~C   97 (119)
T 2jp9_A           72 --CQRKFSRSDHLKTHTR-THTGEKPFSC   97 (119)
T ss_dssp             --TCCEESCHHHHHHHHH-HHHTCCCEEC
T ss_pred             --cCchhCCHHHHHHHHH-HhcCCCCeeC
Confidence              9999999999999986 6777788888

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.61  E-value=1.3e-15  Score=115.00  Aligned_cols=90  Identities=16%  Similarity=0.300  Sum_probs=78.5

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhCcC---cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNARH---TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H---~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      ...++++|.|.+  |++.|.+...|..|+++++   .|.|.+|++.|.+...|..|+..          |.++++|.|.+
T Consensus        11 ~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~----------h~~~~~~~C~~   78 (106)
T 2ee8_A           11 PSKTKKEFICKF--CGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYI----------HSKEKPFKCQE   78 (106)
T ss_dssp             CCCCCCCCBCSS--SCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGG----------SCCCCTTSCSS
T ss_pred             CcCCCcCeECCC--CCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHH----------hCCCCCeECCC
Confidence            345678999998  9999999999999998643   39999999999999999999974          56789999977


Q ss_pred             cccCCcCCChhHHHhHHhhhcCCCCccc
Q 025436          137 EGCGLKFKNYKSRQQHLVDKHKFPTSFE  164 (253)
Q Consensus       137 egC~kkF~t~~~rk~Hl~~~H~~p~~f~  164 (253)
                        |++.|.+...|..|++ +|...++|.
T Consensus        79 --C~~~f~~~~~L~~H~~-~H~~~~~~~  103 (106)
T 2ee8_A           79 --CGKGFCQSRTLAVHKT-LHMQTSSPT  103 (106)
T ss_dssp             --SCCCCSSHHHHHHHHH-HTTSCCCCC
T ss_pred             --cCCcccCHHHHHHHHH-HhCCCCCCc
Confidence              9999999999999985 777777664

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.1e-15  Score=116.31  Aligned_cols=85  Identities=20%  Similarity=0.385  Sum_probs=75.8

Q ss_pred             cccCCCcceEecCCCCCcccCChhHHHhhHhCcC---cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecC
Q 025436           59 MVTEDGRRVCCPIVGCNARMRSLEEFEDHYNARH---TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECL  135 (253)
Q Consensus        59 ~~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H---~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~  135 (253)
                      ..|+++++|.| .  |++.|.+...|..|++.++   .|.|.+|++.|.+...|..|+..          |.++++|.|.
T Consensus         3 ~~h~~~k~~~C-~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~----------h~~~~~~~C~   69 (110)
T 2csh_A            3 SGSSGDKLYPC-Q--CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI----------HTGIKPYECN   69 (110)
T ss_dssp             CCCCCCCCEEC-T--TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTT----------TCCCCCEECS
T ss_pred             CCCCCCCCEec-c--CCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHH----------cCCCCCeeCC
Confidence            35889999999 7  9999999999999998643   39999999999999999999974          5678999997


Q ss_pred             ccccCCcCCChhHHHhHHhhhcC
Q 025436          136 VEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       136 vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      +  |++.|.+...|..|++.+|.
T Consensus        70 ~--C~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           70 I--CAKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             S--SCCEESCHHHHHHHHHHHHH
T ss_pred             C--CcchhcCHHHHHHHHHHccc
Confidence            7  99999999999999986653

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.58  E-value=1.2e-15  Score=121.99  Aligned_cols=98  Identities=20%  Similarity=0.393  Sum_probs=80.1

Q ss_pred             ccCCCcceEecCCCC---CcccCChhHHHhhHhCcC---cccCCC--CCccCCCchhhhhhhhhhcchhhhhhhhcCCCc
Q 025436           60 VTEDGRRVCCPIVGC---NARMRSLEEFEDHYNARH---TASCSV--CCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPM  131 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC---~k~F~s~~~L~~H~~~~H---~~~Cs~--C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~  131 (253)
                      .|.++++|.|++.+|   ++.|.+...|..|+++.+   .|.|..  |++.|.+...|..|++.          |.++++
T Consensus        28 ~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~----------h~~~~~   97 (155)
T 2gli_A           28 IHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRS----------HTGEKP   97 (155)
T ss_dssp             SSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHH----------TTTCCC
T ss_pred             cCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHH----------cCCCCC
Confidence            567788899887666   488999999999987533   388975  99999999999999863          567888


Q ss_pred             eecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          132 YECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       132 y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      |.|.+++|++.|.+...|..|+..+|...++|.|+.
T Consensus        98 ~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~  133 (155)
T 2gli_A           98 YMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKL  133 (155)
T ss_dssp             EECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCS
T ss_pred             eeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCC
Confidence            999877799999999999999866888888888875

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.57  E-value=2.3e-15  Score=120.33  Aligned_cols=89  Identities=18%  Similarity=0.424  Sum_probs=71.3

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhCcC---cccCCC--CCccCCCchhhhhhhhhhcchhhhhhhhcCCCceec
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNARH---TASCSV--CCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYEC  134 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H---~~~Cs~--C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C  134 (253)
                      .|.++++|.|++++|++.|.+...|..|+++++   .|.|..  |++.|.+...|..|+..         .|.++++|.|
T Consensus        61 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~---------~H~~~~~~~C  131 (155)
T 2gli_A           61 RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNR---------THSNEKPYVC  131 (155)
T ss_dssp             HHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHH---------TTCSCCCEEC
T ss_pred             hcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHH---------hcCCCCCeeC
Confidence            467788888887678888888888888887533   388887  88888888888888843         3567888888


Q ss_pred             CccccCCcCCChhHHHhHHhhhc
Q 025436          135 LVEGCGLKFKNYKSRQQHLVDKH  157 (253)
Q Consensus       135 ~vegC~kkF~t~~~rk~Hl~~~H  157 (253)
                      .+++|++.|.+...|+.|++.+|
T Consensus       132 ~~~~C~~~f~~~~~L~~H~~~hh  154 (155)
T 2gli_A          132 KLPGCTKRYTDPSSLRKHVKTVH  154 (155)
T ss_dssp             CSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCCCCccccCCHHHHHHHHHhhc
Confidence            77778888888888888887665

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.56  E-value=1.8e-15  Score=115.62  Aligned_cols=87  Identities=20%  Similarity=0.394  Sum_probs=75.3

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhCcC---cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNARH---TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H---~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      .|.++++|.|+++.|++.|.+...|..|+++.+   .|.|.+|++.|.+...|..|++.          |.++++|.|..
T Consensus        30 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~----------h~~~~~~~C~~   99 (119)
T 2jp9_A           30 KHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRT----------HTGEKPFSCRW   99 (119)
T ss_dssp             HHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHH----------HHTCCCEECCS
T ss_pred             hhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHH----------hcCCCCeeCCC
Confidence            366788999996669999999999999998633   39999999999999999999973          56889999944


Q ss_pred             cccCCcCCChhHHHhHHhhhc
Q 025436          137 EGCGLKFKNYKSRQQHLVDKH  157 (253)
Q Consensus       137 egC~kkF~t~~~rk~Hl~~~H  157 (253)
                      +.|++.|.+...|..|++ +|
T Consensus       100 ~~C~~~f~~~~~L~~H~~-~H  119 (119)
T 2jp9_A          100 PSCQKKFARSDELVRHHN-MH  119 (119)
T ss_dssp             TTCCCEESSHHHHHHHHH-TC
T ss_pred             CCCccccCCHHHHHHHHh-cC
Confidence            449999999999999986 44

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.56  E-value=2.2e-15  Score=108.00  Aligned_cols=77  Identities=18%  Similarity=0.364  Sum_probs=69.2

Q ss_pred             ceEecCCCCCcccCChhHHHhhHhCcC---cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCc
Q 025436           66 RVCCPIVGCNARMRSLEEFEDHYNARH---TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLK  142 (253)
Q Consensus        66 ~f~C~~~gC~k~F~s~~~L~~H~~~~H---~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kk  142 (253)
                      ||.|.+  |++.|.+...|..|+++.+   .|.|..|++.|.+...|..|+..          |.++++|.|.+  |++.
T Consensus         1 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~----------h~~~~~~~C~~--C~~~   66 (82)
T 2kmk_A            1 SFDCKI--CGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFI----------HTGEKPHKCQV--CGKA   66 (82)
T ss_dssp             CEECSS--SCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHH----------HHTCCCEECTT--TSCE
T ss_pred             CccCCC--CcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHH----------hcCCCCCcCCC--cchh
Confidence            689988  9999999999999998632   49999999999999999999973          56889999977  9999


Q ss_pred             CCChhHHHhHHhhh
Q 025436          143 FKNYKSRQQHLVDK  156 (253)
Q Consensus       143 F~t~~~rk~Hl~~~  156 (253)
                      |.+...|..|++.+
T Consensus        67 f~~~~~l~~H~~~H   80 (82)
T 2kmk_A           67 FSQSSNLITHSRKH   80 (82)
T ss_dssp             ESSHHHHHHHHHHH
T ss_pred             hCChHHHHHHHHhh
Confidence            99999999999744

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.56  E-value=5.7e-15  Score=118.52  Aligned_cols=93  Identities=18%  Similarity=0.289  Sum_probs=65.6

Q ss_pred             CCCcceEecCCCCCcccCChhHHHhhHhCcCc------------ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCC
Q 025436           62 EDGRRVCCPIVGCNARMRSLEEFEDHYNARHT------------ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGY  129 (253)
Q Consensus        62 ~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H~------------~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~ge  129 (253)
                      ....+|.|..  |++.|.+...|..|+++.|.            |.|..|++.|.+...|..|+..          |.++
T Consensus        21 ~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~----------h~~~   88 (155)
T 2rpc_A           21 EAQLSRPKKS--CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRV----------HTGE   88 (155)
T ss_dssp             TTCCSSSCCC--CCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHH----------HHCC
T ss_pred             hhhccccccc--CCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHh----------cCCC
Confidence            3456677766  88888888888888765442            5677788888888888888763          4566


Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      ++|.|.+++|++.|.+...|..|++ .|...++|.|..
T Consensus        89 ~~~~C~~~~C~~~f~~~~~L~~H~~-~h~~~~~~~C~~  125 (155)
T 2rpc_A           89 KPFPCPFPGCGKIFARSENLKIHKR-THTGEKPFKCEF  125 (155)
T ss_dssp             CSEECSCTTTCCEESCHHHHHHHHT-TTCSSCSBCCSS
T ss_pred             CcccCCcCCCCCccCCHHHHHHHHH-hhCCCCCccCCC
Confidence            7777766667777777777777764 566666666653

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.55  E-value=4.1e-15  Score=114.94  Aligned_cols=88  Identities=20%  Similarity=0.404  Sum_probs=74.1

Q ss_pred             CCcceEecCCCCCcccCChhHHHhhHhCcC---cccCCC--CCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCcc
Q 025436           63 DGRRVCCPIVGCNARMRSLEEFEDHYNARH---TASCSV--CCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVE  137 (253)
Q Consensus        63 ~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H---~~~Cs~--C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~ve  137 (253)
                      +.++|.|.+  |++.|.+...|..|+++++   .|.|..  |++.|.+...|..|++.          |.++++|.|.++
T Consensus        31 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~----------h~~~~~~~C~~~   98 (124)
T 1ubd_C           31 GPRVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRI----------HTGDRPYVCPFD   98 (124)
T ss_dssp             SCCCEECTT--TCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHH----------HHCCCCCCCCST
T ss_pred             CCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHH----------hCCCCceECCCC
Confidence            678999988  9999999999999998643   399986  99999999999999973          568899999877


Q ss_pred             ccCCcCCChhHHHhHHhhhcCCCCcc
Q 025436          138 GCGLKFKNYKSRQQHLVDKHKFPTSF  163 (253)
Q Consensus       138 gC~kkF~t~~~rk~Hl~~~H~~p~~f  163 (253)
                      +|++.|.+...|..|++ .|...+++
T Consensus        99 ~C~~~f~~~~~L~~H~~-~H~~~k~~  123 (124)
T 1ubd_C           99 GCNKKFAQSTNLKSHIL-THAKAKNN  123 (124)
T ss_dssp             TCCCCCSSTTTTHHHHH-HHC-----
T ss_pred             CCCCccCCHHHHHHHHH-HHcccccC
Confidence            79999999999999997 56555543

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.55  E-value=7.2e-15  Score=121.92  Aligned_cols=89  Identities=21%  Similarity=0.431  Sum_probs=60.0

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhCcC-----cccC--CCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCce
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNARH-----TASC--SVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMY  132 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H-----~~~C--s~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y  132 (253)
                      .|.++++|.|..+.|++.|.+...|..|++..|     .|.|  ..|++.|.+...|..|++          .|.++++|
T Consensus        66 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~----------~H~~~~~~  135 (190)
T 1tf6_A           66 THTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQF----------SHTQQLPY  135 (190)
T ss_dssp             TTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHG----------GGSSSCSS
T ss_pred             HccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHH----------HhCCCCCc
Confidence            456666777763347777777777777764444     2667  667777777777777765          35567778


Q ss_pred             ecCccccCCcCCChhHHHhHHhhhcC
Q 025436          133 ECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       133 ~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      .|.+++|++.|.+...|+.|++.+++
T Consensus       136 ~C~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A          136 ECPHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             BCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             cCCCCCCCchhcCHHHHHHHHHHhCC
Confidence            88666688888888888888764333

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.54  E-value=3e-15  Score=120.13  Aligned_cols=88  Identities=23%  Similarity=0.428  Sum_probs=78.7

Q ss_pred             eEecCCCCCcccCChhHHHhhHhCcC---cccCCC--CCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCC
Q 025436           67 VCCPIVGCNARMRSLEEFEDHYNARH---TASCSV--CCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGL  141 (253)
Q Consensus        67 f~C~~~gC~k~F~s~~~L~~H~~~~H---~~~Cs~--C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~k  141 (253)
                      |.|.+  |++.|.+...|..|+++++   .|.|..  |++.|.+...|..|++.          |.++++|.|.+++|++
T Consensus        63 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~----------h~~~~~~~C~~~~C~k  130 (155)
T 2rpc_A           63 EECPR--EGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRT----------HTGEKPFKCEFEGCDR  130 (155)
T ss_dssp             TTCTT--SSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTT----------TCSSCSBCCSSTTCCC
T ss_pred             cCCCC--cccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHh----------hCCCCCccCCCCCCCC
Confidence            88988  9999999999999998633   399998  99999999999999973          5688999998878999


Q ss_pred             cCCChhHHHhHHhhhcCCCCcccccc
Q 025436          142 KFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       142 kF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.+...|..|++ +|...++|.|++
T Consensus       131 ~f~~~~~L~~H~~-~H~~~k~~~c~g  155 (155)
T 2rpc_A          131 RFANSSDRKKHMH-VHTSDKSGPSSG  155 (155)
T ss_dssp             CBSSHHHHHHSST-TTTSCCCSCSCC
T ss_pred             ccCCHHHHHHHHH-HhcCCCCCCCCC
Confidence            9999999999986 788889998863

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.53  E-value=1e-14  Score=106.20  Aligned_cols=81  Identities=19%  Similarity=0.399  Sum_probs=72.3

Q ss_pred             CcceEecCCCCCcccCChhHHHhhHhCcC---cccCC--CCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccc
Q 025436           64 GRRVCCPIVGCNARMRSLEEFEDHYNARH---TASCS--VCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEG  138 (253)
Q Consensus        64 ~k~f~C~~~gC~k~F~s~~~L~~H~~~~H---~~~Cs--~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~veg  138 (253)
                      .++|.|.+++|++.|.+...|..|++.++   .|.|.  .|++.|.+...|..|+.          .|.++++|.|.+  
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~----------~h~~~~~~~C~~--   70 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYR----------KHTGHRPFQCQK--   70 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHH----------HHHCCCCEECSS--
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHH----------HcCCCCCccCCC--
Confidence            46899999999999999999999998643   39997  69999999999999996          367889999977  


Q ss_pred             cCCcCCChhHHHhHHhhhc
Q 025436          139 CGLKFKNYKSRQQHLVDKH  157 (253)
Q Consensus       139 C~kkF~t~~~rk~Hl~~~H  157 (253)
                      |++.|.+...|..|++ .|
T Consensus        71 C~~~f~~~~~l~~H~~-~H   88 (89)
T 2wbs_A           71 CDRAFSRSDHLALHMK-RH   88 (89)
T ss_dssp             SSCEESSHHHHHHHGG-GG
T ss_pred             CCcccCCHHHHHHHHH-hh
Confidence            9999999999999986 55

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.53  E-value=3.8e-15  Score=123.58  Aligned_cols=93  Identities=17%  Similarity=0.375  Sum_probs=80.5

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhCcC---cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNARH---TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H---~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      .|.++++|.|.+  |++.|.+...|..|+++.+   .|.|..|++.|.+...|..|+..          |.++++|.|.+
T Consensus        71 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~----------h~~~~~~~C~~  138 (190)
T 2i13_A           71 THTGEKPYKCPE--CGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRT----------HTGEKPYKCPE  138 (190)
T ss_dssp             HHHCCCCEECTT--TCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHH----------HHCCCCEECTT
T ss_pred             hcCCCCCccCcc--cCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHH----------hCCCCCeECCC
Confidence            467889999988  9999999999999997643   39999999999999999999974          56788999977


Q ss_pred             cccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          137 EGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       137 egC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                        |++.|.+...|..|++ .|...++|.|..
T Consensus       139 --C~~~f~~~~~L~~H~~-~H~~~~~~~C~~  166 (190)
T 2i13_A          139 --CGKSFSREDNLHTHQR-THTGEKPYKCPE  166 (190)
T ss_dssp             --TCCEESCHHHHHHHHH-HHHCCCCEECTT
T ss_pred             --CCcccCCHHHHHHHHH-hcCCCCCeECCC
Confidence              9999999999999986 677788898886

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.52  E-value=1.4e-14  Score=107.66  Aligned_cols=83  Identities=20%  Similarity=0.395  Sum_probs=73.3

Q ss_pred             CCCcceEecCCCCCcccCChhHHHhhHhCcC---cccCC--CCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           62 EDGRRVCCPIVGCNARMRSLEEFEDHYNARH---TASCS--VCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        62 ~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H---~~~Cs--~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      ...++|.|.+++|++.|.+...|..|+++++   .|.|.  .|++.|.+...|..|+..          |.++++|.|.+
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~----------h~~~~~~~C~~   80 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRK----------HTGAKPFQCGV   80 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHH----------HTSCCSCBCSS
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHH----------hCCCCCeECCC
Confidence            4567899999899999999999999998643   39996  699999999999999973          56889999977


Q ss_pred             cccCCcCCChhHHHhHHhhh
Q 025436          137 EGCGLKFKNYKSRQQHLVDK  156 (253)
Q Consensus       137 egC~kkF~t~~~rk~Hl~~~  156 (253)
                        |++.|.+...|..|++.+
T Consensus        81 --C~~~f~~~~~l~~H~~~H   98 (100)
T 2ebt_A           81 --CNRSFSRSDHLALHMKRH   98 (100)
T ss_dssp             --SCCBCSSHHHHHHHHHHH
T ss_pred             --CcCccCCHHHHHHHHHHh
Confidence              999999999999999643

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.51  E-value=6.2e-15  Score=122.28  Aligned_cols=93  Identities=17%  Similarity=0.385  Sum_probs=80.1

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhCcC---cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNARH---TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H---~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      .|.++++|.|++  |++.|.+...|..|+++.+   .|.|..|++.|.+...|..|+..          |.++++|.|.+
T Consensus        43 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~----------h~~~~~~~C~~  110 (190)
T 2i13_A           43 THTGEKPYKCPE--CGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRT----------HTGEKPYACPE  110 (190)
T ss_dssp             CC---CCEECTT--TCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHH----------HHTCCCEECTT
T ss_pred             HcCCCCCccCCC--cCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHh----------cCCCCCCcCCC
Confidence            577889999988  9999999999999997643   39999999999999999999974          56788999977


Q ss_pred             cccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          137 EGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       137 egC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                        |++.|.+...|..|++ .|...++|.|+.
T Consensus       111 --C~~~f~~~~~l~~H~~-~h~~~~~~~C~~  138 (190)
T 2i13_A          111 --CGKSFSQLAHLRAHQR-THTGEKPYKCPE  138 (190)
T ss_dssp             --TCCEESSHHHHHHHHH-HHHCCCCEECTT
T ss_pred             --CCCccCCHHHHHHHHH-HhCCCCCeECCC
Confidence              9999999999999986 677788999986

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.48  E-value=3.3e-14  Score=117.87  Aligned_cols=99  Identities=21%  Similarity=0.368  Sum_probs=74.0

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhCcC---cccCC--CCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceec
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNARH---TASCS--VCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYEC  134 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H---~~~Cs--~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C  134 (253)
                      .|.++++|.|..+.|++.|.+...|..|+++++   .|.|.  .|++.|.+...|..|+...|        ..++++|.|
T Consensus        36 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h--------~~~~~~~~C  107 (190)
T 1tf6_A           36 KHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFH--------NIKICVYVC  107 (190)
T ss_dssp             HHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTS--------STTTSCCEE
T ss_pred             hcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhc--------CCCcceeeC
Confidence            356778888843348888888888888887543   38888  78888888888888885544        135678888


Q ss_pred             CccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          135 LVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       135 ~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .++.|++.|.+...|+.|++ .|...++|.|..
T Consensus       108 ~~~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~  139 (190)
T 1tf6_A          108 HFENCGKAFKKHNQLKVHQF-SHTQQLPYECPH  139 (190)
T ss_dssp             CSSSSCEECSSHHHHHHHHG-GGSSSCSSBCCS
T ss_pred             CCCCCccccCCHHHHHHHHH-HhCCCCCccCCC
Confidence            44448888888888888875 677778888854

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=4.4e-14  Score=101.10  Aligned_cols=71  Identities=18%  Similarity=0.356  Sum_probs=63.1

Q ss_pred             CCCcceEecCCCCCcccCChhHHHhhHhCcC----cccCCC--CCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecC
Q 025436           62 EDGRRVCCPIVGCNARMRSLEEFEDHYNARH----TASCSV--CCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECL  135 (253)
Q Consensus        62 ~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H----~~~Cs~--C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~  135 (253)
                      +++++|.|..++|++.|.+...|..|++..|    .|.|..  |++.|.+...|..|++.          |.++++|.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~----------H~~~~~~~C~   72 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKL----------HSDTRDYICE   72 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHH----------HHTSCCCSCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHH----------hCCCCCeeCC
Confidence            5678999999999999999999999997435    399999  99999999999999973          5688999997


Q ss_pred             ccccCCcCC
Q 025436          136 VEGCGLKFK  144 (253)
Q Consensus       136 vegC~kkF~  144 (253)
                      +  |++.|.
T Consensus        73 ~--C~k~F~   79 (79)
T 2dlk_A           73 F--SGPSSG   79 (79)
T ss_dssp             S--SSCCCC
T ss_pred             C--CCCCCC
Confidence            7  999983

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.44  E-value=6.3e-14  Score=100.71  Aligned_cols=79  Identities=18%  Similarity=0.410  Sum_probs=67.7

Q ss_pred             ceEecCCCCCcccCChhHHHhhHhCcC---cccCCC--CCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccc-c
Q 025436           66 RVCCPIVGCNARMRSLEEFEDHYNARH---TASCSV--CCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEG-C  139 (253)
Q Consensus        66 ~f~C~~~gC~k~F~s~~~L~~H~~~~H---~~~Cs~--C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~veg-C  139 (253)
                      ||.|+++.|++.|.+...|..|+++.+   .|.|..  |++.|.+...|..|++.          |.+   |.|.+.+ |
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~----------h~~---~~C~~~~~C   67 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKV----------HAG---YPCKKDDSC   67 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHH----------HHS---EECCSCSSC
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHH----------hCC---CCCCCCCCC
Confidence            689955559999999999999997532   399988  99999999999999974          445   9996655 9


Q ss_pred             CCcCCChhHHHhHHhhhc
Q 025436          140 GLKFKNYKSRQQHLVDKH  157 (253)
Q Consensus       140 ~kkF~t~~~rk~Hl~~~H  157 (253)
                      ++.|.+...|..|++.+|
T Consensus        68 ~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           68 SFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             CCEESSHHHHHHHHHHCC
T ss_pred             CCccCCHHHHHHHHHhcC
Confidence            999999999999997654

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.42  E-value=3.7e-15  Score=109.70  Aligned_cols=82  Identities=13%  Similarity=0.181  Sum_probs=72.2

Q ss_pred             CcceEecCCCCCcccCChhHHHhhHhCcC---cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccC
Q 025436           64 GRRVCCPIVGCNARMRSLEEFEDHYNARH---TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCG  140 (253)
Q Consensus        64 ~k~f~C~~~gC~k~F~s~~~L~~H~~~~H---~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~  140 (253)
                      ++||.|.+  |++.|.+...|..|+++++   .|.|..|++.|.+...|..|+..+|           ..+|.|..  |+
T Consensus         1 ek~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~-----------~~~~~c~~--C~   65 (88)
T 1llm_C            1 MKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-----------ILPILEDK--VE   65 (88)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHT-----------HHHHHHHH--HH
T ss_pred             CCCCcCCC--CCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhC-----------CCcchHHH--HH
Confidence            47899988  9999999999999998632   3999999999999999999998654           26899966  99


Q ss_pred             CcCCChhHHHhHHhhhcCCC
Q 025436          141 LKFKNYKSRQQHLVDKHKFP  160 (253)
Q Consensus       141 kkF~t~~~rk~Hl~~~H~~p  160 (253)
                      +.|.+...|..|++..|+.+
T Consensus        66 ~~f~~~~~L~~H~~~~h~~~   85 (88)
T 1llm_C           66 ELLSKNYHLENEVARLKKLV   85 (88)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHhhhHHHHHHHHHHh
Confidence            99999999999999888643

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.31  E-value=1.1e-12  Score=92.91  Aligned_cols=56  Identities=27%  Similarity=0.471  Sum_probs=42.0

Q ss_pred             cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCC
Q 025436           93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPT  161 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~  161 (253)
                      .|.|.+|+++|.+...|..|++          .|+|++||.|.+  ||+.|....+|+.|++ +|.+.+
T Consensus         4 py~C~~C~k~F~~~~~L~~H~~----------~Ht~ekp~~C~~--C~k~F~~~~~L~~H~~-~Htgep   59 (60)
T 4gzn_C            4 PFFCNFCGKTYRDASGLSRHRR----------AHLGYRPRSCPE--CGKCFRDQSEVNRHLK-VHQNKP   59 (60)
T ss_dssp             CEECTTTCCEESSHHHHHHHHH----------HHHTCCCEECTT--TCCEESSHHHHHHHGG-GGSCC-
T ss_pred             CccCCCCCCEeCCHHHHHHHHH----------HhCCCcCeECCC--CCCCcCCHHHHHHHhC-ccCCCC
Confidence            3566666666666666666665          478899999977  9999999999999985 676543

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=4.8e-12  Score=91.35  Aligned_cols=70  Identities=17%  Similarity=0.354  Sum_probs=55.1

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhCcC-------cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCce
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNARH-------TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMY  132 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H-------~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y  132 (253)
                      .|+++++|.|.+  |++.|.+...|..|++..|       .|.|.+|++.|.+...|..|+..          |.++++|
T Consensus         9 ~H~~~k~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~----------h~~~~~~   76 (86)
T 1x6h_A            9 THTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADN----------CAGPDGV   76 (86)
T ss_dssp             TCCCCCCEECSS--SSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHH----------CCCCCSC
T ss_pred             eecCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHH----------ccCCCCc
Confidence            577888899987  9999999999998886544       27888888888888888888863          4567788


Q ss_pred             ecCccccCCcC
Q 025436          133 ECLVEGCGLKF  143 (253)
Q Consensus       133 ~C~vegC~kkF  143 (253)
                      .|..  |+..|
T Consensus        77 ~~~~--~~~~~   85 (86)
T 1x6h_A           77 EGEN--SGPSS   85 (86)
T ss_dssp             CCCC--CCCCC
T ss_pred             ccCC--CCCCC
Confidence            8855  87765

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.25  E-value=2.7e-12  Score=99.90  Aligned_cols=63  Identities=19%  Similarity=0.296  Sum_probs=50.1

Q ss_pred             CCCcceEecCCCCCcccCChhHHHhhHhCcC-------cccCCCCCccCCCchhhhhh-hhhhcchhhhhhhhcCCCcee
Q 025436           62 EDGRRVCCPIVGCNARMRSLEEFEDHYNARH-------TASCSVCCRVYPTSRLLSIH-VSEAHDSFFQAKVARGYPMYE  133 (253)
Q Consensus        62 ~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H-------~~~Cs~C~ksF~s~~~L~~H-i~e~Hd~~f~~~~h~gek~y~  133 (253)
                      +|++||.|..  |+++|.+...|..|++..|       .|.|++|+++|.+...|..| ++          .|+|++||.
T Consensus        14 ~gekpy~C~~--Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r----------~Htgekpy~   81 (102)
T 2ghf_A           14 KVEGGYECKY--CTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLK----------YHPGEENFK   81 (102)
T ss_dssp             CCCSSEECSS--CSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHH----------TSTTCCCEE
T ss_pred             CCCcCcCCCC--CCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHH----------hcCCCCCee
Confidence            6788999987  9999999999999986434       37888888888888888888 44          357788888


Q ss_pred             cCc
Q 025436          134 CLV  136 (253)
Q Consensus       134 C~v  136 (253)
                      |.+
T Consensus        82 C~~   84 (102)
T 2ghf_A           82 LTM   84 (102)
T ss_dssp             EEE
T ss_pred             CCc
Confidence            876

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.24  E-value=5.4e-12  Score=90.40  Aligned_cols=53  Identities=17%  Similarity=0.364  Sum_probs=33.4

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhCcC---cccCCCCCccCCCchhhhhhhh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNARH---TASCSVCCRVYPTSRLLSIHVS  114 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H---~~~Cs~C~ksF~s~~~L~~Hi~  114 (253)
                      .+.++++|.|.+  |++.|.+...|..|+++++   .|.|.+|++.|.+...|..|++
T Consensus        12 ~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~   67 (77)
T 2cot_A           12 QQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHR   67 (77)
T ss_dssp             CCCCSCSSBCSS--SCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGG
T ss_pred             cCCCCCCEECCC--CCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHH
Confidence            345567777766  7777777777777775422   2556666666666666666654

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.20  E-value=6e-12  Score=89.04  Aligned_cols=49  Identities=22%  Similarity=0.510  Sum_probs=45.6

Q ss_pred             CcceEecCCCCCcccCChhHHHhhHhCcC----cccCCCCCccCCCchhhhhhhhh
Q 025436           64 GRRVCCPIVGCNARMRSLEEFEDHYNARH----TASCSVCCRVYPTSRLLSIHVSE  115 (253)
Q Consensus        64 ~k~f~C~~~gC~k~F~s~~~L~~H~~~~H----~~~Cs~C~ksF~s~~~L~~Hi~e  115 (253)
                      |+||.|.+  |+++|.+...|..|+++ |    .|.|.+|+++|.+...|..|++.
T Consensus         2 EKpy~C~~--C~k~F~~~~~L~~H~~~-Ht~ekp~~C~~C~k~F~~~~~L~~H~~~   54 (60)
T 4gzn_C            2 ERPFFCNF--CGKTYRDASGLSRHRRA-HLGYRPRSCPECGKCFRDQSEVNRHLKV   54 (60)
T ss_dssp             CCCEECTT--TCCEESSHHHHHHHHHH-HHTCCCEECTTTCCEESSHHHHHHHGGG
T ss_pred             CCCccCCC--CCCEeCCHHHHHHHHHH-hCCCcCeECCCCCCCcCCHHHHHHHhCc
Confidence            69999998  99999999999999985 6    39999999999999999999973

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=5.3e-12  Score=95.28  Aligned_cols=77  Identities=22%  Similarity=0.269  Sum_probs=62.4

Q ss_pred             CCCcccCChhHHHhhHhCcC---cccCCCCCccCC-CchhhhhhhhhhcchhhhhhhhcC-CCceecCccccCCcCCChh
Q 025436           73 GCNARMRSLEEFEDHYNARH---TASCSVCCRVYP-TSRLLSIHVSEAHDSFFQAKVARG-YPMYECLVEGCGLKFKNYK  147 (253)
Q Consensus        73 gC~k~F~s~~~L~~H~~~~H---~~~Cs~C~ksF~-s~~~L~~Hi~e~Hd~~f~~~~h~g-ek~y~C~vegC~kkF~t~~  147 (253)
                      |++.++.....++.|++++.   .|.|.+|++.|. +...|..|++.          |.+ +++|.|.+  |++.|.+..
T Consensus         1 gss~s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~----------h~~~~~~~~C~~--C~k~F~~~~   68 (98)
T 2gqj_A            1 GSSGSSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEV----------CQKLQDALKCQH--CRKQFKSKA   68 (98)
T ss_dssp             CCCCCCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHH----------HHHHHHHHSCSS--SCCCCSCHH
T ss_pred             CCCCCCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHH----------HcCCCCCEECCC--CCCccCCHH
Confidence            45567788888889987532   399999999999 99999999974          345 78999977  999999999


Q ss_pred             HHHhHHhhhcCCCCc
Q 025436          148 SRQQHLVDKHKFPTS  162 (253)
Q Consensus       148 ~rk~Hl~~~H~~p~~  162 (253)
                      .|+.|++.+| ..++
T Consensus        69 ~L~~H~~~h~-~~kp   82 (98)
T 2gqj_A           69 GLNYHTMAEH-SAKP   82 (98)
T ss_dssp             HHHHHHHHHS-CSCS
T ss_pred             HHHHHHHHHc-CCCC
Confidence            9999997555 4444

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.18  E-value=7.5e-12  Score=89.66  Aligned_cols=58  Identities=16%  Similarity=0.403  Sum_probs=40.9

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcC-CCceecCccccCCcCCChhHHHhHHhhhcCCCCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARG-YPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTS  162 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~g-ek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~  162 (253)
                      |.|.+|++.|.+...|..|+...         |.+ +++|.|.+  |++.|.+...|+.|++.+|..+.+
T Consensus        16 ~~C~~C~k~f~~~~~L~~H~~~~---------h~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A           16 YECYICHARFTQSGTMKMHILQK---------HTENVAKFHCPH--CDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHH---------SSSSCSSEECSS--SSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             eECCCcCchhCCHHHHHHHHHHh---------cCCCCCccCCCC--CCCccCCHHHHHHHHHHhCCCCCC
Confidence            55555666666666666665433         334 47899976  999999999999999888876654

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.17  E-value=2.6e-11  Score=86.75  Aligned_cols=61  Identities=23%  Similarity=0.288  Sum_probs=54.5

Q ss_pred             CcccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccc
Q 025436           92 HTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEF  165 (253)
Q Consensus        92 H~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f  165 (253)
                      ..|.|.+|++.|.+...|..|++.          |.++++|.|.+  |++.|.+...|..|++ +|...++|.|
T Consensus        17 ~~~~C~~C~~~f~~~~~l~~H~~~----------h~~~~~~~C~~--C~~~f~~~~~L~~H~~-~H~~~~p~~C   77 (77)
T 2cot_A           17 RRYKCDECGKSFSHSSDLSKHRRT----------HTGEKPYKCDE--CGKAFIQRSHLIGHHR-VHTGSGPSSG   77 (77)
T ss_dssp             CSSBCSSSCCBCSCHHHHHHHHTT----------TCCSCSEECSS--SCCEESSHHHHHHHGG-GSCCCCCCCC
T ss_pred             CCEECCCCCcccCCHHHHHHHHHH----------cCCCcCeeCCC--CCCccCCHHHHHHHHH-HhCCCCCCCC
Confidence            359999999999999999999974          56789999977  9999999999999995 7888888875

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.16  E-value=1.8e-11  Score=95.21  Aligned_cols=70  Identities=20%  Similarity=0.386  Sum_probs=59.0

Q ss_pred             cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccccCC
Q 025436           93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFKKAH  170 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~~~~  170 (253)
                      .|.|..|++.|.+...|..|++..|..      ..+++||.|.+  ||+.|.+...|+.|++.+|...++|.|++...
T Consensus        18 py~C~~Cgk~F~~~~~L~~H~r~~H~~------~~~ekpf~C~~--Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           18 GYECKYCTFQTPDLNMFTFHVDSEHPN------VVLNSSYVCVE--CNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             SEECSSCSCEESCHHHHHHHHHHHCSS------CCCSCCEEETT--TTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             CcCCCCCCCccCCHHHHHHHHHhhCCC------CCCCCCcCCCC--CCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            499999999999999999999743310      05689999977  99999999999999546899999999998443

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.16  E-value=1.7e-11  Score=92.34  Aligned_cols=55  Identities=16%  Similarity=0.349  Sum_probs=44.2

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHhhhcCCC
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFP  160 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p  160 (253)
                      |.|.+|++.|.+...|..|++.          |++++||.|.+  |++.|.+...|++|+..+|..+
T Consensus        29 h~C~~Cgk~F~~~~~L~~H~~~----------H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           29 HLCPVCGESFASKGAQERHLRL----------LHAAQVFPCKY--CPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             EECTTSCCEESSHHHHHHHHHT----------TSCSSSEECTT--SSCEESSHHHHHHHHHTTCTTC
T ss_pred             EECCCCCCCcCcHHHHhhhhhh----------ccCCCccCCCC--CCCEeCCHHHHHHhCcccCcCC
Confidence            6777777777777777777763          56788999966  9999999999999988788654

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.15  E-value=2.7e-11  Score=92.17  Aligned_cols=75  Identities=21%  Similarity=0.301  Sum_probs=62.2

Q ss_pred             CcccCChhHHHhhHhCcC---cccCCCCCccC-CCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHH
Q 025436           75 NARMRSLEEFEDHYNARH---TASCSVCCRVY-PTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQ  150 (253)
Q Consensus        75 ~k~F~s~~~L~~H~~~~H---~~~Cs~C~ksF-~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk  150 (253)
                      ...|.....|+.|.+.++   .|.|.+|++.| .+...|..|++          .| ++++|.|.+  |++.|.....|+
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~----------~h-~~k~~~C~~--Cgk~F~~~~~L~   79 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHME----------NC-KQEMFTCHH--CGKQLRSLAGMK   79 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHH----------HH-CCCCCCCSS--SCCCCSSHHHHH
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHH----------HH-CCCCeECCC--CCCeeCCHHHHH
Confidence            346788888888886532   49999999999 99999999997          47 899999977  999999999999


Q ss_pred             hHHhhhcCCCCc
Q 025436          151 QHLVDKHKFPTS  162 (253)
Q Consensus       151 ~Hl~~~H~~p~~  162 (253)
                      .|++.+|...+.
T Consensus        80 ~H~~~~H~~~p~   91 (96)
T 2ctd_A           80 YHVMANHNSLPS   91 (96)
T ss_dssp             HHHHHHTCCCSS
T ss_pred             HHhHHhcCCCCC
Confidence            994468875433

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.15  E-value=1.4e-11  Score=99.31  Aligned_cols=78  Identities=15%  Similarity=0.276  Sum_probs=64.7

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhCcC----cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecC
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNARH----TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECL  135 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H----~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~  135 (253)
                      .|+++++|.|.+  |+++|.+...|..|+++ |    .|.|++|+++|.+...|..|++.+|..    ......++|.|.
T Consensus        44 ~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~-H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~----~p~~~~k~~~C~  116 (133)
T 2lt7_A           44 IHSWEKKYPCRY--CEKVFPLAEYRTKHEIH-HTGERRYQCLACGKSFINYQFMSSHIKSVHSQ----DPSGDSKLYRLH  116 (133)
T ss_dssp             HHHCCSCEECSS--SSCEESSHHHHHHHHHH-HHTCCCEEESSSCCEESSHHHHHHHHHHHTCC----CTTSSSCCEEEC
T ss_pred             HcCCCCCeeCCc--cCeecccccchhhhccc-cCCCccccCCCCCCCcCCHHHHHHHhHHhcCC----CCCCCCCCeecC
Confidence            578999999988  99999999999999975 5    499999999999999999999876521    001224679997


Q ss_pred             ccccCCcCCCh
Q 025436          136 VEGCGLKFKNY  146 (253)
Q Consensus       136 vegC~kkF~t~  146 (253)
                      +  |++.|...
T Consensus       117 ~--C~k~~~~~  125 (133)
T 2lt7_A          117 P--CRSLQIRQ  125 (133)
T ss_dssp             C--CCSSCCCC
T ss_pred             C--CCchhhhc
Confidence            7  99998764

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.14  E-value=3.8e-11  Score=85.30  Aligned_cols=64  Identities=22%  Similarity=0.442  Sum_probs=40.4

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhCcCcccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCcccc
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGC  139 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC  139 (253)
                      .+.++++|.|..  |++.|.+...|..|+++                                   |.++++|.|.+  |
T Consensus        11 ~~~~~~~~~C~~--C~k~f~~~~~l~~H~~~-----------------------------------H~~~~~~~C~~--C   51 (74)
T 2lce_A           11 MTHSDKPYKCDR--CQASFRYKGNLASHKTV-----------------------------------HTGEKPYRCNI--C   51 (74)
T ss_dssp             CCCCCCSBCCTT--SSCCBSCHHHHHHHHHH-----------------------------------HCCCCSEECTT--T
T ss_pred             ccCCCCCeECCC--CCceeCCHHHHHHHHHH-----------------------------------cCCCCCEECCC--C
Confidence            445566666655  66666666666666542                                   44566777755  7


Q ss_pred             CCcCCChhHHHhHHhhhcCCCCcc
Q 025436          140 GLKFKNYKSRQQHLVDKHKFPTSF  163 (253)
Q Consensus       140 ~kkF~t~~~rk~Hl~~~H~~p~~f  163 (253)
                      ++.|.+...|+.|++ .|...++|
T Consensus        52 ~k~f~~~~~L~~H~~-~H~~~kp~   74 (74)
T 2lce_A           52 GAQFNRPANLKTHTR-IHSGEKPY   74 (74)
T ss_dssp             CCEESCHHHHHHHHH-HHCCSCCC
T ss_pred             CchhCCHHHHHHHHH-hcCCCCCC
Confidence            777777777777764 55555544

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.14  E-value=3.4e-11  Score=80.87  Aligned_cols=54  Identities=28%  Similarity=0.547  Sum_probs=44.0

Q ss_pred             cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHhhhcC
Q 025436           93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      .|.|..|++.|.+...|..|+..          |.++++|.|.+  |++.|.+...|..|++.+|+
T Consensus         4 ~~~C~~C~~~f~~~~~l~~H~~~----------h~~~~~~~C~~--C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            4 SRECSYCGKFFRSNYYLNIHLRT----------HTGEKPYKCEF--CEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             -CBCTTTCCBCSCHHHHHHHHHH----------HHCCCCEECSS--SSCEESSHHHHHHHHHHHC-
T ss_pred             CccCCCCcchhCChHHHHHHHHH----------cCCCCCcCCCC--CcchhCCHHHHHHHHHHhcC
Confidence            47788888888888888888763          56788999977  99999999999999987763

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.13  E-value=6.9e-11  Score=83.68  Aligned_cols=61  Identities=18%  Similarity=0.311  Sum_probs=40.3

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhCcCcccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCcccc
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGC  139 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC  139 (253)
                      .|+++++|.|.+  |++.|.+...|..|+++                                   |.++++|.|.+  |
T Consensus         8 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~-----------------------------------h~~~~~~~C~~--C   48 (72)
T 1x6e_A            8 IHSGEKPYGCVE--CGKAFSRSSILVQHQRV-----------------------------------HTGEKPYKCLE--C   48 (72)
T ss_dssp             TTTTCCCEECSS--SCCEESSHHHHHHHHHG-----------------------------------GGCSCCEECSS--S
T ss_pred             ccCCCCCccCCC--CCCccCCHHHHHHHHHh-----------------------------------cCCCCCeECCC--C
Confidence            456666666665  66666666666666642                                   34567788866  8


Q ss_pred             CCcCCChhHHHhHHhhhcCC
Q 025436          140 GLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       140 ~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      ++.|.+...|+.|++.++..
T Consensus        49 ~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A           49 GKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             CCEESSHHHHHHHHHHHHSS
T ss_pred             CcccCCHHHHHHHHHhcCCC
Confidence            88888888888887644433

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.12  E-value=4e-11  Score=83.04  Aligned_cols=62  Identities=24%  Similarity=0.490  Sum_probs=41.9

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhCcCcccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCcccc
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGC  139 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC  139 (253)
                      .|+++++|.|+.  |++.|.+..+|..|++.                         .|        ..++++|.|.+  |
T Consensus         4 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~-------------------------~H--------~~~~~~~~C~~--C   46 (66)
T 2drp_A            4 TKEGEHTYRCKV--CSRVYTHISNFCRHYVT-------------------------SH--------KRNVKVYPCPF--C   46 (66)
T ss_dssp             EEEETTEEECTT--TCCEESSHHHHHHHHHH-------------------------HS--------SSSCCCEECTT--T
T ss_pred             ccCCCcceECCC--CcchhCCHHHHHHHHHH-------------------------Hc--------CCCCcCeECCC--C
Confidence            456666666655  66666666666666542                         11        14677888866  8


Q ss_pred             CCcCCChhHHHhHHhhhcC
Q 025436          140 GLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       140 ~kkF~t~~~rk~Hl~~~H~  158 (253)
                      ++.|.+...|..|++.+|+
T Consensus        47 ~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A           47 FKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CCEESCHHHHHHHHHHHTC
T ss_pred             CCccCCHHHHHHHHHHHcC
Confidence            8888888888888877765

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.11  E-value=3.6e-11  Score=85.38  Aligned_cols=29  Identities=21%  Similarity=0.441  Sum_probs=22.3

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhC
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      .|.++++|.|.+  |++.|.+...|..|+++
T Consensus        39 ~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~   67 (74)
T 2lce_A           39 VHTGEKPYRCNI--CGAQFNRPANLKTHTRI   67 (74)
T ss_dssp             HHCCCCSEECTT--TCCEESCHHHHHHHHHH
T ss_pred             HcCCCCCEECCC--CCchhCCHHHHHHHHHh
Confidence            467778888877  88888888888888754

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.10  E-value=7.4e-11  Score=80.18  Aligned_cols=55  Identities=22%  Similarity=0.382  Sum_probs=46.8

Q ss_pred             cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436           93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      .|.|..|++.|.+...|..|++.          |.++++|.|.+  |++.|.+...|..|+..+|..
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~----------h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRS----------HTNEKPYPCGL--CNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHT----------TTSSCSEECTT--TCCEESSHHHHHHHHTTTSCC
T ss_pred             cCcCCCCccccCCHHHHHHHHHH----------hCCCCCccCCC--CCCccCCHHHHHHHHHHHcCC
Confidence            47888999999999999999863          56788999977  999999999999998777864

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.10  E-value=8.5e-11  Score=78.91  Aligned_cols=52  Identities=21%  Similarity=0.437  Sum_probs=45.3

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHhhhc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKH  157 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H  157 (253)
                      |.|..|++.|.+...|..|+..          |.++++|.|.+  |++.|.+...|..|++.++
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~----------h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~   53 (57)
T 1bbo_A            2 YICEECGIRXKKPSMLKKHIRT----------HTDVRPYHCTY--CNFSFKTKGNLTKHMKSKA   53 (57)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHH----------TSSCCCEECSS--SSCEESSHHHHHHHHHSSS
T ss_pred             CcCCCCcCcCCCHHHHHHHHHh----------cCCCCCccCCC--CCchhcCHHHHHHHHHHhc
Confidence            7899999999999999999863          56789999977  9999999999999986444

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=7.9e-11  Score=84.27  Aligned_cols=66  Identities=18%  Similarity=0.291  Sum_probs=44.0

Q ss_pred             cCCCcceEecCCCCCcccCChhHHHhhHhCcCcccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccC
Q 025436           61 TEDGRRVCCPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCG  140 (253)
Q Consensus        61 h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~  140 (253)
                      |+++++|.|.+  |++.|.+...|..|+++                         ++       ...++++|.|.+  |+
T Consensus         2 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~-------------------------h~-------~~~~~~~~~C~~--C~   45 (78)
T 2d9h_A            2 SSGSSGLQCEI--CGFTCRQKASLNWHQRK-------------------------HA-------ETVAALRFPCEF--CG   45 (78)
T ss_dssp             CCSCCCEECSS--SCCEESSHHHHHHHHHH-------------------------HH-------HHTTTCCEECTT--TC
T ss_pred             CCCCcCeECCC--CCCeeCCHHHHHHHHHH-------------------------hh-------ccCCCcccCCCC--CC
Confidence            56667777766  66666666666666642                         11       011367888866  88


Q ss_pred             CcCCChhHHHhHHhhhcCCCCc
Q 025436          141 LKFKNYKSRQQHLVDKHKFPTS  162 (253)
Q Consensus       141 kkF~t~~~rk~Hl~~~H~~p~~  162 (253)
                      +.|.+...|..|++.+|....+
T Consensus        46 k~f~~~~~L~~H~~~~H~~~~~   67 (78)
T 2d9h_A           46 KRFEKPDSVAAHRSKSHPALLL   67 (78)
T ss_dssp             CEESSHHHHHHHHHHTSTTTSS
T ss_pred             chhCCHHHHHHHHHHhCCCCCC
Confidence            8888888888888777776544

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.07  E-value=1.4e-10  Score=81.44  Aligned_cols=58  Identities=17%  Similarity=0.278  Sum_probs=36.8

Q ss_pred             cCCCcceEecCCCCCcccCChhHHHhhHhCcCcccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccC
Q 025436           61 TEDGRRVCCPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCG  140 (253)
Q Consensus        61 h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~  140 (253)
                      |+++++|.|.+  |++.|.+...|..|+++                                   |.++++|.|.+  |+
T Consensus         4 ~~~~~~~~C~~--C~k~f~~~~~L~~H~~~-----------------------------------H~~~~~~~C~~--C~   44 (70)
T 1x5w_A            4 GSSGHPEKCSE--CSYSCSSKAALRIHERI-----------------------------------HCTDRPFKCNY--CS   44 (70)
T ss_dssp             CCCCCSEECSS--SSCEESSHHHHHHHHGG-----------------------------------GCCSCSEECSS--SS
T ss_pred             CCCCCCeECCC--CCcccCCHHHHHHHHHH-----------------------------------cCCCCCEeCCC--CC
Confidence            45666666665  66666666666666643                                   34556677755  77


Q ss_pred             CcCCChhHHHhHHhhhc
Q 025436          141 LKFKNYKSRQQHLVDKH  157 (253)
Q Consensus       141 kkF~t~~~rk~Hl~~~H  157 (253)
                      +.|.+...|+.|++.+|
T Consensus        45 ~~f~~~~~L~~H~~~h~   61 (70)
T 1x5w_A           45 FDTKQPSNLSKHMKKFH   61 (70)
T ss_dssp             CEESSHHHHHHHHHHHH
T ss_pred             CccCCHHHHHHHHHHHh
Confidence            77777777777765444

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.06  E-value=1.1e-10  Score=84.15  Aligned_cols=77  Identities=19%  Similarity=0.311  Sum_probs=60.7

Q ss_pred             HHHhhHhCcC---cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436           83 EFEDHYNARH---TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus        83 ~L~~H~~~~H---~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      .|..|++++.   .|.|.+|++.|.+...|..|+..+|..      ...+++|.|.+  |++.|.+...|..|++ .|..
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~------~~~~~~~~C~~--C~~~f~~~~~L~~H~~-~h~~   72 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP------NFVPAAFVCSK--CGKTFTRRNTMARHAD-NCAG   72 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS------SCCCCCEECSS--SCCEESCHHHHHHHHH-HCCC
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCC------cCCCcceECCC--CCChhCCHHHHHHHHH-HccC
Confidence            4667887532   399999999999999999999865420      01137999977  9999999999999996 6777


Q ss_pred             CCccccccc
Q 025436          160 PTSFEFFKK  168 (253)
Q Consensus       160 p~~f~f~~~  168 (253)
                      .+++.+..-
T Consensus        73 ~~~~~~~~~   81 (86)
T 1x6h_A           73 PDGVEGENS   81 (86)
T ss_dssp             CCSCCCCCC
T ss_pred             CCCcccCCC
Confidence            888887653

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.04  E-value=1.3e-10  Score=82.83  Aligned_cols=65  Identities=18%  Similarity=0.349  Sum_probs=57.1

Q ss_pred             cccCCC--CCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436           93 TASCSV--CCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus        93 ~~~Cs~--C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.|..  |++.|.+...|..|+...         |.++++|.|.+++|++.|.+...|+.|++ +|...++|.|+.
T Consensus         7 ~~~C~~~~C~~~f~~~~~L~~H~~~~---------H~~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~   73 (79)
T 2dlk_A            7 GMPCDFPGCGRIFSNRQYLNHHKKYQ---------HIHQKSFSCPEPACGKSFNFKKHLKEHMK-LHSDTRDYICEF   73 (79)
T ss_dssp             SEECSSTTTCCEESSHHHHHHHHHHG---------GGSCCCEECSCTTTCCEESSHHHHHHHHH-HHHTSCCCSCCS
T ss_pred             CccCCCCCCcCccCCHHHHHHHHHHH---------hCCCCCeECCCCCCcCccCCHHHHHHHHH-HhCCCCCeeCCC
Confidence            477876  999999999999999743         56789999988889999999999999996 777888999875

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.04  E-value=1.8e-11  Score=95.52  Aligned_cols=79  Identities=19%  Similarity=0.317  Sum_probs=64.3

Q ss_pred             CcceEecCCCCCccc------CChhHHHhhHhCcC---cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceec
Q 025436           64 GRRVCCPIVGCNARM------RSLEEFEDHYNARH---TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYEC  134 (253)
Q Consensus        64 ~k~f~C~~~gC~k~F------~s~~~L~~H~~~~H---~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C  134 (253)
                      .+.+.|.+  |.+.|      .....|..|+. ++   .|.|.+|++.|.+...|..|++.          |  ++||.|
T Consensus        39 ~~~~~c~~--~~~~~~~~~~~~~~~~l~~h~~-h~~~~~~~C~~C~k~f~~~~~l~~H~~~----------H--~~~~~C  103 (129)
T 2wbt_A           39 QKRLIRAI--VKTLIHNPQLLDESSYLYRLLA-SKAISQFVCPLCLMPFSSSVSLKQHIRY----------T--EHTKVC  103 (129)
T ss_dssp             HHHHHHHH--HHHHHHCGGGTTTHHHHHHHHH-HHHHCSEECTTTCCEESSHHHHHHHHHH----------T--CCCCBC
T ss_pred             hCcccchh--hhcccCCCcccCCHHHHHHHHH-hCCCCCeECCCCCcccCCHhHHHHHHHH----------C--CCCCCC
Confidence            45677876  66555      47777888874 22   49999999999999999999963          5  678999


Q ss_pred             CccccCCcCCChhHHHhHHhhhcCC
Q 025436          135 LVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       135 ~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      .+  |++.|.+...|+.|++.+|+.
T Consensus       104 ~~--C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A          104 PV--CKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             TT--TCCBCSSHHHHHHHHHHTTCC
T ss_pred             CC--CCcccCCHHHHHHHHHHHCCc
Confidence            77  999999999999999877754

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.03  E-value=1.1e-10  Score=83.50  Aligned_cols=57  Identities=23%  Similarity=0.428  Sum_probs=51.1

Q ss_pred             cccCCCcceEecCCCCCcccCChhHHHhhHhCcC-----cccCCCCCccCCCchhhhhhhhhhc
Q 025436           59 MVTEDGRRVCCPIVGCNARMRSLEEFEDHYNARH-----TASCSVCCRVYPTSRLLSIHVSEAH  117 (253)
Q Consensus        59 ~~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H-----~~~Cs~C~ksF~s~~~L~~Hi~e~H  117 (253)
                      ..|+++++|.|.+  |++.|.+...|..|++..|     .|.|.+|++.|.+...|..|++.+|
T Consensus         8 ~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H   69 (77)
T 2ct1_A            8 RTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH   69 (77)
T ss_dssp             CCCSCCCSEECTT--TCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             cccCCCCCeECCC--cCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhC
Confidence            3688999999998  9999999999999986434     3999999999999999999998755

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=98.98  E-value=1.5e-10  Score=77.74  Aligned_cols=53  Identities=19%  Similarity=0.317  Sum_probs=44.6

Q ss_pred             CCcceEecCCCCCcccCChhHHHhhHhCcC---cccCCCCCccCCCchhhhhhhhhhc
Q 025436           63 DGRRVCCPIVGCNARMRSLEEFEDHYNARH---TASCSVCCRVYPTSRLLSIHVSEAH  117 (253)
Q Consensus        63 ~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H---~~~Cs~C~ksF~s~~~L~~Hi~e~H  117 (253)
                      |+++|.|.+  |++.|.+...|..|+++++   .|.|.+|++.|.+...|..|+..+|
T Consensus         1 g~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            1 GSSSRECSY--CGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CBCTT--TCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCCccCCC--CcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            468999998  9999999999999998632   4999999999999999999998755

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=2.5e-10  Score=85.98  Aligned_cols=55  Identities=20%  Similarity=0.477  Sum_probs=49.9

Q ss_pred             ccCCCcceEecCCCCCcccC-ChhHHHhhHhCcCc----ccCCCCCccCCCchhhhhhhhhh
Q 025436           60 VTEDGRRVCCPIVGCNARMR-SLEEFEDHYNARHT----ASCSVCCRVYPTSRLLSIHVSEA  116 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~-s~~~L~~H~~~~H~----~~Cs~C~ksF~s~~~L~~Hi~e~  116 (253)
                      .|+++++|.|.+  |++.|. +...|..|+++++.    |.|.+|++.|.+...|..|++.+
T Consensus        18 ~h~~~~~~~C~~--C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h   77 (98)
T 2gqj_A           18 AIHERGEAVCPT--CNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAE   77 (98)
T ss_dssp             TTTTTSCCCCTT--TCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHH
T ss_pred             HhccCCCcCCCC--CCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHH
Confidence            678899999988  999999 99999999986443    99999999999999999999754

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.95  E-value=5e-10  Score=82.42  Aligned_cols=61  Identities=26%  Similarity=0.216  Sum_probs=47.6

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCc--------eecCccccCCcCCChhHHHhHHhhhcCCCCcccc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPM--------YECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEF  165 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~--------y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f  165 (253)
                      +.|..|++.|.+...|..|++.+         |.++++        |.|.+  |++.|.+...|+.|++ +|...++|.|
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~---------H~~~~~~~~~~c~~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C   93 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTME---------HVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIR-VHTGEKSGPS   93 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHT---------TTCCTTCSCCCCCCTTCSS--TTCCCSSHHHHHHHHH-HHHTCCCCSS
T ss_pred             CcccccccccCCHHHHHHHHHHh---------ccCCCCCCccceeccCCCC--CCcccCCHHHHHHHHH-hcCCCCCCCC
Confidence            57888888888888888888643         345555        88866  8888888888888885 6777888877


Q ss_pred             c
Q 025436          166 F  166 (253)
Q Consensus       166 ~  166 (253)
                      +
T Consensus        94 ~   94 (95)
T 2ej4_A           94 S   94 (95)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.94  E-value=5e-10  Score=84.27  Aligned_cols=56  Identities=23%  Similarity=0.479  Sum_probs=50.0

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhCcC---cccCCCCCccCCCchhhhhhhhhhc
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNARH---TASCSVCCRVYPTSRLLSIHVSEAH  117 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H---~~~Cs~C~ksF~s~~~L~~Hi~e~H  117 (253)
                      .+.+.++|.|++  |++.|.+...|..|+++++   .|.|.+|++.|.+...|..|+...|
T Consensus        22 ~~~~~~~h~C~~--Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H   80 (85)
T 2lv2_A           22 LSASAECHLCPV--CGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCH   80 (85)
T ss_dssp             SCCCCTTEECTT--SCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTC
T ss_pred             CCCCCCCEECCC--CCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccC
Confidence            456778999988  9999999999999998744   3999999999999999999997655

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.94  E-value=8.8e-10  Score=81.04  Aligned_cols=62  Identities=23%  Similarity=0.423  Sum_probs=56.0

Q ss_pred             cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436           93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.|.+|++.|.+...|..|+..          |.++++|.|.+  |++.|.+...|..|++ .|...++|.|..
T Consensus         8 ~~~C~~C~~~f~~~~~l~~H~~~----------h~~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~   69 (96)
T 2dmd_A            8 PHKCEVCGKCFSRKDKLKTHMRC----------HTGVKPYKCKT--CDYAAADSSSLNKHLR-IHSDERPFKCQI   69 (96)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGG----------CCCCCSEECSS--SCCEESSHHHHHHHHH-HSCCCCCEECSS
T ss_pred             CeECCCCCCccCCHHHHHHHHHh----------cCCCCCEeCCC--CCCccCCHHHHHHHHH-HhCCCCCccCCC
Confidence            48999999999999999999974          45788999977  9999999999999996 687888999986

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.93  E-value=4.1e-10  Score=79.35  Aligned_cols=31  Identities=26%  Similarity=0.581  Sum_probs=20.6

Q ss_pred             cccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           59 MVTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        59 ~~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      ..|+++++|.|++..|++.|.+...|..|++
T Consensus        12 ~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~   42 (73)
T 1f2i_G           12 YVVPKMRPYACPVESCDRRFSRSDELTRHIR   42 (73)
T ss_dssp             CCCCCCCCEECSSTTBCCEESSHHHHHHHHH
T ss_pred             ccCCCCCccCCcCCCCCCccCCHHHHHHHHH
Confidence            3566677777765457777777777777764

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=98.93  E-value=4.9e-10  Score=79.76  Aligned_cols=61  Identities=21%  Similarity=0.406  Sum_probs=55.0

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      |.|..|++.|.+...|..|+..          |.++++|.|.+  |++.|.+...|..|++ .|...++|.|..
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~----------h~~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~   62 (82)
T 2kmk_A            2 FDCKICGKSFKRSSTLSTHLLI----------HSDTRPYPCQY--CGKRFHQKSDMKKHTF-IHTGEKPHKCQV   62 (82)
T ss_dssp             EECSSSCCEESSHHHHHHHHHH----------HHTCCCEECSS--SCCEESSHHHHHHHHH-HHHTCCCEECTT
T ss_pred             ccCCCCcccccCchhHHHHHHH----------cCCCCCeeCCc--CChhhCCHHHHHHHHH-HhcCCCCCcCCC
Confidence            7899999999999999999974          56789999977  9999999999999986 677788999986

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=98.93  E-value=1.2e-09  Score=81.95  Aligned_cols=62  Identities=23%  Similarity=0.374  Sum_probs=56.1

Q ss_pred             cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436           93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.|..|++.|.+...|..|+..          |.++++|.|.+  |++.|.+...|..|++ .|...++|.|..
T Consensus        17 ~~~C~~C~~~f~~~~~l~~H~~~----------h~~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~   78 (106)
T 2ee8_A           17 EFICKFCGRHFTKSYNLLIHERT----------HTDERPYTCDI--CHKAFRRQDHLRDHRY-IHSKEKPFKCQE   78 (106)
T ss_dssp             CCBCSSSCCBCSSHHHHHHHHHH----------HCCSCCCBCSS--SCCBCSCHHHHHHHGG-GSCCCCTTSCSS
T ss_pred             CeECCCCCCccCCHHHHHHHHHH----------cCCCCCcCCCC--ccchhCCHHHHHHHHH-HhCCCCCeECCC
Confidence            59999999999999999999974          56789999977  9999999999999985 788888999986

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.93  E-value=6.9e-10  Score=81.63  Aligned_cols=59  Identities=15%  Similarity=0.206  Sum_probs=51.3

Q ss_pred             cceEecCCCCCcccCChhHHHhhHhCcCc------------ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCce
Q 025436           65 RRVCCPIVGCNARMRSLEEFEDHYNARHT------------ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMY  132 (253)
Q Consensus        65 k~f~C~~~gC~k~F~s~~~L~~H~~~~H~------------~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y  132 (253)
                      ..|.|..  |++.|.+...|..|+++.|.            |.|.+|++.|.+...|..|++          .|++++||
T Consensus        24 ~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~----------~H~~~k~~   91 (95)
T 2ej4_A           24 LSRPKKS--CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR----------VHTGEKSG   91 (95)
T ss_dssp             SSSSCCC--CCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHH----------HHHTCCCC
T ss_pred             CCCcccc--cccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHH----------hcCCCCCC
Confidence            3467877  99999999999999976452            899999999999999999997          46789999


Q ss_pred             ecC
Q 025436          133 ECL  135 (253)
Q Consensus       133 ~C~  135 (253)
                      .|.
T Consensus        92 ~C~   94 (95)
T 2ej4_A           92 PSS   94 (95)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            994

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=5.6e-11  Score=82.91  Aligned_cols=62  Identities=15%  Similarity=0.172  Sum_probs=54.7

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhCcCcccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCcccc
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGC  139 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC  139 (253)
                      .|.++++|.|.+  |++.|.+...|..    ...|.|..|++.|.+...|..|+..          |.++++|.|.+  |
T Consensus        12 ~h~~~~~~~C~~--C~k~f~~~~~l~~----~~~~~C~~C~~~f~~~~~l~~H~~~----------H~~~~~~~C~~--C   73 (73)
T 2ctu_A           12 IHLGDRSQKCSK--CGIIFIRRSTLSR----RKTPMCEKCRKDSCQEAALNKDEGN----------ESGKKTSGPSS--G   73 (73)
T ss_dssp             CCCCCSEEECSS--SCCEEECCCCCCC----SSSCCCHHHHHTCSCCCSSCCCSSC----------CCCCCCSSCCC--C
T ss_pred             HhCCCCCeeCCc--ccchhCCHHHhCc----CCCCCCCCCChhhcCHHHHHHHHHh----------hcCCCCCCCCC--C
Confidence            578899999988  9999999999887    3569999999999999999999973          56889999976  7

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=98.92  E-value=6.2e-10  Score=79.56  Aligned_cols=55  Identities=22%  Similarity=0.379  Sum_probs=49.3

Q ss_pred             ccC--CCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHhhhcC
Q 025436           94 ASC--SVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus        94 ~~C--s~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      |.|  ..|++.|.+...|..|++.          |.++++|.|.+++|++.|.+...|..|++.++.
T Consensus         2 ~~C~~~~C~~~f~~~~~l~~H~~~----------h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   58 (85)
T 2j7j_A            2 YVCHFENCGKAFKKHNQLKVHQFS----------HTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG   58 (85)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHH----------HHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred             ccCCCCCCCcccCCHHHHHHHHHH----------hCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence            789  8999999999999999963          567899999888899999999999999975554

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.91  E-value=1.1e-09  Score=80.26  Aligned_cols=63  Identities=22%  Similarity=0.460  Sum_probs=54.8

Q ss_pred             cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHhhhcCC-CCcccccc
Q 025436           93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKF-PTSFEFFK  167 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~-p~~f~f~~  167 (253)
                      .|.|.+|++.|.+...|..|+..          |.++++|.|.+  |++.|.+...|..|++.++.. .++|.|..
T Consensus         7 ~~~C~~C~~~f~~~~~l~~H~~~----------h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~   70 (95)
T 2yt9_A            7 GVACEICGKIFRDVYHLNRHKLS----------HSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKPYICQS   70 (95)
T ss_dssp             CEECSSSCCEESSSHHHHHHHHH----------SCSSCSEECSS--SCCEESCHHHHHHHHHHHCCCCCSSBCCSS
T ss_pred             CeECCCCCCccCChHHHHHHHHh----------cCCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCCCCceECCC
Confidence            48999999999999999999974          56789999977  999999999999999755543 38899986

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=98.89  E-value=9e-10  Score=79.71  Aligned_cols=64  Identities=31%  Similarity=0.567  Sum_probs=57.2

Q ss_pred             cccCCC--CCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436           93 TASCSV--CCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus        93 ~~~Cs~--C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.|..  |++.|.+...|..|+..          |.++++|.|.+++|++.|.+...|..|++ .|...++|.|..
T Consensus         5 ~~~C~~~~C~~~f~~~~~l~~H~~~----------h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~   70 (89)
T 2wbs_A            5 THTCDYAGCGKTYTKSSHLKAHLRT----------HTGEKPYHCDWDGCGWKFARSDELTRHYR-KHTGHRPFQCQK   70 (89)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHTT----------SCSSCCEECCSTTTCCEESSHHHHHHHHH-HHHCCCCEECSS
T ss_pred             CeeCCCCCCCCcCCCHHHHHHHHHh----------cCCCCCcCCCCCCCCCccCCHHHHHHHHH-HcCCCCCccCCC
Confidence            589999  99999999999999974          56789999986679999999999999985 777888999986

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.89  E-value=8.7e-10  Score=77.59  Aligned_cols=59  Identities=19%  Similarity=0.366  Sum_probs=41.6

Q ss_pred             cCCCcceEecCCCCCcccCChhHHHhhHhCcCcccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccC
Q 025436           61 TEDGRRVCCPIVGCNARMRSLEEFEDHYNARHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCG  140 (253)
Q Consensus        61 h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~  140 (253)
                      ....++|.|.+++|++.|.....|..|++                                   .|.++++|.|.+++|+
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~-----------------------------------~H~~~~~~~C~~~~C~   56 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTR-----------------------------------THTGEKPFSCSWKGCE   56 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHH-----------------------------------HHSSSCSEECCCTTCC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHH-----------------------------------hcCCCCCccCCCCCCC
Confidence            34456666666566666665555555553                                   2567888999777799


Q ss_pred             CcCCChhHHHhHHh
Q 025436          141 LKFKNYKSRQQHLV  154 (253)
Q Consensus       141 kkF~t~~~rk~Hl~  154 (253)
                      +.|.+...|+.|++
T Consensus        57 k~f~~~~~l~~H~~   70 (72)
T 2epa_A           57 RRFARSDELSRHRR   70 (72)
T ss_dssp             CEESSHHHHHHHTT
T ss_pred             cccCCHHHHHhHhh
Confidence            99999999999975

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.88  E-value=9.3e-10  Score=77.48  Aligned_cols=63  Identities=21%  Similarity=0.414  Sum_probs=50.5

Q ss_pred             hHHHhhHhCcC----cccCC--CCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHhh
Q 025436           82 EEFEDHYNARH----TASCS--VCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVD  155 (253)
Q Consensus        82 ~~L~~H~~~~H----~~~Cs--~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~  155 (253)
                      ..|..|++..|    .|.|.  .|++.|.+...|..|++.          |.++++|.|.+  |++.|.+...|..|++ 
T Consensus         4 ~~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~----------h~~~~~~~C~~--C~~~f~~~~~l~~H~~-   70 (73)
T 1f2i_G            4 HPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRI----------HTGQKPFQCRI--CMRNFSRSDHLTTHIR-   70 (73)
T ss_dssp             ----CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHH----------HHCCCCEECTT--TCCEESCHHHHHHHHT-
T ss_pred             CCccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHh----------hCCCCCeECCC--CCchhCCHHHHHHHHH-
Confidence            34556665545    39997  599999999999999963          56889999977  9999999999999985 


Q ss_pred             hc
Q 025436          156 KH  157 (253)
Q Consensus       156 ~H  157 (253)
                      .|
T Consensus        71 ~H   72 (73)
T 1f2i_G           71 TH   72 (73)
T ss_dssp             TC
T ss_pred             hc
Confidence            55

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=98.87  E-value=5.9e-10  Score=81.55  Aligned_cols=61  Identities=26%  Similarity=0.477  Sum_probs=53.3

Q ss_pred             cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436           93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.|.+|++.|.+...|..|+..          |.++++|.|.+  |++.|.+...|..|++.+|.  .+|.|+.
T Consensus         3 ~~~C~~C~k~f~~~~~L~~H~~~----------H~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~--~~~~c~~   63 (88)
T 1llm_C            3 PFQCRICMRNFSRSDHLTTHIRT----------HTGEKPFACDI--CGRKFARSDERKRHRDIQHI--LPILEDK   63 (88)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHH----------HHCCCCEECTT--TCCEESSHHHHHHHHHHHTH--HHHHHHH
T ss_pred             CCcCCCCCCccCCHHHHHHHHHH----------cCCCCCccCCC--CCCccCCHHHHHHHHHHhCC--CcchHHH
Confidence            58999999999999999999973          56889999977  99999999999999987773  6676654

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=98.86  E-value=1.9e-09  Score=79.62  Aligned_cols=64  Identities=28%  Similarity=0.515  Sum_probs=57.2

Q ss_pred             cccCCC--CCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436           93 TASCSV--CCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus        93 ~~~Cs~--C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.|..  |++.|.+...|..|++.          |.++++|.|.+++|++.|.+...|..|++ .|...++|.|..
T Consensus        15 ~~~C~~~~C~~~f~~~~~l~~H~~~----------h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~   80 (100)
T 2ebt_A           15 IHYCDYPGCTKVYTKSSHLKAHLRT----------HTGEKPYKCTWEGCDWRFARSDELTRHYR-KHTGAKPFQCGV   80 (100)
T ss_dssp             CEECCSSSCCCEESCHHHHHHHHHH----------HSCCCCEECCSSSCCCEESSHHHHHHHHH-HHTSCCSCBCSS
T ss_pred             ceEcCCCCCCCcccCHHHHHHHHHH----------hCCCCCeeCCCCCCCCccCCHHHHHHHHH-HhCCCCCeECCC
Confidence            489996  99999999999999974          56789999987789999999999999995 777889999986

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.85  E-value=1.3e-09  Score=73.86  Aligned_cols=51  Identities=25%  Similarity=0.645  Sum_probs=45.4

Q ss_pred             cceEecCCCCCcccCChhHHHhhHhCcC---cccCCCCCccCCCchhhhhhhhhhc
Q 025436           65 RRVCCPIVGCNARMRSLEEFEDHYNARH---TASCSVCCRVYPTSRLLSIHVSEAH  117 (253)
Q Consensus        65 k~f~C~~~gC~k~F~s~~~L~~H~~~~H---~~~Cs~C~ksF~s~~~L~~Hi~e~H  117 (253)
                      +||.|.+  |++.|.+...|..|+++++   .|.|..|++.|.+...|..|+...|
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H   54 (60)
T 2adr_A            1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH   54 (60)
T ss_dssp             CCBCCTT--TCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTS
T ss_pred             CcCcCCC--CccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHc
Confidence            4799988  9999999999999998633   3999999999999999999986555

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.85  E-value=1e-09  Score=83.38  Aligned_cols=53  Identities=23%  Similarity=0.450  Sum_probs=45.8

Q ss_pred             cCCCcceEecCCCCCccc-CChhHHHhhHhCc--CcccCCCCCccCCCchhhhhhhhh
Q 025436           61 TEDGRRVCCPIVGCNARM-RSLEEFEDHYNAR--HTASCSVCCRVYPTSRLLSIHVSE  115 (253)
Q Consensus        61 h~~~k~f~C~~~gC~k~F-~s~~~L~~H~~~~--H~~~Cs~C~ksF~s~~~L~~Hi~e  115 (253)
                      |.++++|.|+.  |++.| .+..+|..|++++  ..|.|.+|++.|.+...|..|+..
T Consensus        29 ~~~~~~~~C~~--C~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F~~~~~L~~H~~~   84 (96)
T 2ctd_A           29 IVDKGSVSCPT--CQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVMA   84 (96)
T ss_dssp             HHHTSCEECTT--TCSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSSHHHHHHHHHH
T ss_pred             hcCCCCcCCCC--CCCCcccCHHHHHHHHHHHCCCCeECCCCCCeeCCHHHHHHHhHH
Confidence            44568999988  99999 9999999999763  139999999999999999999433

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=3.4e-10  Score=86.28  Aligned_cols=77  Identities=13%  Similarity=-0.025  Sum_probs=62.2

Q ss_pred             ChhHHHhhHhCcC---cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCc-eecCccccCCcC--CChhHHHhHH
Q 025436           80 SLEEFEDHYNARH---TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPM-YECLVEGCGLKF--KNYKSRQQHL  153 (253)
Q Consensus        80 s~~~L~~H~~~~H---~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~-y~C~vegC~kkF--~t~~~rk~Hl  153 (253)
                      +...|..|++++.   .|.|.+|++.|.+...|..|+.. |       .|.++++ +.|.+  |++.|  .+...|..|+
T Consensus         3 s~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-~-------~h~~~~~~~~C~~--C~~~f~f~~~~~l~~H~   72 (115)
T 2dmi_A            3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNE-T-------GHYRDDNHETDNN--NPKRWSKPRKRSLLEME   72 (115)
T ss_dssp             CCCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHH-T-------CCCBCSCCCCCCC--CCSCCSSCCCCCCCCCC
T ss_pred             cchhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHH-h-------CccccCCCccCCC--CCcccccccHHHHHHHh
Confidence            4556888987533   39999999999999999999975 2       1445554 55977  99999  9999999998


Q ss_pred             hhhcCCCCcccccc
Q 025436          154 VDKHKFPTSFEFFK  167 (253)
Q Consensus       154 ~~~H~~p~~f~f~~  167 (253)
                      + +|...++|.|+.
T Consensus        73 ~-~H~~~~~~~C~~   85 (115)
T 2dmi_A           73 G-KEDAQKVLKCMY   85 (115)
T ss_dssp             C-SCCCCSSCBCSS
T ss_pred             h-ccCCCcceECCC
Confidence            5 788899999987

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.82  E-value=2.4e-09  Score=80.91  Aligned_cols=61  Identities=26%  Similarity=0.384  Sum_probs=55.0

Q ss_pred             cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436           93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.| .|++.|.+...|..|+..          |.++++|.|.+  |++.|.+...|..|++ .|...++|.|..
T Consensus        10 ~~~C-~C~~~f~~~~~l~~H~~~----------h~~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~   70 (110)
T 2csh_A           10 LYPC-QCGKSFTHKSQRDRHMSM----------HLGLRPYGCGV--CGKKFKMKHHLVGHMK-IHTGIKPYECNI   70 (110)
T ss_dssp             CEEC-TTSCEESSHHHHHHHHHH----------HSCCCSEECTT--TSCEESSSHHHHHHHT-TTCCCCCEECSS
T ss_pred             CEec-cCCCccCCHHHHHHHHHH----------cCCCcCccCCC--CCcccCCHHHHHHHHH-HcCCCCCeeCCC
Confidence            4999 999999999999999974          56788999977  9999999999999985 777888999986

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.80  E-value=1.4e-09  Score=84.62  Aligned_cols=56  Identities=23%  Similarity=0.494  Sum_probs=50.8

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhC-cCcccCCCCCccCCCchhhhhhhhhhc
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNA-RHTASCSVCCRVYPTSRLLSIHVSEAH  117 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~-~H~~~Cs~C~ksF~s~~~L~~Hi~e~H  117 (253)
                      .|++++||.|.+  |++.|.+...|..|+++ .+.|.|.+|++.|.+...|..|++.+|
T Consensus        68 ~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~C~~C~k~f~~~~~l~~H~~~h~  124 (129)
T 2wbt_A           68 ASKAISQFVCPL--CLMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTSTDSALDHVCKKH  124 (129)
T ss_dssp             HHHHHCSEECTT--TCCEESSHHHHHHHHHHTCCCCBCTTTCCBCSSHHHHHHHHHHTT
T ss_pred             HhCCCCCeECCC--CCcccCCHhHHHHHHHHCCCCCCCCCCCcccCCHHHHHHHHHHHC
Confidence            578899999998  99999999999999986 356999999999999999999998654

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=98.80  E-value=2.1e-09  Score=71.97  Aligned_cols=49  Identities=18%  Similarity=0.411  Sum_probs=44.1

Q ss_pred             ceEecCCCCCcccCChhHHHhhHhCcC---cccCCCCCccCCCchhhhhhhhhh
Q 025436           66 RVCCPIVGCNARMRSLEEFEDHYNARH---TASCSVCCRVYPTSRLLSIHVSEA  116 (253)
Q Consensus        66 ~f~C~~~gC~k~F~s~~~L~~H~~~~H---~~~Cs~C~ksF~s~~~L~~Hi~e~  116 (253)
                      ||.|.+  |++.|.+...|..|+++++   .|.|+.|++.|.+...|..|++.+
T Consensus         1 p~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h   52 (57)
T 1bbo_A            1 KYICEE--CGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK   52 (57)
T ss_dssp             CCBCTT--TCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CCcCCC--CcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHh
Confidence            689988  9999999999999998643   399999999999999999999754

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=98.77  E-value=3.6e-09  Score=76.65  Aligned_cols=62  Identities=21%  Similarity=0.391  Sum_probs=55.1

Q ss_pred             cccCC--CCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436           93 TASCS--VCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus        93 ~~~Cs--~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.|.  .|++.|.+...|..|+..          |.++++|.|.+  |++.|.+...|+.|++ .|...++|.|..
T Consensus         4 ~~~C~~~~C~~~f~~~~~l~~H~~~----------h~~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~   67 (90)
T 1a1h_A            4 PYACPVESCDRRFSQSGSLTRHIRI----------HTGQKPFQCRI--CMRNFSRSDHLTTHIR-THTGEKPFACDI   67 (90)
T ss_dssp             CEECCSSSCCCEESSHHHHHHHHHH----------HHCCCCEECTT--TCCEESCHHHHHHHHH-HHHCCCCEECTT
T ss_pred             ceECCCCCCCCccCCHHHHHHHHHH----------hCCCCCccCCC--CCcccCCHHHHHHHHH-HcCCCCCccCCC
Confidence            48898  599999999999999974          56789999977  9999999999999986 677788899986

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.71  E-value=5.5e-09  Score=78.85  Aligned_cols=62  Identities=23%  Similarity=0.331  Sum_probs=54.2

Q ss_pred             cceEecCCCCCcccCChhHHHhhHhCcC----cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCcccc
Q 025436           65 RRVCCPIVGCNARMRSLEEFEDHYNARH----TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGC  139 (253)
Q Consensus        65 k~f~C~~~gC~k~F~s~~~L~~H~~~~H----~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC  139 (253)
                      ++|.|.+  |++.|.+...|..|+.  |    .|.|.+|++.|.+...|..|++..         |.++++|.|.-+.+
T Consensus        41 ~~~~C~~--C~~~f~~~~~l~~H~~--H~~~~~~~C~~C~~~f~~~~~L~~H~~~~---------H~~~~~~~~~~p~s  106 (107)
T 1wjp_A           41 NAAVCPY--CSLRFFSPELKQEHES--KCEYKKLTCLECMRTFKSSFSIWRHQVEV---------HNQNNMAPTSGPSS  106 (107)
T ss_dssp             HSBCCTT--TCCCBSSHHHHHHHHH--HCSTGGGEEGGGTEECSSHHHHHHHHHHT---------SCCCCCCCCCCSCC
T ss_pred             CCccCCC--CCCccCCHHHHHHHHH--cCCCCCccCccccchhCCHHHHHHHHHHH---------cCCCCCCCCCCCCC
Confidence            6899988  9999999999999994  5    399999999999999999999753         57899999966544

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.69  E-value=8.8e-09  Score=72.32  Aligned_cols=31  Identities=19%  Similarity=0.478  Sum_probs=27.9

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhC
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      .|+++++|.|.+++|++.|.....|..|+++
T Consensus        41 ~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~   71 (72)
T 2epa_A           41 THTGEKPFSCSWKGCERRFARSDELSRHRRT   71 (72)
T ss_dssp             HHSSSCSEECCCTTCCCEESSHHHHHHHTTT
T ss_pred             hcCCCCCccCCCCCCCcccCCHHHHHhHhhc
Confidence            5889999999877899999999999999864

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=3.8e-10  Score=78.64  Aligned_cols=68  Identities=12%  Similarity=0.023  Sum_probs=56.2

Q ss_pred             ChhHHHhhHhCcC---cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHhhh
Q 025436           80 SLEEFEDHYNARH---TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDK  156 (253)
Q Consensus        80 s~~~L~~H~~~~H---~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~  156 (253)
                      +...|..|++++.   .|.|.+|++.|.+...|..                 +++|.|.+  |++.|.+...|..|++ .
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-----------------~~~~~C~~--C~~~f~~~~~l~~H~~-~   61 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-----------------RKTPMCEK--CRKDSCQEAALNKDEG-N   61 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-----------------SSSCCCHH--HHHTCSCCCSSCCCSS-C
T ss_pred             cchhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-----------------CCCCCCCC--CChhhcCHHHHHHHHH-h
Confidence            3456788887533   3999999999999988876                 46899976  9999999999999985 7


Q ss_pred             cCCCCcccccc
Q 025436          157 HKFPTSFEFFK  167 (253)
Q Consensus       157 H~~p~~f~f~~  167 (253)
                      |...++|.|+.
T Consensus        62 H~~~~~~~C~~   72 (73)
T 2ctu_A           62 ESGKKTSGPSS   72 (73)
T ss_dssp             CCCCCCSSCCC
T ss_pred             hcCCCCCCCCC
Confidence            88889998863

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=1.1e-08  Score=71.21  Aligned_cols=25  Identities=16%  Similarity=0.432  Sum_probs=15.0

Q ss_pred             CCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           62 EDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        62 ~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      -++++|.|..  |+++|. ...|..|++
T Consensus         6 C~~~~~~C~~--C~k~f~-~~~L~~H~~   30 (66)
T 2eod_A            6 SGKRTQPCTY--CTKEFV-FDTIQSHQY   30 (66)
T ss_dssp             CCCCEEECSS--SCCEEE-HHHHHHHHH
T ss_pred             CCCCCeeccc--cCCccC-HHHHHHHHH
Confidence            4556666655  666666 666666654

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.62  E-value=2.9e-08  Score=66.64  Aligned_cols=28  Identities=14%  Similarity=0.388  Sum_probs=19.2

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |++.|.....|..|++
T Consensus         6 ~~~~~k~~~C~~--C~k~f~~~~~L~~H~~   33 (54)
T 2eps_A            6 SGSVGKPYICQS--CGKGFSRPDHLNGHIK   33 (54)
T ss_dssp             CCCSSCCEECSS--SCCEESSHHHHHHHHH
T ss_pred             CCCCCCCeECCC--CCcccCCHHHHHHHHH
Confidence            456667777766  7777777777777764

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=2e-08  Score=69.93  Aligned_cols=52  Identities=19%  Similarity=0.307  Sum_probs=46.8

Q ss_pred             cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecC-ccccCCcCCChhHHHhHHhhhcC
Q 025436           93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECL-VEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~-vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      .|.|..|++.|. ...|..|++          . .+++||.|. .  |++.|.....|..|++.+-.
T Consensus        10 ~~~C~~C~k~f~-~~~L~~H~~----------~-~~~~p~~C~~~--C~k~f~~~~~L~~H~~~hc~   62 (66)
T 2eod_A           10 TQPCTYCTKEFV-FDTIQSHQY----------Q-CPRLPVACPNQ--CGVGTVAREDLPGHLKDSCN   62 (66)
T ss_dssp             EEECSSSCCEEE-HHHHHHHHH----------H-CSSSEEECTTC--CSCCEEETTTHHHHHHTTSS
T ss_pred             CeeccccCCccC-HHHHHHHHH----------H-cCCcCccCCcc--cCcccccHHHHHHHHHhhcc
Confidence            489999999999 999999986          3 578999996 6  99999999999999998753

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.51  E-value=5.8e-08  Score=65.02  Aligned_cols=51  Identities=12%  Similarity=0.107  Sum_probs=44.3

Q ss_pred             CccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcc
Q 025436          100 CRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSF  163 (253)
Q Consensus       100 ~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f  163 (253)
                      ++.|.....|..|++          .|+++++|.|.+  |++.|.....|..|++ +|...++|
T Consensus         3 ~k~~~~~~~l~~h~~----------~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRS----------RSQSEQPATCPI--CYAVIRQSRNLRRHLE-LRHFAKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHH----------HHTSSCCEECTT--TCCEESSHHHHHHHHH-HHTTTSCC
T ss_pred             ccccCCCcchhhHHH----------hcCCCCCccCCC--CCcccCCHHHHHHHHH-HhccCCCC
Confidence            478889999999986          467899999977  9999999999999986 77777776

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.50  E-value=4.5e-08  Score=65.70  Aligned_cols=42  Identities=17%  Similarity=0.234  Sum_probs=36.5

Q ss_pred             cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCC
Q 025436           93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKN  145 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t  145 (253)
                      .|.|.+|++.|.+...|..|++.         .|.++++|.|.+  |++.|++
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~---------~H~~~k~~~C~~--C~k~F~~   53 (54)
T 2eps_A           12 PYICQSCGKGFSRPDHLNGHIKQ---------VHTSERPHKCQV--WVSGPSS   53 (54)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHH---------TSCCCCCCCSSS--SCCSSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHH---------hcCCCCCccCCC--CCCCCCC
Confidence            49999999999999999999863         256889999977  9999986

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.50  E-value=7.1e-08  Score=71.24  Aligned_cols=43  Identities=21%  Similarity=0.217  Sum_probs=39.3

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFKK  168 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~~  168 (253)
                      .+|++||.|.+++|++.|....+|+.|++++|+.+++|.|.-+
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~~   64 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAEV   64 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCSC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccccc
Confidence            6789999999889999999999999999779999999998653

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.35  E-value=2.1e-07  Score=59.71  Aligned_cols=40  Identities=20%  Similarity=0.197  Sum_probs=32.2

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|+++++|.|.+  |++.|.....|+.|++ .|...++|.|++
T Consensus         6 ~H~~~k~~~C~~--C~k~F~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2enf_A            6 SGTGEKPYKCNE--CGKVFTQNSHLVRHRG-IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCBCSS--SCCBCSSHHHHHHHHT-TTTTSSCCCCSC
T ss_pred             CCCCCcCeECCC--CCcccCCHHHHHHHHH-hhCCCCCCCCCC
Confidence            366788899966  9999999999999974 777788888864

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.34  E-value=2.5e-07  Score=59.35  Aligned_cols=40  Identities=20%  Similarity=0.200  Sum_probs=31.6

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|+++++|.|.+  |++.|.+...|+.|++ .|...++|.|++
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2ytj_A            6 SGTGEKPYICAE--CGKAFTIRSNLIKHQK-IHTKQKPSGPSS   45 (46)
T ss_dssp             TTSSCCSEECSS--SCCEESSHHHHHHHHH-HTSCCCCSSCSC
T ss_pred             CCCCCcCeECCC--CChhhCCHHHHHHHHH-HcCCCCCCCCCC
Confidence            367788888866  8888888888888875 677788888764

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.34  E-value=2.3e-07  Score=59.56  Aligned_cols=40  Identities=20%  Similarity=0.229  Sum_probs=31.5

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|+++++|.|.+  |++.|.....|..|++ +|...++|.|++
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2eq2_A            6 SGTGGKPYQCNE--CGKAFSQTSKLARHQR-VHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSCSSSCCS--SCCCCSSHHHHHHHGG-GGCCCCCCCCCC
T ss_pred             ccCCCCCeECCC--CCcccCCHHHHHHHHH-HcCCCCCCCCCC
Confidence            366788888866  8888888888888874 677788888764

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.34  E-value=3.2e-07  Score=57.45  Aligned_cols=39  Identities=21%  Similarity=0.235  Sum_probs=32.9

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      .|.++++|.|.+  |++.|.+...|+.|++ .|...++|.|+
T Consensus         4 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C~   42 (42)
T 2yte_A            4 GSSGEKPYSCAE--CKETFSDNNRLVQHQK-MHTVKSGPSSG   42 (42)
T ss_dssp             SSCSCCSCBCTT--TCCBCSSHHHHHHHHH-HTSCCSSCCCC
T ss_pred             CcCCCCCeECCC--CCCccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            467889999977  9999999999999985 68888888874

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.33  E-value=2.5e-07  Score=59.53  Aligned_cols=40  Identities=18%  Similarity=0.247  Sum_probs=31.6

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.++++|.|.+  |++.|.+...|..|++ .|...++|.|++
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2yth_A            6 SGSGEKPFQCEE--CGKRFTQNSHLHSHQR-VHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSBCCSS--SCCCBSSHHHHHHHGG-GGTTCCCSSCCC
T ss_pred             CCCCCcCCCCCC--CCcccCCHHHHHHHHH-hcCCCCCCCCCC
Confidence            356788888866  8888888888888875 677778888764

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.33  E-value=2.2e-07  Score=59.59  Aligned_cols=40  Identities=20%  Similarity=0.231  Sum_probs=31.4

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|+++++|.|.+  |++.|.+...|+.|++ .|...++|.|++
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C~~   45 (46)
T 2ep3_A            6 SGTGEKPYRCAE--CGKAFTDRSNLFTHQK-IHTGEKPSGPSS   45 (46)
T ss_dssp             SSSCCCSEECSS--SCCEESSHHHHHHHHT-TTTTSCCCCTTC
T ss_pred             CCCCCCCeECCC--CCchhCCHHHHHHHHH-HcCCCCCCCCCC
Confidence            366788888866  8888888888888874 677778888764

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.33  E-value=2.2e-07  Score=59.60  Aligned_cols=40  Identities=20%  Similarity=0.208  Sum_probs=31.7

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|+++++|.|.+  |++.|.....|+.|++ +|...++|.|++
T Consensus         6 ~H~~~k~~~C~~--C~k~F~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2yti_A            6 SGTGEKPYKCNE--CGKVFTQNSHLARHRG-IHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCTTCCSS--SCCCCSSHHHHHHHHT-TTSCSCCSSTTC
T ss_pred             CCCCCcCeECCC--CCcccCChhHHHHHhH-hcCCCCCCCCCC
Confidence            366788888866  8888888888888874 777788888764

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.33  E-value=2.2e-07  Score=59.45  Aligned_cols=40  Identities=23%  Similarity=0.223  Sum_probs=33.1

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.++++|.|.+  |++.|.....|+.|++ .|...++|.|++
T Consensus         6 ~H~~~~~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2yrj_A            6 SGTGEKPYRCGE--CGKAFAQKANLTQHQR-IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCEECSS--SCCEESSHHHHHHHHT-TTSSCCSSCSCC
T ss_pred             CCCCCCCeECCC--CCCccCCHHHHHHHHH-HcCCCCCCCCCC
Confidence            367888999976  9999999999999975 777888888864

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.32  E-value=3.6e-07  Score=58.46  Aligned_cols=28  Identities=18%  Similarity=0.541  Sum_probs=18.9

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |++.|.....|..|++
T Consensus         4 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~   31 (45)
T 2epq_A            4 GSSGEKPYSCPV--CGLRFKRKDRMSYHVR   31 (45)
T ss_dssp             CCSSCCSSEETT--TTEECSCHHHHHHHHH
T ss_pred             CcCCCCCCcCCC--CCcccCCHHHHHHHHH
Confidence            466677777766  7777776666666664

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.32  E-value=3.1e-07  Score=58.79  Aligned_cols=40  Identities=23%  Similarity=0.228  Sum_probs=31.2

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.++++|.|.+  |++.|.+...|..|++ .|...++|.|++
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2ep1_A            6 SGTGEKPYECSD--CGKSFIKKSQLHVHQR-IHTGENPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCSS--SCCCCSSHHHHHHHHG-GGSSSCCCSSSC
T ss_pred             CCCCCCCcCCCC--CCchhCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            356788888866  8888888888888875 677778888764

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.32  E-value=2.2e-07  Score=59.45  Aligned_cols=40  Identities=23%  Similarity=0.272  Sum_probs=32.9

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.++++|.|.+  |++.|.+...|+.|++ .|...++|.|+.
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2eow_A            6 SGTGEKPYKCNE--CGKAFRARSSLAIHQA-THSGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCEECTT--SCCEESSHHHHHHHHH-HHCCCSCSCTTC
T ss_pred             CCCCCCCeeccc--cCChhcCHHHHHHHHH-HcCCCCCCCCCC
Confidence            367888999976  9999999999999985 677888888864

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.32  E-value=2.7e-07  Score=59.08  Aligned_cols=40  Identities=20%  Similarity=0.184  Sum_probs=32.7

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.++++|.|.+  |++.|.....|..|++ .|...++|.|++
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~p~~C~~   45 (46)
T 2yts_A            6 SGTGEKPYICNE--CGKSFIQKSHLNRHRR-IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCSEECSS--SCCEESSHHHHHHHGG-GTSSCCSSCCCC
T ss_pred             CCCCCcCEECCC--CChhhCChHHHHHHHH-hcCCCCCcCCCC
Confidence            367788899966  9999999999999974 788888888864

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.32  E-value=2.5e-07  Score=59.36  Aligned_cols=36  Identities=22%  Similarity=0.265  Sum_probs=16.4

Q ss_pred             cCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccc
Q 025436          127 RGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEF  165 (253)
Q Consensus       127 ~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f  165 (253)
                      +++++|.|.+  |++.|.+...|+.|++ .|...++|.|
T Consensus         8 ~~~k~~~C~~--C~k~F~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2ytn_A            8 TGKKPYKCNE--CGKVFTQNSHLARHRG-IHTGEKPSGP   43 (46)
T ss_dssp             SCCSSCBCTT--TCCBCSSHHHHHHHGG-GTSCCCCCSC
T ss_pred             CCCcCeECCC--CCCeeCCHHHHHHHhh-hcCCCCCCCC
Confidence            3444444433  4444444444444444 2334444444

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.32  E-value=2.5e-07  Score=59.37  Aligned_cols=40  Identities=23%  Similarity=0.284  Sum_probs=32.3

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.++++|.|.+  |++.|.....|+.|++ .|...++|.|++
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2eq1_A            6 SGTGEKPYKCNE--CGKAFRAHSNLTTHQV-IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCTT--TTCCCSSHHHHHHHHT-TTCCSCCSSCCC
T ss_pred             ccCCCCCeECCc--CChhhCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            366788899966  9999999999999975 777788888864

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.32  E-value=2.9e-07  Score=59.03  Aligned_cols=34  Identities=18%  Similarity=0.289  Sum_probs=30.8

Q ss_pred             cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      .|.|..|++.|.+...|..|++          .|.+++||.|.+
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~----------~H~~~k~~~C~~   45 (46)
T 2ytn_A           12 PYKCNECGKVFTQNSHLARHRG----------IHTGEKPSGPSS   45 (46)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHGG----------GTSCCCCCSCCC
T ss_pred             CeECCCCCCeeCCHHHHHHHhh----------hcCCCCCCCCCC
Confidence            4999999999999999999986          367899999976

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.31  E-value=2.8e-07  Score=59.11  Aligned_cols=40  Identities=25%  Similarity=0.278  Sum_probs=28.9

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      .|.++++|.|.+  |++.|.....|+.|++.+|...++|.|+
T Consensus         6 ~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~~k~~~C~   45 (47)
T 2epx_A            6 SGTGKKPYECIE--CGKAFIQNTSLIRHWRYYHTGEKPSGPS   45 (47)
T ss_dssp             CCCCCCSBCCSS--SCCCBSSHHHHHHHHTTTTTTSCSSSCC
T ss_pred             ccCCCCCEECCc--cCchhCChHHHHHHhHhhcCCCCCCCCC
Confidence            356777788866  8888888888888875367777777765

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.31  E-value=3.6e-07  Score=58.62  Aligned_cols=40  Identities=18%  Similarity=0.139  Sum_probs=32.2

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.++++|.|.+  |++.|.+...|+.|++ .|...++|.|++
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C~~   45 (46)
T 2emg_A            6 SGTGENPFICSE--CGKVFTHKTNLIIHQK-IHTGERPSGPSS   45 (46)
T ss_dssp             CCCSCCSCBCTT--TCCBCSSHHHHHHHHT-TTSCCCCSCSCC
T ss_pred             CCCCCCCEECCc--cCcccCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            366788889966  9999999888998975 677788888864

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.31  E-value=2.9e-07  Score=59.03  Aligned_cols=37  Identities=19%  Similarity=0.214  Sum_probs=18.1

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEF  165 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f  165 (253)
                      |.++++|.|.+  |++.|.+...|+.|++ .|...++|.|
T Consensus         7 H~~~k~~~C~~--C~k~F~~~~~L~~H~~-~H~~~~~~~C   43 (46)
T 2em0_A            7 GMGEKTWKCRE--CDMCFSQASSLRLHQN-VHVGEKPSGP   43 (46)
T ss_dssp             SCCCCCCCCSS--SCCCCSSHHHHHHHGG-GGSSSSCSCS
T ss_pred             cCCCcCeECCC--CCcccCCHHHHHHHHH-HcCCCCCcCC
Confidence            34445555533  5555555555555555 2444444444

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.30  E-value=2.9e-07  Score=59.18  Aligned_cols=38  Identities=26%  Similarity=0.278  Sum_probs=26.6

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      |+++++|.|.+  |++.|.....|+.|++ .|...++|.|+
T Consensus         7 H~~~k~~~C~~--C~k~F~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2emk_A            7 GTGEKPYECKE--CGKAFSQTTHLIQHQR-VHTGEKPSGPS   44 (46)
T ss_dssp             CSSSCSCBCSS--SCCBCSCHHHHHHHHH-HHSSCCCSSCC
T ss_pred             cCCCCceECCC--CCchhCCHHHHHHHHH-HcCCCCCCCCC
Confidence            55677777755  7777777777777764 56666777665

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.30  E-value=2.9e-07  Score=59.06  Aligned_cols=39  Identities=21%  Similarity=0.298  Sum_probs=29.7

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      |.++++|.|.+  |++.|.+...|+.|++ .|...++|.|++
T Consensus         7 H~~~k~~~C~~--C~k~F~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2eq0_A            7 GTGEKPYKCHE--CGKVFRRNSHLARHQL-IHTGEKPSGPSS   45 (46)
T ss_dssp             TTCCCCEECTT--TCCEESSHHHHHHHHT-TTCCCCCSCCSC
T ss_pred             CCCCCCeECCC--CCchhCCHHHHHHHHH-HcCCCCCCCCCC
Confidence            56778888866  8888888888888874 677777777753

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.30  E-value=3e-07  Score=58.87  Aligned_cols=38  Identities=18%  Similarity=0.145  Sum_probs=28.0

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      |.++++|.|.+  |++.|.+...|..|++ +|...++|.|+
T Consensus         7 H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2el4_A            7 GTGVKPYGCSQ--CAKTFSLKSQLIVHQR-SHTGVKPSGPS   44 (46)
T ss_dssp             SCCCCSEECSS--SSCEESSHHHHHHHGG-GSSSCCCSCCT
T ss_pred             CCCCCceECCC--CCchhCCHHHHHHHHH-HhCCCCCCCCC
Confidence            56777788866  8888888888888864 67777777765

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.30  E-value=2.7e-07  Score=59.08  Aligned_cols=39  Identities=21%  Similarity=0.124  Sum_probs=29.8

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      .|+++++|.|.+  |++.|.+...|+.|++ +|...++|.|+
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2emm_A            6 SGTGERPHKCNE--CGKSFIQSAHLIQHQR-IHTGEKPSGPS   44 (46)
T ss_dssp             CSSCCCSEECSS--SCCEESSHHHHHHHHH-HHSCCCTTSSS
T ss_pred             CcCCCCCeeCCC--CChhhCCHHHHHHHHH-HhCCCCCCCCC
Confidence            356778888866  8888888888888874 67777777775

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.30  E-value=3.4e-07  Score=58.61  Aligned_cols=40  Identities=18%  Similarity=0.163  Sum_probs=33.4

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.++++|.|.+  |++.|.+...|..|++ .|...++|.|++
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2ytf_A            6 SGTGEKPFECSE--CQKAFNTKSNLIVHQR-THTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCCSEECSS--SCCEESSHHHHHHHHH-TSCSSSSSCCCC
T ss_pred             CCCCCCCcCCCC--CCcccCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            367888999976  9999999999999985 788888888864

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.30  E-value=2.9e-07  Score=59.16  Aligned_cols=40  Identities=20%  Similarity=0.208  Sum_probs=32.9

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.++++|.|.+  |++.|.+...|+.|++ .|...++|.|++
T Consensus         6 ~H~~~k~~~C~~--C~k~F~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2emj_A            6 SGTGEKPFECAE--CGKSFSISSQLATHQR-IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSEECSS--SSCEESSHHHHHHHHH-HHTTSCSSSSCC
T ss_pred             CCCCCCCEECCC--CCcccCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            367788999966  9999999999999985 677788888864

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.30  E-value=2.8e-07  Score=59.10  Aligned_cols=39  Identities=23%  Similarity=0.260  Sum_probs=28.5

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      |+++++|.|.+  |++.|.....|..|++ .|...++|.|++
T Consensus         7 H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2ema_A            7 GTGEKRYKCNE--CGKVFSRNSQLSQHQK-IHTGEKPSGPSS   45 (46)
T ss_dssp             CTTSCCEECSS--SCCEESSHHHHHHHHT-GGGCCCCCSSSC
T ss_pred             CCCCcCcCCCC--CcchhCCHHHHHHHHH-hcCCCCCCCCCC
Confidence            56777788866  8888888888888874 566777777753

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.30  E-value=3.2e-07  Score=58.98  Aligned_cols=40  Identities=25%  Similarity=0.294  Sum_probs=32.0

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.++++|.|.+  |++.|.+...|+.|++ .|...++|.|+.
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2em6_A            6 SGMGEKCYKCDV--CGKEFSQSSHLQTHQR-VHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCBCSS--SCCBCSSHHHHHHHHT-TTSSSCCCCTTC
T ss_pred             ccCCCCCeECCC--CCcccCCHHHHHHHHH-HcCCCCCCCCCC
Confidence            366788888966  9999988888888874 777788888864

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.30  E-value=3.7e-07  Score=58.51  Aligned_cols=35  Identities=20%  Similarity=0.210  Sum_probs=31.5

Q ss_pred             cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCcccc
Q 025436           93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGC  139 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC  139 (253)
                      .|.|++|++.|.+...|..|++          .|+++++|.|.+  |
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~----------~H~~~~~~~C~~--C   46 (46)
T 2em0_A           12 TWKCRECDMCFSQASSLRLHQN----------VHVGEKPSGPSS--G   46 (46)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHGG----------GGSSSSCSCSSC--C
T ss_pred             CeECCCCCcccCCHHHHHHHHH----------HcCCCCCcCCCC--C
Confidence            4999999999999999999997          367899999976  7

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.30  E-value=2.7e-07  Score=59.18  Aligned_cols=40  Identities=25%  Similarity=0.275  Sum_probs=32.3

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.++++|.|.+  |++.|.+...|..|++ .|...++|.|++
T Consensus         6 ~H~~~~~~~C~~--C~k~F~~~~~L~~H~~-~H~~~~~~~C~~   45 (46)
T 2em3_A            6 SGTGEKPYECKV--CSKAFTQKAHLAQHQK-THTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSEECSS--SCCEESSHHHHHHHHH-HHCCCCCCCSCC
T ss_pred             CCCCCcCeECCC--CCcccCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            366788899966  9999999999999985 677788888864

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.30  E-value=3e-07  Score=59.14  Aligned_cols=33  Identities=18%  Similarity=0.243  Sum_probs=21.8

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|.+|++.|.+...|..|++          .|.+++||.|.+
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~----------~H~~~k~~~C~~   45 (46)
T 2emk_A           13 YECKECGKAFSQTTHLIQHQR----------VHTGEKPSGPSS   45 (46)
T ss_dssp             CBCSSSCCBCSCHHHHHHHHH----------HHSSCCCSSCCC
T ss_pred             eECCCCCchhCCHHHHHHHHH----------HcCCCCCCCCCC
Confidence            666666666666666666664          356778888865

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.30  E-value=2.6e-07  Score=59.13  Aligned_cols=38  Identities=21%  Similarity=0.225  Sum_probs=27.5

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      |+++++|.|.+  |++.|.+...|+.|++ .|...++|.|+
T Consensus         7 H~~~~~~~C~~--C~k~F~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2eoe_A            7 GTGEKPYKCNE--CGKVFTQNSHLANHQR-IHTGVKPSGPS   44 (46)
T ss_dssp             CCCCCSSEETT--TTEECSSHHHHHHHHG-GGSCCCSCSSC
T ss_pred             CCCCCCeECCC--cChhhCCHHHHHHHHH-HcCCCCCCCCC
Confidence            56677777765  7777777777777764 66667777765

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.30  E-value=5.5e-07  Score=57.71  Aligned_cols=28  Identities=14%  Similarity=0.315  Sum_probs=14.8

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |++.|.....|..|++
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~   33 (46)
T 2ema_A            6 SGTGEKRYKCNE--CGKVFSRNSQLSQHQK   33 (46)
T ss_dssp             SCTTSCCEECSS--SCCEESSHHHHHHHHT
T ss_pred             CCCCCcCcCCCC--CcchhCCHHHHHHHHH
Confidence            345555555554  5555555555555543

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.29  E-value=3.1e-07  Score=59.04  Aligned_cols=40  Identities=23%  Similarity=0.234  Sum_probs=33.1

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|+++++|.|.+  |++.|.....|+.|++ .|...++|.|+.
T Consensus         6 ~H~~~k~~~C~~--C~k~F~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2ytp_A            6 SGTGERHYECSE--CGKAFARKSTLIMHQR-IHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCCCEECSS--SCCEESSHHHHHHHHT-TTSCCCCCSSCC
T ss_pred             CcCCCCCeECCc--CCcccCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            367888999976  9999999999999975 788888888864

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.29  E-value=3.8e-07  Score=58.35  Aligned_cols=39  Identities=21%  Similarity=0.153  Sum_probs=29.5

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      .|.++++|.|.+  |++.|.+...|+.|++ .|...++|.|+
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2eme_A            6 SGSGEKPYVCDY--CGKAFGLSAELVRHQR-IHTGEKPSGPS   44 (46)
T ss_dssp             TTCCCCSEECSS--SCCEESSHHHHHHHHG-GGCCCSCCSSC
T ss_pred             CCCCCCCeECCC--CChhhCCHHHHHHHHH-hcCCCCCCCCC
Confidence            356778888866  8888888888888874 67777777775

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.29  E-value=2.7e-07  Score=59.17  Aligned_cols=39  Identities=21%  Similarity=0.240  Sum_probs=28.6

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      |.++++|.|.+  |++.|.+...|..|++ .|...++|.|++
T Consensus         7 H~~~~~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C~~   45 (46)
T 2ytk_A            7 GSGEKPYKCNE--CGKVFTQNSHLTNHWR-IHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSCSEECSS--SCCEESSHHHHHHHHH-HHSSSSCSSCCC
T ss_pred             CCCCCCEeCCc--CCCccCCHHHHHHHHH-HHCCCCCCCCCC
Confidence            56777788865  8888888888888875 666677777753

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.29  E-value=4.2e-07  Score=58.38  Aligned_cols=39  Identities=21%  Similarity=0.239  Sum_probs=29.8

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      .|.++++|.|.+  |++.|.+...|+.|++ .|...++|.|+
T Consensus         6 ~H~~~k~~~C~~--C~k~F~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2emf_A            6 SGTGGKHFECTE--CGKAFTRKSTLSMHQK-IHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSCCEECSS--SCCEESCHHHHHHHGG-GTSCSSCSCCC
T ss_pred             ccCCCCCeECCC--CCchhCCHHHHHHHHH-HhCCCCCCCCC
Confidence            356778888866  8888888888888875 67777777775

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.29  E-value=5.7e-07  Score=58.53  Aligned_cols=29  Identities=21%  Similarity=0.465  Sum_probs=19.9

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhC
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      .|+++++|.|.+  |++.|.+...|..|+++
T Consensus         6 ~~~~~k~~~C~~--C~k~f~~~~~L~~H~~~   34 (48)
T 2epr_A            6 SGRTRKQVACEI--CGKIFRDVYHLNRHKLS   34 (48)
T ss_dssp             CCCCCCSEEETT--TTEEESSHHHHHHHGGG
T ss_pred             CCCCCcCeeCCC--CCcccCCHHHHHHHHHh
Confidence            456667777766  77777777777777653

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.29  E-value=3.9e-07  Score=58.40  Aligned_cols=39  Identities=23%  Similarity=0.313  Sum_probs=29.7

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      |.++++|.|.+  |++.|.+...|+.|++ .|...++|.|+.
T Consensus         7 H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2ep2_A            7 GTGEKPYECSI--CGKSFTKKSQLHVHQQ-IHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCSEECSS--SCCEESSHHHHHHHHH-TTSSCCSCCSCC
T ss_pred             CCCCcCcCCCC--CCcccCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            56778888866  8888888888888874 677777777753

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.29  E-value=3.2e-07  Score=58.72  Aligned_cols=36  Identities=22%  Similarity=0.219  Sum_probs=16.8

Q ss_pred             cCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccc
Q 025436          127 RGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEF  165 (253)
Q Consensus       127 ~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f  165 (253)
                      .++++|.|.+  |++.|.+...|+.|++ .|...++|.|
T Consensus         8 ~~~~~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C   43 (46)
T 2eov_A            8 TGEKPYKCSD--CGKSFTWKSRLRIHQK-CHTGERHSGP   43 (46)
T ss_dssp             SSCCSCBCSS--SCCBCSSHHHHHHHHH-HHSCCSSCCS
T ss_pred             CCCCCccCCc--cChhhCCHHHHHHHHH-hcCCCCCCCC
Confidence            3444455533  5555555555555554 3334444444

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.29  E-value=2.8e-07  Score=58.96  Aligned_cols=37  Identities=22%  Similarity=0.305  Sum_probs=17.4

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEF  165 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f  165 (253)
                      |+++++|.|.+  |++.|.+...|+.|++ .|...++|.|
T Consensus         7 H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C   43 (46)
T 2eq4_A            7 GTGEKLYNCKE--CGKSFSRAPCLLKHER-LHSGEKPSGP   43 (46)
T ss_dssp             SSCCCCCCBTT--TTBCCSCHHHHHHHHH-HCCSSSCCCC
T ss_pred             CCCCCCeECCC--CCCccCchHHHHHHHH-hcCCCCCCCC
Confidence            34444555533  5555555555555555 2344444444

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.29  E-value=2.5e-07  Score=59.33  Aligned_cols=9  Identities=11%  Similarity=-0.264  Sum_probs=4.1

Q ss_pred             cCCCceecC
Q 025436          127 RGYPMYECL  135 (253)
Q Consensus       127 ~gek~y~C~  135 (253)
                      .+++||.|.
T Consensus        36 ~~~k~~~C~   44 (46)
T 2ytg_A           36 TGEKPSGPS   44 (46)
T ss_dssp             SSCCSSCSC
T ss_pred             CCCCCCCCC
Confidence            344445443

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.28  E-value=3.6e-07  Score=58.49  Aligned_cols=42  Identities=17%  Similarity=0.150  Sum_probs=34.4

Q ss_pred             hhHhCcC---cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCcccc
Q 025436           86 DHYNARH---TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGC  139 (253)
Q Consensus        86 ~H~~~~H---~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC  139 (253)
                      +|++++.   .|.|++|++.|.+...|..|++          .|.++++|.|.+  |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~----------~H~~~~~~~C~~--C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQK----------CHTGERHSGPSS--G   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHH----------HHSCCSSCCSCC--C
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHH----------hcCCCCCCCCCC--C
Confidence            4665422   4999999999999999999986          367899999976  7

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.28  E-value=4.3e-07  Score=58.23  Aligned_cols=40  Identities=23%  Similarity=0.262  Sum_probs=32.9

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|+++++|.|.+  |++.|.....|+.|++ .|...++|.|+.
T Consensus         6 ~H~~~~~~~C~~--C~k~F~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2emi_A            6 SGTGERHYECSE--CGKAFIQKSTLSMHQR-IHRGEKPSGPSS   45 (46)
T ss_dssp             SCSSCCCEECSS--SCCEESSHHHHHHHHG-GGCSCCCCSCCC
T ss_pred             ccCCCCCCCCCC--CCcccCCHHHHHHHHh-HhCCCCCCCCCC
Confidence            467888999976  9999999999999975 677788888864

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.28  E-value=3.6e-07  Score=58.61  Aligned_cols=38  Identities=29%  Similarity=0.340  Sum_probs=28.3

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      |+++++|.|.+  |++.|.+...|+.|++ .|...++|.|+
T Consensus         7 H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2eml_A            7 GTGEKPYECSV--CGKAFSHRQSLSVHQR-IHSGKKPSGPS   44 (46)
T ss_dssp             CSSCCSEECSS--SCCEESSHHHHHHHHG-GGSSCCCSCSS
T ss_pred             cCCCCCeeCCC--cCCccCCHHHHHHHHH-HhcCCCCCCCC
Confidence            56777888866  8888888888888874 66677777765

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.28  E-value=3.2e-07  Score=58.83  Aligned_cols=37  Identities=19%  Similarity=0.336  Sum_probs=18.4

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEF  165 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f  165 (253)
                      |+++++|.|.+  |++.|.+...|+.|++ .|...++|.|
T Consensus         7 H~~~~~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2eoq_A            7 GTGEKPFKCDI--CGKSFCGRSRLNRHSM-VHTAEKPSGP   43 (46)
T ss_dssp             SSSSCSCCCSS--SCCCCSSHHHHHHHHH-HTTCCCSSSC
T ss_pred             CCCCCCcCCCc--CCchhCCHHHHHHHHH-HcCCCCCCCC
Confidence            34445555544  5555555555555555 3444444544

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.28  E-value=4e-07  Score=58.39  Aligned_cols=35  Identities=14%  Similarity=0.144  Sum_probs=31.4

Q ss_pred             cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCcccc
Q 025436           93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGC  139 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC  139 (253)
                      .|.|.+|++.|.+...|..|+.          .|++++||.|.+  |
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~----------~H~~~k~~~C~~--C   46 (46)
T 2eoq_A           12 PFKCDICGKSFCGRSRLNRHSM----------VHTAEKPSGPSS--G   46 (46)
T ss_dssp             SCCCSSSCCCCSSHHHHHHHHH----------HTTCCCSSSCCC--C
T ss_pred             CcCCCcCCchhCCHHHHHHHHH----------HcCCCCCCCCCC--C
Confidence            4999999999999999999986          367899999976  7

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.28  E-value=4e-07  Score=58.24  Aligned_cols=38  Identities=21%  Similarity=0.132  Sum_probs=27.1

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      |+++++|.|.+  |++.|.+...|+.|++ .|...++|.|+
T Consensus         7 H~~~~~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2eop_A            7 GTGEKPHECRE--CGKSFSFNSQLIVHQR-IHTGENPSGPS   44 (46)
T ss_dssp             CCCCCSCBCTT--TCCBCSSHHHHHHHHT-TTTTSCCSCCC
T ss_pred             cCCCCCeeCCC--CCchhCCHHHHHHHHH-HcCCCCCCCCC
Confidence            56677777765  7777777777777764 56667777665

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.28  E-value=4.1e-07  Score=58.59  Aligned_cols=40  Identities=20%  Similarity=0.081  Sum_probs=33.3

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.++++|.|.+  |++.|.+...|+.|++ .|...++|.|++
T Consensus         6 ~h~~~k~~~C~~--C~k~F~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2eom_A            6 SGHGERGHRCSD--CGKFFLQASNFIQHRR-IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCCSS--SCCCCSSHHHHHHHHH-HHSSCCCSSCCC
T ss_pred             CCCCCCCcCCCC--CCCeeCChHHHHHHHH-HhCCCCCCCCCC
Confidence            467888999966  9999999999999975 677888888874

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.28  E-value=3.1e-07  Score=58.80  Aligned_cols=33  Identities=15%  Similarity=0.262  Sum_probs=19.2

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|.+|++.|.+...|..|++          .|.+++||.|.+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~----------~H~~~k~~~C~~   45 (46)
T 2eop_A           13 HECRECGKSFSFNSQLIVHQR----------IHTGENPSGPSS   45 (46)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHT----------TTTTSCCSCCCC
T ss_pred             eeCCCCCchhCCHHHHHHHHH----------HcCCCCCCCCCC
Confidence            555555555555555555554          245677777755

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.28  E-value=2.3e-07  Score=60.47  Aligned_cols=37  Identities=16%  Similarity=0.293  Sum_probs=28.1

Q ss_pred             cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCC
Q 025436           93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGL  141 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~k  141 (253)
                      .|.|.+|++.|.+...|..|++          .|++++||.|.+  |++
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~----------~H~~~k~~~C~~--C~k   48 (48)
T 2epr_A           12 QVACEICGKIFRDVYHLNRHKL----------SHSGEKPYSSGP--SSG   48 (48)
T ss_dssp             SEEETTTTEEESSHHHHHHHGG----------GSCSCCCCCSCC--CCC
T ss_pred             CeeCCCCCcccCCHHHHHHHHH----------hcCCCCCccCCC--CCC
Confidence            4788888888888888888876          356777888866  875

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.28  E-value=3.7e-07  Score=58.67  Aligned_cols=37  Identities=19%  Similarity=0.284  Sum_probs=17.2

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEF  165 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f  165 (253)
                      |+++++|.|.+  |++.|.+...|+.|++ .|...++|.|
T Consensus         7 H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2ely_A            7 GTGEKPFKCVE--CGKGFSRRSALNVHHK-LHTGEKPSGP   43 (46)
T ss_dssp             CCCCCSBCCSS--SCCCBSSTTHHHHHHH-HHSCCSSCSC
T ss_pred             CCCCCCcccCc--cCcccCCHHHHHHHHH-HcCCCCCCCC
Confidence            33444455533  5555555555555554 2334444444

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.28  E-value=3.6e-07  Score=58.72  Aligned_cols=40  Identities=28%  Similarity=0.313  Sum_probs=32.3

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.++++|.|.+  |++.|.....|+.|++ .|...++|.|+.
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2em4_A            6 SGTGQRPYECIE--CGKAFKTKSSLICHRR-SHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSEECSS--SCCEESSHHHHHHHHH-HHSSSSCCCCCC
T ss_pred             ccCCCcCcCCCC--CCCccCCHHHHHHHHH-hcCCCCCCCCCC
Confidence            367788899966  9999999999999975 677788888864

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.28  E-value=3.3e-07  Score=58.62  Aligned_cols=35  Identities=23%  Similarity=0.298  Sum_probs=14.5

Q ss_pred             CCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccc
Q 025436          128 GYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEF  165 (253)
Q Consensus       128 gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f  165 (253)
                      ++++|.|.+  |++.|.+...|+.|++ +|...++|.|
T Consensus         9 ~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C   43 (46)
T 2ytr_A            9 GEKPYKCNE--CGKAFSQTSKLARHQR-IHTGEKPSGP   43 (46)
T ss_dssp             SCCTTCCTT--TCCCCSSHHHHHHHHT-TTTTCSCCCS
T ss_pred             CCcCcCCCC--CCCccCCHHHHHHHHH-hcCCCCCCCC
Confidence            344444433  4444444444444444 2333334433

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.28  E-value=3.1e-07  Score=59.00  Aligned_cols=39  Identities=21%  Similarity=0.232  Sum_probs=33.1

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      .|.++++|.|.+  |++.|.....|+.|++ .|...++|.|+
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2yto_A            6 SGTGEKPYKCSD--CGKAFTRKSGLHIHQQ-SHTGERHSGPS   44 (46)
T ss_dssp             CCCSCCCEECSS--SCCEESSHHHHHHHHH-HHTCCCBTTTB
T ss_pred             ccCCCCCEECcc--cCCccCCHhHHHHHHH-HcCCCCCCCCC
Confidence            367889999977  9999999999999985 67888888886

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=2.8e-07  Score=59.11  Aligned_cols=38  Identities=29%  Similarity=0.352  Sum_probs=27.6

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      |.++++|.|.+  |++.|.....|+.|++ .|...++|.|+
T Consensus         7 H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2emp_A            7 GTGVKPYMCNE--CGKAFSVYSSLTTHQV-IHTGEKPSGPS   44 (46)
T ss_dssp             SSCCCSEECSS--SCCEESCHHHHHHHHH-HHHCCSCCSCC
T ss_pred             cCCCcCeECCC--CCchhCCHHHHHHHHH-HcCCCCCCCCC
Confidence            56677788865  8888888777877774 56667777765

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=4.1e-07  Score=57.51  Aligned_cols=39  Identities=21%  Similarity=0.189  Sum_probs=33.0

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      .|.++++|.|.+  |++.|.+...|..|++ .|...++|.|+
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (44)
T 2eof_A            6 SGTGEKPYECNE--CQKAFNTKSNLMVHQR-THTGESGPSSG   44 (44)
T ss_dssp             CCSCCCSEECTT--TCCEESCHHHHHHHHH-HTTTSSCSCCC
T ss_pred             CCCCCCCeECCC--CCcccCCHhHHHHHHH-HhCCCCCCCCC
Confidence            367889999977  9999999999999985 78888888874

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=2.7e-07  Score=59.03  Aligned_cols=40  Identities=23%  Similarity=0.237  Sum_probs=31.6

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.++++|.|.+  |++.|.+...|+.|++ .|...++|.|++
T Consensus         6 ~H~~~~~~~C~~--C~k~f~~~~~L~~H~~-~H~~~kp~~C~~   45 (46)
T 2eor_A            6 SGTGEKPYNCEE--CGKAFIHDSQLQEHQR-IHTGEKPSGPSS   45 (46)
T ss_dssp             SSSCCCSEECTT--TCCEESSHHHHHHHHH-HHHSCCCSSSTT
T ss_pred             CcCCCcCccCCC--CCCCcCCHHHHHHHHH-hcCCCCCCCCCC
Confidence            366788888866  8888888888888875 677778888764

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=4.8e-07  Score=58.26  Aligned_cols=40  Identities=25%  Similarity=0.289  Sum_probs=33.1

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.++++|.|.+  |++.|.+...|+.|++ .|...++|.|+.
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2eon_A            6 SGTGEKPYKCQV--CGKAFRVSSHLVQHHS-VHSGERPSGPSS   45 (46)
T ss_dssp             SCSSCCSCBCSS--SCCBCSSHHHHHHHTT-TTTSCCSCTTSC
T ss_pred             CCCCCcccCCCC--CCcccCcHHHHHHHHH-hcCCCCCCCCCC
Confidence            467888999977  9999999999999985 788888888864

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=4.1e-07  Score=57.54  Aligned_cols=39  Identities=21%  Similarity=0.215  Sum_probs=32.0

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      .|.++++|.|.+  |++.|.+...|..|++ .|...++|.|+
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (44)
T 2en7_A            6 SGTGMKPYVCNE--CGKAFRSKSYLIIHTR-THTGESGPSSG   44 (44)
T ss_dssp             CSSSSSSSCCTT--TCCCCSSHHHHHHHHT-TTCCSSSSCCC
T ss_pred             CCCCCcCeECCC--CCCccCCHHHHHHHhh-hcCCCCCCCCC
Confidence            367788999966  9999999999999984 77788888774

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.27  E-value=5.1e-07  Score=57.72  Aligned_cols=35  Identities=14%  Similarity=0.162  Sum_probs=31.4

Q ss_pred             cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCcccc
Q 025436           93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGC  139 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC  139 (253)
                      .|.|.+|++.|.+...|..|++          .|.+++||.|.+  |
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~----------~H~~~~~~~C~~--C   46 (46)
T 2eq4_A           12 LYNCKECGKSFSRAPCLLKHER----------LHSGEKPSGPSS--G   46 (46)
T ss_dssp             CCCBTTTTBCCSCHHHHHHHHH----------HCCSSSCCCCCC--C
T ss_pred             CeECCCCCCccCchHHHHHHHH----------hcCCCCCCCCCC--C
Confidence            4999999999999999999996          367899999976  7

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.26  E-value=2.4e-07  Score=59.42  Aligned_cols=33  Identities=18%  Similarity=0.284  Sum_probs=18.4

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|..|++.|.+...|..|++          .|.+++||.|.+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~----------~H~~~~~~~C~~   45 (46)
T 2ytk_A           13 YKCNECGKVFTQNSHLTNHWR----------IHTGEKPSGPSS   45 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHH----------HHSSSSCSSCCC
T ss_pred             EeCCcCCCccCCHHHHHHHHH----------HHCCCCCCCCCC
Confidence            444445555555555555543          245677777755

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.26  E-value=3.9e-07  Score=58.45  Aligned_cols=35  Identities=23%  Similarity=0.339  Sum_probs=14.5

Q ss_pred             CCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccc
Q 025436          128 GYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEF  165 (253)
Q Consensus       128 gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f  165 (253)
                      ++++|.|.+  |++.|.+...|+.|++ .|...++|.|
T Consensus         9 ~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C   43 (46)
T 2epz_A            9 GEKPFDCID--CGKAFSDHIGLNQHRR-IHTGEKPSGP   43 (46)
T ss_dssp             CCCSBCCTT--TCCCBSSHHHHHHHHT-TTTTCCCCSS
T ss_pred             CCCCeECCC--CCceeCCHHHHHHHHH-HhCCCCCCCC
Confidence            344444433  4444444444444444 2333344433

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.26  E-value=3.4e-07  Score=58.69  Aligned_cols=38  Identities=24%  Similarity=0.245  Sum_probs=27.5

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      |.++++|.|.+  |++.|.+...|..|++ .|...++|.|+
T Consensus         7 H~~~k~~~C~~--C~k~F~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2emy_A            7 GTGENPYECHE--CGKAFSRKYQLISHQR-THAGEKPSGPS   44 (46)
T ss_dssp             CCSSCCEECSS--SCCEESSHHHHHHHHH-HHTTSCCSCSS
T ss_pred             CCCCcCcCCCC--CCcccCcHHHHHHHHH-HcCCCCCCCCC
Confidence            56677788865  8888888778877764 56667777765

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.26  E-value=2.6e-07  Score=59.27  Aligned_cols=33  Identities=15%  Similarity=0.174  Sum_probs=17.4

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|.+|++.|.+...|..|++          .|.+++||.|.+
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~----------~H~~~k~~~C~~   45 (46)
T 2emy_A           13 YECHECGKAFSRKYQLISHQR----------THAGEKPSGPSS   45 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHH----------HHTTSCCSCSSC
T ss_pred             cCCCCCCcccCcHHHHHHHHH----------HcCCCCCCCCCC
Confidence            444444444444444444443          245677777755

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.26  E-value=3.9e-07  Score=58.56  Aligned_cols=38  Identities=18%  Similarity=0.115  Sum_probs=27.9

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      |.++++|.|.+  |++.|.+...|..|++ .|...++|.|+
T Consensus         7 H~~~~~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2em5_A            7 GSSTKSHQCHE--CGRGFTLKSHLNQHQR-IHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCSEECSS--SCCEESSHHHHHHHHT-TTSCSCCSSCC
T ss_pred             CCCCCCeECCc--CCCccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            56677788866  8888888888888864 67777777765

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.26  E-value=5.4e-07  Score=57.75  Aligned_cols=35  Identities=14%  Similarity=0.143  Sum_probs=31.4

Q ss_pred             cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCcccc
Q 025436           93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGC  139 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC  139 (253)
                      .|.|.+|++.|.+...|..|++          .|+++++|.|.+  |
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~----------~H~~~k~~~C~~--C   46 (46)
T 2epz_A           12 PFDCIDCGKAFSDHIGLNQHRR----------IHTGEKPSGPSS--G   46 (46)
T ss_dssp             SBCCTTTCCCBSSHHHHHHHHT----------TTTTCCCCSSCC--C
T ss_pred             CeECCCCCceeCCHHHHHHHHH----------HhCCCCCCCCCC--C
Confidence            4999999999999999999997          367899999976  7

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.26  E-value=3e-07  Score=59.00  Aligned_cols=38  Identities=24%  Similarity=0.286  Sum_probs=28.3

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      |+++++|.|.+  |++.|.+...|+.|++ .|...++|.|+
T Consensus         7 H~~~k~~~C~~--C~k~F~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2emh_A            7 GTGERPYICTV--CGKAFTDRSNLIKHQK-IHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCSEECTT--TCCEESSHHHHHHHHH-HHHCSSCSSSC
T ss_pred             CCCCCCcCCCC--CCchhCCHHHHHHHHH-hcCCCCCCCCC
Confidence            56777888866  8888888888888874 66667777775

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.25  E-value=2.6e-07  Score=59.31  Aligned_cols=33  Identities=15%  Similarity=0.234  Sum_probs=18.2

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|.+|++.|.+...|..|++          .|.+++||.|.+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~----------~H~~~k~~~C~~   45 (46)
T 2emp_A           13 YMCNECGKAFSVYSSLTTHQV----------IHTGEKPSGPSS   45 (46)
T ss_dssp             EECSSSCCEESCHHHHHHHHH----------HHHCCSCCSCCC
T ss_pred             eECCCCCchhCCHHHHHHHHH----------HcCCCCCCCCCC
Confidence            444445555555555555543          245677777755

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.25  E-value=4.2e-07  Score=58.12  Aligned_cols=38  Identities=18%  Similarity=0.097  Sum_probs=28.3

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      |.++++|.|.+  |++.|.....|+.|++ .|...++|.|+
T Consensus         7 H~~~k~~~C~~--C~k~F~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2epw_A            7 GTGEKPCKCTE--CGKAFCWKSQLIMHQR-THVDDKHSGPS   44 (46)
T ss_dssp             CCCCCSEECSS--SCCEESSSHHHHHHHH-HCCSCCCSCCC
T ss_pred             CCCCCCeeCCC--CCCccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            56777888866  8888888888888874 57777777765

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.25  E-value=5.1e-07  Score=58.00  Aligned_cols=35  Identities=14%  Similarity=0.211  Sum_probs=31.5

Q ss_pred             cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCcccc
Q 025436           93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGC  139 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC  139 (253)
                      .|.|.+|++.|.+...|..|++          .|.+++||.|.+  |
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~----------~H~~~k~~~C~~--C   46 (46)
T 2ely_A           12 PFKCVECGKGFSRRSALNVHHK----------LHTGEKPSGPSS--G   46 (46)
T ss_dssp             SBCCSSSCCCBSSTTHHHHHHH----------HHSCCSSCSCCC--C
T ss_pred             CcccCccCcccCCHHHHHHHHH----------HcCCCCCCCCCC--C
Confidence            4999999999999999999997          367899999976  7

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.25  E-value=5.6e-07  Score=56.45  Aligned_cols=38  Identities=24%  Similarity=0.294  Sum_probs=31.8

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEF  165 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f  165 (253)
                      .|+++++|.|.+  |++.|.+...|+.|++ .|...++|.|
T Consensus         4 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C   41 (42)
T 2el5_A            4 GSSGENPYECSE--CGKAFNRKDQLISHQR-THAGESGPSS   41 (42)
T ss_dssp             SSSSCCSEECSS--SCCEESSHHHHHHHHG-GGCCCCSCCC
T ss_pred             CCCCCCCccCCC--cChhhCCHHHHHHHHH-hcCCCCCCCC
Confidence            467888999966  9999999999999985 6777888876

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.25  E-value=5.1e-07  Score=57.99  Aligned_cols=36  Identities=17%  Similarity=0.143  Sum_probs=14.8

Q ss_pred             cCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccc
Q 025436          127 RGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEF  165 (253)
Q Consensus       127 ~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f  165 (253)
                      +++++|.|.+  |++.|.+...|+.|++ .|...++|.|
T Consensus         8 ~~~k~~~C~~--C~k~F~~~~~L~~H~~-~H~~~~~~~C   43 (46)
T 2elz_A            8 SVEKPYKCED--CGKGYNRRLNLDMHQR-VHMGEKTSGP   43 (46)
T ss_dssp             CCCSSCBCSS--SCCBCSSHHHHHHHGG-GGGSCCCCCS
T ss_pred             CCCCCeeCcc--cCchhCCHHHHHHHHH-hcCCCCCCCC
Confidence            3344444433  4444444444444444 2333334433

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.25  E-value=3e-07  Score=59.00  Aligned_cols=36  Identities=22%  Similarity=0.269  Sum_probs=16.2

Q ss_pred             cCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccc
Q 025436          127 RGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEF  165 (253)
Q Consensus       127 ~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f  165 (253)
                      .++++|.|.+  |++.|.+...|+.|++ +|...++|.|
T Consensus         8 ~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C   43 (46)
T 2ytd_A            8 SGEKPYKCSE--CGKAFHRHTHLNEHRR-IHTGYRPSGP   43 (46)
T ss_dssp             CCCCSEECSS--SCCEESSHHHHHHHHH-HHTCCCSSCS
T ss_pred             CCCcCeECCC--CCCeeCChHHHHHHHH-HcCCCCCCCC
Confidence            3444444433  4444444444444444 2333444444

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.25  E-value=5.8e-07  Score=57.58  Aligned_cols=38  Identities=21%  Similarity=0.240  Sum_probs=27.7

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      |+++++|.|.+  |++.|.+...|+.|++ +|...++|.|+
T Consensus         7 H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2em7_A            7 GTGEKPYKCEE--CGKGFICRRDLYTHHM-VHTGEKPSGPS   44 (46)
T ss_dssp             SSCCCSEECSS--SCCEESCHHHHHHHGG-GGTTCCCSSTT
T ss_pred             CCCCcCccCCC--ccchhCCHHHHHHHHH-HhCCCCCCCCC
Confidence            56677788855  8888888888888864 66677777765

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.24  E-value=5.3e-07  Score=57.80  Aligned_cols=38  Identities=21%  Similarity=0.259  Sum_probs=28.1

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      |+++++|.|.+  |++.|.+...|+.|++ .|...++|.|+
T Consensus         7 H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2ene_A            7 GTGEKPYKCNE--CGKVFRHNSYLSRHQR-IHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSEECSS--SCCEESSHHHHHHHHT-TTCCCCCCSCC
T ss_pred             CCCCCCeECCC--CCchhCChHHHHHHHh-hcCCCCCCCCC
Confidence            56777788866  8888888888888874 57777777765

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.24  E-value=4.6e-07  Score=57.95  Aligned_cols=35  Identities=14%  Similarity=0.181  Sum_probs=31.3

Q ss_pred             cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCcccc
Q 025436           93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGC  139 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC  139 (253)
                      .|.|.+|++.|.+...|..|++.          |.+++||.|.+  |
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~----------H~~~~~~~C~~--C   46 (46)
T 2ytr_A           12 PYKCNECGKAFSQTSKLARHQRI----------HTGEKPSGPSS--G   46 (46)
T ss_dssp             TTCCTTTCCCCSSHHHHHHHHTT----------TTTCSCCCSCC--C
T ss_pred             CcCCCCCCCccCCHHHHHHHHHh----------cCCCCCCCCCC--C
Confidence            39999999999999999999973          67899999976  7

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.24  E-value=4.4e-07  Score=58.19  Aligned_cols=42  Identities=17%  Similarity=0.232  Sum_probs=34.5

Q ss_pred             hhHhCcC---cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCcccc
Q 025436           86 DHYNARH---TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGC  139 (253)
Q Consensus        86 ~H~~~~H---~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC  139 (253)
                      .|++++.   .|.|.+|++.|.+...|..|++          .|.+++||.|.+  |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~----------~H~~~~~~~C~~--C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRR----------IHTGYRPSGPSS--G   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHH----------HHTCCCSSCSSC--C
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHH----------HcCCCCCCCCCC--C
Confidence            4665422   4999999999999999999986          467899999976  7

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.24  E-value=4.9e-07  Score=57.40  Aligned_cols=39  Identities=15%  Similarity=0.119  Sum_probs=28.3

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      .|.++++|.|.+  |++.|.+...|+.|++ .|...++|.|+
T Consensus         4 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C~   42 (44)
T 2emx_A            4 GSSGEKPFGCSC--CEKAFSSKSYLLVHQQ-THAEEKPSGPS   42 (44)
T ss_dssp             CCSSCCCEECSS--SSCEESSHHHHHHHHH-HHTSSCSCSCC
T ss_pred             CcCCCcCccCCC--CCcccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            356777788866  8888888888888874 56667777765

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.24  E-value=6.8e-07  Score=57.40  Aligned_cols=38  Identities=21%  Similarity=0.235  Sum_probs=27.0

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      |.++++|.|.+  |++.|.+...|+.|++ .|...++|.|+
T Consensus         7 H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2ytq_A            7 GAGEKPYGCSE--CGKAFSSKSYLIIHMR-THSGEKPSGPS   44 (46)
T ss_dssp             SSCCCSCBCSS--SCCBCSCHHHHHHHHT-TTCCSCSSCCC
T ss_pred             cCCCCCcCCCc--cChhhCChHHHHHHHH-HhCCCCCCCCC
Confidence            56677777755  7777777777777764 56667777665

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.24  E-value=2.6e-07  Score=59.25  Aligned_cols=26  Identities=15%  Similarity=0.388  Sum_probs=13.4

Q ss_pred             cCCCcceEecCCCCCcccCChhHHHhhH
Q 025436           61 TEDGRRVCCPIVGCNARMRSLEEFEDHY   88 (253)
Q Consensus        61 h~~~k~f~C~~~gC~k~F~s~~~L~~H~   88 (253)
                      |+++++|.|.+  |++.|.+...|..|+
T Consensus         7 H~~~k~~~C~~--C~k~F~~~~~L~~H~   32 (46)
T 2emh_A            7 GTGERPYICTV--CGKAFTDRSNLIKHQ   32 (46)
T ss_dssp             CSCCCSEECTT--TCCEESSHHHHHHHH
T ss_pred             CCCCCCcCCCC--CCchhCCHHHHHHHH
Confidence            44555555544  555555555555554

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.24  E-value=3.3e-07  Score=58.93  Aligned_cols=40  Identities=30%  Similarity=0.304  Sum_probs=32.9

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.++++|.|.+  |++.|.....|..|++ .|...++|.|+.
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C~~   45 (46)
T 2eoz_A            6 SGTGEKPYSCNV--CGKAFVLSAHLNQHLR-VHTQETLSGPSS   45 (46)
T ss_dssp             CCSSCCSEEETT--TTEEESSHHHHHHHHH-HHSSCCSSSCCC
T ss_pred             cCCCCCCeECcc--cChhhCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            367888999976  9999999999999985 677788888863

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.24  E-value=3.1e-07  Score=58.92  Aligned_cols=25  Identities=28%  Similarity=0.507  Sum_probs=10.6

Q ss_pred             CCCceecCccccCCcCCChhHHHhHHh
Q 025436          128 GYPMYECLVEGCGLKFKNYKSRQQHLV  154 (253)
Q Consensus       128 gek~y~C~vegC~kkF~t~~~rk~Hl~  154 (253)
                      ++++|.|.+  |++.|.+...|+.|++
T Consensus         9 ~~k~~~C~~--C~k~f~~~~~L~~H~~   33 (46)
T 2yu8_A            9 GEKPYKCNE--CGKVFTQNSHLARHRR   33 (46)
T ss_dssp             CCSSEECSS--SCCEESSSHHHHHHTH
T ss_pred             CCCCeECCc--CCchhCCHHHHHHHHH
Confidence            344444433  4444444444444444

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.24  E-value=4.4e-07  Score=58.17  Aligned_cols=39  Identities=18%  Similarity=0.252  Sum_probs=29.1

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      .|+++++|.|.+  |++.|.+...|..|++ .|...++|.|+
T Consensus         6 ~H~~~~~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2en1_A            6 SGSGEKPFKCEE--CGKRFTQNSQLHSHQR-VHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSEEETT--TTEEESSHHHHHHHGG-GGSCCCCSCCC
T ss_pred             CCCCCCCeeCCC--CCcccCCHHHHHHHHH-HcCCCCCCCCC
Confidence            356777888866  8888888888888874 67777777775

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.24  E-value=6.1e-07  Score=57.04  Aligned_cols=40  Identities=18%  Similarity=0.199  Sum_probs=33.4

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|+++++|.|.+  |++.|.+...|+.|++ .|...++|.|++
T Consensus         4 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   43 (43)
T 2yrm_A            4 GSSGNGAFFCNE--CDCRFSEEASLKRHTL-QTHSDKSGPSSG   43 (43)
T ss_dssp             CCSSSCCBCCSS--SCCCBSSHHHHHHHHH-HHTCTTCSSSCC
T ss_pred             CcCCCCCEECCC--CCCeeCChHHHHHHHH-hhCCCCCccCCC
Confidence            467888999966  9999999999999985 677888888863

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.24  E-value=5.9e-07  Score=57.67  Aligned_cols=40  Identities=18%  Similarity=0.189  Sum_probs=32.5

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.++++|.|.+  |++.|.+...|..|++ .|...++|.|++
T Consensus         6 ~H~~~k~~~C~~--C~k~F~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2en9_A            6 SGAGKKLFKCNE--CKKTFTQSSSLTVHQR-IHTGEKPSGPSS   45 (46)
T ss_dssp             SCCSSCCCBCTT--TCCBCSSHHHHHHHHH-HHTSSCCCSCCC
T ss_pred             CCCCCCCEECCc--cCcccCCHHHHHHHHH-HcCCCCCCCCCC
Confidence            367788899966  9999999999999975 677788888864

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.23  E-value=6.7e-07  Score=57.43  Aligned_cols=35  Identities=20%  Similarity=0.202  Sum_probs=31.5

Q ss_pred             cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCcccc
Q 025436           93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGC  139 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC  139 (253)
                      .|.|..|++.|.+...|..|++          .|.+++||.|.+  |
T Consensus        12 ~~~C~~C~k~F~~~~~L~~H~~----------~H~~~~~~~C~~--C   46 (46)
T 2elz_A           12 PYKCEDCGKGYNRRLNLDMHQR----------VHMGEKTSGPSS--G   46 (46)
T ss_dssp             SCBCSSSCCBCSSHHHHHHHGG----------GGGSCCCCCSCC--C
T ss_pred             CeeCcccCchhCCHHHHHHHHH----------hcCCCCCCCCCC--C
Confidence            4999999999999999999997          367899999976  7

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.23  E-value=6.7e-07  Score=55.93  Aligned_cols=38  Identities=26%  Similarity=0.319  Sum_probs=32.9

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEF  165 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f  165 (253)
                      .|.++++|.|.+  |++.|.....|+.|++ +|...++|.|
T Consensus         4 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQE--CGKSFRQKGSLTLHER-IHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSS--SCCEESSHHHHHHHGG-GCCCCSCSCC
T ss_pred             ccCCCCCeECCC--CCCCcCCHHHHHHHHH-HhCCCCCcCC
Confidence            467899999977  9999999999999985 7888888865

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.23  E-value=4.7e-07  Score=57.37  Aligned_cols=39  Identities=23%  Similarity=0.258  Sum_probs=32.6

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      .|+++++|.|.+  |++.|.+...|..|++ .|...++|.|+
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (44)
T 2eoj_A            6 SGTGENPYECCE--CGKVFSRKDQLVSHQK-THSGQSGPSSG   44 (44)
T ss_dssp             SSSSCCSCEETT--TTEECSSHHHHHHHHT-TSSSSCSCCCC
T ss_pred             ccCCCcCeeCCC--CCCccCCHHHHHHHHH-HcCCCCCCCCC
Confidence            467889999977  9999999999999985 68778888774

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.23  E-value=5.3e-07  Score=57.26  Aligned_cols=39  Identities=23%  Similarity=0.205  Sum_probs=32.7

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      .|.++++|.|.+  |++.|.....|+.|++ .|...++|.|+
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (44)
T 2emb_A            6 SGHTRKRYECSK--CQATFNLRKHLIQHQK-THAAKSGPSSG   44 (44)
T ss_dssp             CCCCCSSEECTT--TCCEESCHHHHHHHGG-GGCCCCCTTCC
T ss_pred             ccCCCCCeECCC--CCCccCCHHHHHHHHH-HcCCCCCcCCC
Confidence            367888999976  9999999999999985 78888888774

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.23  E-value=3.7e-07  Score=58.68  Aligned_cols=38  Identities=26%  Similarity=0.308  Sum_probs=26.9

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      |.++++|.|.+  |++.|.+...|..|++ .|...++|.|+
T Consensus         7 H~~~k~~~C~~--C~k~F~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2eoo_A            7 GSGERPYGCNE--CGKNFGRHSHLIEHLK-RHFREKSSGPS   44 (46)
T ss_dssp             CSCCCCEECSS--SCCEESSHHHHHHHHH-HHHSTTSSCCS
T ss_pred             CCCCCCEEccc--cCcccCCHHHHHHHHH-HHcCCCCCCCC
Confidence            56677777755  7777777777777764 56666777664

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.23  E-value=4.1e-07  Score=58.34  Aligned_cols=40  Identities=18%  Similarity=0.191  Sum_probs=35.1

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|+++++|.|.+  |++.|.+...|+.|++ +|...++|.|+.
T Consensus         6 ~H~~~~~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2ytg_A            6 SGTGEKPFKCGE--CGKSYNQRVHLTQHQR-VHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSEECTT--TCCEESSSHHHHTTGG-GGSSCCSSCSCC
T ss_pred             CCCCCCCeECCC--CCcccCCHHHHHHHHH-HcCCCCCCCCCC
Confidence            467899999977  9999999999999985 788889998863

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.23  E-value=6.1e-07  Score=57.50  Aligned_cols=33  Identities=18%  Similarity=0.273  Sum_probs=23.8

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|..|++.|.+...|..|++          .|.+++||.|.+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~----------~H~~~k~~~C~~   45 (46)
T 2eq2_A           13 YQCNECGKAFSQTSKLARHQR----------VHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCSSCCCCSSHHHHHHHGG----------GGCCCCCCCCCC
T ss_pred             eECCCCCcccCCHHHHHHHHH----------HcCCCCCCCCCC
Confidence            667777777777777777765          356788899865

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.22  E-value=5.3e-07  Score=56.42  Aligned_cols=38  Identities=24%  Similarity=0.255  Sum_probs=30.9

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEF  165 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f  165 (253)
                      .|.++++|.|.+  |++.|.+...|..|++ +|...++|.|
T Consensus         5 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C   42 (42)
T 2ytb_A            5 SSGGEKPYRCDQ--CGKAFSQKGSLIVHIR-VHTGSGPSSG   42 (42)
T ss_dssp             CCCSCCSBCCTT--TTCCBSSHHHHHTTGG-GTSCCSCCCC
T ss_pred             ccCCCCCeeCCC--ccchhCCHHHHHHHHH-HhCCCCCCCC
Confidence            367888999966  9999999999999975 7777777765

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.22  E-value=3.2e-07  Score=58.81  Aligned_cols=35  Identities=20%  Similarity=0.246  Sum_probs=31.5

Q ss_pred             cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCcccc
Q 025436           93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGC  139 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC  139 (253)
                      .|.|++|++.|.+...|..|++          .|.+++||.|.+  |
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~----------~H~~~~~~~C~~--C   46 (46)
T 2yu8_A           12 PYKCNECGKVFTQNSHLARHRR----------VHTGGKPSGPSS--G   46 (46)
T ss_dssp             SEECSSSCCEESSSHHHHHHTH----------HHHSCCCSCSCC--C
T ss_pred             CeECCcCCchhCCHHHHHHHHH----------hcCCCCCCCCCC--C
Confidence            4999999999999999999996          367899999976  7

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.22  E-value=6.8e-07  Score=57.15  Aligned_cols=38  Identities=21%  Similarity=0.236  Sum_probs=27.3

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      |+++++|.|.+  |++.|.+...|+.|++ .|...++|.|+
T Consensus         7 H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2em9_A            7 GTGEKPYNCKE--CGKSFRWASCLLKHQR-VHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSEECSS--SCCEESSHHHHHHHGG-GGTSCCCCSTT
T ss_pred             CCCCcCeECCc--cccccCChHHHHHHHH-HhCCCCCCCCC
Confidence            56677777765  7777777777777764 56667777664

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.22  E-value=5e-07  Score=57.78  Aligned_cols=40  Identities=23%  Similarity=0.237  Sum_probs=34.4

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.++++|.|.+  |++.|.+...|+.|++ +|...++|.|++
T Consensus         6 ~h~~~k~~~C~~--C~k~F~~~~~L~~H~~-~H~~~k~~~C~~   45 (45)
T 2epu_A            6 SGTGQKPFECTH--CGKSFRAKGNLVTHQR-IHTGEKSGPSSG   45 (45)
T ss_dssp             CCCSCCSEEETT--TTEEESSHHHHHHHHT-TTSSCCCCCSCC
T ss_pred             CCCCCcCccCCC--CCCccCChHHHHHHHH-HhCCCCCCCCCC
Confidence            467889999977  9999999999999985 788889998863

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.22  E-value=3.3e-07  Score=58.89  Aligned_cols=33  Identities=12%  Similarity=0.068  Sum_probs=17.3

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|++|++.|.+...|..|++          .|.++++|.|.+
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~----------~H~~~k~~~C~~   45 (46)
T 2eoo_A           13 YGCNECGKNFGRHSHLIEHLK----------RHFREKSSGPSS   45 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHH----------HHHSTTSSCCSC
T ss_pred             EEccccCcccCCHHHHHHHHH----------HHcCCCCCCCCC
Confidence            444444444444444444443          245667777755

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.22  E-value=7.4e-07  Score=57.20  Aligned_cols=28  Identities=11%  Similarity=0.211  Sum_probs=15.1

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |++.|.+...|..|++
T Consensus         6 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~   33 (46)
T 2em8_A            6 SGSGEKPYKCVE--CGKGYKRRLDLDFHQR   33 (46)
T ss_dssp             CCCSCCSEECSS--SCCEESSHHHHHHHHH
T ss_pred             CCCCCCCeECcc--cCchhCCHHHHHHHHH
Confidence            345555555554  5555555555555553

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.22  E-value=6.2e-07  Score=57.57  Aligned_cols=40  Identities=20%  Similarity=0.258  Sum_probs=30.8

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.++++|.|.+  |++.|.....|+.|++ .|...++|.|++
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2em2_A            6 SGSGEKPFKCKE--CGKAFRQNIHLASHLR-IHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCSEECSS--SCCEESSHHHHHHHHH-HHCCCCSSCSSC
T ss_pred             CCCCCCCEECCc--CCchhCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            366788888866  8888888888888875 677778887764

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.22  E-value=6e-07  Score=57.65  Aligned_cols=40  Identities=20%  Similarity=0.109  Sum_probs=33.0

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCC-CCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKF-PTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~-p~~f~f~~  167 (253)
                      .|.++++|.|.+  |++.|.....|+.|++ .|.. .++|.|+.
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~~C~~   46 (46)
T 2eoy_A            6 SGQKEKCFKCNK--CEKTFSCSKYLTQHER-IHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCSCCEECSS--SCCEESSSHHHHHHHT-TCCSCCTTSSSCC
T ss_pred             ccCCCCCEECcC--CCCcCCCHHHHHHHHH-HcCCCCCCCCCCC
Confidence            367888999977  9999999999999984 7777 88888863

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.22  E-value=5.4e-07  Score=58.00  Aligned_cols=25  Identities=36%  Similarity=0.664  Sum_probs=10.5

Q ss_pred             CCCceecCccccCCcCCChhHHHhHHh
Q 025436          128 GYPMYECLVEGCGLKFKNYKSRQQHLV  154 (253)
Q Consensus       128 gek~y~C~vegC~kkF~t~~~rk~Hl~  154 (253)
                      ++++|.|.+  |++.|.+...|+.|++
T Consensus         9 ~~k~~~C~~--C~k~f~~~~~L~~H~~   33 (46)
T 2ytm_A            9 GEKPYKCME--CGKAFGDNSSCTQHQR   33 (46)
T ss_dssp             SCCSSSBTT--TTBCCSSHHHHHHHHH
T ss_pred             CCCCcCCCC--CCchhCCHHHHHHHHH
Confidence            344444433  4444444444444444

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.21  E-value=8.1e-07  Score=56.90  Aligned_cols=33  Identities=15%  Similarity=0.129  Sum_probs=17.5

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|.+|++.|.+...|..|++          .|++++||.|.+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~----------~H~~~k~~~C~~   45 (46)
T 2yso_A           13 HQCRECGEIFFQYVSLIEHQV----------LHMGQKNSGPSS   45 (46)
T ss_dssp             EECTTTCCEESSHHHHHHHHH----------HHSCCSCCCTTC
T ss_pred             EEccccChhhCCHHHHHHHHH----------HhCCCCCCCCCC
Confidence            444444444444444444443          245677777755

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.21  E-value=5.9e-07  Score=57.42  Aligned_cols=38  Identities=18%  Similarity=0.113  Sum_probs=27.8

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      |.++++|.|.+  |++.|.+...|+.|++ +|...++|.|+
T Consensus         7 H~~~~~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2en8_A            7 GSGEKSHTCDE--CGKNFCYISALRIHQR-VHMGEKCSGPS   44 (46)
T ss_dssp             CCCCSSEECTT--TCCEESSHHHHHHHHT-TTCCSCSSCCS
T ss_pred             CCCCCCeECCC--cCcccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            56677788865  8888888888888874 67677777764

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.21  E-value=5.2e-07  Score=57.68  Aligned_cols=40  Identities=25%  Similarity=0.256  Sum_probs=32.8

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.++++|.|.+  |++.|.....|+.|++ .|...++|.|+.
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2eq3_A            6 SGTGEKPYECNQ--CGKAFSVRSSLTTHQA-IHTGKKPSGPSS   45 (46)
T ss_dssp             SSCCCCSSEETT--TTEECSSHHHHHHHHT-TSCCCCCCCSCC
T ss_pred             CCCCCCCeECCC--CChhhCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            367888999976  9999999999999985 788888888863

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.21  E-value=7.9e-07  Score=57.07  Aligned_cols=39  Identities=26%  Similarity=0.219  Sum_probs=31.3

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      .|.++++|.|.+  |++.|.....|+.|++ +|...++|.|.
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2eoh_A            6 SGSGKKPYECKE--CRKTFIQIGHLNQHKR-VHTGERSSGPS   44 (46)
T ss_dssp             SCCCSCSCCCSS--SCCCCSSHHHHHHHHH-HCSSCCSCSTT
T ss_pred             CcCCCCCcCCCC--cCchhCCHHHHHHHHH-HhCCCCCCCCC
Confidence            367788889966  9999999888888875 67778888774

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.21  E-value=5.6e-07  Score=57.67  Aligned_cols=33  Identities=24%  Similarity=0.301  Sum_probs=22.0

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|.+|++.|.+...|..|++          .|.+++||.|.+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~----------~H~~~~~~~C~~   45 (46)
T 2emg_A           13 FICSECGKVFTHKTNLIIHQK----------IHTGERPSGPSS   45 (46)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHT----------TTSCCCCSCSCC
T ss_pred             EECCccCcccCCHHHHHHHHH----------HhCCCCCCCCCC
Confidence            666666666666666666664          256778888865

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.21  E-value=8.1e-07  Score=57.01  Aligned_cols=40  Identities=28%  Similarity=0.255  Sum_probs=32.6

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.++++|.|.+  |++.|.....|+.|++ +|...++|.|+.
T Consensus         6 ~h~~~k~~~C~~--C~k~F~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2enh_A            6 SGTGEKPYECDV--CRKAFSHHASLTQHQR-VHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSCBCTT--TCCBCSSSHHHHHHGG-GSCCSCCCCCCC
T ss_pred             CcCCCCCcCCCC--cCchhCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            367788999966  9999999999999975 777888888863

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.20  E-value=8.2e-07  Score=56.88  Aligned_cols=39  Identities=18%  Similarity=0.190  Sum_probs=30.0

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      .|.++++|.|.+  |++.|.+...|..|++ .|...++|.|+
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2enc_A            6 SGSGEKPFKCEE--CGKGFYTNSQCYSHQR-SHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSEECSS--SCCEESSHHHHHHHHH-HSCCSSCCSSC
T ss_pred             CCCCCCCcCCCC--CCCcCCChHHHHHHHH-HhCCCCCCCCC
Confidence            366778888866  8888888888888874 67777777775

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.20  E-value=7.7e-07  Score=55.67  Aligned_cols=38  Identities=21%  Similarity=0.188  Sum_probs=32.2

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEF  165 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f  165 (253)
                      .|.++++|.|.+  |++.|.+...|+.|++ .|...++|.|
T Consensus         5 ~H~~~~~~~C~~--C~k~f~~~~~l~~H~~-~H~~~k~~~C   42 (42)
T 2epc_A            5 SSGGETPYLCGQ--CGKSFTQRGSLAVHQR-SCSQSGPSSG   42 (42)
T ss_dssp             CCCSSCCEECSS--SCCEESSHHHHHHHHH-HTTCCCCCCC
T ss_pred             cCCCCCCeECCC--CCcccCCHHHHHHHhh-hcCCCCCCCC
Confidence            467889999977  9999999999999985 7888888865

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.20  E-value=7.6e-07  Score=55.95  Aligned_cols=38  Identities=24%  Similarity=0.446  Sum_probs=31.7

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEF  165 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f  165 (253)
                      .|.++++|.|.+  |++.|.+...|+.|++ .|...++|.|
T Consensus         5 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C   42 (42)
T 2eos_A            5 SSGGEKPYPCEI--CGTRFRHLQTLKSHLR-IHTGSGPSSG   42 (42)
T ss_dssp             CCSSSCCBCCSS--SCCCBSSHHHHHHHTT-TTSCCSSTTC
T ss_pred             ccCCCCCEECCC--CCCccCCHHHHHHHHH-hcCCCCCCCC
Confidence            467889999976  9999999999999985 7777888765

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.20  E-value=6.9e-07  Score=57.10  Aligned_cols=33  Identities=18%  Similarity=0.263  Sum_probs=24.3

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|..|++.|.+...|..|++          .|.+++||.|.+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~----------~H~~~k~~~C~~   45 (46)
T 2ep1_A           13 YECSDCGKSFIKKSQLHVHQR----------IHTGENPSGPSS   45 (46)
T ss_dssp             SCCSSSCCCCSSHHHHHHHHG----------GGSSSCCCSSSC
T ss_pred             cCCCCCCchhCCHHHHHHHHH----------HhCCCCCCCCCC
Confidence            677777777777777777775          356788899865

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.20  E-value=8.7e-07  Score=56.86  Aligned_cols=39  Identities=18%  Similarity=0.158  Sum_probs=30.9

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      .|.++++|.|.+  |++.|.+...|..|++ .|...++|.|+
T Consensus         6 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2el6_A            6 SGAGVNPYKCSQ--CEKSFSGKLRLLVHQR-MHTREKPSGPS   44 (46)
T ss_dssp             SSCCCCSEECSS--SSCEESSHHHHHHHHG-GGCCSSCCSCC
T ss_pred             CCCCCCCeECCC--CCcccCCHHHHHHHHH-HcCCCCCCCCC
Confidence            467788888866  8888888888888874 67777888775

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.20  E-value=1.1e-06  Score=56.17  Aligned_cols=28  Identities=11%  Similarity=0.237  Sum_probs=14.7

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |++.|.+..+|..|++
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~   33 (46)
T 2ytf_A            6 SGTGEKPFECSE--CQKAFNTKSNLIVHQR   33 (46)
T ss_dssp             SSCCCCSEECSS--SCCEESSHHHHHHHHH
T ss_pred             CCCCCCCcCCCC--CCcccCCHHHHHHHHH
Confidence            345555555554  5555555555555543

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.20  E-value=6.1e-07  Score=57.50  Aligned_cols=33  Identities=18%  Similarity=0.296  Sum_probs=23.0

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|.+|++.|.+...|..|++          .|.+++||.|.+
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~----------~H~~~k~~~C~~   45 (46)
T 2yti_A           13 YKCNECGKVFTQNSHLARHRG----------IHTGEKPSGPSS   45 (46)
T ss_dssp             TCCSSSCCCCSSHHHHHHHHT----------TTSCSCCSSTTC
T ss_pred             eECCCCCcccCChhHHHHHhH----------hcCCCCCCCCCC
Confidence            666667777777777777765          356788888865

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.19  E-value=7.7e-07  Score=65.71  Aligned_cols=30  Identities=23%  Similarity=0.283  Sum_probs=26.2

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .++|++||.|.+++|+++|....+|..|++
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~r   50 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQ   50 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHH
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhh
Confidence            467899999988889999999999999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.19  E-value=6.3e-07  Score=57.41  Aligned_cols=33  Identities=18%  Similarity=0.275  Sum_probs=21.6

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|..|++.|.+...|..|++          .|.+++||.|.+
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~----------~H~~~k~~~C~~   45 (46)
T 2enf_A           13 YKCNECGKVFTQNSHLVRHRG----------IHTGEKPSGPSS   45 (46)
T ss_dssp             CBCSSSCCBCSSHHHHHHHHT----------TTTTSSCCCCSC
T ss_pred             eECCCCCcccCCHHHHHHHHH----------hhCCCCCCCCCC
Confidence            566666666666666666654          256778888865

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.19  E-value=9.7e-07  Score=56.63  Aligned_cols=33  Identities=18%  Similarity=0.182  Sum_probs=20.0

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|.+|++.|.+...|..|++          .|++++||.|.+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~----------~H~~~k~~~C~~   45 (46)
T 2em4_A           13 YECIECGKAFKTKSSLICHRR----------SHTGEKPSGPSS   45 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHH----------HHSSSSCCCCCC
T ss_pred             cCCCCCCCccCCHHHHHHHHH----------hcCCCCCCCCCC
Confidence            455555555555555555554          356788888865

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.19  E-value=4.9e-07  Score=58.07  Aligned_cols=40  Identities=23%  Similarity=0.244  Sum_probs=31.2

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.++++|.|.+  |++.|.....|..|++ +|...++|.|+.
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~~   45 (46)
T 2emz_A            6 SGSGERPFKCNE--CGKGFGRRSHLAGHLR-LHSREKSSGPSS   45 (46)
T ss_dssp             CSSCCCSCCCSS--SCCCCSSHHHHHHHHH-HHHHTTCCCSCC
T ss_pred             CCCCCCCeECCC--CCcccCCHHHHHHHHH-HhCCCCCCCCCC
Confidence            366788888866  8888888888888875 677778888764

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.19  E-value=1.3e-06  Score=55.85  Aligned_cols=30  Identities=13%  Similarity=0.273  Sum_probs=21.9

Q ss_pred             cccCCCcceEecCCCCCcccCChhHHHhhHhC
Q 025436           59 MVTEDGRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        59 ~~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      ..|+++++|.|.+  |++.|.....|..|+++
T Consensus         5 ~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~   34 (45)
T 2epu_A            5 SSGTGQKPFECTH--CGKSFRAKGNLVTHQRI   34 (45)
T ss_dssp             CCCCSCCSEEETT--TTEEESSHHHHHHHHTT
T ss_pred             CCCCCCcCccCCC--CCCccCChHHHHHHHHH
Confidence            3567777888877  77777777777777753

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.19  E-value=7.3e-07  Score=54.70  Aligned_cols=37  Identities=27%  Similarity=0.503  Sum_probs=31.1

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSF  163 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f  163 (253)
                      |+++++|.|.+++|++.|.....|+.|++ +|...++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKH-KHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHH-HHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHH-HhCCCCCC
Confidence            45789999986679999999999999985 67766665

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.19  E-value=1e-06  Score=56.63  Aligned_cols=33  Identities=27%  Similarity=0.315  Sum_probs=20.3

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|.+|++.|.+...|..|++          .|++++||.|.+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~----------~H~~~k~~~C~~   45 (46)
T 2eon_A           13 YKCQVCGKAFRVSSHLVQHHS----------VHSGERPSGPSS   45 (46)
T ss_dssp             CBCSSSCCBCSSHHHHHHHTT----------TTTSCCSCTTSC
T ss_pred             cCCCCCCcccCcHHHHHHHHH----------hcCCCCCCCCCC
Confidence            555555555555555555554          245778888865

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.19  E-value=5.2e-07  Score=57.69  Aligned_cols=33  Identities=15%  Similarity=0.190  Sum_probs=19.2

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|..|++.|.+...|..|++          .|.+++||.|.+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~----------~H~~~~p~~C~~   45 (46)
T 2yts_A           13 YICNECGKSFIQKSHLNRHRR----------IHTGEKPSGPSS   45 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHGG----------GTSSCCSSCCCC
T ss_pred             EECCCCChhhCChHHHHHHHH----------hcCCCCCcCCCC
Confidence            455555555555555555553          256778888865

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.18  E-value=4.9e-07  Score=57.95  Aligned_cols=39  Identities=21%  Similarity=0.215  Sum_probs=28.6

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      .|+++++|.|.+  |++.|.+...|+.|++ .|...++|.|+
T Consensus         6 ~H~~~~~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2en6_A            6 SGSGEKPYGCNE--CGKTFSQKSILSAHQR-THTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCEEETT--TTEEESSHHHHHHHHH-HHSSCCCSSSC
T ss_pred             ccCCCcCeECCC--CCcccCchHHHHHHHH-HcCCCCCCCCC
Confidence            356777888866  8888888888888875 56667777775

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.18  E-value=1.3e-06  Score=55.88  Aligned_cols=28  Identities=11%  Similarity=0.305  Sum_probs=15.4

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |++.|.+...|..|++
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~   33 (46)
T 2eml_A            6 SGTGEKPYECSV--CGKAFSHRQSLSVHQR   33 (46)
T ss_dssp             CCSSCCSEECSS--SCCEESSHHHHHHHHG
T ss_pred             CcCCCCCeeCCC--cCCccCCHHHHHHHHH
Confidence            355555555555  5555555555555553

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.18  E-value=4.7e-07  Score=57.92  Aligned_cols=33  Identities=18%  Similarity=0.291  Sum_probs=19.9

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|.+|++.|.+...|..|++          .|.+++||.|.+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~----------~H~~~k~~~C~~   45 (46)
T 2eow_A           13 YKCNECGKAFRARSSLAIHQA----------THSGEKPSGPSS   45 (46)
T ss_dssp             EECTTSCCEESSHHHHHHHHH----------HHCCCSCSCTTC
T ss_pred             eeccccCChhcCHHHHHHHHH----------HcCCCCCCCCCC
Confidence            455555555555555555554          356788888865

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.18  E-value=8.1e-07  Score=56.37  Aligned_cols=38  Identities=18%  Similarity=0.210  Sum_probs=31.8

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEF  165 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f  165 (253)
                      .|.+++||.|.+  |++.|.....|..|++ .|...++|.|
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C   43 (44)
T 2yu5_A            6 SGAGENPFKCSK--CDRVFTQRNYLVQHER-THARKSGPSS   43 (44)
T ss_dssp             CCSCCCSEECSS--SSCEESSSHHHHHHHH-HCCCCCSSCC
T ss_pred             ccCCCCCeECCC--CCchhCCHHHHHHHhH-hcCCCCCCCC
Confidence            367888999977  9999999999999985 6777888876

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.18  E-value=6.4e-07  Score=57.63  Aligned_cols=35  Identities=11%  Similarity=0.140  Sum_probs=31.5

Q ss_pred             cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCcccc
Q 025436           93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGC  139 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC  139 (253)
                      .|.|.+|++.|.+...|..|++          .|.+++||.|.+  |
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~----------~H~~~~~~~C~~--C   46 (46)
T 2ytm_A           12 PYKCMECGKAFGDNSSCTQHQR----------LHTGQRPSGPSS--G   46 (46)
T ss_dssp             SSSBTTTTBCCSSHHHHHHHHH----------HHHSCCCCCCCC--C
T ss_pred             CcCCCCCCchhCCHHHHHHHHH----------HcCCCCCCCCCC--C
Confidence            4999999999999999999997          367899999976  7

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.18  E-value=1.3e-06  Score=55.85  Aligned_cols=28  Identities=14%  Similarity=0.234  Sum_probs=16.9

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|++  |++.|.+...|..|++
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~   33 (46)
T 2ene_A            6 SGTGEKPYKCNE--CGKVFRHNSYLSRHQR   33 (46)
T ss_dssp             SCCCSSSEECSS--SCCEESSHHHHHHHHT
T ss_pred             CCCCCCCeECCC--CCchhCChHHHHHHHh
Confidence            455666666655  6666666666666654

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.18  E-value=6.8e-07  Score=57.27  Aligned_cols=38  Identities=18%  Similarity=0.208  Sum_probs=28.2

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      |.++++|.|.+  |++.|.+...|+.|++ .|...++|.|+
T Consensus         7 h~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2ysp_A            7 GTGEKPYKCEK--CGKGYNSKFNLDMHQK-VHTGERPSGPS   44 (46)
T ss_dssp             CSSCCSEEETT--TTEEESCHHHHHHHHT-TSCSCCSSCCS
T ss_pred             CCCCCCeECCC--CCCccCCHHHHHHHHH-hhCCCCCCCCC
Confidence            56777888855  8888888888888874 67777777765

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.18  E-value=1.4e-06  Score=55.85  Aligned_cols=28  Identities=14%  Similarity=0.337  Sum_probs=16.0

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |++.|.+...|..|++
T Consensus         6 ~H~~~k~~~C~~--C~k~F~~~~~L~~H~~   33 (46)
T 2emf_A            6 SGTGGKHFECTE--CGKAFTRKSTLSMHQK   33 (46)
T ss_dssp             SSSSSCCEECSS--SCCEESCHHHHHHHGG
T ss_pred             ccCCCCCeECCC--CCchhCCHHHHHHHHH
Confidence            355556666655  5555555555555554

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.17  E-value=1.1e-06  Score=56.52  Aligned_cols=41  Identities=20%  Similarity=0.295  Sum_probs=34.0

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      .|+++++|.|.++.|++.|.....|..|++ .|...++|.|+
T Consensus         6 ~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~k~~~C~   46 (48)
T 2ent_A            6 SGTGEKPFACTWPGCGWRFSRSDELSRHRR-SHSGVKPSGPS   46 (48)
T ss_dssp             SSCCCCCEECCSSSCCCEESSHHHHHHHHT-TSCCCCSCSSC
T ss_pred             CcCCCCCeECCCCCCCCccCCHHHHHHHHH-HhCCCCCCCCC
Confidence            467889999974459999999999999985 78888888885

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.17  E-value=1.1e-06  Score=56.29  Aligned_cols=33  Identities=15%  Similarity=0.260  Sum_probs=18.3

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|.+|++.|.+...|..|++          .|.+++||.|.+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~----------~H~~~k~~~C~~   45 (46)
T 2em2_A           13 FKCKECGKAFRQNIHLASHLR----------IHTGEKPSGPSS   45 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHH----------HHCCCCSSCSSC
T ss_pred             EECCcCCchhCCHHHHHHHHH----------HhCCCCCCCCCC
Confidence            444444445555555555543          256677888865

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.17  E-value=1.3e-06  Score=55.77  Aligned_cols=28  Identities=11%  Similarity=0.245  Sum_probs=15.5

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |++.|.+...|..|++
T Consensus         6 ~H~~~~~~~C~~--C~k~F~~~~~L~~H~~   33 (46)
T 2eoe_A            6 SGTGEKPYKCNE--CGKVFTQNSHLANHQR   33 (46)
T ss_dssp             CCCCCCSSEETT--TTEECSSHHHHHHHHG
T ss_pred             CCCCCCCeECCC--cChhhCCHHHHHHHHH
Confidence            345555555555  5555555555555553

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.17  E-value=7.8e-07  Score=57.11  Aligned_cols=33  Identities=18%  Similarity=0.323  Sum_probs=23.2

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|.+|++.|.+...|..|++          .|.+++||.|.+
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~----------~H~~~k~~~C~~   45 (46)
T 2en9_A           13 FKCNECKKTFTQSSSLTVHQR----------IHTGEKPSGPSS   45 (46)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHH----------HHTSSCCCSCCC
T ss_pred             EECCccCcccCCHHHHHHHHH----------HcCCCCCCCCCC
Confidence            666666666666666777765          356788899865

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.17  E-value=1.4e-06  Score=55.57  Aligned_cols=27  Identities=11%  Similarity=0.187  Sum_probs=14.3

Q ss_pred             cCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           61 TEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        61 h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      |+++++|.|.+  |++.|.+...|..|++
T Consensus         7 H~~~k~~~C~~--C~k~f~~~~~L~~H~~   33 (46)
T 2el4_A            7 GTGVKPYGCSQ--CAKTFSLKSQLIVHQR   33 (46)
T ss_dssp             SCCCCSEECSS--SSCEESSHHHHHHHGG
T ss_pred             CCCCCceECCC--CCchhCCHHHHHHHHH
Confidence            45555555554  5555555555555543

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.17  E-value=5e-07  Score=57.77  Aligned_cols=33  Identities=15%  Similarity=0.220  Sum_probs=20.6

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|.+|++.|.+...|..|++          .|.+++||.|.+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~----------~H~~~kp~~C~~   45 (46)
T 2eor_A           13 YNCEECGKAFIHDSQLQEHQR----------IHTGEKPSGPSS   45 (46)
T ss_dssp             EECTTTCCEESSHHHHHHHHH----------HHHSCCCSSSTT
T ss_pred             ccCCCCCCCcCCHHHHHHHHH----------hcCCCCCCCCCC
Confidence            555555555555555555554          356788888875

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.17  E-value=1.4e-06  Score=55.73  Aligned_cols=28  Identities=14%  Similarity=0.227  Sum_probs=16.5

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |++.|.+...|..|++
T Consensus         6 ~H~~~k~~~C~~--C~k~F~~~~~L~~H~~   33 (46)
T 2eq0_A            6 SGTGEKPYKCHE--CGKVFRRNSHLARHQL   33 (46)
T ss_dssp             CTTCCCCEECTT--TCCEESSHHHHHHHHT
T ss_pred             CCCCCCCeECCC--CCchhCCHHHHHHHHH
Confidence            355566666655  6666666666666654

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.17  E-value=1.5e-06  Score=55.74  Aligned_cols=28  Identities=11%  Similarity=0.238  Sum_probs=15.9

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |++.|.+...|..|++
T Consensus         6 ~H~~~~~~~C~~--C~k~f~~~~~L~~H~~   33 (46)
T 2em5_A            6 SGSSTKSHQCHE--CGRGFTLKSHLNQHQR   33 (46)
T ss_dssp             CCCCSCSEECSS--SCCEESSHHHHHHHHT
T ss_pred             CCCCCCCeECCc--CCCccCCHHHHHHHHH
Confidence            355555666655  5555555555555554

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.17  E-value=1.6e-06  Score=55.54  Aligned_cols=29  Identities=14%  Similarity=0.214  Sum_probs=19.9

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhC
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      .|+++++|.|++  |++.|.+...|..|+++
T Consensus         6 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~   34 (46)
T 2ysp_A            6 SGTGEKPYKCEK--CGKGYNSKFNLDMHQKV   34 (46)
T ss_dssp             CCSSCCSEEETT--TTEEESCHHHHHHHHTT
T ss_pred             CCCCCCCeECCC--CCCccCCHHHHHHHHHh
Confidence            466677777766  77777777777777653

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.16  E-value=9.6e-07  Score=56.53  Aligned_cols=39  Identities=23%  Similarity=0.170  Sum_probs=34.7

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      .|.++++|.|.+  |++.|.....|+.|++ .|...++|.|.
T Consensus         6 ~H~~~~~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2yso_A            6 SGSREKSHQCRE--CGEIFFQYVSLIEHQV-LHMGQKNSGPS   44 (46)
T ss_dssp             CSSCCCCEECTT--TCCEESSHHHHHHHHH-HHSCCSCCCTT
T ss_pred             ccCCCCCEEccc--cChhhCCHHHHHHHHH-HhCCCCCCCCC
Confidence            467899999977  9999999999999985 78888999885

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.16  E-value=8.1e-07  Score=57.01  Aligned_cols=33  Identities=24%  Similarity=0.320  Sum_probs=21.9

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|.+|++.|.+...|..|++          .|++++||.|.+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~----------~H~~~k~~~C~~   45 (46)
T 2em6_A           13 YKCDVCGKEFSQSSHLQTHQR----------VHTGEKPSGPSS   45 (46)
T ss_dssp             CBCSSSCCBCSSHHHHHHHHT----------TTSSSCCCCTTC
T ss_pred             eECCCCCcccCCHHHHHHHHH----------HcCCCCCCCCCC
Confidence            666666666666666666654          356788888865

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.16  E-value=6e-07  Score=56.32  Aligned_cols=38  Identities=21%  Similarity=0.361  Sum_probs=31.8

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEF  165 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f  165 (253)
                      .|+++++|.|.+  |++.|.+...|..|++ .|...++|.|
T Consensus         5 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C   42 (42)
T 2en2_A            5 SSGGEKPYKCET--CGARFVQVAHLRAHVL-IHTGSGPSSG   42 (42)
T ss_dssp             CCCSSCSEECTT--TCCEESSHHHHHHHTH-HHHSCCSSCC
T ss_pred             ccCCCCCEeCCC--cChhhCCHHHHHHHHH-HcCCCCCCCC
Confidence            467889999966  9999999999999985 7777888765

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.16  E-value=1.5e-06  Score=55.67  Aligned_cols=28  Identities=11%  Similarity=0.179  Sum_probs=15.4

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |++.|.+...|..|++
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~   33 (46)
T 2em7_A            6 SGTGEKPYKCEE--CGKGFICRRDLYTHHM   33 (46)
T ss_dssp             SSSCCCSEECSS--SCCEESCHHHHHHHGG
T ss_pred             CCCCCcCccCCC--ccchhCCHHHHHHHHH
Confidence            345555555555  5555555555555553

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.16  E-value=1e-06  Score=56.38  Aligned_cols=39  Identities=23%  Similarity=0.191  Sum_probs=31.0

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      .|.++++|.|.+  |++.|.+...|+.|++ .|...++|.|+
T Consensus         6 ~h~~~~~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2ep0_A            6 SGTGEKPYKCDV--CHKSFRYGSSLTVHQR-IHTGEKPSGPS   44 (46)
T ss_dssp             SSTTCCSEECSS--SCCEESSHHHHHHHHT-TTSSSCCCSCC
T ss_pred             CCCCCCCeeCcc--cCcccCChHHHHHHHH-HhCCCCCCCCC
Confidence            366788888866  8888888888888874 67777888775

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.16  E-value=8.8e-08  Score=66.38  Aligned_cols=24  Identities=21%  Similarity=0.553  Sum_probs=15.1

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHH
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFE   85 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~   85 (253)
                      .|++++||.|+.  |+++|.....|.
T Consensus         8 ~H~~~k~~~C~~--C~k~F~~~~~l~   31 (62)
T 1vd4_A            8 DSTNRASFKCPV--CSSTFTDLEANQ   31 (62)
T ss_dssp             SCCSSSEEECSS--SCCEEEHHHHHH
T ss_pred             HcCCCCCccCCC--CCchhccHHHhH
Confidence            466666676665  666666655554

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.16  E-value=1.5e-06  Score=55.72  Aligned_cols=28  Identities=14%  Similarity=0.217  Sum_probs=14.7

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |++.|.....|..|++
T Consensus         6 ~H~~~k~~~C~~--C~k~F~~~~~L~~H~~   33 (46)
T 2ytp_A            6 SGTGERHYECSE--CGKAFARKSTLIMHQR   33 (46)
T ss_dssp             SSCCCCCEECSS--SCCEESSHHHHHHHHT
T ss_pred             CcCCCCCeECCc--CCcccCCHHHHHHHHH
Confidence            345555555554  5555555555555543

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.16  E-value=6.1e-07  Score=57.47  Aligned_cols=33  Identities=18%  Similarity=0.294  Sum_probs=20.4

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|.+|++.|.+...|..|++          .|.+++||.|.+
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~----------~H~~~~~~~C~~   45 (46)
T 2em3_A           13 YECKVCSKAFTQKAHLAQHQK----------THTGEKPSGPSS   45 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHH----------HHCCCCCCCSCC
T ss_pred             eECCCCCcccCCHHHHHHHHH----------HhCCCCCCCCCC
Confidence            555555555555555555554          356788888865

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.16  E-value=1.6e-06  Score=55.33  Aligned_cols=33  Identities=15%  Similarity=0.242  Sum_probs=17.7

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|..|++.|.+...|..|++          .|.+++||.|.+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~----------~H~~~k~~~C~~   45 (46)
T 2yrj_A           13 YRCGECGKAFAQKANLTQHQR----------IHTGEKPSGPSS   45 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHT----------TTSSCCSSCSCC
T ss_pred             eECCCCCCccCCHHHHHHHHH----------HcCCCCCCCCCC
Confidence            444444444444444444443          245677788764

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.16  E-value=1.6e-06  Score=55.42  Aligned_cols=28  Identities=14%  Similarity=0.332  Sum_probs=15.6

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|++  |++.|.+...|..|++
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~   33 (46)
T 2ep2_A            6 SGTGEKPYECSI--CGKSFTKKSQLHVHQQ   33 (46)
T ss_dssp             CSSCCCSEECSS--SCCEESSHHHHHHHHH
T ss_pred             CCCCCcCcCCCC--CCcccCCHHHHHHHHH
Confidence            345555555555  5555555555555554

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.16  E-value=1e-06  Score=55.99  Aligned_cols=39  Identities=18%  Similarity=0.152  Sum_probs=30.9

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      .|.++++|.|.+  |++.|.....|..|++ .|...++|.|+
T Consensus         6 ~h~~~~~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (44)
T 2eou_A            6 SGAAKTTSECQE--CGKIFRHSSLLIEHQA-LHAGESGPSSG   44 (44)
T ss_dssp             SCSSSCCCCCTT--TCCCCSSHHHHHHHHH-HHTTSCCCCCC
T ss_pred             CCCCCcCeECCC--CCcccCCHHHHHHHHH-HHCCCCCCCCC
Confidence            366788888866  8888888888888875 67777888774

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.16  E-value=1.6e-06  Score=55.40  Aligned_cols=28  Identities=14%  Similarity=0.281  Sum_probs=14.9

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|++  |++.|.+...|..|++
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~   33 (46)
T 2eme_A            6 SGSGEKPYVCDY--CGKAFGLSAELVRHQR   33 (46)
T ss_dssp             TTCCCCSEECSS--SCCEESSHHHHHHHHG
T ss_pred             CCCCCCCeECCC--CChhhCCHHHHHHHHH
Confidence            345555555554  5555555555555553

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.15  E-value=9.3e-07  Score=56.73  Aligned_cols=33  Identities=18%  Similarity=0.230  Sum_probs=22.9

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|.+|++.|.+...|..|++          .|++++||.|.+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~----------~H~~~k~~~C~~   45 (46)
T 2yth_A           13 FQCEECGKRFTQNSHLHSHQR----------VHTGEKPSGPSS   45 (46)
T ss_dssp             BCCSSSCCCBSSHHHHHHHGG----------GGTTCCCSSCCC
T ss_pred             CCCCCCCcccCCHHHHHHHHH----------hcCCCCCCCCCC
Confidence            666666666666666777765          356788888864

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.15  E-value=1.5e-06  Score=55.43  Aligned_cols=28  Identities=14%  Similarity=0.226  Sum_probs=15.5

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |++.|.+...|..|++
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~   33 (46)
T 2em9_A            6 SGTGEKPYNCKE--CGKSFRWASCLLKHQR   33 (46)
T ss_dssp             SCCCCCSEECSS--SCCEESSHHHHHHHGG
T ss_pred             CCCCCcCeECCc--cccccCChHHHHHHHH
Confidence            355555565555  5555555555555553

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.15  E-value=8.2e-07  Score=56.86  Aligned_cols=33  Identities=15%  Similarity=0.250  Sum_probs=21.8

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|..|++.|.+...|..|++          .|.+++||.|.+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~----------~H~~~k~~~C~~   45 (46)
T 2eq1_A           13 YKCNECGKAFRAHSNLTTHQV----------IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCTTTTCCCSSHHHHHHHHT----------TTCCSCCSSCCC
T ss_pred             eECCcCChhhCCHHHHHHHHH----------HhCCCCCCCCCC
Confidence            666666666666666666664          256778888864

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.15  E-value=1.6e-06  Score=55.61  Aligned_cols=33  Identities=21%  Similarity=0.343  Sum_probs=17.6

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|.+|++.|.+...|..|++          .|.+++||.|.+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~----------~H~~~k~~~C~~   45 (46)
T 2ytq_A           13 YGCSECGKAFSSKSYLIIHMR----------THSGEKPSGPSS   45 (46)
T ss_dssp             CBCSSSCCBCSCHHHHHHHHT----------TTCCSCSSCCCC
T ss_pred             cCCCccChhhCChHHHHHHHH----------HhCCCCCCCCCC
Confidence            444445555555555555543          245666777755

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.15  E-value=1.2e-06  Score=55.54  Aligned_cols=28  Identities=14%  Similarity=0.241  Sum_probs=16.2

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |++.|.+...|..|++
T Consensus         4 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~   31 (44)
T 2emx_A            4 GSSGEKPFGCSC--CEKAFSSKSYLLVHQQ   31 (44)
T ss_dssp             CCSSCCCEECSS--SSCEESSHHHHHHHHH
T ss_pred             CcCCCcCccCCC--CCcccCCHHHHHHHHH
Confidence            355556666655  6666666555555553

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.14  E-value=1.3e-06  Score=56.04  Aligned_cols=33  Identities=18%  Similarity=0.284  Sum_probs=19.2

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|.+|++.|.+...|..|++          .|++++||.|.+
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~----------~H~~~k~~~C~~   45 (46)
T 2emj_A           13 FECAECGKSFSISSQLATHQR----------IHTGEKPSGPSS   45 (46)
T ss_dssp             EECSSSSCEESSHHHHHHHHH----------HHTTSCSSSSCC
T ss_pred             EECCCCCcccCCHHHHHHHHH----------HhCCCCCCCCCC
Confidence            445555555555555555553          256778888865

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.14  E-value=1.3e-06  Score=56.07  Aligned_cols=33  Identities=21%  Similarity=0.348  Sum_probs=29.0

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      +++++||.|.+++|++.|.....|++|++ +|..
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r-~Htg   36 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLK-VHTA   36 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHH-HHSC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHH-hcCC
Confidence            57899999988889999999999999986 6653

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.14  E-value=1.9e-06  Score=55.14  Aligned_cols=29  Identities=14%  Similarity=0.280  Sum_probs=19.8

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhC
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      .|+++++|.|.+  |++.|.+...|..|+++
T Consensus         6 ~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~   34 (46)
T 2ep0_A            6 SGTGEKPYKCDV--CHKSFRYGSSLTVHQRI   34 (46)
T ss_dssp             SSTTCCSEECSS--SCCEESSHHHHHHHHTT
T ss_pred             CCCCCCCeeCcc--cCcccCChHHHHHHHHH
Confidence            466677777766  77777777777777643

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.14  E-value=1.7e-06  Score=55.31  Aligned_cols=28  Identities=14%  Similarity=0.347  Sum_probs=17.0

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |++.|.+...|..|++
T Consensus         6 ~H~~~~~~~C~~--C~k~f~~~~~L~~H~~   33 (46)
T 2en1_A            6 SGSGEKPFKCEE--CGKRFTQNSQLHSHQR   33 (46)
T ss_dssp             CCCCCCSEEETT--TTEEESSHHHHHHHGG
T ss_pred             CCCCCCCeeCCC--CCcccCCHHHHHHHHH
Confidence            455666666655  6666666666666654

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.14  E-value=1.3e-06  Score=55.76  Aligned_cols=28  Identities=14%  Similarity=0.214  Sum_probs=15.2

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |++.|.+...|..|++
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~   33 (46)
T 2emm_A            6 SGTGERPHKCNE--CGKSFIQSAHLIQHQR   33 (46)
T ss_dssp             CSSCCCSEECSS--SCCEESSHHHHHHHHH
T ss_pred             CcCCCCCeeCCC--CChhhCCHHHHHHHHH
Confidence            345555555554  5555555555555543

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.13  E-value=1.6e-06  Score=55.52  Aligned_cols=27  Identities=11%  Similarity=0.262  Sum_probs=14.3

Q ss_pred             cCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           61 TEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        61 h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      |+++++|.|.+  |++.|.+...|..|++
T Consensus         7 H~~~k~~~C~~--C~k~f~~~~~L~~H~~   33 (46)
T 2ytj_A            7 GTGEKPYICAE--CGKAFTIRSNLIKHQK   33 (46)
T ss_dssp             TSSCCSEECSS--SCCEESSHHHHHHHHH
T ss_pred             CCCCcCeECCC--CChhhCCHHHHHHHHH
Confidence            45555555554  5555555555555543

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.13  E-value=1.6e-06  Score=55.53  Aligned_cols=28  Identities=11%  Similarity=0.205  Sum_probs=16.8

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |++.|.+...|..|++
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~   33 (46)
T 2enc_A            6 SGSGEKPFKCEE--CGKGFYTNSQCYSHQR   33 (46)
T ss_dssp             CCCCCCSEECSS--SCCEESSHHHHHHHHH
T ss_pred             CCCCCCCcCCCC--CCCcCCChHHHHHHHH
Confidence            455666666655  6666666666666654

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.13  E-value=1.8e-06  Score=55.29  Aligned_cols=28  Identities=11%  Similarity=0.124  Sum_probs=17.0

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |++.|.+...|..|++
T Consensus         6 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~   33 (46)
T 2el6_A            6 SGAGVNPYKCSQ--CEKSFSGKLRLLVHQR   33 (46)
T ss_dssp             SSCCCCSEECSS--SSCEESSHHHHHHHHG
T ss_pred             CCCCCCCeECCC--CCcccCCHHHHHHHHH
Confidence            455666666655  6666666666666654

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.13  E-value=1e-06  Score=56.58  Aligned_cols=39  Identities=21%  Similarity=0.221  Sum_probs=29.1

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      .|.++++|.|.+  |++.|.+...|+.|++ .|...++|.|+
T Consensus         6 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2em8_A            6 SGSGEKPYKCVE--CGKGYKRRLDLDFHQR-VHTGEKLSGPS   44 (46)
T ss_dssp             CCCSCCSEECSS--SCCEESSHHHHHHHHH-HHHCCCCCCSC
T ss_pred             CCCCCCCeECcc--cCchhCCHHHHHHHHH-HHcCCCCCCCC
Confidence            356777888866  8888888888888875 56677777775

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.13  E-value=1.9e-06  Score=54.99  Aligned_cols=28  Identities=11%  Similarity=0.252  Sum_probs=15.9

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |++.|.+...|..|++
T Consensus         6 ~H~~~~~~~C~~--C~k~f~~~~~L~~H~~   33 (46)
T 2en8_A            6 SGSGEKSHTCDE--CGKNFCYISALRIHQR   33 (46)
T ss_dssp             CCCCCSSEECTT--TCCEESSHHHHHHHHT
T ss_pred             cCCCCCCeECCC--cCcccCCHHHHHHHHH
Confidence            355556666655  5555555555555553

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.13  E-value=1.7e-06  Score=55.35  Aligned_cols=27  Identities=11%  Similarity=0.230  Sum_probs=13.6

Q ss_pred             cCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           61 TEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        61 h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      |+++++|.|.+  |++.|.....|..|++
T Consensus         7 H~~~k~~~C~~--C~k~F~~~~~L~~H~~   33 (47)
T 2epx_A            7 GTGKKPYECIE--CGKAFIQNTSLIRHWR   33 (47)
T ss_dssp             CCCCCSBCCSS--SCCCBSSHHHHHHHHT
T ss_pred             cCCCCCEECCc--cCchhCChHHHHHHhH
Confidence            44455555544  5555555555555543

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.13  E-value=5.3e-07  Score=57.24  Aligned_cols=38  Identities=18%  Similarity=0.241  Sum_probs=31.2

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEF  165 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f  165 (253)
                      .|+++++|.|.+  |++.|.+...|..|++ .|...++|.|
T Consensus         6 ~H~~~~~~~C~~--C~k~F~~~~~L~~H~~-~H~~~~~~~C   43 (44)
T 2eox_A            6 SGTDSKSYNCNE--CGKAFTRIFHLTRHQK-IHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCEEETT--TTEEESSSHHHHTTHH-HHCCCCCCSC
T ss_pred             CCCCCCCeECcc--cCcccCCHHHHHHHHH-HhCCCCCCCC
Confidence            367788999966  9999999999999985 6777888876

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.13  E-value=1.5e-06  Score=55.45  Aligned_cols=26  Identities=12%  Similarity=0.174  Sum_probs=13.2

Q ss_pred             cCCCcceEecCCCCCcccCChhHHHhhH
Q 025436           61 TEDGRRVCCPIVGCNARMRSLEEFEDHY   88 (253)
Q Consensus        61 h~~~k~f~C~~~gC~k~F~s~~~L~~H~   88 (253)
                      |+++++|.|.+  |++.|.+...|..|+
T Consensus         7 H~~~k~~~C~~--C~k~F~~~~~L~~H~   32 (46)
T 2epw_A            7 GTGEKPCKCTE--CGKAFCWKSQLIMHQ   32 (46)
T ss_dssp             CCCCCSEECSS--SCCEESSSHHHHHHH
T ss_pred             CCCCCCeeCCC--CCCccCCHHHHHHHH
Confidence            44555555544  555555555555554

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.13  E-value=2.1e-06  Score=54.92  Aligned_cols=33  Identities=24%  Similarity=0.357  Sum_probs=18.0

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|.+|++.|.+...|..|++          .|.++++|.|.+
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~----------~H~~~k~~~C~~   45 (46)
T 2emi_A           13 YECSECGKAFIQKSTLSMHQR----------IHRGEKPSGPSS   45 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHG----------GGCSCCCCSCCC
T ss_pred             CCCCCCCcccCCHHHHHHHHh----------HhCCCCCCCCCC
Confidence            444444444444444445543          245677888854

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.12  E-value=2.1e-06  Score=53.71  Aligned_cols=28  Identities=11%  Similarity=0.258  Sum_probs=16.4

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |++.|.+...|..|++
T Consensus         4 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~   31 (42)
T 2el5_A            4 GSSGENPYECSE--CGKAFNRKDQLISHQR   31 (42)
T ss_dssp             SSSSCCSEECSS--SCCEESSHHHHHHHHG
T ss_pred             CCCCCCCccCCC--cChhhCCHHHHHHHHH
Confidence            355566666655  6666666666655553

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.12  E-value=2.4e-06  Score=54.88  Aligned_cols=32  Identities=19%  Similarity=0.403  Sum_probs=23.7

Q ss_pred             cccCCCcceEecCCCCCcccCChhHHHhhHhC
Q 025436           59 MVTEDGRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        59 ~~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      ..|+++++|.|.++.|++.|.....|..|+++
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~   36 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRS   36 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTT
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHH
Confidence            35778888888744488888888888888754

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.12  E-value=1.5e-06  Score=55.60  Aligned_cols=28  Identities=11%  Similarity=0.226  Sum_probs=17.4

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |++.|.+...|..|++
T Consensus         6 ~H~~~~~~~C~~--C~k~f~~~~~L~~H~~   33 (46)
T 2en6_A            6 SGSGEKPYGCNE--CGKTFSQKSILSAHQR   33 (46)
T ss_dssp             CCCSSCCEEETT--TTEEESSHHHHHHHHH
T ss_pred             ccCCCcCeECCC--CCcccCchHHHHHHHH
Confidence            456666666655  6666666666666654

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.11  E-value=8.1e-07  Score=57.03  Aligned_cols=39  Identities=23%  Similarity=0.334  Sum_probs=26.7

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      .|.++++|.|.+  |++.|.+...|+.|++ .|...++|.|+
T Consensus         6 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~C~   44 (46)
T 2ytt_A            6 SGEGEKPYQCSE--CGKSFSGSYRLTQHWI-THTREKPSGPS   44 (46)
T ss_dssp             SCSCCCTTCCSS--SCCCCSSHHHHHHHHT-HHHHCCCCSCC
T ss_pred             CCCCCCCeeCCC--CCcccCCHHHHHHHHH-HcCCCCCCCCC
Confidence            356677777755  7777777777777764 56666667664

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.11  E-value=1.9e-06  Score=53.75  Aligned_cols=28  Identities=18%  Similarity=0.255  Sum_probs=19.8

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |++.|.....|..|++
T Consensus         4 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~   31 (41)
T 2ept_A            4 GSSGQRVYECQE--CGKSFRQKGSLTLHER   31 (41)
T ss_dssp             SCCCCCCEECSS--SCCEESSHHHHHHHGG
T ss_pred             ccCCCCCeECCC--CCCCcCCHHHHHHHHH
Confidence            566777777766  7777777777777764

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.10  E-value=1.7e-06  Score=55.10  Aligned_cols=38  Identities=24%  Similarity=0.184  Sum_probs=32.3

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEF  165 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f  165 (253)
                      .|.++++|.|.+  |++.|.....|+.|++ +|...++|.+
T Consensus         6 ~H~~~k~~~C~~--C~k~F~~~~~L~~H~~-~H~~~k~~~~   43 (44)
T 2epv_A            6 SGSGEKPYECNE--CGKAFIWKSLLIVHER-THAGVSGPSS   43 (44)
T ss_dssp             CCCCCCSEECSS--SCCEESSHHHHHHHHG-GGSSCSCCCC
T ss_pred             ccCCCcCeECCC--CCcccCchHHHHHHHh-HhcCCCCCCC
Confidence            467889999977  9999999999999985 7888888765

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.09  E-value=7.8e-07  Score=56.98  Aligned_cols=39  Identities=23%  Similarity=0.312  Sum_probs=31.0

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      .|.++++|.|.+  |++.|.....|..|++ .|...++|.|.
T Consensus         6 ~H~~~k~~~C~~--C~k~F~~~~~L~~H~~-~H~~~~~~~C~   44 (46)
T 2en3_A            6 SGTGEKPFQCKE--CGMNFSWSCSLFKHLR-SHERTDPSGPS   44 (46)
T ss_dssp             CSCCCCSEECSS--SCCEESSSHHHHHHHH-HHHHSCCSSCS
T ss_pred             ccCCCCCeeCcc--cChhhCCHHHHHHHHH-HhCCCCCCCCC
Confidence            366788899966  9999999999999985 67777777774

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.09  E-value=1.3e-06  Score=54.59  Aligned_cols=31  Identities=19%  Similarity=0.394  Sum_probs=18.8

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceec
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYEC  134 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C  134 (253)
                      |.|.+|+++|.+...|..|+.          .|.+++||.|
T Consensus        12 ~~C~~C~k~f~~~~~L~~H~~----------~H~~~~~~~C   42 (42)
T 2ytb_A           12 YRCDQCGKAFSQKGSLIVHIR----------VHTGSGPSSG   42 (42)
T ss_dssp             BCCTTTTCCBSSHHHHHTTGG----------GTSCCSCCCC
T ss_pred             eeCCCccchhCCHHHHHHHHH----------HhCCCCCCCC
Confidence            555556666666666666654          2456777776

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.08  E-value=2.9e-06  Score=54.24  Aligned_cols=28  Identities=11%  Similarity=0.235  Sum_probs=15.5

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |++.|.+...|..|++
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~   33 (46)
T 2ep3_A            6 SGTGEKPYRCAE--CGKAFTDRSNLFTHQK   33 (46)
T ss_dssp             SSSCCCSEECSS--SCCEESSHHHHHHHHT
T ss_pred             CCCCCCCeECCC--CCchhCCHHHHHHHHH
Confidence            355555555555  5555555555555553

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.08  E-value=2.2e-06  Score=54.91  Aligned_cols=28  Identities=11%  Similarity=0.339  Sum_probs=15.5

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |++.|.....|..|++
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~   33 (46)
T 2eoz_A            6 SGTGEKPYSCNV--CGKAFVLSAHLNQHLR   33 (46)
T ss_dssp             CCSSCCSEEETT--TTEEESSHHHHHHHHH
T ss_pred             cCCCCCCeECcc--cChhhCCHHHHHHHHH
Confidence            355555666655  5555555555555553

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.07  E-value=1.3e-06  Score=56.09  Aligned_cols=27  Identities=15%  Similarity=0.370  Sum_probs=13.9

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhH
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHY   88 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~   88 (253)
                      .|+++++|.|.+  |++.|.+...|..|+
T Consensus         6 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~   32 (46)
T 2ytt_A            6 SGEGEKPYQCSE--CGKSFSGSYRLTQHW   32 (46)
T ss_dssp             SCSCCCTTCCSS--SCCCCSSHHHHHHHH
T ss_pred             CCCCCCCeeCCC--CCcccCCHHHHHHHH
Confidence            345555555544  555555555555554

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.07  E-value=6.8e-07  Score=61.81  Aligned_cols=54  Identities=13%  Similarity=0.273  Sum_probs=41.6

Q ss_pred             HHhhHhCcC---cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhH
Q 025436           84 FEDHYNARH---TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQH  152 (253)
Q Consensus        84 L~~H~~~~H---~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~H  152 (253)
                      |+.|++++.   .|.|..|+++|.+...|.   .          .|.+++||.|.+  |++.|....++..|
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~----------~H~~~k~~~C~~--C~k~f~~~~~~~~~   58 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---L----------FDPMTGTFRCTF--CHTEVEEDESAMPK   58 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---H----------EETTTTEEBCSS--SCCBCEECTTCSCC
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---h----------hcCCCCCEECCC--CCCccccCcccccc
Confidence            456776422   399999999999987775   2          367899999977  99999987766543

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.07  E-value=2.8e-06  Score=54.15  Aligned_cols=28  Identities=11%  Similarity=0.227  Sum_probs=15.4

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |++.|.....|..|++
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~   33 (46)
T 2eq3_A            6 SGTGEKPYECNQ--CGKAFSVRSSLTTHQA   33 (46)
T ss_dssp             SSCCCCSSEETT--TTEECSSHHHHHHHHT
T ss_pred             CCCCCCCeECCC--CChhhCCHHHHHHHHH
Confidence            345555555555  5555555555555553

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.07  E-value=1.5e-06  Score=54.89  Aligned_cols=31  Identities=19%  Similarity=0.369  Sum_probs=19.1

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceec
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYEC  134 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C  134 (253)
                      |.|.+|++.|.+...|..|++          .|.+++||.|
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~----------~H~~~~~~~C   43 (44)
T 2en7_A           13 YVCNECGKAFRSKSYLIIHTR----------THTGESGPSS   43 (44)
T ss_dssp             SCCTTTCCCCSSHHHHHHHHT----------TTCCSSSSCC
T ss_pred             eECCCCCCccCCHHHHHHHhh----------hcCCCCCCCC
Confidence            555566666666666666654          2456777777

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.06  E-value=5.2e-07  Score=60.25  Aligned_cols=49  Identities=20%  Similarity=0.223  Sum_probs=37.3

Q ss_pred             CcccCChhHHHhhHhCcC---cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCcee
Q 025436           75 NARMRSLEEFEDHYNARH---TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYE  133 (253)
Q Consensus        75 ~k~F~s~~~L~~H~~~~H---~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~  133 (253)
                      ++.|.....|..|++++.   .|.|.+|++.|.+...|..|++          .|++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~----------~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLE----------LRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHH----------HHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHH----------HhccCCCCC
Confidence            467788888888876422   3889999999999999999986          356777763

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.05  E-value=2.6e-06  Score=53.17  Aligned_cols=28  Identities=11%  Similarity=0.205  Sum_probs=15.8

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |++.|.+..+|..|++
T Consensus         5 ~H~~~~~~~C~~--C~k~f~~~~~l~~H~~   32 (42)
T 2epc_A            5 SSGGETPYLCGQ--CGKSFTQRGSLAVHQR   32 (42)
T ss_dssp             CCCSSCCEECSS--SCCEESSHHHHHHHHH
T ss_pred             cCCCCCCeECCC--CCcccCCHHHHHHHhh
Confidence            355556666655  5555555555555553

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.05  E-value=3.2e-06  Score=53.40  Aligned_cols=28  Identities=11%  Similarity=0.202  Sum_probs=17.5

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |++.|.....|..|++
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~   33 (44)
T 2eoj_A            6 SGTGENPYECCE--CGKVFSRKDQLVSHQK   33 (44)
T ss_dssp             SSSSCCSCEETT--TTEECSSHHHHHHHHT
T ss_pred             ccCCCcCeeCCC--CCCccCCHHHHHHHHH
Confidence            456666666655  6666666666666654

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.04  E-value=2.3e-06  Score=54.99  Aligned_cols=33  Identities=15%  Similarity=0.194  Sum_probs=21.7

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|.+|++.|.+...|..|++          .|.+++||.|.+
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~----------~H~~~k~~~C~~   45 (46)
T 2eom_A           13 HRCSDCGKFFLQASNFIQHRR----------IHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHH----------HHSSCCCSSCCC
T ss_pred             cCCCCCCCeeCChHHHHHHHH----------HhCCCCCCCCCC
Confidence            556666666666666666654          356788888865

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.04  E-value=1.9e-06  Score=53.81  Aligned_cols=31  Identities=16%  Similarity=0.209  Sum_probs=17.3

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceec
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYEC  134 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C  134 (253)
                      |.|++|++.|.+...|..|++          .|.++++|.|
T Consensus        11 ~~C~~C~k~f~~~~~L~~H~~----------~H~~~~~~~C   41 (42)
T 2yte_A           11 YSCAECKETFSDNNRLVQHQK----------MHTVKSGPSS   41 (42)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHH----------HTSCCSSCCC
T ss_pred             eECCCCCCccCCHHHHHHHHH----------HhCCCCCCCC
Confidence            455555555555555555554          2456677776

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.04  E-value=3.1e-06  Score=54.22  Aligned_cols=32  Identities=16%  Similarity=0.299  Sum_probs=17.0

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcC-CCceecC
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARG-YPMYECL  135 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~g-ek~y~C~  135 (253)
                      |.|.+|++.|.+...|..|++          .|++ ++||.|.
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~----------~H~~~~~~~~C~   45 (46)
T 2eoy_A           13 FKCNKCEKTFSCSKYLTQHER----------IHTRGVKSGPSS   45 (46)
T ss_dssp             EECSSSCCEESSSHHHHHHHT----------TCCSCCTTSSSC
T ss_pred             EECcCCCCcCCCHHHHHHHHH----------HcCCCCCCCCCC
Confidence            444444444444444444443          2456 7778774

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.03  E-value=2.3e-06  Score=53.51  Aligned_cols=28  Identities=18%  Similarity=0.386  Sum_probs=15.6

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|..  |+++|.+...|..|++
T Consensus         5 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~   32 (42)
T 2en2_A            5 SSGGEKPYKCET--CGARFVQVAHLRAHVL   32 (42)
T ss_dssp             CCCSSCSEECTT--TCCEESSHHHHHHHTH
T ss_pred             ccCCCCCEeCCC--cChhhCCHHHHHHHHH
Confidence            355555666655  5555555555555553

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.02  E-value=1.6e-06  Score=55.63  Aligned_cols=33  Identities=12%  Similarity=0.129  Sum_probs=22.5

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|.+|++.|.+...|..|++          .|.++++|.|.+
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~----------~H~~~k~~~C~~   45 (46)
T 2emz_A           13 FKCNECGKGFGRRSHLAGHLR----------LHSREKSSGPSS   45 (46)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHH----------HHHHTTCCCSCC
T ss_pred             eECCCCCcccCCHHHHHHHHH----------HhCCCCCCCCCC
Confidence            666666666666666666765          356778888854

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.02  E-value=2e-06  Score=55.08  Aligned_cols=32  Identities=19%  Similarity=0.217  Sum_probs=21.8

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecC
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECL  135 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~  135 (253)
                      |.|.+|++.|.+...|..|++          .|+++++|.|.
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~----------~H~~~k~~~C~   44 (46)
T 2eoh_A           13 YECKECRKTFIQIGHLNQHKR----------VHTGERSSGPS   44 (46)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHH----------HCSSCCSCSTT
T ss_pred             cCCCCcCchhCCHHHHHHHHH----------HhCCCCCCCCC
Confidence            666666666666666666664          35677888885

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.02  E-value=2.4e-06  Score=54.46  Aligned_cols=38  Identities=29%  Similarity=0.427  Sum_probs=24.2

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      |+++++|.|.+  |++.|.....|..|++ .|...++|.|.
T Consensus         5 h~~~k~~~C~~--C~k~f~~~~~l~~H~~-~H~~~~~~~C~   42 (45)
T 2epq_A            5 SSGEKPYSCPV--CGLRFKRKDRMSYHVR-SHDGSVGKSGP   42 (45)
T ss_dssp             CSSCCSSEETT--TTEECSCHHHHHHHHH-HHSCCCCCCCC
T ss_pred             cCCCCCCcCCC--CCcccCCHHHHHHHHH-HccCCCCCCCc
Confidence            55666677755  7777777777777764 45556666554

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.02  E-value=5.6e-06  Score=58.88  Aligned_cols=28  Identities=21%  Similarity=0.313  Sum_probs=25.6

Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhc
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKH  157 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H  157 (253)
                      ..|.|..++|++.+.....|..|++..|
T Consensus        37 ~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A           37 EPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            4899999999999999999999998766

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.01  E-value=3e-06  Score=54.30  Aligned_cols=33  Identities=21%  Similarity=0.305  Sum_probs=21.5

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      |.|.+|++.|.+...|..|++          .|.+++||.|..
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~----------~H~~~k~~~C~~   45 (46)
T 2enh_A           13 YECDVCRKAFSHHASLTQHQR----------VHSGEKPSGPSS   45 (46)
T ss_dssp             CBCTTTCCBCSSSHHHHHHGG----------GSCCSCCCCCCC
T ss_pred             cCCCCcCchhCCHHHHHHHHH----------HhCCCCCCCCCC
Confidence            566666666666666666664          256778888854

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.99  E-value=1.7e-06  Score=54.53  Aligned_cols=27  Identities=11%  Similarity=0.220  Sum_probs=13.7

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhH
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHY   88 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~   88 (253)
                      .|+++++|.|.+  |++.|.+..+|..|+
T Consensus         6 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~   32 (44)
T 2eof_A            6 SGTGEKPYECNE--CQKAFNTKSNLMVHQ   32 (44)
T ss_dssp             CCSCCCSEECTT--TCCEESCHHHHHHHH
T ss_pred             CCCCCCCeECCC--CCcccCCHhHHHHHH
Confidence            344555555544  555555555555554

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.99  E-value=4.3e-06  Score=52.92  Aligned_cols=26  Identities=19%  Similarity=0.379  Sum_probs=13.2

Q ss_pred             cCCCcceEecCCCCCcccCChhHHHhhH
Q 025436           61 TEDGRRVCCPIVGCNARMRSLEEFEDHY   88 (253)
Q Consensus        61 h~~~k~f~C~~~gC~k~F~s~~~L~~H~   88 (253)
                      |+++++|.|.+  |++.|.....|..|+
T Consensus         7 H~~~k~~~C~~--C~k~f~~~~~L~~H~   32 (44)
T 2emb_A            7 GHTRKRYECSK--CQATFNLRKHLIQHQ   32 (44)
T ss_dssp             CCCCSSEECTT--TCCEESCHHHHHHHG
T ss_pred             cCCCCCeECCC--CCCccCCHHHHHHHH
Confidence            44455555544  555555555555554

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=97.99  E-value=4.3e-06  Score=51.67  Aligned_cols=37  Identities=16%  Similarity=0.232  Sum_probs=30.5

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEF  165 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f  165 (253)
                      |+++++|.|.+  |++.|.+...|+.|++ .|...++|..
T Consensus         1 h~~~k~~~C~~--C~k~f~~~~~L~~H~~-~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSF--CKREFRSAQALGGHMN-VHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTT--TCCEESSHHHHHHHHH-TTCCSCTTTT
T ss_pred             CCCCCceECCC--CCcccCCHHHHHHHHH-HcCCCcccee
Confidence            45788999977  9999999999999985 7887887753

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.98  E-value=3.2e-06  Score=53.58  Aligned_cols=32  Identities=13%  Similarity=0.073  Sum_probs=17.8

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecC
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECL  135 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~  135 (253)
                      |.|..|++.|.+...|..|++          .|++++||.|.
T Consensus        11 ~~C~~C~k~f~~~~~L~~H~~----------~H~~~k~~~C~   42 (43)
T 2yrm_A           11 FFCNECDCRFSEEASLKRHTL----------QTHSDKSGPSS   42 (43)
T ss_dssp             BCCSSSCCCBSSHHHHHHHHH----------HHTCTTCSSSC
T ss_pred             EECCCCCCeeCChHHHHHHHH----------hhCCCCCccCC
Confidence            444445555555555555543          25567778775

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.98  E-value=2.4e-06  Score=53.61  Aligned_cols=26  Identities=27%  Similarity=0.657  Sum_probs=12.9

Q ss_pred             cCCCcceEecCCCCCcccCChhHHHhhH
Q 025436           61 TEDGRRVCCPIVGCNARMRSLEEFEDHY   88 (253)
Q Consensus        61 h~~~k~f~C~~~gC~k~F~s~~~L~~H~   88 (253)
                      |+++++|.|.+  |+++|.+...|..|+
T Consensus         6 H~~~k~~~C~~--C~k~f~~~~~L~~H~   31 (42)
T 2eos_A            6 SGGEKPYPCEI--CGTRFRHLQTLKSHL   31 (42)
T ss_dssp             CSSSCCBCCSS--SCCCBSSHHHHHHHT
T ss_pred             cCCCCCEECCC--CCCccCCHHHHHHHH
Confidence            44455555544  555555554444444

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.98  E-value=1.7e-06  Score=55.51  Aligned_cols=32  Identities=22%  Similarity=0.270  Sum_probs=17.6

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecC
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECL  135 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~  135 (253)
                      |.|.+|++.|.+...|..|++          .|.++++|.|.
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~----------~H~~~k~~~C~   44 (46)
T 2yto_A           13 YKCSDCGKAFTRKSGLHIHQQ----------SHTGERHSGPS   44 (46)
T ss_dssp             EECSSSCCEESSHHHHHHHHH----------HHTCCCBTTTB
T ss_pred             EECcccCCccCCHhHHHHHHH----------HcCCCCCCCCC
Confidence            444445555555555555543          24567777774

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.97  E-value=2.2e-06  Score=54.25  Aligned_cols=26  Identities=12%  Similarity=0.229  Sum_probs=13.2

Q ss_pred             cCCCcceEecCCCCCcccCChhHHHhhH
Q 025436           61 TEDGRRVCCPIVGCNARMRSLEEFEDHY   88 (253)
Q Consensus        61 h~~~k~f~C~~~gC~k~F~s~~~L~~H~   88 (253)
                      |+++++|.|.+  |++.|.....|..|+
T Consensus         7 H~~~k~~~C~~--C~k~f~~~~~L~~H~   32 (44)
T 2yu5_A            7 GAGENPFKCSK--CDRVFTQRNYLVQHE   32 (44)
T ss_dssp             CSCCCSEECSS--SSCEESSSHHHHHHH
T ss_pred             cCCCCCeECCC--CCchhCCHHHHHHHh
Confidence            44555555544  555555555555554

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.97  E-value=3.3e-06  Score=53.55  Aligned_cols=32  Identities=22%  Similarity=0.370  Sum_probs=21.4

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecC
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECL  135 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~  135 (253)
                      |.|.+|++.|.+...|..|++          .|.+++||.|.
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~----------~H~~~k~~~C~   44 (44)
T 2eou_A           13 SECQECGKIFRHSSLLIEHQA----------LHAGESGPSSG   44 (44)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHH----------HHTTSCCCCCC
T ss_pred             eECCCCCcccCCHHHHHHHHH----------HHCCCCCCCCC
Confidence            666666666666666666664          35677888883

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.96  E-value=3.7e-06  Score=53.24  Aligned_cols=28  Identities=14%  Similarity=0.341  Sum_probs=14.8

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |++.|.+...|..|++
T Consensus         6 ~H~~~~~~~C~~--C~k~F~~~~~L~~H~~   33 (44)
T 2eox_A            6 SGTDSKSYNCNE--CGKAFTRIFHLTRHQK   33 (44)
T ss_dssp             CCCCCCCEEETT--TTEEESSSHHHHTTHH
T ss_pred             CCCCCCCeECcc--cCcccCCHHHHHHHHH
Confidence            345555555554  5555555555555543

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.95  E-value=4.2e-06  Score=51.35  Aligned_cols=33  Identities=21%  Similarity=0.327  Sum_probs=28.6

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      |+++++|.|.+++|++.|.....|+.|++ +|..
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~-~H~~   35 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLR-WHTG   35 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHH-HHHT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHH-hcCC
Confidence            57899999987679999999999999986 5654

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.91  E-value=2.3e-06  Score=54.74  Aligned_cols=32  Identities=16%  Similarity=0.049  Sum_probs=16.8

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecC
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECL  135 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~  135 (253)
                      |.|.+|++.|.+...|..|++          .|.++++|.|.
T Consensus        13 ~~C~~C~k~F~~~~~L~~H~~----------~H~~~~~~~C~   44 (46)
T 2en3_A           13 FQCKECGMNFSWSCSLFKHLR----------SHERTDPSGPS   44 (46)
T ss_dssp             EECSSSCCEESSSHHHHHHHH----------HHHHSCCSSCS
T ss_pred             eeCcccChhhCCHHHHHHHHH----------HhCCCCCCCCC
Confidence            444444444444445555543          24556777773

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.91  E-value=4.5e-06  Score=53.49  Aligned_cols=31  Identities=19%  Similarity=0.418  Sum_probs=27.4

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhC
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      .+++++||.|++++|+++|.....|..|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~   33 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKV   33 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHh
Confidence            3678999999877899999999999999974

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.90  E-value=3.8e-06  Score=54.58  Aligned_cols=34  Identities=26%  Similarity=0.442  Sum_probs=29.0

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCC
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFP  160 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p  160 (253)
                      |.+++||.|.+++|++.|.....|+.|++ +|...
T Consensus        13 H~~~k~~~C~~~~C~k~F~~~~~L~~H~~-~H~~e   46 (47)
T 1ncs_A           13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQ-THLED   46 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHH-HHTTT
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHH-HccCC
Confidence            67899999976679999999999999986 56543

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=97.89  E-value=8.2e-06  Score=48.59  Aligned_cols=32  Identities=22%  Similarity=0.334  Sum_probs=27.2

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCC
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFP  160 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p  160 (253)
                      |.++++|.|.+  |++.|.....|+.|++ .|...
T Consensus         2 h~~~k~~~C~~--C~k~f~~~~~L~~H~~-~h~~~   33 (35)
T 2elx_A            2 SSGSSGYVCAL--CLKKFVSSIRLRSHIR-EVHGA   33 (35)
T ss_dssp             CCCCCSEECSS--SCCEESSHHHHHHHHH-HTSCT
T ss_pred             CCCCCCeECCC--CcchhCCHHHHHHHHH-HHcCC
Confidence            56889999977  9999999999999986 55544

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=97.89  E-value=5e-06  Score=56.85  Aligned_cols=41  Identities=20%  Similarity=0.350  Sum_probs=36.5

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhc-CCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKH-KFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H-~~p~~f~f~~  167 (253)
                      .|+++++|.|.+  |++.|.+...|..|++.+| ...++|.|+.
T Consensus         4 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~   45 (66)
T 2drp_A            4 TKEGEHTYRCKV--CSRVYTHISNFCRHYVTSHKRNVKVYPCPF   45 (66)
T ss_dssp             EEEETTEEECTT--TCCEESSHHHHHHHHHHHSSSSCCCEECTT
T ss_pred             ccCCCcceECCC--CcchhCCHHHHHHHHHHHcCCCCcCeECCC
Confidence            477899999977  9999999999999998768 5889999986

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.89  E-value=9.6e-06  Score=51.46  Aligned_cols=28  Identities=11%  Similarity=0.063  Sum_probs=16.3

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |++.|.....|..|++
T Consensus         6 ~H~~~k~~~C~~--C~k~F~~~~~L~~H~~   33 (44)
T 2epv_A            6 SGSGEKPYECNE--CGKAFIWKSLLIVHER   33 (44)
T ss_dssp             CCCCCCSEECSS--SCCEESSHHHHHHHHG
T ss_pred             ccCCCcCeECCC--CCcccCchHHHHHHHh
Confidence            455556666655  6666666666655554

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=97.87  E-value=8.8e-06  Score=48.67  Aligned_cols=33  Identities=21%  Similarity=0.349  Sum_probs=27.7

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCC
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPT  161 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~  161 (253)
                      |.++++|.|.+  |++.|.....|..|++ +|...+
T Consensus         2 H~~~k~~~C~~--C~k~f~~~~~l~~H~~-~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRI--CLSAFTTKANCARHLK-VHTDTL   34 (35)
T ss_dssp             CSCCSCEECSS--SCCEESSHHHHHHHHG-GGTSCC
T ss_pred             CCCCcCeeCCC--CCcccCCHHHHHHHHH-HcCCCC
Confidence            56889999977  9999999999999986 565443

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.83  E-value=6.7e-06  Score=49.83  Aligned_cols=33  Identities=18%  Similarity=0.330  Sum_probs=27.9

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCC
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFP  160 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p  160 (253)
                      .|.++++|.|.+  |++.|.....|+.|++ .|...
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~-~h~~~   35 (37)
T 2elo_A            3 SGSSGRSYSCPV--CEKSFSEDRLIKSHIK-TNHPE   35 (37)
T ss_dssp             CCCCCCCCEETT--TTEECSSHHHHHHHHH-HHCSS
T ss_pred             CCCCCCCcCCCC--CCCccCCHHHHHHHHH-HHcCC
Confidence            467899999977  9999999999999986 55544

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=97.82  E-value=1.1e-05  Score=49.80  Aligned_cols=28  Identities=25%  Similarity=0.450  Sum_probs=17.0

Q ss_pred             cCCCcceEecCCCCCcccCChhHHHhhHhC
Q 025436           61 TEDGRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        61 h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      |+++++|.|.+  |++.|.+...|..|+++
T Consensus         1 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~   28 (39)
T 1njq_A            1 XWPPRSYTCSF--CKREFRSAQALGGHMNV   28 (39)
T ss_dssp             -CCSSSEECTT--TCCEESSHHHHHHHHHT
T ss_pred             CCCCCceECCC--CCcccCCHHHHHHHHHH
Confidence            34556666665  66666666666666643

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.78  E-value=1.2e-05  Score=52.60  Aligned_cols=32  Identities=25%  Similarity=0.465  Sum_probs=28.0

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      |+++++|.|.+  |++.|.....|+.|++.+|..
T Consensus         2 Ht~~kp~~C~~--C~k~F~~~~~L~~H~~~~H~~   33 (48)
T 3iuf_A            2 EDRDKPYACDI--CGKRYKNRPGLSYHYAHSHLA   33 (48)
T ss_dssp             CTTTSCEECTT--TCCEESSHHHHHHHHHHSSCC
T ss_pred             CCCCcCEECCC--cCcccCCHHHHHHHhhhhcCC
Confidence            67899999977  999999999999999646754

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=97.77  E-value=1.5e-05  Score=48.17  Aligned_cols=31  Identities=19%  Similarity=0.370  Sum_probs=26.8

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcC
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      .|++++||.|.+  |++.|.+...|..|++ .|.
T Consensus         5 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~-~H~   35 (37)
T 1p7a_A            5 GSTGIKPFQCPD--CDRSFSRSDHLALHRK-RHM   35 (37)
T ss_dssp             TTCCSSSBCCTT--TCCCBSSHHHHHHHHG-GGT
T ss_pred             cCCCCCCccCCC--CCcccCcHHHHHHHHH-Hhc
Confidence            477899999976  9999999999999986 454

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=97.75  E-value=1.7e-05  Score=47.53  Aligned_cols=32  Identities=16%  Similarity=0.328  Sum_probs=23.4

Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhcCCCCccc
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFE  164 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~  164 (253)
                      +||.|.+  |++.|.....|..|++ +|...++|.
T Consensus         1 kp~~C~~--C~k~F~~~~~L~~H~~-~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPE--CPKRFMRSDHLSKHIT-LHELLGEER   32 (33)
T ss_dssp             CCCCCSS--SCCCCSSHHHHHHHHH-HHTTTCCCC
T ss_pred             CcccCCC--CCchhCCHHHHHHHHH-HhCCCCCCC
Confidence            4678865  8888888888888874 677666663

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.75  E-value=1.7e-05  Score=55.43  Aligned_cols=40  Identities=23%  Similarity=0.419  Sum_probs=35.9

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      .|.++++|.|.+  |++.|.+...|+.|++ .|...++|.|..
T Consensus         8 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~-~h~~~~~~~C~~   47 (72)
T 1x6e_A            8 IHSGEKPYGCVE--CGKAFSRSSILVQHQR-VHTGEKPYKCLE   47 (72)
T ss_dssp             TTTTCCCEECSS--SCCEESSHHHHHHHHH-GGGCSCCEECSS
T ss_pred             ccCCCCCccCCC--CCCccCCHHHHHHHHH-hcCCCCCeECCC
Confidence            477899999977  9999999999999986 688889999986

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.74  E-value=1.2e-05  Score=49.18  Aligned_cols=32  Identities=19%  Similarity=0.386  Sum_probs=27.1

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcC
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      .|++++||.|..  |++.|.....|+.|++.+|.
T Consensus         3 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H~   34 (37)
T 2elm_A            3 SGSSGHLYYCSQ--CHYSSITKNCLKRHVIQKHS   34 (37)
T ss_dssp             SSSSSCEEECSS--SSCEEECHHHHHHHHHHHTC
T ss_pred             ccCCCcCeECCC--CCcccCCHHHHHHHHHHHcc
Confidence            467899999976  99999999999999435675

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.73  E-value=1.7e-05  Score=50.41  Aligned_cols=32  Identities=25%  Similarity=0.360  Sum_probs=28.0

Q ss_pred             cCCCcceEecCCCCCcccCChhHHHhhHhCcCcccCCC
Q 025436           61 TEDGRRVCCPIVGCNARMRSLEEFEDHYNARHTASCSV   98 (253)
Q Consensus        61 h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H~~~Cs~   98 (253)
                      +.+++||.|+.  |+++|.+..+|..|+    .|.|+.
T Consensus         3 ~~gekp~~C~~--CgK~F~~~s~L~~H~----py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLP--CGIAFSSPSTLEAHQ----AYYCSH   34 (36)
T ss_dssp             SSSCCCCEETT--TTEECSCHHHHHHHH----HHTSTT
T ss_pred             CCCccCeECCC--CCCccCCHhHccCcC----CeECcC
Confidence            46889999988  999999999999998    577765

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.72  E-value=1.6e-05  Score=48.64  Aligned_cols=31  Identities=16%  Similarity=0.312  Sum_probs=26.9

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhC
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      .|+++++|.|.+++|++.|.....|..|+++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~   32 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRW   32 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHh
Confidence            4788899999876799999999999999864

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=97.71  E-value=1.7e-05  Score=47.46  Aligned_cols=32  Identities=19%  Similarity=0.253  Sum_probs=25.2

Q ss_pred             cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceec
Q 025436           93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYEC  134 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C  134 (253)
                      .|.|.+|++.|.+...|..|+.          .|+++++|.+
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~----------~H~~~~~~~r   33 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHIT----------LHELLGEERR   33 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHH----------HHTTTCCCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHH----------HhCCCCCCCC
Confidence            3788888888888888888886          3677888753

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.71  E-value=2.2e-05  Score=47.26  Aligned_cols=32  Identities=31%  Similarity=0.600  Sum_probs=27.4

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCC
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFP  160 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p  160 (253)
                      |.++++|.|.+  |++.|.....|..|++ +|...
T Consensus         4 h~~~k~~~C~~--C~k~f~~~~~l~~H~~-~H~~~   35 (36)
T 2elv_A            4 GSSGLLYDCHI--CERKFKNELDRDRHML-VHGDK   35 (36)
T ss_dssp             SCCCCCEECSS--SCCEESSHHHHHHHHT-TTSTT
T ss_pred             CCCCCCeECCC--CCCccCCHHHHHHHHH-HhcCC
Confidence            67889999977  9999999999999986 66543

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.68  E-value=2.4e-05  Score=46.87  Aligned_cols=32  Identities=22%  Similarity=0.235  Sum_probs=27.4

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      .|.++++|.|.+  |++.|.....|..|++ +|..
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~-~H~~   34 (36)
T 2elt_A            3 SGSSGKPYKCPQ--CSYASAIKANLNVHLR-KHTG   34 (36)
T ss_dssp             CSCCCCSEECSS--SSCEESSHHHHHHHHH-HHTC
T ss_pred             CCCCCCCCCCCC--CCcccCCHHHHHHHHH-HccC
Confidence            367899999977  9999999999999986 5654

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.67  E-value=3e-05  Score=46.64  Aligned_cols=32  Identities=13%  Similarity=0.346  Sum_probs=27.5

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      .|.+++||.|.+  |++.|.....|..|++ .|..
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~-~H~~   34 (36)
T 2elq_A            3 SGSSGKPFKCSL--CEYATRSKSNLKAHMN-RHST   34 (36)
T ss_dssp             SSCCCCSEECSS--SSCEESCHHHHHHHHH-HSST
T ss_pred             CCCCCCCccCCC--CCchhCCHHHHHHHHH-Hhcc
Confidence            367899999977  9999999999999986 5654

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.66  E-value=2.1e-05  Score=55.51  Aligned_cols=40  Identities=18%  Similarity=0.278  Sum_probs=34.2

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcC--CCCcccccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHK--FPTSFEFFK  167 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~--~p~~f~f~~  167 (253)
                      |+++++|.|.+  |++.|.+...|..|++.++.  ..++|.|..
T Consensus         2 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~   43 (78)
T 2d9h_A            2 SSGSSGLQCEI--CGFTCRQKASLNWHQRKHAETVAALRFPCEF   43 (78)
T ss_dssp             CCSCCCEECSS--SCCEESSHHHHHHHHHHHHHHTTTCCEECTT
T ss_pred             CCCCcCeECCC--CCCeeCCHHHHHHHHHHhhccCCCcccCCCC
Confidence            67899999977  99999999999999975443  378899986

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.65  E-value=1.7e-05  Score=48.05  Aligned_cols=32  Identities=19%  Similarity=0.315  Sum_probs=27.2

Q ss_pred             hhcCCCceecCccccCCcCCCh-hHHHhHHhhhcCC
Q 025436          125 VARGYPMYECLVEGCGLKFKNY-KSRQQHLVDKHKF  159 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~-~~rk~Hl~~~H~~  159 (253)
                      .|.++++|.|.+  |++.|... ..|..|++ +|..
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~~L~~H~~-~H~~   35 (37)
T 2elp_A            3 SGSSGRAMKCPY--CDFYFMKNGSDLQRHIW-AHEG   35 (37)
T ss_dssp             SCCCCCCEECSS--SSCEECSSCHHHHHHHH-HHHT
T ss_pred             CCCCCCCeECCC--CChhhccCHHHHHHHHH-hcCC
Confidence            467899999977  99999999 99999986 5643

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.65  E-value=3.1e-05  Score=53.63  Aligned_cols=39  Identities=13%  Similarity=0.081  Sum_probs=35.2

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      |.++++|.|.+  |++.|.+...|+.|++ .|...++|.|+.
T Consensus         4 ~~~~~~~~C~~--C~k~f~~~~~L~~H~~-~H~~~~~~~C~~   42 (70)
T 1x5w_A            4 GSSGHPEKCSE--CSYSCSSKAALRIHER-IHCTDRPFKCNY   42 (70)
T ss_dssp             CCCCCSEECSS--SSCEESSHHHHHHHHG-GGCCSCSEECSS
T ss_pred             CCCCCCeECCC--CCcccCCHHHHHHHHH-HcCCCCCEeCCC
Confidence            67889999977  9999999999999996 688889999987

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.65  E-value=1.8e-05  Score=50.29  Aligned_cols=26  Identities=23%  Similarity=0.494  Sum_probs=23.7

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHH
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHL  153 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl  153 (253)
                      ..|++||.|..  ||+.|...++|++|+
T Consensus         3 ~~gekp~~C~~--CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLP--CGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETT--TTEECSCHHHHHHHH
T ss_pred             CCCccCeECCC--CCCccCCHhHccCcC
Confidence            46899999976  999999999999998

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.61  E-value=3.7e-05  Score=46.01  Aligned_cols=31  Identities=26%  Similarity=0.379  Sum_probs=26.7

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      |.++++|.|.+  |++.|.....|..|++ +|..
T Consensus         4 h~~~~~~~C~~--C~k~f~~~~~l~~H~~-~H~~   34 (36)
T 2elr_A            4 GSSGKTHLCDM--CGKKFKSKGTLKSHKL-LHTA   34 (36)
T ss_dssp             CCCCSSCBCTT--TCCBCSSHHHHHHHHH-HHSS
T ss_pred             CCCCCCeecCc--CCCCcCchHHHHHHHH-HhcC
Confidence            67889999977  9999999999999986 5654

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.61  E-value=8.6e-06  Score=60.98  Aligned_cols=41  Identities=17%  Similarity=0.201  Sum_probs=33.7

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCCccccccc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFKK  168 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~~  168 (253)
                      .|+++++|.|.+  |++.|.....|+.|++ +|...++|.|...
T Consensus        19 ~H~~~kpy~C~~--C~k~F~~~~~L~~H~~-~Ht~ekp~~C~~~   59 (88)
T 1x6f_A           19 PRLQNSTYQCKH--CDSKLQSTAELTSHLN-IHNEEFQKRAKRQ   59 (88)
T ss_dssp             SCCCCSCEECSS--SCCEESSHHHHHHHHH-HHHHHHHHHCCCC
T ss_pred             ccCCCCCCcCCC--CCCEeCCHHHHHHHHH-HhCCCCCcccchh
Confidence            477888999976  9999999999999985 6777888888653

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.61  E-value=6.7e-06  Score=59.49  Aligned_cols=25  Identities=20%  Similarity=0.425  Sum_probs=15.4

Q ss_pred             cCCCcceEecCCCCCcccCChhHHHhhH
Q 025436           61 TEDGRRVCCPIVGCNARMRSLEEFEDHY   88 (253)
Q Consensus        61 h~~~k~f~C~~~gC~k~F~s~~~L~~H~   88 (253)
                      |.+.++|.|..  |++.| ...+|+.|+
T Consensus        12 ~c~~r~~~C~~--C~~~~-~~~~L~~H~   36 (75)
T 2d9k_A           12 ECPLRLAVCQH--CDLEL-SILKLKEHE   36 (75)
T ss_dssp             CCCCCCEECSS--SCCEE-CHHHHHHHH
T ss_pred             cCCCcccCCcc--cChHh-hHHHHHHHH
Confidence            55666666655  66666 366666665

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.60  E-value=5e-05  Score=44.34  Aligned_cols=30  Identities=23%  Similarity=0.348  Sum_probs=23.9

Q ss_pred             CCceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436          129 YPMYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       129 ek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      ++||.|.++.|++.|.....|..|++ +|..
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~-~H~~   30 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKK-SHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHG-GGTC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHH-HccC
Confidence            46899974469999999999999985 5654

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=97.59  E-value=3.5e-05  Score=45.73  Aligned_cols=28  Identities=14%  Similarity=0.373  Sum_probs=23.2

Q ss_pred             cCCCcceEecCCCCCcccCChhHHHhhHhC
Q 025436           61 TEDGRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        61 h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      |+++++|.|.+  |++.|.....|..|+++
T Consensus         2 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~   29 (35)
T 2elx_A            2 SSGSSGYVCAL--CLKKFVSSIRLRSHIRE   29 (35)
T ss_dssp             CCCCCSEECSS--SCCEESSHHHHHHHHHH
T ss_pred             CCCCCCeECCC--CcchhCCHHHHHHHHHH
Confidence            67788888877  88888888888888864

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.59  E-value=3.8e-05  Score=46.74  Aligned_cols=30  Identities=20%  Similarity=0.481  Sum_probs=23.1

Q ss_pred             cCCCcceEecCCCCCcccCChhHHHhhHhC
Q 025436           61 TEDGRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        61 h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      |+++++|.|.+++|+++|.....|..|+++
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~   30 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHK   30 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHH
Confidence            567788888765688888888888888753

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.55  E-value=4.9e-05  Score=45.70  Aligned_cols=31  Identities=29%  Similarity=0.392  Sum_probs=26.7

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      |.++++|.|.+  |++.|.....|..|++ +|..
T Consensus         4 ~~~~k~~~C~~--C~k~f~~~~~l~~H~~-~H~~   34 (36)
T 2els_A            4 GSSGKIFTCEY--CNKVFKFKHSLQAHLR-IHTN   34 (36)
T ss_dssp             TSCCCCEECTT--TCCEESSHHHHHHHHH-HHCC
T ss_pred             CCCCCCEECCC--CCceeCCHHHHHHHHH-HhCC
Confidence            56789999977  9999999999999986 5653

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=97.55  E-value=5.1e-05  Score=45.19  Aligned_cols=28  Identities=18%  Similarity=0.426  Sum_probs=23.7

Q ss_pred             cCCCcceEecCCCCCcccCChhHHHhhHhC
Q 025436           61 TEDGRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        61 h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      |+++++|.|.+  |++.|.....|..|+++
T Consensus         2 H~~~k~~~C~~--C~k~f~~~~~l~~H~~~   29 (35)
T 1srk_A            2 SSGKRPFVCRI--CLSAFTTKANCARHLKV   29 (35)
T ss_dssp             CSCCSCEECSS--SCCEESSHHHHHHHHGG
T ss_pred             CCCCcCeeCCC--CCcccCCHHHHHHHHHH
Confidence            67888899987  99999988888888864

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.55  E-value=6e-05  Score=43.76  Aligned_cols=29  Identities=24%  Similarity=0.385  Sum_probs=23.0

Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      +||.|.++.|++.|.....|..|++ +|..
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~-~H~~   29 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKR-THTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHT-TTSC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHH-HhcC
Confidence            4789974469999999999999985 5654

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.54  E-value=4e-05  Score=50.01  Aligned_cols=28  Identities=21%  Similarity=0.526  Sum_probs=24.3

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|+++++|.|.+  |+++|....+|..|++
T Consensus         1 ~Ht~~kp~~C~~--C~k~F~~~~~L~~H~~   28 (48)
T 3iuf_A            1 GEDRDKPYACDI--CGKRYKNRPGLSYHYA   28 (48)
T ss_dssp             -CTTTSCEECTT--TCCEESSHHHHHHHHH
T ss_pred             CCCCCcCEECCC--cCcccCCHHHHHHHhh
Confidence            378889999988  9999999999999987

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.51  E-value=4.3e-05  Score=55.12  Aligned_cols=62  Identities=19%  Similarity=0.163  Sum_probs=49.5

Q ss_pred             hHHHhhHhCc---CcccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHhhhcC
Q 025436           82 EEFEDHYNAR---HTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus        82 ~~L~~H~~~~---H~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      .+|+.|+.+.   ..+.|..|++.|. ...|..|+ .          +.+++||.|..  |++.|.. ..|..|+..+..
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~----------~c~~~~~~C~~--C~~~~~~-~~l~~H~~~c~~   67 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-D----------YCGARTELCGN--CGRNVLV-KDLKTHPEVCGR   67 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-H----------HHHHCEEECSS--SCCEEET-TGGGTHHHHBTT
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-h----------HcCCCceEccc--CCCcCcH-HHHHHHHHHccC
Confidence            4567777531   2489999999995 88899998 3          46789999976  9999999 899999995443

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.46  E-value=5.1e-05  Score=45.76  Aligned_cols=29  Identities=21%  Similarity=0.544  Sum_probs=24.2

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhC
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      .|+++++|.|..  |++.|.....|..|+++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~   31 (37)
T 2elo_A            3 SGSSGRSYSCPV--CEKSFSEDRLIKSHIKT   31 (37)
T ss_dssp             CCCCCCCCEETT--TTEECSSHHHHHHHHHH
T ss_pred             CCCCCCCcCCCC--CCCccCCHHHHHHHHHH
Confidence            577888899987  88888888888888864

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.45  E-value=5e-05  Score=46.35  Aligned_cols=28  Identities=14%  Similarity=0.296  Sum_probs=24.7

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhh-Hh
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDH-YN   89 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H-~~   89 (253)
                      .|++++||.|..  |+++|.....|..| ++
T Consensus         3 ~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~   31 (37)
T 2elm_A            3 SGSSGHLYYCSQ--CHYSSITKNCLKRHVIQ   31 (37)
T ss_dssp             SSSSSCEEECSS--SSCEEECHHHHHHHHHH
T ss_pred             ccCCCcCeECCC--CCcccCCHHHHHHHHHH
Confidence            578899999988  99999999999999 54

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=97.43  E-value=7.8e-05  Score=44.91  Aligned_cols=29  Identities=14%  Similarity=0.300  Sum_probs=24.1

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhC
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      .|+++++|.|+.  |++.|.+...|..|+++
T Consensus         5 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~   33 (37)
T 1p7a_A            5 GSTGIKPFQCPD--CDRSFSRSDHLALHRKR   33 (37)
T ss_dssp             TTCCSSSBCCTT--TCCCBSSHHHHHHHHGG
T ss_pred             cCCCCCCccCCC--CCcccCcHHHHHHHHHH
Confidence            577888888877  88888888888888864

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.42  E-value=8.3e-05  Score=44.64  Aligned_cols=29  Identities=24%  Similarity=0.527  Sum_probs=25.5

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhC
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      .|+++++|.|.+  |++.|.....|..|+++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~   31 (36)
T 2elq_A            3 SGSSGKPFKCSL--CEYATRSKSNLKAHMNR   31 (36)
T ss_dssp             SSCCCCSEECSS--SSCEESCHHHHHHHHHH
T ss_pred             CCCCCCCccCCC--CCchhCCHHHHHHHHHH
Confidence            578889999988  99999999999999864

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.40  E-value=0.00011  Score=44.06  Aligned_cols=29  Identities=17%  Similarity=0.344  Sum_probs=25.4

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhC
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      .|+++++|.|.+  |++.|.....|..|+++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~   31 (36)
T 2elv_A            3 SGSSGLLYDCHI--CERKFKNELDRDRHMLV   31 (36)
T ss_dssp             CSCCCCCEECSS--SCCEESSHHHHHHHHTT
T ss_pred             CCCCCCCeECCC--CCCccCCHHHHHHHHHH
Confidence            577889999988  99999999999999865

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.38  E-value=0.00013  Score=41.18  Aligned_cols=28  Identities=32%  Similarity=0.630  Sum_probs=22.9

Q ss_pred             CCceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436          129 YPMYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       129 ek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      ++||.|.+  |++.|.....|..|++ .|..
T Consensus         1 ~k~~~C~~--C~~~f~~~~~l~~H~~-~h~~   28 (30)
T 2m0d_A            1 MKPYQCDY--CGRSFSDPTSKMRHLE-THDT   28 (30)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHH-TTCC
T ss_pred             CcCccCCC--CCcccCCHHHHHHHHH-Hhcc
Confidence            46899976  9999999999999986 5554

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.35  E-value=1.9e-05  Score=46.84  Aligned_cols=31  Identities=13%  Similarity=0.341  Sum_probs=20.5

Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhcCCCCcc
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSF  163 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f  163 (253)
                      +||.|.+  |++.|.....|+.|++ +|...++|
T Consensus         1 kp~~C~~--C~k~f~~~~~L~~H~~-~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPA--CPKRFMRSDALSKHIK-TAFIVVAL   31 (32)
T ss_dssp             CCSSSSS--SCTTHHHHHTTSSSTT-SSSSSSSC
T ss_pred             CCCCCCC--CCcccCCHHHHHHHHH-HHccCCCC
Confidence            3677755  7777777777777764 56655554

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.35  E-value=0.00012  Score=41.14  Aligned_cols=26  Identities=19%  Similarity=0.566  Sum_probs=22.0

Q ss_pred             CCceecCccccCCcCCChhHHHhHHhhhc
Q 025436          129 YPMYECLVEGCGLKFKNYKSRQQHLVDKH  157 (253)
Q Consensus       129 ek~y~C~vegC~kkF~t~~~rk~Hl~~~H  157 (253)
                      ++||.|.+  ||+.|.....|..|++ .|
T Consensus         1 ek~~~C~~--C~k~f~~~~~l~~H~~-~H   26 (27)
T 2kvh_A            1 EKPFSCSL--CPQRSRDFSAMTKHLR-TH   26 (27)
T ss_dssp             CCCEECSS--SSCEESSHHHHHHHHH-HC
T ss_pred             CcCccCCC--cChhhCCHHHHHHHHH-Hc
Confidence            46899966  9999999999999985 55

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.34  E-value=0.00014  Score=41.40  Aligned_cols=28  Identities=21%  Similarity=0.343  Sum_probs=20.9

Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      +||.|..  |++.|.+...|..|+..+|..
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            1 KAYACGL--CNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CCSBCTT--TCCBCSSSHHHHHHHTTTSCC
T ss_pred             CCcCCcc--cCcccCChHHHHHHHHHHccC
Confidence            3688866  888888888888885456654

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.33  E-value=9.7e-05  Score=44.10  Aligned_cols=29  Identities=17%  Similarity=0.355  Sum_probs=24.8

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhC
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      .|+++++|.|.+  |++.|.....|..|+++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~   31 (36)
T 2elt_A            3 SGSSGKPYKCPQ--CSYASAIKANLNVHLRK   31 (36)
T ss_dssp             CSCCCCSEECSS--SSCEESSHHHHHHHHHH
T ss_pred             CCCCCCCCCCCC--CCcccCCHHHHHHHHHH
Confidence            577888999988  99999999999999864

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.31  E-value=0.00013  Score=41.11  Aligned_cols=27  Identities=30%  Similarity=0.583  Sum_probs=21.4

Q ss_pred             CCceecCccccCCcCCChhHHHhHHhhhcC
Q 025436          129 YPMYECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       129 ek~y~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      +++|.|.+  |++.|.+...|..|++ .|.
T Consensus         1 ~k~~~C~~--C~k~f~~~~~l~~H~~-~h~   27 (28)
T 2kvf_A            1 MRPYSCSV--CGKRFSLKHQMETHYR-VHT   27 (28)
T ss_dssp             CCSEECSS--SCCEESCHHHHHHHHT-TSC
T ss_pred             CcCccCCC--CCcccCCHHHHHHHHH-hcC
Confidence            36789966  9999999999999985 453

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.29  E-value=0.0001  Score=41.68  Aligned_cols=26  Identities=27%  Similarity=0.474  Sum_probs=22.1

Q ss_pred             CCceecCccccCCcCCChhHHHhHHhhhc
Q 025436          129 YPMYECLVEGCGLKFKNYKSRQQHLVDKH  157 (253)
Q Consensus       129 ek~y~C~vegC~kkF~t~~~rk~Hl~~~H  157 (253)
                      ++||.|.+  |++.|.....|+.|++ .|
T Consensus         1 ~k~~~C~~--C~k~f~~~~~l~~H~~-~H   26 (27)
T 2kvg_A            1 AAPYRCPL--CRAGCPSLASMQAHMR-GH   26 (27)
T ss_dssp             CCTEEETT--TTEEESCHHHHHHHHT-TC
T ss_pred             CcCcCCCC--CCcccCCHHHHHHHHH-hc
Confidence            46899976  9999999999999985 55

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.28  E-value=3e-05  Score=45.94  Aligned_cols=30  Identities=23%  Similarity=0.312  Sum_probs=23.4

Q ss_pred             cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCce
Q 025436           93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMY  132 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y  132 (253)
                      .|.|.+|++.|.+...|..|++.          |++++||
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~----------H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKT----------AFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTS----------SSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHH----------HccCCCC
Confidence            37888888888888888888863          5677765

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.26  E-value=7.4e-05  Score=48.31  Aligned_cols=32  Identities=13%  Similarity=0.333  Sum_probs=27.1

Q ss_pred             cccCCCcceEecCCCCCcccCChhHHHhhHhC
Q 025436           59 MVTEDGRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        59 ~~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      ..|+++++|.|.++.|+++|.....|..|+++
T Consensus        11 ~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~   42 (47)
T 1ncs_A           11 VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQT   42 (47)
T ss_dssp             CEEETTTEEECCCTTCCCEECSSSSHHHHHHH
T ss_pred             hccCCCCCeECCCCCCCCccCCHHHHHHHHHH
Confidence            35888999999766699999999999999864

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.23  E-value=0.00024  Score=39.99  Aligned_cols=25  Identities=24%  Similarity=0.624  Sum_probs=17.0

Q ss_pred             ceecCccccCCcCCChhHHHhHHhhhc
Q 025436          131 MYECLVEGCGLKFKNYKSRQQHLVDKH  157 (253)
Q Consensus       131 ~y~C~vegC~kkF~t~~~rk~Hl~~~H  157 (253)
                      +|.|.+  |++.|.....|..|++.++
T Consensus         2 ~~~C~~--C~k~f~~~~~l~~H~~~h~   26 (30)
T 1klr_A            2 TYQCQY--CEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCSS--SSCCCSCSHHHHHHHHHHT
T ss_pred             CccCCC--CCCccCCHHHHHHHHHHHc
Confidence            577755  7777777777777765433

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.21  E-value=0.00013  Score=43.46  Aligned_cols=29  Identities=17%  Similarity=0.445  Sum_probs=22.1

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhC
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      .|+++++|.|.+  |++.|.+...|..|+++
T Consensus         3 ~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~   31 (36)
T 2elr_A            3 SGSSGKTHLCDM--CGKKFKSKGTLKSHKLL   31 (36)
T ss_dssp             CCCCCSSCBCTT--TCCBCSSHHHHHHHHHH
T ss_pred             CCCCCCCeecCc--CCCCcCchHHHHHHHHH
Confidence            466777888877  88888888888888754

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.20  E-value=0.00016  Score=43.57  Aligned_cols=29  Identities=24%  Similarity=0.501  Sum_probs=23.9

Q ss_pred             ccCCCcceEecCCCCCcccCCh-hHHHhhHhC
Q 025436           60 VTEDGRRVCCPIVGCNARMRSL-EEFEDHYNA   90 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~-~~L~~H~~~   90 (253)
                      .|+++++|.|++  |++.|... ..|..|+++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~~L~~H~~~   32 (37)
T 2elp_A            3 SGSSGRAMKCPY--CDFYFMKNGSDLQRHIWA   32 (37)
T ss_dssp             SCCCCCCEECSS--SSCEECSSCHHHHHHHHH
T ss_pred             CCCCCCCeECCC--CChhhccCHHHHHHHHHh
Confidence            577888899977  88888888 888888864

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.20  E-value=0.00021  Score=40.30  Aligned_cols=26  Identities=19%  Similarity=0.444  Sum_probs=20.1

Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhcC
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      +||.|.+  |++.|.....|..|++ .|.
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~-~H~   26 (29)
T 1rik_A            1 YKFACPE--CPKRFMRSDHLTLHIL-LHE   26 (29)
T ss_dssp             CCEECSS--SSCEESCSHHHHHHHT-GGG
T ss_pred             CCccCCC--CCchhCCHHHHHHHHH-Hhc
Confidence            4788866  8888888888888875 454

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.19  E-value=0.00025  Score=39.84  Aligned_cols=27  Identities=22%  Similarity=0.432  Sum_probs=20.7

Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      +||.|.+  |++.|.....|..|++ .|..
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~-~h~~   27 (29)
T 1ard_A            1 RSFVCEV--CTRAFARQEHLKRHYR-SHTN   27 (29)
T ss_dssp             CCCBCTT--TCCBCSSHHHHHHHHH-HHSC
T ss_pred             CCeECCC--CCcccCCHHHHHHHHH-HhcC
Confidence            3688866  8888888888888886 4543

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.15  E-value=0.00013  Score=54.54  Aligned_cols=49  Identities=18%  Similarity=0.270  Sum_probs=37.8

Q ss_pred             cccCCCcceEecCCCCCcccCChhHHHhhHhCcCc----ccCCCCCccCCCchhhhhhhh
Q 025436           59 MVTEDGRRVCCPIVGCNARMRSLEEFEDHYNARHT----ASCSVCCRVYPTSRLLSIHVS  114 (253)
Q Consensus        59 ~~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H~----~~Cs~C~ksF~s~~~L~~Hi~  114 (253)
                      ..|+++++|.|.+  |++.|.....|..|+++ |.    |.|..|.+    ...|..|.+
T Consensus        18 ~~H~~~kpy~C~~--C~k~F~~~~~L~~H~~~-Ht~ekp~~C~~~~~----~~~~~~~~~   70 (88)
T 1x6f_A           18 GPRLQNSTYQCKH--CDSKLQSTAELTSHLNI-HNEEFQKRAKRQER----RKQLLSKQK   70 (88)
T ss_dssp             CSCCCCSCEECSS--SCCEESSHHHHHHHHHH-HHHHHHHHCCCCSC----CCCCCCCCC
T ss_pred             cccCCCCCCcCCC--CCCEeCCHHHHHHHHHH-hCCCCCcccchhhh----HHHHHhhhc
Confidence            4688999999988  99999999999999975 53    88877653    444445543

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.15  E-value=0.00027  Score=39.85  Aligned_cols=25  Identities=28%  Similarity=0.600  Sum_probs=20.7

Q ss_pred             CcceEecCCCCCcccCChhHHHhhHhC
Q 025436           64 GRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        64 ~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      ++||.|..  |++.|.....|..|+++
T Consensus         1 ~k~~~C~~--C~k~f~~~~~l~~H~~~   25 (27)
T 2kvg_A            1 AAPYRCPL--CRAGCPSLASMQAHMRG   25 (27)
T ss_dssp             CCTEEETT--TTEEESCHHHHHHHHTT
T ss_pred             CcCcCCCC--CCcccCCHHHHHHHHHh
Confidence            36788987  99999999999999864

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.14  E-value=0.00019  Score=43.01  Aligned_cols=29  Identities=17%  Similarity=0.429  Sum_probs=23.3

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhC
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      .|+++++|.|..  |++.|.....|..|+++
T Consensus         3 ~~~~~k~~~C~~--C~k~f~~~~~l~~H~~~   31 (36)
T 2els_A            3 SGSSGKIFTCEY--CNKVFKFKHSLQAHLRI   31 (36)
T ss_dssp             TTSCCCCEECTT--TCCEESSHHHHHHHHHH
T ss_pred             CCCCCCCEECCC--CCceeCCHHHHHHHHHH
Confidence            356778888877  88888888888888864

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.14  E-value=0.00023  Score=40.01  Aligned_cols=28  Identities=29%  Similarity=0.619  Sum_probs=21.7

Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhcC
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      ++|.|..+.|++.|.....|..|++ +|.
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~-~H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKK-IHT   28 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHG-GGT
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHH-HhC
Confidence            4688974469999999999999985 453

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.12  E-value=0.00032  Score=39.36  Aligned_cols=24  Identities=29%  Similarity=0.732  Sum_probs=18.4

Q ss_pred             cceEecCCCCCcccCChhHHHhhHhC
Q 025436           65 RRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        65 k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      ++|.|..  |++.|.+...|..|+++
T Consensus         2 k~~~C~~--C~k~f~~~~~l~~H~~~   25 (28)
T 2kvf_A            2 RPYSCSV--CGKRFSLKHQMETHYRV   25 (28)
T ss_dssp             CSEECSS--SCCEESCHHHHHHHHTT
T ss_pred             cCccCCC--CCcccCCHHHHHHHHHh
Confidence            5778877  88888888888888764

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.11  E-value=0.00025  Score=41.19  Aligned_cols=26  Identities=19%  Similarity=0.427  Sum_probs=14.9

Q ss_pred             cceEecCCCCCcccCChhHHHhhHhC
Q 025436           65 RRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        65 k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      +||.|..+.|+++|.....|..|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~   27 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKS   27 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGG
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHH
Confidence            45666533366666666666666543

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.09  E-value=0.00026  Score=39.63  Aligned_cols=24  Identities=21%  Similarity=0.649  Sum_probs=18.6

Q ss_pred             cceEecCCCCCcccCChhHHHhhHhC
Q 025436           65 RRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        65 k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      +||.|..  |++.|.....|..|+++
T Consensus         2 k~~~C~~--C~k~f~~~~~l~~H~~~   25 (27)
T 2kvh_A            2 KPFSCSL--CPQRSRDFSAMTKHLRT   25 (27)
T ss_dssp             CCEECSS--SSCEESSHHHHHHHHHH
T ss_pred             cCccCCC--cChhhCCHHHHHHHHHH
Confidence            5788877  88888888888888754

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.06  E-value=0.00033  Score=50.06  Aligned_cols=31  Identities=26%  Similarity=0.470  Sum_probs=26.6

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      +++++||.|.+  |++.|.....|+.|++ +|..
T Consensus         8 ~~~ekpy~C~~--CgK~F~~~s~L~~H~r-~Htg   38 (66)
T 2epp_A            8 LREAGILPCGL--CGKVFTDANRLRQHEA-QHGV   38 (66)
T ss_dssp             CCCCCCCCCTT--TCCCCSCHHHHHHHHH-HHTT
T ss_pred             CCCccCcCCCC--CCCccCCHHHHHhhhh-hhCC
Confidence            56789999976  9999999999999996 5553

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.03  E-value=0.00039  Score=40.16  Aligned_cols=25  Identities=20%  Similarity=0.440  Sum_probs=14.1

Q ss_pred             ceEecCCCCCcccCChhHHHhhHhC
Q 025436           66 RVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        66 ~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      ||.|..+.|+++|.....|..|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~   26 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRT   26 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTT
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHH
Confidence            4566533366666666666666543

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.01  E-value=0.00031  Score=39.32  Aligned_cols=26  Identities=27%  Similarity=0.519  Sum_probs=20.3

Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhcC
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      +||.|.+  |++.|.+...|..|++ +|.
T Consensus         1 ~~~~C~~--C~k~f~~~~~l~~H~~-~H~   26 (29)
T 2m0f_A            1 GPLKCRE--CGKQFTTSGNLKRHLR-IHS   26 (29)
T ss_dssp             CCEECTT--TSCEESCHHHHHHHHH-HHH
T ss_pred             CCccCCC--CCCccCChhHHHHHHH-Hhc
Confidence            4788866  8888888888888875 454

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=96.99  E-value=0.00044  Score=49.41  Aligned_cols=29  Identities=10%  Similarity=0.284  Sum_probs=23.9

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhC
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      .+.+++||.|..  |+++|.....|..|+++
T Consensus         7 ~~~~ekpy~C~~--CgK~F~~~s~L~~H~r~   35 (66)
T 2epp_A            7 GLREAGILPCGL--CGKVFTDANRLRQHEAQ   35 (66)
T ss_dssp             SCCCCCCCCCTT--TCCCCSCHHHHHHHHHH
T ss_pred             CCCCccCcCCCC--CCCccCCHHHHHhhhhh
Confidence            356778899987  99999999999988875

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=96.99  E-value=0.00045  Score=38.27  Aligned_cols=24  Identities=25%  Similarity=0.497  Sum_probs=16.6

Q ss_pred             ceecCccccCCcCCChhHHHhHHhhhc
Q 025436          131 MYECLVEGCGLKFKNYKSRQQHLVDKH  157 (253)
Q Consensus       131 ~y~C~vegC~kkF~t~~~rk~Hl~~~H  157 (253)
                      ||.|.+  |++.|.....|..|++ +|
T Consensus         1 ~~~C~~--C~k~f~~~~~l~~H~~-~h   24 (27)
T 1znf_A            1 XYKCGL--CERSFVEKSALSRHQR-VH   24 (27)
T ss_dssp             -CBCSS--SCCBCSSHHHHHHHGG-GT
T ss_pred             CccCCC--CCCcCCCHHHHHHHHH-Hc
Confidence            477755  7777777777777774 44

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=96.99  E-value=0.0004  Score=38.71  Aligned_cols=26  Identities=27%  Similarity=0.420  Sum_probs=19.6

Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhcC
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      +||.|.+  |++.|.....|..|++ +|.
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~-~h~   26 (29)
T 2m0e_A            1 KEHKCPH--CDKKFNQVGNLKAHLK-IHI   26 (29)
T ss_dssp             CCCCCSS--CCCCCCTTTHHHHHHH-HHH
T ss_pred             CCCcCCC--CCcccCCHHHHHHHHH-Hhc
Confidence            4688866  8888888888888875 443

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.00  E-value=0.00012  Score=40.62  Aligned_cols=23  Identities=26%  Similarity=0.548  Sum_probs=16.8

Q ss_pred             CceecCccccCCcCCChhHHHhHHh
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLV  154 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~  154 (253)
                      +||.|.+  ||+.|.....|..|++
T Consensus         1 kp~~C~~--C~k~f~~~~~l~~H~~   23 (26)
T 2lvu_A            1 KPYVCER--CGKRFVQSSQLANHIR   23 (26)
Confidence            3677755  8888877777777764

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=96.91  E-value=0.00062  Score=38.20  Aligned_cols=22  Identities=23%  Similarity=0.333  Sum_probs=16.4

Q ss_pred             ccCCCCCccCCCchhhhhhhhh
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSE  115 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e  115 (253)
                      |.|.+|++.|.+...|..|+..
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~   24 (30)
T 1klr_A            3 YQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCSSSSCCCSCSHHHHHHHHH
T ss_pred             ccCCCCCCccCCHHHHHHHHHH
Confidence            6777777777777777777764

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=96.90  E-value=0.00061  Score=38.22  Aligned_cols=24  Identities=13%  Similarity=0.295  Sum_probs=15.8

Q ss_pred             cceEecCCCCCcccCChhHHHhhHhC
Q 025436           65 RRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        65 k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      ++|.|..  |++.|.....|..|+++
T Consensus         2 k~~~C~~--C~~~f~~~~~l~~H~~~   25 (30)
T 2m0d_A            2 KPYQCDY--CGRSFSDPTSKMRHLET   25 (30)
T ss_dssp             CCEECTT--TCCEESCHHHHHHHHHT
T ss_pred             cCccCCC--CCcccCCHHHHHHHHHH
Confidence            5666665  77777766666666653

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=96.88  E-value=0.00053  Score=38.40  Aligned_cols=21  Identities=29%  Similarity=0.602  Sum_probs=13.0

Q ss_pred             ccCCCCCccCCCchhhhhhhh
Q 025436           94 ASCSVCCRVYPTSRLLSIHVS  114 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~  114 (253)
                      |.|..|++.|.+...|..|+.
T Consensus         3 ~~C~~C~~~f~~~~~l~~H~~   23 (29)
T 1ard_A            3 FVCEVCTRAFARQEHLKRHYR   23 (29)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHH
T ss_pred             eECCCCCcccCCHHHHHHHHH
Confidence            556666666666666666654

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=95.92  E-value=0.00016  Score=41.04  Aligned_cols=26  Identities=27%  Similarity=0.586  Sum_probs=19.4

Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhcC
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      +||.|.+  |++.|.....|..|++ .|.
T Consensus         1 k~~~C~~--C~k~f~~~~~l~~H~~-~H~   26 (29)
T 2lvt_A            1 KPCQCVM--CGKAFTQASSLIAHVR-QHT   26 (29)
Confidence            3688865  8888888888888875 454

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=96.86  E-value=0.00054  Score=37.92  Aligned_cols=21  Identities=29%  Similarity=0.537  Sum_probs=12.8

Q ss_pred             ccCCCCCccCCCchhhhhhhh
Q 025436           94 ASCSVCCRVYPTSRLLSIHVS  114 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~  114 (253)
                      |.|..|++.|.+...|..|++
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~   22 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQR   22 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGG
T ss_pred             ccCCCCCCcCCCHHHHHHHHH
Confidence            456666666666666666654

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=96.85  E-value=0.00071  Score=37.85  Aligned_cols=26  Identities=12%  Similarity=0.316  Sum_probs=19.3

Q ss_pred             cceEecCCCCCcccCChhHHHhhHhC
Q 025436           65 RRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        65 k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      ++|.|..+.|++.|.....|..|+++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~   26 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKI   26 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGG
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHH
Confidence            36788744588888888888888764

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=95.89  E-value=0.00017  Score=40.87  Aligned_cols=26  Identities=27%  Similarity=0.545  Sum_probs=19.5

Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhcC
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      +||.|.+  |++.|.....|..|++ .|.
T Consensus         2 k~~~C~~--C~k~f~~~~~l~~H~~-~h~   27 (30)
T 2lvr_A            2 KPYVCIH--CQRQFADPGALQRHVR-IHT   27 (30)
Confidence            5788865  8888888888888875 443

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=96.76  E-value=0.00081  Score=37.40  Aligned_cols=21  Identities=19%  Similarity=0.460  Sum_probs=15.0

Q ss_pred             ccCCCCCccCCCchhhhhhhh
Q 025436           94 ASCSVCCRVYPTSRLLSIHVS  114 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~  114 (253)
                      |.|..|++.|.+...|..|++
T Consensus         3 ~~C~~C~~~f~~~~~l~~H~~   23 (29)
T 2m0e_A            3 HKCPHCDKKFNQVGNLKAHLK   23 (29)
T ss_dssp             CCCSSCCCCCCTTTHHHHHHH
T ss_pred             CcCCCCCcccCCHHHHHHHHH
Confidence            567777777777777777765

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=96.75  E-value=0.00074  Score=37.89  Aligned_cols=21  Identities=24%  Similarity=0.567  Sum_probs=10.1

Q ss_pred             ccCCCCCccCCCchhhhhhhh
Q 025436           94 ASCSVCCRVYPTSRLLSIHVS  114 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~  114 (253)
                      |.|..|++.|.+...|..|+.
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~   23 (29)
T 1rik_A            3 FACPECPKRFMRSDHLTLHIL   23 (29)
T ss_dssp             EECSSSSCEESCSHHHHHHHT
T ss_pred             ccCCCCCchhCCHHHHHHHHH
Confidence            344444444444444444443

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=96.70  E-value=0.00054  Score=38.27  Aligned_cols=21  Identities=29%  Similarity=0.544  Sum_probs=10.2

Q ss_pred             ccCCCCCccCCCchhhhhhhh
Q 025436           94 ASCSVCCRVYPTSRLLSIHVS  114 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~  114 (253)
                      |.|..|++.|.+...|..|++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~   23 (29)
T 2m0f_A            3 LKCRECGKQFTTSGNLKRHLR   23 (29)
T ss_dssp             EECTTTSCEESCHHHHHHHHH
T ss_pred             ccCCCCCCccCChhHHHHHHH
Confidence            344445555555545544443

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=95.72  E-value=0.00026  Score=39.24  Aligned_cols=22  Identities=18%  Similarity=0.489  Sum_probs=12.6

Q ss_pred             ceEecCCCCCcccCChhHHHhhHh
Q 025436           66 RVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        66 ~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      ||.|..  |++.|.....|..|++
T Consensus         2 p~~C~~--C~k~f~~~~~l~~H~~   23 (26)
T 2lvu_A            2 PYVCER--CGKRFVQSSQLANHIR   23 (26)
Confidence            455555  5666655555555554

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=96.64  E-value=0.00096  Score=37.69  Aligned_cols=19  Identities=32%  Similarity=0.726  Sum_probs=12.1

Q ss_pred             ccCCCCCccCCCchhhhhh
Q 025436           94 ASCSVCCRVYPTSRLLSIH  112 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~H  112 (253)
                      |.|..|++.|.+...|..|
T Consensus         3 ~~C~~C~k~f~~~~~l~~H   21 (30)
T 1paa_A            3 YACGLCNRAFTRRDLLIRH   21 (30)
T ss_dssp             SBCTTTCCBCSSSHHHHHH
T ss_pred             cCCcccCcccCChHHHHHH
Confidence            5566666666666666666

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=95.54  E-value=0.0004  Score=39.27  Aligned_cols=23  Identities=13%  Similarity=0.400  Sum_probs=11.7

Q ss_pred             cceEecCCCCCcccCChhHHHhhHh
Q 025436           65 RRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        65 k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      +||.|..  |++.|.....|..|++
T Consensus         2 k~~~C~~--C~k~f~~~~~l~~H~~   24 (30)
T 2lvr_A            2 KPYVCIH--CQRQFADPGALQRHVR   24 (30)
Confidence            3455544  5555555555555543

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=95.40  E-value=0.00053  Score=38.72  Aligned_cols=21  Identities=24%  Similarity=0.630  Sum_probs=11.4

Q ss_pred             ccCCCCCccCCCchhhhhhhh
Q 025436           94 ASCSVCCRVYPTSRLLSIHVS  114 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~  114 (253)
                      |.|..|++.|.+...|..|++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~   23 (29)
T 2lvt_A            3 CQCVMCGKAFTQASSLIAHVR   23 (29)
Confidence            455555555555555555554

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.72  E-value=0.0041  Score=50.09  Aligned_cols=31  Identities=13%  Similarity=0.278  Sum_probs=28.0

Q ss_pred             ccccCCCcceEecCCCCCcccCChhHHHhhHhC
Q 025436           58 NMVTEDGRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        58 ~~~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      +..|+|+++|.|..  |++.|.+...|..|+++
T Consensus        42 ded~tGekpfyC~~--C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           42 DPDLPGGGLHRCLA--CARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             CSSSGGGGCSEETT--TTEECSSHHHHHHHTTC
T ss_pred             cccCCCCcceEccc--CcchhCCHHHHHHHHhh
Confidence            35688999999988  99999999999999976

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=93.68  E-value=0.016  Score=46.59  Aligned_cols=28  Identities=21%  Similarity=0.380  Sum_probs=25.4

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHh
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLV  154 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~  154 (253)
                      .++|+++|.|.+  |++.|.+...|..|++
T Consensus        44 d~tGekpfyC~~--C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           44 DLPGGGLHRCLA--CARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SSGGGGCSEETT--TTEECSSHHHHHHHTT
T ss_pred             cCCCCcceEccc--CcchhCCHHHHHHHHh
Confidence            378899999977  9999999999999986

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=93.49  E-value=0.032  Score=44.30  Aligned_cols=75  Identities=16%  Similarity=0.197  Sum_probs=49.9

Q ss_pred             cceEecCCCCCcccCChhHHHhhHhC-cCc-----ccCCCCCccCCC---chhhhhhhhhhcchhhhhhhhcCCCceecC
Q 025436           65 RRVCCPIVGCNARMRSLEEFEDHYNA-RHT-----ASCSVCCRVYPT---SRLLSIHVSEAHDSFFQAKVARGYPMYECL  135 (253)
Q Consensus        65 k~f~C~~~gC~k~F~s~~~L~~H~~~-~H~-----~~Cs~C~ksF~s---~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~  135 (253)
                      +++.|.+  |+..|.+...+..||.. .|.     +.+. |+...+.   ......+..          .+.+...|.|.
T Consensus        31 ~~~~C~~--C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~C~   97 (127)
T 1zu1_A           31 SDTQCKV--CSAVLISESQKLAHYQSRKHANKVRRYMAI-NQGEDSVPAKKFKAAPAEI----------SDGEDRSKCCP   97 (127)
T ss_dssp             CSSEETT--TTEECCSHHHHHHHHHCHHHHHHHHHHHHH-TTCCCCCSCCCCSCCSSCC----------SSCCCTTTEET
T ss_pred             CCCcCcC--CCCEeCCHHHHHHHHCcHHHHHHHHHHhcc-cCcccCCCCCccCCCcccc----------ccCCCCCeEcC
Confidence            5799999  99999999999999953 242     3332 2211110   000011111          23456789997


Q ss_pred             ccccCCcCCChhHHHhHHh
Q 025436          136 VEGCGLKFKNYKSRQQHLV  154 (253)
Q Consensus       136 vegC~kkF~t~~~rk~Hl~  154 (253)
                      +  |++.|.+...+..|+.
T Consensus        98 ~--C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           98 V--CNMTFSSPVVAESHYI  114 (127)
T ss_dssp             T--TTEECSSHHHHHHHHT
T ss_pred             C--CCCEeCCHHHHHHHHC
Confidence            7  9999999999999985

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=92.14  E-value=0.12  Score=36.19  Aligned_cols=35  Identities=17%  Similarity=0.250  Sum_probs=29.8

Q ss_pred             eecCccccCCcCCChhHHHhHHhhhcCCCC------ccccc
Q 025436          132 YECLVEGCGLKFKNYKSRQQHLVDKHKFPT------SFEFF  166 (253)
Q Consensus       132 y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~------~f~f~  166 (253)
                      |.|...+|++.|.+...|..|+...|...+      +|.|.
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~   42 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACN   42 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECC
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEee
Confidence            679999999999999999999977887554      67776

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=90.83  E-value=0.32  Score=39.54  Aligned_cols=80  Identities=23%  Similarity=0.442  Sum_probs=57.8

Q ss_pred             cceEecCCCCCcccCChhHHHhhHhC--cCcccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCc
Q 025436           65 RRVCCPIVGCNARMRSLEEFEDHYNA--RHTASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLK  142 (253)
Q Consensus        65 k~f~C~~~gC~k~F~s~~~L~~H~~~--~H~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kk  142 (253)
                      -.+.|+-.||+..+ .+.+|+.|+..  .....|..|+..+ ....|..|+..          .=..++-.|..  |+..
T Consensus        81 l~v~C~n~GC~~~~-~~~~l~~H~~~C~~~~v~C~~C~~~~-~r~~l~~H~~~----------~C~~r~~~C~~--C~~~  146 (170)
T 3hcs_A           81 LMVKCPNEGCLHKM-ELRHLEDHQAHCEFALMDCPQCQRPF-QKFHINIHILK----------DCPRRQVSCDN--CAAS  146 (170)
T ss_dssp             SEEECCSTTCCCEE-EGGGHHHHHTTCTTSEEECTTTCCEE-EGGGHHHHHHH----------TCTTCEEECTT--TCCE
T ss_pred             cccCCCCCCCCcee-cHhHHHHHHhcCCceeeECCCCChHH-HHHHHHHHhhh----------hCCCCCeECCC--CCCc
Confidence            45789878999876 47889999853  2346899999988 56678888842          12456788965  9998


Q ss_pred             CCChhHHHhHHhhhcCCC
Q 025436          143 FKNYKSRQQHLVDKHKFP  160 (253)
Q Consensus       143 F~t~~~rk~Hl~~~H~~p  160 (253)
                      +. ..++..|. .++.+.
T Consensus       147 ~~-~~~l~~H~-~~~~~~  162 (170)
T 3hcs_A          147 MA-FEDKEIHD-QNCPLA  162 (170)
T ss_dssp             EE-GGGHHHHH-TTCCC-
T ss_pred             cC-HHHHHhHH-HhCcCh
Confidence            84 46788997 466544

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=89.24  E-value=0.17  Score=31.87  Aligned_cols=24  Identities=38%  Similarity=0.746  Sum_probs=18.2

Q ss_pred             eEecCCCCCcccCChhHHHhhHhCcC
Q 025436           67 VCCPIVGCNARMRSLEEFEDHYNARH   92 (253)
Q Consensus        67 f~C~~~gC~k~F~s~~~L~~H~~~~H   92 (253)
                      |.|++  |.+.|.+...|..||...|
T Consensus         6 FiCP~--C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            6 FICPQ--CMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EECTT--TCCEESSHHHHHHHHHHHT
T ss_pred             cCCcH--HHHHcCCHHHHHHHHHhcc
Confidence            77877  8888888888888876544

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=88.61  E-value=0.14  Score=32.04  Aligned_cols=23  Identities=35%  Similarity=0.765  Sum_probs=14.3

Q ss_pred             CCCCCccCCCchhhhhhhhhhcc
Q 025436           96 CSVCCRVYPTSRLLSIHVSEAHD  118 (253)
Q Consensus        96 Cs~C~ksF~s~~~L~~Hi~e~Hd  118 (253)
                      |..|.+.|..-.+|..||++.||
T Consensus        12 crfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           12 CRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             ETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcC
Confidence            55566666666666666666665

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=84.62  E-value=0.44  Score=32.21  Aligned_cols=20  Identities=20%  Similarity=0.453  Sum_probs=10.1

Q ss_pred             ccCCCCCccCCCchhhhhhh
Q 025436           94 ASCSVCCRVYPTSRLLSIHV  113 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi  113 (253)
                      |.|+.|++.|.....|..|+
T Consensus        13 ~~CPrCn~~f~~~~sLr~Hm   32 (49)
T 2e72_A           13 KICPRCNAQFRVTEALRGHM   32 (49)
T ss_dssp             CCCTTTCCCCSSHHHHHHHH
T ss_pred             eeCCcccccccchHHHHhhh
Confidence            44555555555555555554

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=80.07  E-value=1.3  Score=29.86  Aligned_cols=34  Identities=18%  Similarity=0.324  Sum_probs=25.9

Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      -.|.|+-  |+..|.-...|+.||+  +--|.-..|..
T Consensus        11 ~~~~CPr--Cn~~f~~~~sLr~Hmk--ycCp~~v~~~~   44 (49)
T 2e72_A           11 GRKICPR--CNAQFRVTEALRGHMC--YCCPEMVEYQS   44 (49)
T ss_dssp             SCCCCTT--TCCCCSSHHHHHHHHH--HHCTTTCCCCC
T ss_pred             CceeCCc--ccccccchHHHHhhhh--hcCcchhhhhc
Confidence            5799977  9999999999999996  33444444443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	253
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.14
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	98.92
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.67
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.64
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.58
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.57
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.55
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.49
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.47
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.47
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.45
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.45
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.44
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.41
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.4
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.4
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.35
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.34
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.32
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.28
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.28
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.27
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.25
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.23
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.23
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.22
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.22
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.21
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.19
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.13
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.12
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	98.12
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.1
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.09
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.04
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	97.99
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	97.99
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.81
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.8
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.78
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	97.75
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.74
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	97.49
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	97.45
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.42
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.29
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.27
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.15
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.93
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.86
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.85
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.75
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.53
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	96.45
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.45
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.34
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.25
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.15
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.14
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.75
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.34
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	95.25
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	95.24
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	95.18
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	94.82
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.69
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	94.66
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.59
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	94.58
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.39
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.05
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.0
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	93.95
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.77
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	93.73
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	93.66
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	93.55
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	93.42
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	93.28
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.09
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	92.82
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	92.72
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	92.67
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.61
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	92.61
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.43
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	92.19
d1x3ca1	61	Zinc finger protein 292, ZNF292 {Human (Homo sapie	92.16
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	92.13
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	92.11
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	91.77
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	91.77
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	91.49
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	90.74
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	90.08
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	89.57
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	89.42
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	87.52
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	87.46
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	87.4
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	87.17
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	87.02
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	86.27
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	86.08
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	84.66
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	84.31
d2glia1	32	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	84.23
d1x3ca1	61	Zinc finger protein 292, ZNF292 {Human (Homo sapie	83.68
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	82.63
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	82.2

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=9.6e-12  Score=84.13  Aligned_cols=51  Identities=29%  Similarity=0.512  Sum_probs=41.1

Q ss_pred             cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHhhhc
Q 025436           93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKH  157 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H  157 (253)
                      .|.| .||++|.+...|..|++          .|+|++||.|.+  ||+.|.....|..|++ +|
T Consensus         3 ~y~C-~Cgk~F~~~~~l~~H~~----------~Ht~ekpy~C~~--C~k~F~~~~~L~~H~r-~H   53 (53)
T d2csha1           3 LYPC-QCGKSFTHKSQRDRHMS----------MHLGLRPYGCGV--CGKKFKMKHHLVGHMK-IH   53 (53)
T ss_dssp             CEEC-TTSCEESSHHHHHHHHH----------HHSCCCSEECTT--TSCEESSSHHHHHHHT-TT
T ss_pred             CCCC-CCCCeECCHHHhHHHhh----------ccccccCCcCCC--cCCEecCHHHHHHHHh-cC
Confidence            4677 37777777777777775          478999999977  9999999999999985 54

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=1.9e-10  Score=77.52  Aligned_cols=48  Identities=19%  Similarity=0.416  Sum_probs=43.8

Q ss_pred             CcceEecCCCCCcccCChhHHHhhHhCcC----cccCCCCCccCCCchhhhhhhhh
Q 025436           64 GRRVCCPIVGCNARMRSLEEFEDHYNARH----TASCSVCCRVYPTSRLLSIHVSE  115 (253)
Q Consensus        64 ~k~f~C~~~gC~k~F~s~~~L~~H~~~~H----~~~Cs~C~ksF~s~~~L~~Hi~e  115 (253)
                      |+||.| .  ||++|.....|..|+++ |    .|.|.+|+++|.+...|..|++.
T Consensus         1 EK~y~C-~--Cgk~F~~~~~l~~H~~~-Ht~ekpy~C~~C~k~F~~~~~L~~H~r~   52 (53)
T d2csha1           1 DKLYPC-Q--CGKSFTHKSQRDRHMSM-HLGLRPYGCGVCGKKFKMKHHLVGHMKI   52 (53)
T ss_dssp             CCCEEC-T--TSCEESSHHHHHHHHHH-HSCCCSEECTTTSCEESSSHHHHHHHTT
T ss_pred             CcCCCC-C--CCCeECCHHHhHHHhhc-cccccCCcCCCcCCEecCHHHHHHHHhc
Confidence            589999 4  99999999999999975 5    39999999999999999999864

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=6.9e-09  Score=66.47  Aligned_cols=37  Identities=19%  Similarity=0.266  Sum_probs=30.4

Q ss_pred             CCceecCccccCCcCCChhHHHhHHhhhcCCCCcccccc
Q 025436          129 YPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFFK  167 (253)
Q Consensus       129 ek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~~  167 (253)
                      ++||+|.+  ||+.|....+|++|++.+|...++|.|++
T Consensus         3 ~Kpy~C~~--Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           3 GKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SCCEECSS--SCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCccCCC--CCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            57888855  88888888888888877888888888874

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.64  E-value=3.9e-09  Score=70.20  Aligned_cols=43  Identities=23%  Similarity=0.344  Sum_probs=36.7

Q ss_pred             hhhhhhhhhhcchhhhhhhhcCCCceecCccccCCcCCChhHHHhHHhhhcCCCC
Q 025436          107 RLLSIHVSEAHDSFFQAKVARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKFPT  161 (253)
Q Consensus       107 ~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~  161 (253)
                      ..|+.|+.           |.|++||.|.++||++.|+.+++|+.|++ +|++.+
T Consensus         5 ~~l~~h~~-----------h~gekpy~C~~~~C~k~F~~~~~L~~H~r-~Htgek   47 (47)
T d1ncsa_           5 GSIDKYVK-----------EMPDKTFECLFPGCTKTFKRRYNIRSHIQ-THLEDR   47 (47)
T ss_dssp             SSGGGSCE-----------EETTTEEECCCTTCCCEECSSSSHHHHHH-HHTTTC
T ss_pred             chhcchhh-----------ccCCCCeECCcCCCCccccCchHHHhhcc-cccCCC
Confidence            46777774           67999999999999999999999999985 887653

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.58  E-value=1e-08  Score=64.51  Aligned_cols=33  Identities=27%  Similarity=0.601  Sum_probs=30.0

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      .|+|++||+|.+  |++.|+.+.+|+.|++.+|..
T Consensus         2 ~HTgekP~~C~~--C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           2 THSGEKPYECYI--CHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCSCCCSEECTT--TCCEESCHHHHHHHHHHHSSS
T ss_pred             ccCCCCCEeCCC--CcccccchHHHHHHcccccCC
Confidence            589999999977  999999999999999888863

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=1.7e-08  Score=61.54  Aligned_cols=31  Identities=23%  Similarity=0.356  Sum_probs=28.0

Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhcCCCC
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKHKFPT  161 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~  161 (253)
                      +||.|+++||+++|+.+++|+.|++ +|+..+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r-~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKR-THTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHT-TTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcC-cccccC
Confidence            5899999999999999999999995 788754

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=9.3e-09  Score=65.85  Aligned_cols=35  Identities=20%  Similarity=0.378  Sum_probs=25.4

Q ss_pred             cccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecCc
Q 025436           93 TASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECLV  136 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~v  136 (253)
                      .|.|++||++|.+...|..|++.         .|+|++||+|.|
T Consensus         5 py~C~~Cgk~F~~~~~L~~H~r~---------~Ht~ekpy~C~i   39 (39)
T d2epsa1           5 PYICQSCGKGFSRPDHLNGHIKQ---------VHTSERPHKCQV   39 (39)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHH---------TSCCCCCCCSSS
T ss_pred             CccCCCCCCCcCChHHhhccCcC---------ccCCCcCcCCcC
Confidence            46677777777777777777653         368999999964

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.49  E-value=2.2e-08  Score=60.59  Aligned_cols=29  Identities=28%  Similarity=0.527  Sum_probs=26.6

Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      +||.|.++||+++|+.+++|++|++ +|++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r-~HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVR-IHTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHH-HHHC
T ss_pred             CCccCCCCCCCceECcHHHcCcccc-ccCC
Confidence            5899999999999999999999985 7765

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.47  E-value=3.7e-08  Score=60.43  Aligned_cols=29  Identities=24%  Similarity=0.405  Sum_probs=26.7

Q ss_pred             CCceecCccccCCcCCChhHHHhHHhhhcC
Q 025436          129 YPMYECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       129 ek~y~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      |+||.|.++||+++|+...+|++|++ +|.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r-~Ht   29 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKK-SHQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHG-GGT
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhh-hcc
Confidence            58999999999999999999999985 775

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=4.1e-08  Score=59.37  Aligned_cols=29  Identities=24%  Similarity=0.471  Sum_probs=26.6

Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      +||.|.++||++.|+.+++|++|++ +|++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r-~HtG   29 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLR-SHTG   29 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHH-HTTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcC-cCcC
Confidence            5899999999999999999999985 8875

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=3e-08  Score=62.34  Aligned_cols=34  Identities=21%  Similarity=0.393  Sum_probs=27.6

Q ss_pred             eecCccccCCcCCChhHHHhHHhhhcCCCCccccc
Q 025436          132 YECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFEFF  166 (253)
Q Consensus       132 y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~f~  166 (253)
                      |.|.++||++.|..+..|++|++ +|+..++|.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r-~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMK-LHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHH-HHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccC-eeCCCCCEeCC
Confidence            77888888888888888888875 68888888775

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=4e-08  Score=61.64  Aligned_cols=31  Identities=23%  Similarity=0.431  Sum_probs=27.7

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhc
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKH  157 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H  157 (253)
                      .|+|++||+|.+  ||+.|...++|+.|++.+|
T Consensus         2 ~HTgekPy~C~~--C~k~F~~~~~L~~H~r~H~   32 (36)
T d1x6ha2           2 THTGEKPYACSH--CDKTFRQKQLLDMHFKRYH   32 (36)
T ss_dssp             TCCCCCCEECSS--SSCEESSHHHHHHHHHHTT
T ss_pred             CCCCCCCEECCC--CCCCcCCHhHHHHhCcccC
Confidence            589999999977  9999999999999997444

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=2.9e-08  Score=59.14  Aligned_cols=27  Identities=30%  Similarity=0.701  Sum_probs=25.0

Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhc
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKH  157 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H  157 (253)
                      +||.|.++|||++|+++++|++|++ .|
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r-~H   27 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHIL-TH   27 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHH-HH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHh-hc
Confidence            5899999999999999999999996 55

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.41  E-value=3.6e-08  Score=59.18  Aligned_cols=28  Identities=29%  Similarity=0.583  Sum_probs=25.7

Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhcC
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      +||+|.++||+++|+++++|++|++ +|+
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r-~Ht   28 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIR-IHT   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTH-HHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcC-ccC
Confidence            5899999999999999999999985 665

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.40  E-value=7.7e-08  Score=60.07  Aligned_cols=31  Identities=23%  Similarity=0.384  Sum_probs=28.1

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      |+|++||+|.+  |++.|+.+.+|+.|++ +|..
T Consensus         2 ~TGekPy~C~~--C~k~F~~~~~L~~H~r-~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRI--CLSAFTTKANCARHLK-VHTD   32 (35)
T ss_dssp             CSCCSCEECSS--SCCEESSHHHHHHHHG-GGTS
T ss_pred             CCCCccccCCC--CCCcccChHHHHHHcc-ccCC
Confidence            68999999977  9999999999999985 7864

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=5.7e-08  Score=61.00  Aligned_cols=32  Identities=22%  Similarity=0.438  Sum_probs=19.5

Q ss_pred             ccCCC--CCccCCCchhhhhhhhhhcchhhhhhhhcCCCceecC
Q 025436           94 ASCSV--CCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYECL  135 (253)
Q Consensus        94 ~~Cs~--C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~C~  135 (253)
                      |.|+.  |+++|.++..|..|++          .|+|++||+|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r----------~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMK----------LHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHH----------HHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccC----------eeCCCCCEeCC
Confidence            34443  5555555555555554          37899999995

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=1.1e-07  Score=58.54  Aligned_cols=31  Identities=29%  Similarity=0.413  Sum_probs=28.0

Q ss_pred             hcCCCceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436          126 ARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       126 h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      |+|++||.|.+  ||+.|...++|..|++ +|+.
T Consensus         2 HTgekpy~C~~--Cgk~F~~~~~L~~H~r-~Htg   32 (33)
T d1x6ea1           2 HSGEKPYGCVE--CGKAFSRSSILVQHQR-VHTG   32 (33)
T ss_dssp             TTTCCCEECSS--SCCEESSHHHHHHHHH-GGGC
T ss_pred             cCCCCCeeCCC--CCCEeCchHHhHhhcc-ccCC
Confidence            78999999966  9999999999999985 7765

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=8.6e-08  Score=60.10  Aligned_cols=31  Identities=23%  Similarity=0.413  Sum_probs=28.3

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhCcC
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNARH   92 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H   92 (253)
                      .|+|++||.|++  |+++|+...+|+.|++..|
T Consensus         2 ~HTgekP~~C~~--C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           2 THSGEKPYECYI--CHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCSCCCSEECTT--TCCEESCHHHHHHHHHHHS
T ss_pred             ccCCCCCEeCCC--CcccccchHHHHHHccccc
Confidence            699999999988  9999999999999987655

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.32  E-value=1e-07  Score=58.35  Aligned_cols=27  Identities=19%  Similarity=0.412  Sum_probs=25.4

Q ss_pred             CcceEecCCCCCcccCChhHHHhhHhC
Q 025436           64 GRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        64 ~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      ++||.|+++||+++|+...+|.+|+++
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~   27 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKS   27 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGG
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhh
Confidence            589999999999999999999999975

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=6.4e-08  Score=57.62  Aligned_cols=26  Identities=27%  Similarity=0.649  Sum_probs=24.3

Q ss_pred             cceEecCCCCCcccCChhHHHhhHhC
Q 025436           65 RRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        65 k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      +||.|+++||+++|+...+|+.|+++
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~   26 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILT   26 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHH
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhh
Confidence            68999999999999999999999975

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.28  E-value=1.8e-07  Score=58.31  Aligned_cols=30  Identities=23%  Similarity=0.492  Sum_probs=27.5

Q ss_pred             cCCCcceEecCCCCCcccCChhHHHhhHhCcCc
Q 025436           61 TEDGRRVCCPIVGCNARMRSLEEFEDHYNARHT   93 (253)
Q Consensus        61 h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H~   93 (253)
                      |+|++||.|.+  |+++|....+|..|+++ |+
T Consensus         2 ~TGekPy~C~~--C~k~F~~~~~L~~H~r~-Ht   31 (35)
T d1srka_           2 SSGKRPFVCRI--CLSAFTTKANCARHLKV-HT   31 (35)
T ss_dssp             CSCCSCEECSS--SCCEESSHHHHHHHHGG-GT
T ss_pred             CCCCccccCCC--CCCcccChHHHHHHccc-cC
Confidence            78999999999  99999999999999974 64

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.27  E-value=1.9e-07  Score=58.74  Aligned_cols=31  Identities=19%  Similarity=0.370  Sum_probs=27.9

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcC
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      .|+|++||+|.+  |+++|+.+.+|+.|++ +|.
T Consensus         5 ~HTgeKPy~C~~--C~k~F~~~~~L~~H~r-~H~   35 (37)
T d1p7aa_           5 GSTGIKPFQCPD--CDRSFSRSDHLALHRK-RHM   35 (37)
T ss_dssp             TTCCSSSBCCTT--TCCCBSSHHHHHHHHG-GGT
T ss_pred             ccCCccCeEeCC--CCCEecCHHHHHHHHh-cCc
Confidence            589999999977  9999999999999985 664

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=2e-07  Score=58.28  Aligned_cols=31  Identities=16%  Similarity=0.468  Sum_probs=28.0

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhCcC
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNARH   92 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H   92 (253)
                      .|+|++||.|.+  |+++|....+|..|+++++
T Consensus         2 ~HTgekPy~C~~--C~k~F~~~~~L~~H~r~H~   32 (36)
T d1x6ha2           2 THTGEKPYACSH--CDKTFRQKQLLDMHFKRYH   32 (36)
T ss_dssp             TCCCCCCEECSS--SSCEESSHHHHHHHHHHTT
T ss_pred             CCCCCCCEECCC--CCCCcCCHhHHHHhCcccC
Confidence            689999999998  9999999999999998643

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=1.8e-07  Score=56.45  Aligned_cols=26  Identities=23%  Similarity=0.565  Sum_probs=23.6

Q ss_pred             cceEecCCCCCcccCChhHHHhhHhC
Q 025436           65 RRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        65 k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      +||.|+++||+++|....+|+.|+++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~   26 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRS   26 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHH
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCc
Confidence            58999999999999999999999975

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=1.5e-07  Score=56.73  Aligned_cols=26  Identities=19%  Similarity=0.413  Sum_probs=24.2

Q ss_pred             cceEecCCCCCcccCChhHHHhhHhC
Q 025436           65 RRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        65 k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      +||.|+++||+++|....+|+.|+++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~   26 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRI   26 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHH
T ss_pred             CCccCCCCCCCceECcHHHcCccccc
Confidence            68999999999999999999999975

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=2.8e-07  Score=55.97  Aligned_cols=28  Identities=29%  Similarity=0.549  Sum_probs=24.9

Q ss_pred             cceEecCCCCCcccCChhHHHhhHhCcCc
Q 025436           65 RRVCCPIVGCNARMRSLEEFEDHYNARHT   93 (253)
Q Consensus        65 k~f~C~~~gC~k~F~s~~~L~~H~~~~H~   93 (253)
                      +||.|+++||+++|+...+|..|+++ |+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~-Ht   28 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRT-HT   28 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTT-TS
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCc-cc
Confidence            58999999999999999999999975 53

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.22  E-value=1.5e-07  Score=56.42  Aligned_cols=26  Identities=23%  Similarity=0.640  Sum_probs=24.4

Q ss_pred             cceEecCCCCCcccCChhHHHhhHhC
Q 025436           65 RRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        65 k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      +||.|+++||+++|++..+|..|+++
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~   26 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRI   26 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCc
Confidence            68999999999999999999999974

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=2.8e-07  Score=58.21  Aligned_cols=32  Identities=25%  Similarity=0.395  Sum_probs=28.5

Q ss_pred             hhcCCCceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436          125 VARGYPMYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       125 ~h~gek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      .|++++||.|.+  ||+.|...++|..|++ +|++
T Consensus         6 ~Ht~ekpy~C~~--CgK~F~~~s~L~~H~r-~HtG   37 (38)
T d2cota2           6 QQRERRRYKCDE--CGKSFSHSSDLSKHRR-THTG   37 (38)
T ss_dssp             CCCCSCSSBCSS--SCCBCSCHHHHHHHHT-TTCC
T ss_pred             ccCCCCCEecCC--CCceeeCHHHHHHhCc-cCCC
Confidence            478999999966  9999999999999985 7875

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=3.7e-07  Score=56.14  Aligned_cols=29  Identities=10%  Similarity=0.245  Sum_probs=26.7

Q ss_pred             ccCCCcceEecCCCCCcccCChhHHHhhHhC
Q 025436           60 VTEDGRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        60 ~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      .|+|++||.|..  |+++|....+|..|+++
T Consensus         1 IHTgekpy~C~~--Cgk~F~~~~~L~~H~r~   29 (33)
T d1x6ea1           1 IHSGEKPYGCVE--CGKAFSRSSILVQHQRV   29 (33)
T ss_dssp             TTTTCCCEECSS--SCCEESSHHHHHHHHHG
T ss_pred             CcCCCCCeeCCC--CCCEeCchHHhHhhccc
Confidence            489999999988  99999999999999975

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.13  E-value=4.3e-07  Score=53.93  Aligned_cols=27  Identities=19%  Similarity=0.466  Sum_probs=23.9

Q ss_pred             CCceecCccccCCcCCChhHHHhHHhhhcC
Q 025436          129 YPMYECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       129 ek~y~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      |+||+|.+  |++.|+.+.+|++|++ +|+
T Consensus         1 EKPy~C~~--C~k~F~~~~~L~~H~r-~HT   27 (28)
T d1a1ia2           1 QKPFQCRI--CMRNFSRSDHLTTHIR-THT   27 (28)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHH-HHH
T ss_pred             CcCccCCC--CcCEecccccccccCC-Ccc
Confidence            68999977  9999999999999986 665

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.12  E-value=7.4e-07  Score=53.21  Aligned_cols=29  Identities=21%  Similarity=0.398  Sum_probs=23.8

Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhcCCCC
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKHKFPT  161 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~  161 (253)
                      +||+|.+  |++.|+.++.|++|++ +|++++
T Consensus         1 kp~~C~~--C~k~F~~~~~L~~H~r-~HTgEK   29 (29)
T d2adra1           1 RSFVCEV--CTRAFARQEHLKRHYR-SHTNEK   29 (29)
T ss_dssp             CCBCCTT--TCCCBSCHHHHHHHHH-TTTSSC
T ss_pred             CcCCCCC--CCCCCCCchHcccccC-cccCCC
Confidence            5899977  9999999999999985 787653

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=98.12  E-value=6.9e-07  Score=52.21  Aligned_cols=25  Identities=32%  Similarity=0.527  Sum_probs=23.8

Q ss_pred             CceecCccccCCcCCChhHHHhHHh
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLV  154 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~  154 (253)
                      .||.|+.|||+++|+.++.|++|.+
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhek   26 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEK   26 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhh
Confidence            5899999999999999999999986

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.10  E-value=2.9e-07  Score=60.91  Aligned_cols=32  Identities=13%  Similarity=0.333  Sum_probs=29.2

Q ss_pred             cccCCCcceEecCCCCCcccCChhHHHhhHhC
Q 025436           59 MVTEDGRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        59 ~~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      +.|+|++||.|.++||+++|....+|..|+++
T Consensus        11 ~~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~   42 (47)
T d1ncsa_          11 VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQT   42 (47)
T ss_dssp             CEEETTTEEECCCTTCCCEECSSSSHHHHHHH
T ss_pred             hhccCCCCeECCcCCCCccccCchHHHhhccc
Confidence            35889999999999999999999999999975

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.09  E-value=7e-07  Score=56.05  Aligned_cols=30  Identities=13%  Similarity=0.272  Sum_probs=27.6

Q ss_pred             cccCCCcceEecCCCCCcccCChhHHHhhHhC
Q 025436           59 MVTEDGRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        59 ~~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      ..|+|++||.|.+  |+++|....+|..|+++
T Consensus         4 R~HTgeKPy~C~~--C~k~F~~~~~L~~H~r~   33 (37)
T d1p7aa_           4 RGSTGIKPFQCPD--CDRSFSRSDHLALHRKR   33 (37)
T ss_dssp             STTCCSSSBCCTT--TCCCBSSHHHHHHHHGG
T ss_pred             CccCCccCeEeCC--CCCEecCHHHHHHHHhc
Confidence            4799999999988  99999999999999974

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=1.2e-06  Score=51.90  Aligned_cols=29  Identities=24%  Similarity=0.551  Sum_probs=27.1

Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhcC
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      +||.|.++||+++++.+++|+.|++.+|+
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            58999999999999999999999988774

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=1.6e-06  Score=54.55  Aligned_cols=30  Identities=17%  Similarity=0.382  Sum_probs=26.6

Q ss_pred             cccCCCcceEecCCCCCcccCChhHHHhhHhC
Q 025436           59 MVTEDGRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        59 ~~h~~~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      ..|++++||.|..  ||++|....+|..|+++
T Consensus         5 ~~Ht~ekpy~C~~--CgK~F~~~s~L~~H~r~   34 (38)
T d2cota2           5 WQQRERRRYKCDE--CGKSFSHSSDLSKHRRT   34 (38)
T ss_dssp             SCCCCSCSSBCSS--SCCBCSCHHHHHHHHTT
T ss_pred             cccCCCCCEecCC--CCceeeCHHHHHHhCcc
Confidence            4789999999988  99999999999999875

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=1.8e-06  Score=51.47  Aligned_cols=28  Identities=18%  Similarity=0.426  Sum_probs=21.9

Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhcCCC
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKHKFP  160 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p  160 (253)
                      +||.|.+  ||+.|+.++.|.+|++ +|+..
T Consensus         1 Kpy~C~~--C~k~F~~~s~L~~H~r-~Htge   28 (29)
T d1sp1a_           1 KKFACPE--CPKRFMRSDHLSKHIK-THQNK   28 (29)
T ss_dssp             CCSCCTT--TTCCCSCSHHHHHHHH-GGGCC
T ss_pred             CCEECCc--CCCeecchHHhhhhcC-ccCCc
Confidence            5788866  8888888888888875 67654

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.81  E-value=2.6e-06  Score=50.43  Aligned_cols=25  Identities=16%  Similarity=0.433  Sum_probs=20.3

Q ss_pred             CcceEecCCCCCcccCChhHHHhhHhC
Q 025436           64 GRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        64 ~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      ++||.|++  |+++|....+|..|+++
T Consensus         1 EKPy~C~~--C~k~F~~~~~L~~H~r~   25 (28)
T d1a1ia2           1 QKPFQCRI--CMRNFSRSDHLTTHIRT   25 (28)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHH
T ss_pred             CcCccCCC--CcCEecccccccccCCC
Confidence            47888877  88888888888888864

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.80  E-value=4.4e-06  Score=49.70  Aligned_cols=21  Identities=29%  Similarity=0.602  Sum_probs=11.9

Q ss_pred             ccCCCCCccCCCchhhhhhhh
Q 025436           94 ASCSVCCRVYPTSRLLSIHVS  114 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~  114 (253)
                      |.|++|+++|.....|..|++
T Consensus         3 ~~C~~C~k~F~~~~~L~~H~r   23 (29)
T d2adra1           3 FVCEVCTRAFARQEHLKRHYR   23 (29)
T ss_dssp             BCCTTTCCCBSCHHHHHHHHH
T ss_pred             CCCCCCCCCCCCchHcccccC
Confidence            455555555555555555554

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.78  E-value=6.1e-06  Score=48.17  Aligned_cols=27  Identities=30%  Similarity=0.584  Sum_probs=24.0

Q ss_pred             CCceecCccccCCcCCChhHHHhHHhhhcC
Q 025436          129 YPMYECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       129 ek~y~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      |+||.|.+  ||++|+.+..+++|.+ +|.
T Consensus         1 EkPf~C~~--CgrkFArsderkRH~k-iH~   27 (28)
T d1a1ia3           1 EKPFACDI--CGRKFARSDERKRHTK-IHL   27 (28)
T ss_dssp             CCCEECTT--TCCEESSHHHHHHHHG-GGC
T ss_pred             CCCcccch--hhhhhhcchhhhhhhh-hcc
Confidence            58999977  9999999999999985 663

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=7.7e-06  Score=48.65  Aligned_cols=22  Identities=27%  Similarity=0.513  Sum_probs=16.1

Q ss_pred             cccCCCCCccCCCchhhhhhhh
Q 025436           93 TASCSVCCRVYPTSRLLSIHVS  114 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~  114 (253)
                      .|.|.+|+++|..+..|..|++
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r   23 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIK   23 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHH
T ss_pred             CEECCcCCCeecchHHhhhhcC
Confidence            3677777777777777777776

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=6e-06  Score=49.25  Aligned_cols=30  Identities=33%  Similarity=0.550  Sum_probs=27.2

Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      +||.|.++||.+.|++.++|-.|.-+.|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            589999999999999999999998778753

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=1.8e-05  Score=45.96  Aligned_cols=25  Identities=32%  Similarity=0.600  Sum_probs=21.5

Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhc
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKH  157 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H  157 (253)
                      +||.|..  ||+.|..++.|..|.+ +|
T Consensus         1 KPy~C~e--CgK~F~~~s~L~~Hqr-iH   25 (26)
T d1x6ea2           1 KPYKCLE--CGKAFSQNSGLINHQR-IH   25 (26)
T ss_dssp             CCEECSS--SCCEESSHHHHHHHHH-HH
T ss_pred             CCccCCC--CcCeeccCcccccCcc-CC
Confidence            5899955  9999999999999985 65

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=1.7e-05  Score=46.02  Aligned_cols=24  Identities=13%  Similarity=0.260  Sum_probs=18.5

Q ss_pred             cceEecCCCCCcccCChhHHHhhHhC
Q 025436           65 RRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        65 k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      +||.|..  ||++|.....|..|.++
T Consensus         1 KPy~C~e--CgK~F~~~s~L~~Hqri   24 (26)
T d1x6ea2           1 KPYKCLE--CGKAFSQNSGLINHQRI   24 (26)
T ss_dssp             CCEECSS--SCCEESSHHHHHHHHHH
T ss_pred             CCccCCC--CcCeeccCcccccCccC
Confidence            5788877  88888888888888764

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=3.3e-05  Score=45.50  Aligned_cols=28  Identities=21%  Similarity=0.559  Sum_probs=25.9

Q ss_pred             cceEecCCCCCcccCChhHHHhhHhCcC
Q 025436           65 RRVCCPIVGCNARMRSLEEFEDHYNARH   92 (253)
Q Consensus        65 k~f~C~~~gC~k~F~s~~~L~~H~~~~H   92 (253)
                      +||.|.++||++++...+.|..|+...|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            6899999999999999999999998666

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=3.6e-05  Score=45.81  Aligned_cols=29  Identities=21%  Similarity=0.470  Sum_probs=25.5

Q ss_pred             cceEecCCCCCcccCChhHHHhhHhCcCc
Q 025436           65 RRVCCPIVGCNARMRSLEEFEDHYNARHT   93 (253)
Q Consensus        65 k~f~C~~~gC~k~F~s~~~L~~H~~~~H~   93 (253)
                      +||.|+++||.|+|++..+--.|.+..|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            68999999999999999999999854453

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.27  E-value=6.7e-05  Score=46.83  Aligned_cols=28  Identities=21%  Similarity=0.520  Sum_probs=25.5

Q ss_pred             CCcceEecCCCCCcccCChhHHHhhHhC
Q 025436           63 DGRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        63 ~~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      +++||.|..+||+++|.+-..|..|...
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~K   30 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHK   30 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhh
Confidence            4799999999999999999999999753

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.15  E-value=9.6e-05  Score=42.91  Aligned_cols=26  Identities=23%  Similarity=0.477  Sum_probs=23.8

Q ss_pred             cceEecCCCCCcccCChhHHHhhHhC
Q 025436           65 RRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        65 k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      .||.|++.||++.|+....|++|-.+
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekv   27 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKV   27 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhc
Confidence            48999999999999999999999753

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.00012  Score=44.22  Aligned_cols=30  Identities=20%  Similarity=0.472  Sum_probs=19.8

Q ss_pred             ccCCCCCccCCCchhhhhhhhhhcchhhhhhhhcCCCcee
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSEAHDSFFQAKVARGYPMYE  133 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e~Hd~~f~~~~h~gek~y~  133 (253)
                      ..|+.|||.|.....|++|..          .|.+++||.
T Consensus         6 ~~ce~cgk~frdvyhlnrhkl----------shs~ekpys   35 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKL----------SHSGEKPYS   35 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGG----------GSCSCCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhc----------ccCCCCCCC
Confidence            456667777777777777664          356777773

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.86  E-value=0.00027  Score=41.71  Aligned_cols=26  Identities=35%  Similarity=0.668  Sum_probs=23.1

Q ss_pred             CCceecCccccCCcCCChhHHHhHHhhh
Q 025436          129 YPMYECLVEGCGLKFKNYKSRQQHLVDK  156 (253)
Q Consensus       129 ek~y~C~vegC~kkF~t~~~rk~Hl~~~  156 (253)
                      ++||+|++  |..+|+.+..+..|++.+
T Consensus         1 ekp~~cpi--c~qrfkrkdrmsyhvrsh   26 (32)
T d2epqa1           1 EKPYSCPV--CGLRFKRKDRMSYHVRSH   26 (32)
T ss_dssp             CCSSEETT--TTEECSCHHHHHHHHHHH
T ss_pred             CCCcccch--HHHHhhccccceEeeecc
Confidence            58999999  999999999999998643

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.85  E-value=0.0003  Score=43.76  Aligned_cols=28  Identities=32%  Similarity=0.570  Sum_probs=25.1

Q ss_pred             CCceecCccccCCcCCChhHHHhHHhhhc
Q 025436          129 YPMYECLVEGCGLKFKNYKSRQQHLVDKH  157 (253)
Q Consensus       129 ek~y~C~vegC~kkF~t~~~rk~Hl~~~H  157 (253)
                      ++||.|.++||+.+|.+-..|..|.. .|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~-KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKH-KH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHH-HH
T ss_pred             CCceecCCCCccccccchHHHHHhhh-hh
Confidence            78999999999999999999998864 44

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.75  E-value=0.00032  Score=40.86  Aligned_cols=28  Identities=25%  Similarity=0.553  Sum_probs=25.0

Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhcC
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      +||.|..|||++.|.+-..|.+|.+ .|.
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~-tht   28 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSL-THT   28 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHH-HHH
T ss_pred             CCcCcccccccccchhhhhhhhhhc-ccc
Confidence            5899999999999999999999986 554

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.53  E-value=0.00079  Score=37.97  Aligned_cols=25  Identities=28%  Similarity=0.497  Sum_probs=19.0

Q ss_pred             ceecCccccCCcCCChhHHHhHHhhhcC
Q 025436          131 MYECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       131 ~y~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      |.+|.+  |++-|+.+.+|+.||+ .|+
T Consensus         1 phkc~~--c~kcfsrkdklk~hmr-~ht   25 (26)
T d2dmda2           1 PHKCEV--CGKCFSRKDKLKTHMR-CHT   25 (26)
T ss_dssp             CCCBTT--TTBCCCCHHHHHHHGG-GCC
T ss_pred             CCccch--hhhHhcchhHHHHHhh-ccC
Confidence            467866  8888888888888885 554

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.45  E-value=0.0008  Score=38.98  Aligned_cols=25  Identities=20%  Similarity=0.497  Sum_probs=21.8

Q ss_pred             CcceEecCCCCCcccCChhHHHhhHhC
Q 025436           64 GRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        64 ~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      ++||.|.+  ||+.|+...+.++|..+
T Consensus         1 EkPf~C~~--CgrkFArsderkRH~ki   25 (28)
T d1a1ia3           1 EKPFACDI--CGRKFARSDERKRHTKI   25 (28)
T ss_dssp             CCCEECTT--TCCEESSHHHHHHHHGG
T ss_pred             CCCcccch--hhhhhhcchhhhhhhhh
Confidence            47899988  99999999999999864

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.45  E-value=0.0012  Score=38.49  Aligned_cols=29  Identities=21%  Similarity=0.489  Sum_probs=25.8

Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhcCCC
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKHKFP  160 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p  160 (253)
                      +||+|..  |.-+...+++|+.|++..|.-.
T Consensus         1 kpy~cqy--c~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQY--CEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSS--SSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccc--cccccccchhhhhhhhcccccC
Confidence            5899977  9999999999999999888643

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.34  E-value=0.001  Score=37.87  Aligned_cols=24  Identities=38%  Similarity=0.717  Sum_probs=22.3

Q ss_pred             ceecCccccCCcCCChhHHHhHHh
Q 025436          131 MYECLVEGCGLKFKNYKSRQQHLV  154 (253)
Q Consensus       131 ~y~C~vegC~kkF~t~~~rk~Hl~  154 (253)
                      +|.|.+|+||+.|+....|+.|.-
T Consensus         1 ~yvchfe~c~kafkkhnqlkvhqf   24 (28)
T d2j7ja1           1 MYVCHFENCGKAFKKHNQLKVHQF   24 (28)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHH
T ss_pred             CeEEEecCchHHHhhccceEEEee
Confidence            599999999999999999999975

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.25  E-value=0.00076  Score=38.74  Aligned_cols=21  Identities=24%  Similarity=0.452  Sum_probs=11.7

Q ss_pred             ccCCCCCccCCCchhhhhhhh
Q 025436           94 ASCSVCCRVYPTSRLLSIHVS  114 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~  114 (253)
                      ++|.+|||+|.....|++|..
T Consensus         3 hvc~ecgkaf~essklkrh~l   23 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQL   23 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGG
T ss_pred             chHHHHhHHHHHHHHHHHHhh
Confidence            345555555555555555543

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.15  E-value=0.0014  Score=37.13  Aligned_cols=20  Identities=20%  Similarity=0.612  Sum_probs=16.3

Q ss_pred             cCCCCCccCCCchhhhhhhh
Q 025436           95 SCSVCCRVYPTSRLLSIHVS  114 (253)
Q Consensus        95 ~Cs~C~ksF~s~~~L~~Hi~  114 (253)
                      .|+.|.+.|.++..|+.|.+
T Consensus         2 qcp~c~k~f~skyylkvhnr   21 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNR   21 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHH
T ss_pred             cCcchHHHHHHhHhhhhccc
Confidence            58888888888888888876

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.14  E-value=0.0012  Score=38.31  Aligned_cols=26  Identities=23%  Similarity=0.442  Sum_probs=23.0

Q ss_pred             cceEecCCCCCcccCChhHHHhhHhC
Q 025436           65 RRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        65 k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      +||.|...||.+.|.++..|.+|..+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~t   26 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLT   26 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHH
T ss_pred             CCcCcccccccccchhhhhhhhhhcc
Confidence            58999999999999999999999753

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.75  E-value=0.0025  Score=35.88  Aligned_cols=20  Identities=15%  Similarity=0.549  Sum_probs=10.1

Q ss_pred             EecCCCCCcccCChhHHHhhHh
Q 025436           68 CCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        68 ~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      .|++  |++.|+.+..|+.|++
T Consensus         3 kc~~--c~kcfsrkdklk~hmr   22 (26)
T d2dmda2           3 KCEV--CGKCFSRKDKLKTHMR   22 (26)
T ss_dssp             CBTT--TTBCCCCHHHHHHHGG
T ss_pred             ccch--hhhHhcchhHHHHHhh
Confidence            4444  5555555555555554

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.34  E-value=0.0031  Score=37.06  Aligned_cols=25  Identities=20%  Similarity=0.640  Sum_probs=20.9

Q ss_pred             CcceEecCCCCCcccCChhHHHhhHhC
Q 025436           64 GRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        64 ~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      ++||.|++  |++.|..+..+..|.+.
T Consensus         1 ekp~~cpi--c~qrfkrkdrmsyhvrs   25 (32)
T d2epqa1           1 EKPYSCPV--CGLRFKRKDRMSYHVRS   25 (32)
T ss_dssp             CCSSEETT--TTEECSCHHHHHHHHHH
T ss_pred             CCCcccch--HHHHhhccccceEeeec
Confidence            47889988  99999988888888864

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.25  E-value=0.005  Score=35.58  Aligned_cols=26  Identities=19%  Similarity=0.468  Sum_probs=21.8

Q ss_pred             eEecCCCCCcccCChhHHHhhHhCcC
Q 025436           67 VCCPIVGCNARMRSLEEFEDHYNARH   92 (253)
Q Consensus        67 f~C~~~gC~k~F~s~~~L~~H~~~~H   92 (253)
                      ..|.++||++.|++..-|..|....|
T Consensus         1 l~cdf~gc~kifsnrqylnhh~kyqh   26 (30)
T d2dlka1           1 MPCDFPGCGRIFSNRQYLNHHKKYQH   26 (30)
T ss_dssp             EECSSTTTCCEESSHHHHHHHHHHGG
T ss_pred             CCCCCCCchhhhccHHHHHhHHHHHH
Confidence            36999999999999999999976444

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.24  E-value=0.0063  Score=35.14  Aligned_cols=26  Identities=31%  Similarity=0.516  Sum_probs=22.3

Q ss_pred             ecCccccCCcCCChhHHHhHHhhhcC
Q 025436          133 ECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       133 ~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      .|.++|||+.|++...|..|.+-.|.
T Consensus         2 ~cdf~gc~kifsnrqylnhh~kyqh~   27 (30)
T d2dlka1           2 PCDFPGCGRIFSNRQYLNHHKKYQHI   27 (30)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHHHGGG
T ss_pred             CCCCCCchhhhccHHHHHhHHHHHHh
Confidence            59999999999999999999875553

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.18  E-value=0.0056  Score=35.24  Aligned_cols=22  Identities=18%  Similarity=0.335  Sum_probs=16.9

Q ss_pred             ccCCCCCccCCCchhhhhhhhh
Q 025436           94 ASCSVCCRVYPTSRLLSIHVSE  115 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~e  115 (253)
                      |+|..|+..-...+.|+.||+.
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRs   23 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRT   23 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHH
T ss_pred             ccccccCcccCCHHHHHHHHHH
Confidence            6788888888778888888763

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.82  E-value=0.0082  Score=37.77  Aligned_cols=26  Identities=23%  Similarity=0.425  Sum_probs=22.6

Q ss_pred             CCCcceEecCCCCCcccCChhHHHhhHh
Q 025436           62 EDGRRVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        62 ~~~k~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      +|.+||.|.+  |+|.|.....+.+|.-
T Consensus         1 TGiKPYeC~~--C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNI--CAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSS--SCCEESCHHHHHHHHH
T ss_pred             CCCCceeccc--hhhhhhhHHHHHHhhh
Confidence            4789999988  9999999999998873

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.69  E-value=0.01  Score=33.84  Aligned_cols=27  Identities=19%  Similarity=0.443  Sum_probs=24.4

Q ss_pred             ceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436          131 MYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       131 ~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      .|+|+.  |+.....+++|..|+++.|.|
T Consensus         2 k~qcph--c~tiiarksdlrvhlrnlhsy   28 (28)
T d2ct1a1           2 KFHCPH--CDTVIARKSDLGVHLRKQHSY   28 (28)
T ss_dssp             SEECSS--SSCEESSHHHHHHHHHHTSCC
T ss_pred             CccCCc--chhheeehhhhhHHhhhcccC
Confidence            489977  999999999999999998875

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.66  E-value=0.0093  Score=34.38  Aligned_cols=23  Identities=17%  Similarity=0.498  Sum_probs=18.9

Q ss_pred             ceEecCCCCCcccCChhHHHhhHhC
Q 025436           66 RVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        66 ~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      ||.|..  |+-+|.+..+|..||..
T Consensus         1 py~C~~--CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTY--CNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSS--SSCEESSHHHHHHHHHS
T ss_pred             Ccccce--eeeeEeeccchhHhhhh
Confidence            688877  88888888888888864

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.59  E-value=0.01  Score=32.96  Aligned_cols=25  Identities=32%  Similarity=0.689  Sum_probs=20.4

Q ss_pred             ceecCccccCCcCCChhHHHhHHhhhc
Q 025436          131 MYECLVEGCGLKFKNYKSRQQHLVDKH  157 (253)
Q Consensus       131 ~y~C~vegC~kkF~t~~~rk~Hl~~~H  157 (253)
                      ||+|.-  |...|....+|+.||+..|
T Consensus         2 pykcss--csqqfmqkkdlqshmiklh   26 (26)
T d2dlqa1           2 PYKCSS--CSQQFMQKKDLQSHMIKLH   26 (26)
T ss_dssp             SEECSS--SCCEESSHHHHHHHHHHTS
T ss_pred             CCcccH--HHHHHHHHHHHHHHHHhcC
Confidence            788855  9999999999999887655

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=94.58  E-value=0.0098  Score=35.00  Aligned_cols=27  Identities=22%  Similarity=0.336  Sum_probs=19.0

Q ss_pred             ceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436          131 MYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       131 ~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      ||.|.+  |++.|+...-+.+|....|.+
T Consensus         1 Pf~C~~--C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGL--CNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTT--TCCEESSHHHHHHHHTTTSCC
T ss_pred             Cccccc--ccchhhHHHHHHHHHHHHhcC
Confidence            577766  777777777777777666654

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.39  E-value=0.012  Score=33.33  Aligned_cols=23  Identities=13%  Similarity=0.382  Sum_probs=20.8

Q ss_pred             eEecCCCCCcccCChhHHHhhHh
Q 025436           67 VCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        67 f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      |.|.+.+|+++|..-..|+.|.-
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf   24 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQF   24 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEee
Confidence            78999999999999999999873

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.05  E-value=0.018  Score=34.42  Aligned_cols=32  Identities=19%  Similarity=0.454  Sum_probs=27.3

Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhcCCCCccc
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFE  164 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H~~p~~f~  164 (253)
                      +...|.+  ||+.|.....|++|.. .|...++|.
T Consensus         4 k~~~ce~--cgk~frdvyhlnrhkl-shs~ekpys   35 (35)
T d2epra1           4 KQVACEI--CGKIFRDVYHLNRHKL-SHSGEKPYS   35 (35)
T ss_dssp             CSEEETT--TTEEESSHHHHHHHGG-GSCSCCCCC
T ss_pred             hhhhHHH--HHHHHHHHHHHHhhhc-ccCCCCCCC
Confidence            4578955  9999999999999974 889999873

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.00  E-value=0.021  Score=32.96  Aligned_cols=29  Identities=24%  Similarity=0.623  Sum_probs=26.0

Q ss_pred             ceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436          131 MYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       131 ~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      -|.|.-.+|+..|++..+++.|.-+.|..
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfnrfhn~   30 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFNRFHNI   30 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHHHHTTT
T ss_pred             CccccCCCcceEEeehHHHHHHHhhhccC
Confidence            48999999999999999999999877753

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.95  E-value=0.016  Score=36.37  Aligned_cols=26  Identities=31%  Similarity=0.622  Sum_probs=22.7

Q ss_pred             cCCCceecCccccCCcCCChhHHHhHHh
Q 025436          127 RGYPMYECLVEGCGLKFKNYKSRQQHLV  154 (253)
Q Consensus       127 ~gek~y~C~vegC~kkF~t~~~rk~Hl~  154 (253)
                      +|-+||.|.+  |+++|.-..+..+|.-
T Consensus         1 TGiKPYeC~~--C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNI--CAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSS--SCCEESCHHHHHHHHH
T ss_pred             CCCCceeccc--hhhhhhhHHHHHHhhh
Confidence            3678999977  9999999999999963

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.77  E-value=0.016  Score=32.15  Aligned_cols=23  Identities=13%  Similarity=0.403  Sum_probs=17.9

Q ss_pred             ceEecCCCCCcccCChhHHHhhHhC
Q 025436           66 RVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        66 ~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      ||.|.-  |.+.|..+.+|..||-.
T Consensus         2 pykcss--csqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSS--CSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSS--SCCEESSHHHHHHHHHH
T ss_pred             CCcccH--HHHHHHHHHHHHHHHHh
Confidence            688866  88888888888888743

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.73  E-value=0.023  Score=32.51  Aligned_cols=28  Identities=21%  Similarity=0.361  Sum_probs=24.1

Q ss_pred             CCceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436          129 YPMYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       129 ek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      ++||+|.+  |...-.+++.|..|++ .|++
T Consensus         1 erpfkcql--csy~srnssqltvhlr-~htg   28 (29)
T d2dmda3           1 ERPFKCQI--CPYASRNSSQLTVHLR-SHTG   28 (29)
T ss_dssp             CCCEECSS--SSCEESSHHHHHHHHT-TCCS
T ss_pred             CCcceeee--cccccCCchheEEeee-cccC
Confidence            57999988  9999999999999996 5553

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.66  E-value=0.026  Score=32.15  Aligned_cols=25  Identities=24%  Similarity=0.409  Sum_probs=21.3

Q ss_pred             eecCccccCCcCCChhHHHhHHhhhcCC
Q 025436          132 YECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       132 y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      ..|..  ||+.|..+++|++|.. +|+.
T Consensus         3 hvc~e--cgkaf~essklkrh~l-vhtg   27 (28)
T d1ubdc2           3 HVCAE--CGKAFVESSKLKRHQL-VHTG   27 (28)
T ss_dssp             EECTT--TCCEESSHHHHHHHGG-GTSC
T ss_pred             chHHH--HhHHHHHHHHHHHHhh-cccC
Confidence            57955  9999999999999985 7764

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.55  E-value=0.024  Score=32.37  Aligned_cols=26  Identities=27%  Similarity=0.606  Sum_probs=22.6

Q ss_pred             eecCccccCCcCCChhHHHhHHhhhcC
Q 025436          132 YECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       132 y~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      ..|+..||.+.|...+.++.||- +|+
T Consensus         2 i~CphkgC~K~Frd~saMRKHlh-tHG   27 (28)
T d1ubdc1           2 IACPHKGCTKMFRDNSAMRKHLH-THG   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHG-GGS
T ss_pred             ccCCcccHHHHhhchHHHHHHhh-ccC
Confidence            47999999999999999999984 553

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=93.42  E-value=0.033  Score=32.65  Aligned_cols=25  Identities=20%  Similarity=0.365  Sum_probs=11.9

Q ss_pred             ceEecCCCCCcccCChhHHHhhHhCcC
Q 025436           66 RVCCPIVGCNARMRSLEEFEDHYNARH   92 (253)
Q Consensus        66 ~f~C~~~gC~k~F~s~~~L~~H~~~~H   92 (253)
                      ||.|.+  |+..|+...-|.+|.+..|
T Consensus         1 Pf~C~~--C~R~FaRrDLlLRH~qKlH   25 (31)
T d2adra2           1 PYPCGL--CNRAFTRRDLLIRHAQKIH   25 (31)
T ss_dssp             SEECTT--TCCEESSHHHHHHHHTTTS
T ss_pred             Cccccc--ccchhhHHHHHHHHHHHHh
Confidence            344444  5555554444444444444

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.28  E-value=0.03  Score=32.03  Aligned_cols=25  Identities=24%  Similarity=0.452  Sum_probs=21.8

Q ss_pred             CcceEecCCCCCcccCChhHHHhhHhC
Q 025436           64 GRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        64 ~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      ++||+|++  |..+-.....|..|.+.
T Consensus         1 erpfkcql--csy~srnssqltvhlr~   25 (29)
T d2dmda3           1 ERPFKCQI--CPYASRNSSQLTVHLRS   25 (29)
T ss_dssp             CCCEECSS--SSCEESSHHHHHHHHTT
T ss_pred             CCcceeee--cccccCCchheEEeeec
Confidence            47899999  99999999999999875

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.09  E-value=0.023  Score=34.10  Aligned_cols=28  Identities=25%  Similarity=0.415  Sum_probs=24.1

Q ss_pred             ceecCccccCCc---CCChhHHHhHHhhhcCC
Q 025436          131 MYECLVEGCGLK---FKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       131 ~y~C~vegC~kk---F~t~~~rk~Hl~~~H~~  159 (253)
                      -|.|..+||.+.   |...+.|..||+ .|++
T Consensus         2 ~y~C~W~~C~R~~~pf~a~YkLv~H~R-~HTg   32 (33)
T d2glia2           2 EFVCHWGGCSRELRPFKAQYMLVVHMR-RHTG   32 (33)
T ss_dssp             CCCCCBTTCTTTTCCCSSHHHHHHHTH-HHHC
T ss_pred             CeEEECCCCCCCCCcchhHHHHHHHHh-hcCC
Confidence            589999999876   999999999996 6764

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.82  E-value=0.018  Score=35.44  Aligned_cols=22  Identities=27%  Similarity=0.631  Sum_probs=14.5

Q ss_pred             cccCCCCCccCCCchhhhhhhh
Q 025436           93 TASCSVCCRVYPTSRLLSIHVS  114 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~  114 (253)
                      .|.|.+|++.|++...|--|+.
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~   26 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMN   26 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHH
T ss_pred             ccCCCCCCCccCCcccccchHh
Confidence            3666666666666666666664

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.72  E-value=0.036  Score=30.81  Aligned_cols=25  Identities=28%  Similarity=0.483  Sum_probs=20.4

Q ss_pred             eecCccccCCcCCChhHHHhHHhhhcC
Q 025436          132 YECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       132 y~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      |.|++  |=+.|+.+.++..|++.+|+
T Consensus         2 ypcp~--cfkeftrkdnm~ahvkiihk   26 (26)
T d2drpa2           2 YPCPF--CFKEFTRKDNMTAHVKIIHK   26 (26)
T ss_dssp             EECTT--TCCEESCHHHHHHHHHHHTC
T ss_pred             cCCch--hhHHhccccCceEEEEEecC
Confidence            77877  88888888888888877774

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.67  E-value=0.039  Score=31.66  Aligned_cols=23  Identities=26%  Similarity=0.641  Sum_probs=17.5

Q ss_pred             ceecCccccCCcCCChhHHHhHHhh
Q 025436          131 MYECLVEGCGLKFKNYKSRQQHLVD  155 (253)
Q Consensus       131 ~y~C~vegC~kkF~t~~~rk~Hl~~  155 (253)
                      ||.|..  |.-.|.+..+|..||..
T Consensus         1 py~C~~--CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTY--CNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSS--SSCEESSHHHHHHHHHS
T ss_pred             Ccccce--eeeeEeeccchhHhhhh
Confidence            577866  88888888888888764

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.61  E-value=0.026  Score=32.94  Aligned_cols=24  Identities=21%  Similarity=0.494  Sum_probs=19.1

Q ss_pred             cceEecCCCCCcccCChhHHHhhH
Q 025436           65 RRVCCPIVGCNARMRSLEEFEDHY   88 (253)
Q Consensus        65 k~f~C~~~gC~k~F~s~~~L~~H~   88 (253)
                      +.|.|++++|+..|.....|+.|.
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHL   25 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHL   25 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHH
T ss_pred             CceEeeCCCcchhhccchhhhHHh
Confidence            457888888888888888888876

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.61  E-value=0.039  Score=31.43  Aligned_cols=24  Identities=25%  Similarity=0.689  Sum_probs=22.0

Q ss_pred             eEecCCCCCcccCChhHHHhhHhC
Q 025436           67 VCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        67 f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      +.|+..||++.|.....+..|+.+
T Consensus         2 i~CphkgC~K~Frd~saMRKHlht   25 (28)
T d1ubdc1           2 IACPHKGCTKMFRDNSAMRKHLHT   25 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHGG
T ss_pred             ccCCcccHHHHhhchHHHHHHhhc
Confidence            579999999999999999999965

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.43  E-value=0.031  Score=32.28  Aligned_cols=29  Identities=24%  Similarity=0.634  Sum_probs=24.9

Q ss_pred             cceEecCCCCCcccCChhHHHhhHhCcCc
Q 025436           65 RRVCCPIVGCNARMRSLEEFEDHYNARHT   93 (253)
Q Consensus        65 k~f~C~~~gC~k~F~s~~~L~~H~~~~H~   93 (253)
                      +.|.|.-.+|+-.|.++.+++.|.+..|.
T Consensus         1 knf~cdsd~cdl~fttkanmkkhfnrfhn   29 (31)
T d1tf3a3           1 KNFTCDSDGCDLRFTTKANMKKHFNRFHN   29 (31)
T ss_dssp             CCEECSSSSCCCEESSHHHHHHHHHHHTT
T ss_pred             CCccccCCCcceEEeehHHHHHHHhhhcc
Confidence            35899999999999999999999986553

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.19  E-value=0.049  Score=30.56  Aligned_cols=25  Identities=32%  Similarity=0.349  Sum_probs=21.3

Q ss_pred             ecCccccCCcCCChhHHHhHHhhhcCCC
Q 025436          133 ECLVEGCGLKFKNYKSRQQHLVDKHKFP  160 (253)
Q Consensus       133 ~C~vegC~kkF~t~~~rk~Hl~~~H~~p  160 (253)
                      +|+.  |.+.|.+...|+.|-+ .|.+.
T Consensus         2 qcp~--c~k~f~skyylkvhnr-~htge   26 (27)
T d2dlqa4           2 ECPT--CHKKFLSKYYLKVHNR-KHTGE   26 (27)
T ss_dssp             CCTT--TCCCCSSHHHHHHHHH-HHSSC
T ss_pred             cCcc--hHHHHHHhHhhhhccc-cccCC
Confidence            6977  9999999999999985 56654

>d1x3ca1 g.37.1.1 (A:8-68) Zinc finger protein 292, ZNF292 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 292, ZNF292
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.16  E-value=0.034  Score=36.81  Aligned_cols=31  Identities=29%  Similarity=0.384  Sum_probs=28.3

Q ss_pred             CCCcceEecCCCCCcccCChhHHHhhHhCcC
Q 025436           62 EDGRRVCCPIVGCNARMRSLEEFEDHYNARH   92 (253)
Q Consensus        62 ~~~k~f~C~~~gC~k~F~s~~~L~~H~~~~H   92 (253)
                      +..+||.|-+.||..+|.-..+|..||+..|
T Consensus        16 spyrpyrcvhqgc~aaftiq~nlilhy~avh   46 (61)
T d1x3ca1          16 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVH   46 (61)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHS
T ss_pred             CCCCceeeeccchhhhhhhhhhHHHHHHHHh
Confidence            5678999999999999999999999998766

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.13  E-value=0.026  Score=32.57  Aligned_cols=26  Identities=19%  Similarity=0.520  Sum_probs=15.5

Q ss_pred             cceEecCCCCCcccCChhHHHhhHhCcC
Q 025436           65 RRVCCPIVGCNARMRSLEEFEDHYNARH   92 (253)
Q Consensus        65 k~f~C~~~gC~k~F~s~~~L~~H~~~~H   92 (253)
                      +||+|+.  |...-+...+|+.|+.+.|
T Consensus         1 kpy~cqy--c~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQY--CEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSS--SSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccc--cccccccchhhhhhhhccc
Confidence            3566665  6666666666666665433

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.11  E-value=0.054  Score=30.68  Aligned_cols=26  Identities=27%  Similarity=0.494  Sum_probs=23.0

Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhcC
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      +||+|..  |+..-..+++|+.|++ +|.
T Consensus         2 kp~kck~--cdyaaadsssl~kh~r-ihs   27 (28)
T d2dmda1           2 KPYKCKT--CDYAAADSSSLNKHLR-IHS   27 (28)
T ss_dssp             CSEECSS--SCCEESSHHHHHHHHH-HSC
T ss_pred             CCccccc--ccchhcchhhHhhhhh-ccc
Confidence            6999977  9999999999999985 774

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=91.77  E-value=0.046  Score=30.24  Aligned_cols=21  Identities=29%  Similarity=0.537  Sum_probs=13.6

Q ss_pred             ccCCCCCccCCCchhhhhhhh
Q 025436           94 ASCSVCCRVYPTSRLLSIHVS  114 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~  114 (253)
                      |.|..|.++|..+..|.+|.+
T Consensus         1 ykcglcersfveksalsrhqr   21 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQR   21 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGG
T ss_pred             CcccchHHHHHHHHHHHHHHH
Confidence            456666666666666666664

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.77  E-value=0.031  Score=32.10  Aligned_cols=21  Identities=29%  Similarity=0.608  Sum_probs=12.6

Q ss_pred             ccCCCCCccCCCchhhhhhhh
Q 025436           94 ASCSVCCRVYPTSRLLSIHVS  114 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~  114 (253)
                      |.|+.|...|...-.|.+|+-
T Consensus         5 ftcs~cqe~f~rrmelr~hmv   25 (30)
T d2dlqa3           5 FTCSVCQETFRRRMELRLHMV   25 (30)
T ss_dssp             EECSSSCCEESSHHHHHHHHH
T ss_pred             EEeHHHHHHHHHHHhheeeee
Confidence            556666666666666666653

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=91.49  E-value=0.074  Score=29.39  Aligned_cols=24  Identities=29%  Similarity=0.573  Sum_probs=21.4

Q ss_pred             eecCccccCCcCCChhHHHhHHhhhcC
Q 025436          132 YECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       132 y~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      |+|-+  |.++|..++.|.+|.+ +|+
T Consensus         1 ykcgl--cersfveksalsrhqr-vhk   24 (26)
T d1znfa_           1 YKCGL--CERSFVEKSALSRHQR-VHK   24 (26)
T ss_dssp             CBCSS--SCCBCSSHHHHHHHGG-GTC
T ss_pred             Ccccc--hHHHHHHHHHHHHHHH-hhc
Confidence            78988  9999999999999985 664

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.74  E-value=0.071  Score=30.17  Aligned_cols=27  Identities=19%  Similarity=0.546  Sum_probs=21.9

Q ss_pred             ceEecCCCCCcccCChhHHHhhHhCcCcc
Q 025436           66 RVCCPIVGCNARMRSLEEFEDHYNARHTA   94 (253)
Q Consensus        66 ~f~C~~~gC~k~F~s~~~L~~H~~~~H~~   94 (253)
                      .|+|++  |+-..+.+++|..|++..|+|
T Consensus         2 k~qcph--c~tiiarksdlrvhlrnlhsy   28 (28)
T d2ct1a1           2 KFHCPH--CDTVIARKSDLGVHLRKQHSY   28 (28)
T ss_dssp             SEECSS--SSCEESSHHHHHHHHHHTSCC
T ss_pred             CccCCc--chhheeehhhhhHHhhhcccC
Confidence            378877  999999999999998776654

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.08  E-value=0.042  Score=33.05  Aligned_cols=22  Identities=18%  Similarity=0.507  Sum_probs=17.3

Q ss_pred             cccCCCCCccCCCchhhhhhhh
Q 025436           93 TASCSVCCRVYPTSRLLSIHVS  114 (253)
Q Consensus        93 ~~~Cs~C~ksF~s~~~L~~Hi~  114 (253)
                      .|+|+.|+|.|.....+.+|-.
T Consensus         4 afvcskcgktftrrntm~rha~   25 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHAD   25 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHH
T ss_pred             eeeecccccchhcchHHHHHhh
Confidence            3788888888888888877764

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.57  E-value=0.13  Score=31.45  Aligned_cols=27  Identities=22%  Similarity=0.513  Sum_probs=23.3

Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      +.|.|.+  |++.|.+...|==|+. .|..
T Consensus         4 r~~~C~~--C~k~F~s~qALGGH~~-~Hr~   30 (37)
T d1njqa_           4 RSYTCSF--CKREFRSAQALGGHMN-VHRR   30 (37)
T ss_dssp             SSEECTT--TCCEESSHHHHHHHHH-TTCC
T ss_pred             CccCCCC--CCCccCCcccccchHh-hhcc
Confidence            5699988  9999999999999984 6653

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.42  E-value=0.15  Score=29.05  Aligned_cols=26  Identities=27%  Similarity=0.517  Sum_probs=22.2

Q ss_pred             eecCccccCCcCCChhHHHhHHhhhcCCC
Q 025436          132 YECLVEGCGLKFKNYKSRQQHLVDKHKFP  160 (253)
Q Consensus       132 y~C~vegC~kkF~t~~~rk~Hl~~~H~~p  160 (253)
                      |.|..  ||...+-++-|+.|++ .|+..
T Consensus         2 YvC~~--Cg~~C~KPSvL~KHIR-sHT~~   27 (28)
T d1bboa1           2 YICEE--CGIRAKKPSMLKKHIR-THTDV   27 (28)
T ss_dssp             CBCTT--TCCBCSSHHHHHHHHH-HTSSC
T ss_pred             ccccc--cCcccCCHHHHHHHHH-HhcCC
Confidence            89966  9999999999999985 77653

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.52  E-value=0.2  Score=28.59  Aligned_cols=28  Identities=25%  Similarity=0.503  Sum_probs=23.7

Q ss_pred             CCceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436          129 YPMYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       129 ek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      +.-|.|.+  |...|...-.|+.||+ .|.+
T Consensus         2 eqvftcs~--cqe~f~rrmelr~hmv-shtg   29 (30)
T d2dlqa3           2 EQVFTCSV--CQETFRRRMELRLHMV-SHTG   29 (30)
T ss_dssp             CCCEECSS--SCCEESSHHHHHHHHH-HHSS
T ss_pred             cceEEeHH--HHHHHHHHHhheeeee-cccC
Confidence            45699999  9999999999999997 4543

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.46  E-value=0.16  Score=28.67  Aligned_cols=25  Identities=12%  Similarity=0.298  Sum_probs=21.0

Q ss_pred             CcceEecCCCCCcccCChhHHHhhHhC
Q 025436           64 GRRVCCPIVGCNARMRSLEEFEDHYNA   90 (253)
Q Consensus        64 ~k~f~C~~~gC~k~F~s~~~L~~H~~~   90 (253)
                      .+||+|..  |+.+-.....|+.|.++
T Consensus         1 vkp~kck~--cdyaaadsssl~kh~ri   25 (28)
T d2dmda1           1 VKPYKCKT--CDYAAADSSSLNKHLRI   25 (28)
T ss_dssp             CCSEECSS--SCCEESSHHHHHHHHHH
T ss_pred             CCCccccc--ccchhcchhhHhhhhhc
Confidence            37889987  99999999999999874

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.40  E-value=0.17  Score=28.90  Aligned_cols=27  Identities=19%  Similarity=0.410  Sum_probs=21.6

Q ss_pred             CceecCccccCCcCCChhHHHhHHhhhcC
Q 025436          130 PMYECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       130 k~y~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      +||+|.+  |.---+.+++|..|++..|.
T Consensus         1 rPFkC~~--CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNY--CSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSS--SSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccce--ecccccCcchHHHHHHHHcc
Confidence            4788866  88888888888888877775

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.17  E-value=0.083  Score=31.57  Aligned_cols=24  Identities=17%  Similarity=0.358  Sum_probs=15.9

Q ss_pred             ceEecCCCCC---cccCChhHHHhhHh
Q 025436           66 RVCCPIVGCN---ARMRSLEEFEDHYN   89 (253)
Q Consensus        66 ~f~C~~~gC~---k~F~s~~~L~~H~~   89 (253)
                      .|.|...||.   +.|.....|..||+
T Consensus         2 ~y~C~W~~C~R~~~pf~a~YkLv~H~R   28 (33)
T d2glia2           2 EFVCHWGGCSRELRPFKAQYMLVVHMR   28 (33)
T ss_dssp             CCCCCBTTCTTTTCCCSSHHHHHHHTH
T ss_pred             CeEEECCCCCCCCCcchhHHHHHHHHh
Confidence            4677777774   34666677777665

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.02  E-value=0.12  Score=33.31  Aligned_cols=21  Identities=24%  Similarity=0.635  Sum_probs=16.8

Q ss_pred             ccCCCCCccCCCchhhhhhhh
Q 025436           94 ASCSVCCRVYPTSRLLSIHVS  114 (253)
Q Consensus        94 ~~Cs~C~ksF~s~~~L~~Hi~  114 (253)
                      |.|..|+|.|+....|..|.-
T Consensus         7 ~pCG~CgK~Ftd~~rLr~HEA   27 (53)
T d2eppa1           7 LPCGLCGKVFTDANRLRQHEA   27 (53)
T ss_dssp             CCCTTTCCCCSCHHHHHHHHH
T ss_pred             eeccccccccCCHHHHhHhHH
Confidence            678888888888888888863

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.27  E-value=0.27  Score=28.08  Aligned_cols=26  Identities=23%  Similarity=0.703  Sum_probs=22.8

Q ss_pred             ceecCccccCCcCCChhHHHhHHhhhcC
Q 025436          131 MYECLVEGCGLKFKNYKSRQQHLVDKHK  158 (253)
Q Consensus       131 ~y~C~vegC~kkF~t~~~rk~Hl~~~H~  158 (253)
                      +|.|..  ||+...+...++.|+...|+
T Consensus         2 ~ftc~h--cgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           2 MFTCHH--CGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCCSS--SCCCCSSHHHHHHHHHHHTC
T ss_pred             ceechh--HHHHHhhccCceEEEeeccc
Confidence            789977  99999999999999987775

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=86.08  E-value=0.17  Score=28.00  Aligned_cols=24  Identities=21%  Similarity=0.510  Sum_probs=15.6

Q ss_pred             eEecCCCCCcccCChhHHHhhHhCcC
Q 025436           67 VCCPIVGCNARMRSLEEFEDHYNARH   92 (253)
Q Consensus        67 f~C~~~gC~k~F~s~~~L~~H~~~~H   92 (253)
                      |.|++  |-+.|..+.++..|....|
T Consensus         2 ypcp~--cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPF--CFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTT--TCCEESCHHHHHHHHHHHT
T ss_pred             cCCch--hhHHhccccCceEEEEEec
Confidence            56666  7777777777776665444

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.66  E-value=0.18  Score=28.85  Aligned_cols=22  Identities=14%  Similarity=0.403  Sum_probs=11.0

Q ss_pred             ceEecCCCCCcccCChhHHHhhHh
Q 025436           66 RVCCPIVGCNARMRSLEEFEDHYN   89 (253)
Q Consensus        66 ~f~C~~~gC~k~F~s~~~L~~H~~   89 (253)
                      ||+|..  |.---....+|..|+.
T Consensus         2 PFkC~~--CsFDtkq~SnL~kH~k   23 (29)
T d1x5wa2           2 PFKCNY--CSFDTKQPSNLSKHMK   23 (29)
T ss_dssp             SEECSS--SSCEESSHHHHHHHHH
T ss_pred             Ccccce--ecccccCcchHHHHHH
Confidence            455554  5444444555555543

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.31  E-value=0.19  Score=34.04  Aligned_cols=38  Identities=21%  Similarity=0.566  Sum_probs=28.1

Q ss_pred             CCCcceEecCCCCCcccCChhHHHhhHhC-cCcccCCCCCcc
Q 025436           62 EDGRRVCCPIVGCNARMRSLEEFEDHYNA-RHTASCSVCCRV  102 (253)
Q Consensus        62 ~~~k~f~C~~~gC~k~F~s~~~L~~H~~~-~H~~~Cs~C~ks  102 (253)
                      +....|.|+.  |++.|+.+..+.. +.. .-.|.|+.|+-.
T Consensus        10 ~~~~~y~Cp~--C~~~ys~Lda~~L-~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          10 TNRASFKCPV--CSSTFTDLEANQL-FDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             CSSSEEECSS--SCCEEEHHHHHHH-EETTTTEEBCSSSCCB
T ss_pred             ccCCceECCC--CCCCcchhhHHHh-cCcCCCeEEecCCCCE
Confidence            3456899977  9999999888766 322 235999999854

>d2glia1 g.37.1.1 (A:103-134) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.23  E-value=0.22  Score=29.26  Aligned_cols=25  Identities=32%  Similarity=0.616  Sum_probs=21.4

Q ss_pred             EecCCCCCcccCChhHHHhhHhCcC
Q 025436           68 CCPIVGCNARMRSLEEFEDHYNARH   92 (253)
Q Consensus        68 ~C~~~gC~k~F~s~~~L~~H~~~~H   92 (253)
                      .|...+|+..|.+...|-.|++.-|
T Consensus         3 nChW~~C~~eFdtQd~LV~HinndH   27 (32)
T d2glia1           3 DCRWDGCSQEFDSQEQLVHHINSEH   27 (32)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHHHT
T ss_pred             cccccccccccCCHHHHHHHccccc
Confidence            4888899999999999999997543

>d1x3ca1 g.37.1.1 (A:8-68) Zinc finger protein 292, ZNF292 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 292, ZNF292
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.68  E-value=0.42  Score=31.35  Aligned_cols=31  Identities=29%  Similarity=0.487  Sum_probs=28.5

Q ss_pred             CCceecCccccCCcCCChhHHHhHHhhhcCC
Q 025436          129 YPMYECLVEGCGLKFKNYKSRQQHLVDKHKF  159 (253)
Q Consensus       129 ek~y~C~vegC~kkF~t~~~rk~Hl~~~H~~  159 (253)
                      -+||.|..+||-..|+...+|..|-+.+|.-
T Consensus        18 yrpyrcvhqgc~aaftiq~nlilhy~avh~s   48 (61)
T d1x3ca1          18 YRPYRCVHQGCFAAFTIQQNLILHYQAVHKS   48 (61)
T ss_dssp             SCSCBCCSTTCCCBCSSHHHHHHHHHHHSSS
T ss_pred             CCceeeeccchhhhhhhhhhHHHHHHHHhhh
Confidence            5799999999999999999999999888864

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=82.63  E-value=0.44  Score=26.70  Aligned_cols=22  Identities=23%  Similarity=0.460  Sum_probs=16.6

Q ss_pred             ceecCccccCCcCCChhHHHhHHh
Q 025436          131 MYECLVEGCGLKFKNYKSRQQHLV  154 (253)
Q Consensus       131 ~y~C~vegC~kkF~t~~~rk~Hl~  154 (253)
                      ||+|..  ||+.+..+.+|..|..
T Consensus         1 pf~c~k--cgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPK--CGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTT--TCCBCSSHHHHHHHHH
T ss_pred             CCcccc--chhhhhhHhHHHHHHH
Confidence            577866  8888888888877764

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=82.20  E-value=0.38  Score=27.84  Aligned_cols=24  Identities=29%  Similarity=0.566  Sum_probs=15.2

Q ss_pred             ceecCccccCCcCCChhHHHhHHh
Q 025436          131 MYECLVEGCGLKFKNYKSRQQHLV  154 (253)
Q Consensus       131 ~y~C~vegC~kkF~t~~~rk~Hl~  154 (253)
                      .|-|.+.+|+-.|.....|..|+-
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLc   26 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLS   26 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHH
T ss_pred             ceEeeCCCcchhhccchhhhHHhh
Confidence            366666666666666666666664